Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:25:48 (8519): wrapper (7.7.26015): starting
19:25:48 (8519): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 19:25:48] Arguments: --nthreads 8
[2025-05-28 19:25:48] Threads: 8
[2025-05-28 19:25:48] Checking for CVMFS
[2025-05-28 19:25:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 19:25:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 19:25:48] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 19:25:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 19:25:49] 2.11.2.0 1855 23432 94968 146526 1 59 21275978 25165825 1158 130560 0 13131855 99.804 14297955 1802 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 19:25:49] CVMFS is ok
[2025-05-28 19:25:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 19:25:49] Checking for apptainer binary...
[2025-05-28 19:25:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 19:25:49] Running /usr/bin/apptainer --version
[2025-05-28 19:25:49] apptainer version 1.3.2-1.el7
[2025-05-28 19:25:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 19:25:51] cg-vwn348.simple-grid.lan
[2025-05-28 19:25:51] apptainer works
[2025-05-28 19:25:51] Set ATHENA_PROC_NUMBER=8
[2025-05-28 19:25:51] Set ATHENA_CORE_NUMBER=8
[2025-05-28 19:25:51] Starting ATLAS job with PandaID=6667885113
[2025-05-28 19:25:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 23:46:23]  *** The last 200 lines of the pilot log: ***
[2025-05-28 23:46:23] 2025-05-28 21:44:50,457 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 23:46:23] 2025-05-28 21:44:50,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:46:23] 2025-05-28 21:44:50,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:46:23] 2025-05-28 21:44:50,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:46:23] 2025-05-28 21:44:50,463 | INFO     | fitting pss+swap vs Time
[2025-05-28 23:46:23] 2025-05-28 21:44:50,464 | INFO     | sum of square deviations: 5021496942.0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,466 | INFO     | sum of deviations: -47732089043.00002
[2025-05-28 23:46:23] 2025-05-28 21:44:50,466 | INFO     | mean x: 1748460898.0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,466 | INFO     | mean y: 2492667.371541502
[2025-05-28 23:46:23] 2025-05-28 21:44:50,466 | INFO     | -- intersect: 16622574733.63675
[2025-05-28 23:46:23] 2025-05-28 21:44:50,466 | INFO     | intersect: 16622574733.63675
[2025-05-28 23:46:23] 2025-05-28 21:44:50,467 | INFO     | chi2: 3.35665364514848
[2025-05-28 23:46:23] 2025-05-28 21:44:50,467 | INFO     | sum of square deviations: 4729621702.0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,469 | INFO     | sum of deviations: -12579674004.000006
[2025-05-28 23:46:23] 2025-05-28 21:44:50,469 | INFO     | mean x: 1748460745.5
[2025-05-28 23:46:23] 2025-05-28 21:44:50,470 | INFO     | mean y: 2510821.5161290322
[2025-05-28 23:46:23] 2025-05-28 21:44:50,470 | INFO     | -- intersect: 4653002461.868642
[2025-05-28 23:46:23] 2025-05-28 21:44:50,470 | INFO     | intersect: 4653002461.868642
[2025-05-28 23:46:23] 2025-05-28 21:44:50,470 | INFO     | chi2: 1.7132125432471632
[2025-05-28 23:46:23] 2025-05-28 21:44:50,470 | INFO     | current chi2=1.7132125432471632 (change=48.96069942386385 %)
[2025-05-28 23:46:23] 2025-05-28 21:44:50,471 | INFO     | sum of square deviations: 4449281562.0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,473 | INFO     | sum of deviations: -12127749769.99999
[2025-05-28 23:46:23] 2025-05-28 21:44:50,473 | INFO     | mean x: 1748460593.0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,473 | INFO     | mean y: 2511067.3991769548
[2025-05-28 23:46:23] 2025-05-28 21:44:50,473 | INFO     | -- intersect: 4768424902.952881
[2025-05-28 23:46:23] 2025-05-28 21:44:50,473 | INFO     | intersect: 4768424902.952881
[2025-05-28 23:46:23] 2025-05-28 21:44:50,474 | INFO     | chi2: 1.7127425636904
[2025-05-28 23:46:23] 2025-05-28 21:44:50,474 | INFO     | current chi2=1.7127425636904 (change=0.027432647432788962 %)
[2025-05-28 23:46:23] 2025-05-28 21:44:50,474 | INFO     | right removable region: 242
[2025-05-28 23:46:23] 2025-05-28 21:44:50,474 | INFO     | sum of square deviations: 4729621702.0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,476 | INFO     | sum of deviations: -86318067110.5
[2025-05-28 23:46:23] 2025-05-28 21:44:50,477 | INFO     | mean x: 1748461050.5
[2025-05-28 23:46:23] 2025-05-28 21:44:50,477 | INFO     | mean y: 2512650.2620967743
[2025-05-28 23:46:23] 2025-05-28 21:44:50,477 | INFO     | -- intersect: 31912840326.856964
[2025-05-28 23:46:23] 2025-05-28 21:44:50,477 | INFO     | intersect: 31912840326.856964
[2025-05-28 23:46:23] 2025-05-28 21:44:50,477 | INFO     | chi2: 1.9133697962409433
[2025-05-28 23:46:23] 2025-05-28 21:44:50,478 | INFO     | current chi2=1.9133697962409433 (change=42.99769953905071 %)
[2025-05-28 23:46:23] 2025-05-28 21:44:50,478 | INFO     | sum of square deviations: 4449281562.0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,480 | INFO     | sum of deviations: -85648971621.99998
[2025-05-28 23:46:23] 2025-05-28 21:44:50,480 | INFO     | mean x: 1748461203.0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,480 | INFO     | mean y: 2512257.3703703703
[2025-05-28 23:46:23] 2025-05-28 21:44:50,480 | INFO     | -- intersect: 33660508918.43107
[2025-05-28 23:46:23] 2025-05-28 21:44:50,481 | INFO     | intersect: 33660508918.43107
[2025-05-28 23:46:23] 2025-05-28 21:44:50,481 | INFO     | chi2: 1.8948158610252193
[2025-05-28 23:46:23] 2025-05-28 21:44:50,481 | INFO     | current chi2=1.8948158610252193 (change=0.9696993885957418 %)
[2025-05-28 23:46:23] 2025-05-28 21:44:50,481 | INFO     | left removable region: 20
[2025-05-28 23:46:23] 2025-05-28 21:44:50,482 | INFO     | sum of square deviations: 3392567795.5
[2025-05-28 23:46:23] 2025-05-28 21:44:50,483 | INFO     | sum of deviations: -34123754715.0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,484 | INFO     | mean x: 1748461172.5
[2025-05-28 23:46:23] 2025-05-28 21:44:50,484 | INFO     | mean y: 2522477.1441441444
[2025-05-28 23:46:23] 2025-05-28 21:44:50,484 | INFO     | -- intersect: 17589218978.31103
[2025-05-28 23:46:23] 2025-05-28 21:44:50,484 | INFO     | intersect: 17589218978.31103
[2025-05-28 23:46:23] 2025-05-28 21:44:50,484 | INFO     | chi2: 0.17456857661785802
[2025-05-28 23:46:23] 2025-05-28 21:44:50,484 | INFO     | -- intersect: 17589218978.31103
[2025-05-28 23:46:23] 2025-05-28 21:44:50,484 | INFO     | current memory leak: -10.06 B/s (using 222 data points, chi2=0.17)
[2025-05-28 23:46:23] 2025-05-28 21:44:50,485 | INFO     | ..............................
[2025-05-28 23:46:23] 2025-05-28 21:44:50,485 | INFO     | . Timing measurements:
[2025-05-28 23:46:23] 2025-05-28 21:44:50,485 | INFO     | . get job = 0 s
[2025-05-28 23:46:23] 2025-05-28 21:44:50,486 | INFO     | . initial setup = 2 s
[2025-05-28 23:46:23] 2025-05-28 21:44:50,486 | INFO     | . payload setup = 13 s
[2025-05-28 23:46:23] 2025-05-28 21:44:50,486 | INFO     | . stage-in = 0 s
[2025-05-28 23:46:23] 2025-05-28 21:44:50,486 | INFO     | . payload execution = 15384 s
[2025-05-28 23:46:23] 2025-05-28 21:44:50,486 | INFO     | . stage-out = 3 s
[2025-05-28 23:46:23] 2025-05-28 21:44:50,486 | INFO     | . log creation = 1 s
[2025-05-28 23:46:23] 2025-05-28 21:44:50,486 | INFO     | ..............................
[2025-05-28 23:46:23] 2025-05-28 21:44:50,614 | INFO     | 
[2025-05-28 23:46:23] 2025-05-28 21:44:50,614 | INFO     | job summary report
[2025-05-28 23:46:23] 2025-05-28 21:44:50,614 | INFO     | --------------------------------------------------
[2025-05-28 23:46:23] 2025-05-28 21:44:50,614 | INFO     | PanDA job id: 6667885113
[2025-05-28 23:46:23] 2025-05-28 21:44:50,614 | INFO     | task id: 44871837
[2025-05-28 23:46:23] 2025-05-28 21:44:50,614 | INFO     | errors: (none)
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | pilot state: finished 
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | transexitcode: 0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | exeerrorcode: 0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | exeerrordiag: 
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | exitcode: 0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | exitmsg: OK
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | cpuconsumptiontime: 72763 s
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | nevents: 400
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | neventsw: 0
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | pid: 18639
[2025-05-28 23:46:23] 2025-05-28 21:44:50,615 | INFO     | pgrp: 18639
[2025-05-28 23:46:23] 2025-05-28 21:44:50,616 | INFO     | corecount: 8
[2025-05-28 23:46:23] 2025-05-28 21:44:50,616 | INFO     | event service: False
[2025-05-28 23:46:23] 2025-05-28 21:44:50,616 | INFO     | sizes: {0: 2405064, 1: 2405263, 8: 2405469, 12: 2405497, 15403: 2435914, 15404: 2435913, 15407: 2445040, 15411: 2445096, 15503: 2445266}
[2025-05-28 23:46:23] 2025-05-28 21:44:50,616 | INFO     | --------------------------------------------------
[2025-05-28 23:46:23] 2025-05-28 21:44:50,616 | INFO     | 
[2025-05-28 23:46:23] 2025-05-28 21:44:50,616 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-05-28 23:46:23] 2025-05-28 21:44:50,895 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,895 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,896 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,897 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 23:46:23] 2025-05-28 21:44:50,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,897 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 23:46:23] 2025-05-28 21:44:50,897 | INFO     | job 6667885113 has completed (purged errors)
[2025-05-28 23:46:23] 2025-05-28 21:44:50,897 | INFO     | overall cleanup function is called
[2025-05-28 23:46:23] 2025-05-28 21:44:51,907 | INFO     | --- collectZombieJob: --- 10, [18639]
[2025-05-28 23:46:23] 2025-05-28 21:44:51,907 | INFO     | zombie collector waiting for pid 18639
[2025-05-28 23:46:23] 2025-05-28 21:44:51,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 23:46:23] 2025-05-28 21:44:51,907 | INFO     | collected zombie processes
[2025-05-28 23:46:23] 2025-05-28 21:44:51,907 | INFO     | will attempt to kill all subprocesses of pid=18639
[2025-05-28 23:46:23] 2025-05-28 21:44:52,011 | INFO     | process IDs to be killed: [18639] (in reverse order)
[2025-05-28 23:46:23] 2025-05-28 21:44:52,072 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 23:46:23] 2025-05-28 21:44:52,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 23:46:23] 2025-05-28 21:44:52,076 | INFO     | did not find any defunct processes belonging to 18639
[2025-05-28 23:46:23] 2025-05-28 21:44:52,080 | INFO     | did not find any defunct processes belonging to 18639
[2025-05-28 23:46:23] 2025-05-28 21:44:52,080 | INFO     | ready for new job
[2025-05-28 23:46:23] 2025-05-28 21:44:52,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 23:46:23] 2025-05-28 21:44:52,083 | INFO     | **************************************
[2025-05-28 23:46:23] 2025-05-28 21:44:52,083 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 23:46:23] 2025-05-28 21:44:52,083 | INFO     | **************************************
[2025-05-28 23:46:23] 2025-05-28 21:44:52,083 | INFO     | 
[2025-05-28 23:46:23] 2025-05-28 21:44:52,084 | INFO     | pilot is running in a VM
[2025-05-28 23:46:23] 2025-05-28 21:44:52,084 | INFO     | architecture information:
[2025-05-28 23:46:23] 2025-05-28 21:44:52,085 | INFO     | executing command: cat /etc/os-release
[2025-05-28 23:46:23] 2025-05-28 21:44:52,247 | INFO     | cat /etc/os-release:
[2025-05-28 23:46:23] NAME="CentOS Linux"
[2025-05-28 23:46:23] VERSION="7 (Core)"
[2025-05-28 23:46:23] ID="centos"
[2025-05-28 23:46:23] ID_LIKE="rhel fedora"
[2025-05-28 23:46:23] VERSION_ID="7"
[2025-05-28 23:46:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 23:46:23] ANSI_COLOR="0;31"
[2025-05-28 23:46:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 23:46:23] HOME_URL="https://www.centos.org/"
[2025-05-28 23:46:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 23:46:23] 
[2025-05-28 23:46:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 23:46:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 23:46:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 23:46:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 23:46:23] 
[2025-05-28 23:46:23] 2025-05-28 21:44:52,247 | INFO     | **************************************
[2025-05-28 23:46:23] 2025-05-28 21:44:52,750 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-05-28 23:46:23] 2025-05-28 21:44:52,961 | INFO     | sufficient remaining disk space (495831744512 B)
[2025-05-28 23:46:23] 2025-05-28 21:44:52,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 23:46:23] 2025-05-28 21:44:52,962 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 23:46:23] 2025-05-28 21:44:52,962 | INFO     | update_server=False
[2025-05-28 23:46:23] 2025-05-28 21:44:52,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 23:46:23] 2025-05-28 21:44:52,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 23:46:23] 2025-05-28 21:44:52,971 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:46:23] 2025-05-28 21:44:52,971 | INFO     | aborting loop
[2025-05-28 23:46:23] 2025-05-28 21:44:53,334 | INFO     | PID=12141 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-28 23:46:23] 2025-05-28 21:44:53,334 | INFO     | .. there are 9 such processes running
[2025-05-28 23:46:23] 2025-05-28 21:44:53,335 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 23:46:23] 2025-05-28 21:44:53,335 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 23:46:23] 2025-05-28 21:44:53,335 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 23:46:23] 2025-05-28 21:44:53,591 | INFO     | all data control threads have been joined
[2025-05-28 23:46:23] 2025-05-28 21:44:53,706 | INFO     | all job control threads have been joined
[2025-05-28 23:46:23] 2025-05-28 21:44:53,968 | INFO     | [job] retrieve thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:53,977 | INFO     | [job] job monitor thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,265 | INFO     | all payload control threads have been joined
[2025-05-28 23:46:23] 2025-05-28 21:44:54,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 23:46:23] 2025-05-28 21:44:54,337 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,390 | INFO     | [payload] failed_post thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,479 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,514 | INFO     | [data] copytool_in thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,566 | INFO     | [job] validate thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,597 | INFO     | [data] control thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,712 | INFO     | [job] control thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,903 | INFO     | [payload] validate_post thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,970 | INFO     | [data] copytool_out thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:54,984 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:55,271 | INFO     | [payload] control thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:55,285 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:55,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:46:23] 2025-05-28 21:44:56,636 | INFO     | [job] queue monitor thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:58,313 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 23:46:23] 2025-05-28 21:44:59,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814356518720)>', '<ExcThread(monitor, started 139813910988544)>']
[2025-05-28 23:46:23] 2025-05-28 21:45:00,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 23:46:23] 2025-05-28 21:45:00,375 | INFO     | [monitor] control thread has ended
[2025-05-28 23:46:23] 2025-05-28 21:45:04,957 | INFO     | all workflow threads have been joined
[2025-05-28 23:46:23] 2025-05-28 21:45:04,957 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 23:46:23] 2025-05-28 21:45:04,957 | INFO     | traces error code: 0
[2025-05-28 23:46:23] 2025-05-28 21:45:04,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 23:46:23] 2025-05-28 21:45:05,291 [wrapper] ==== pilot stdout END ====
[2025-05-28 23:46:23] 2025-05-28 21:45:05,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 23:46:23] 2025-05-28 21:45:05,467 [wrapper] pilotpid: 12141
[2025-05-28 23:46:23] 2025-05-28 21:45:05,525 [wrapper] Pilot exit status: 0
[2025-05-28 23:46:23] 2025-05-28 21:45:05,857 [wrapper] pandaids: 6667885113
[2025-05-28 23:46:23] 2025-05-28 21:45:06,558 [wrapper] cleanup supervisor_pilot  4015 12142
[2025-05-28 23:46:23] 2025-05-28 21:45:06,648 [wrapper] Test setup, not cleaning
[2025-05-28 23:46:23] 2025-05-28 21:45:06,702 [wrapper] apfmon messages muted
[2025-05-28 23:46:23] 2025-05-28 21:45:06,758 [wrapper] ==== wrapper stdout END ====
[2025-05-28 23:46:23] 2025-05-28 21:45:06,791 [wrapper] ==== wrapper stderr END ====
[2025-05-28 23:46:23]  *** Error codes and diagnostics ***
[2025-05-28 23:46:23]     "exeErrorCode": 0,
[2025-05-28 23:46:23]     "exeErrorDiag": "",
[2025-05-28 23:46:23]     "pilotErrorCode": 0,
[2025-05-28 23:46:23]     "pilotErrorDiag": "",
[2025-05-28 23:46:23]  *** Listing of results directory ***
[2025-05-28 23:46:23] total 424468
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc    495897 May 28 03:31 pilot3.tar.gz
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc      5111 May 28 04:20 queuedata.json
[2025-05-28 23:46:23] -rwx------. 1 boinc boinc     37140 May 28 04:23 runpilot2-wrapper.sh
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc       100 May 28 19:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 23:46:23] -rwxr-xr-x. 1 boinc boinc      7986 May 28 19:25 run_atlas
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc       105 May 28 19:25 job.xml
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc      6372 May 28 19:25 init_data.xml
[2025-05-28 23:46:23] -rw-r--r--. 2 boinc boinc 226100890 May 28 19:25 EVNT.44871834._003022.pool.root.1
[2025-05-28 23:46:23] -rw-r--r--. 2 boinc boinc     15093 May 28 19:25 start_atlas.sh
[2025-05-28 23:46:23] drwxrwx--x. 2 boinc boinc        68 May 28 19:25 shared
[2025-05-28 23:46:23] -rw-r--r--. 2 boinc boinc    508881 May 28 19:25 input.tar.gz
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc         0 May 28 19:25 boinc_lockfile
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc      2559 May 28 19:25 pandaJob.out
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc    992313 May 28 19:26 agis_schedconf.cvmfs.json
[2025-05-28 23:46:23] drwx------. 4 boinc boinc      4096 May 28 19:26 pilot3
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc 201261949 May 28 23:41 HITS.44871837._077237.pool.root.1
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc       531 May 28 23:42 boinc_task_state.xml
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc      1020 May 28 23:43 memory_monitor_summary.json
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc   1603667 May 28 23:43 agis_ddmendpoints.agis.ALL.json
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc    389264 May 28 23:43 log.44871837._077237.job.log.tgz.1
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc        95 May 28 23:44 pilot_heartbeat.json
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc      7690 May 28 23:44 heartbeat.json
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc      4809 May 28 23:45 pilotlog.txt
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc   1338857 May 28 23:45 log.44871837._077237.job.log.1
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc       357 May 28 23:45 output.list
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc       620 May 28 23:45 runtime_log
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc   1751040 May 28 23:45 result.tar.gz
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc      8673 May 28 23:45 runtime_log.err
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc       656 May 28 23:45 OhKMDmucLe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD1aKDmlwWZIo.diag
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc      8192 May 28 23:46 boinc_mmap_file
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc        28 May 28 23:46 wrapper_checkpoint.txt
[2025-05-28 23:46:23] -rw-r--r--. 1 boinc boinc     20555 May 28 23:46 stderr.txt
[2025-05-28 23:46:23] HITS file was successfully produced:
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc 201261949 May 28 23:41 shared/HITS.pool.root.1
[2025-05-28 23:46:23]  *** Contents of shared directory: ***
[2025-05-28 23:46:23] total 419580
[2025-05-28 23:46:23] -rw-r--r--. 2 boinc boinc 226100890 May 28 19:25 ATLAS.root_0
[2025-05-28 23:46:23] -rw-r--r--. 2 boinc boinc     15093 May 28 19:25 start_atlas.sh
[2025-05-28 23:46:23] -rw-r--r--. 2 boinc boinc    508881 May 28 19:25 input.tar.gz
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc 201261949 May 28 23:41 HITS.pool.root.1
[2025-05-28 23:46:23] -rw-------. 1 boinc boinc   1751040 May 28 23:45 result.tar.gz
23:46:25 (8519): run_atlas exited; CPU time 72931.699596
23:46:25 (8519): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN