Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-28 12:26:38 (10076): Detected: vboxwrapper 26206
2025-05-28 12:26:38 (10076): Detected: BOINC client v8.2.1
2025-05-28 12:26:38 (10076): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-05-28 12:26:39 (10076): Successfully copied 'init_data.xml' to the shared directory.
2025-05-28 12:26:39 (10076): Create VM. (boinc_106715a93b2146a2, slot#3)
2025-05-28 12:26:40 (10076): Setting Memory Size for VM. (4096MB)
2025-05-28 12:26:40 (10076): Setting CPU Count for VM. (1)
2025-05-28 12:26:40 (10076): Setting Chipset Options for VM.
2025-05-28 12:26:41 (10076): Setting Graphics Controller Options for VM.
2025-05-28 12:26:41 (10076): Setting Boot Options for VM.
2025-05-28 12:26:41 (10076): Setting Network Configuration for NAT.
2025-05-28 12:26:41 (10076): Enabling VM Network Access.
2025-05-28 12:26:42 (10076): Disabling USB Support for VM.
2025-05-28 12:26:42 (10076): Disabling COM Port Support for VM.
2025-05-28 12:26:42 (10076): Disabling LPT Port Support for VM.
2025-05-28 12:26:42 (10076): Disabling Audio Support for VM.
2025-05-28 12:26:43 (10076): Disabling Clipboard Support for VM.
2025-05-28 12:26:43 (10076): Disabling Drag and Drop Support for VM.
2025-05-28 12:26:43 (10076): Adding storage controller(s) to VM.
2025-05-28 12:26:43 (10076): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-28 12:26:44 (10076): Adding VirtualBox Guest Additions to VM.
2025-05-28 12:26:44 (10076): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-28 12:26:44 (10076): forwarding host port 57036 to guest port 80
2025-05-28 12:26:45 (10076): Enabling remote desktop for VM.
2025-05-28 12:26:45 (10076): Required extension pack not installed, remote desktop not enabled.
2025-05-28 12:26:45 (10076): Enabling shared directory for VM.
2025-05-28 12:26:45 (10076): Starting VM using VBoxManage interface. (boinc_106715a93b2146a2, slot#3)
2025-05-28 12:26:52 (10076): Successfully started VM. (PID = '24836')
2025-05-28 12:26:52 (10076): Reporting VM Process ID to BOINC.
2025-05-28 12:26:52 (10076): Guest Log: BIOS: VirtualBox 7.1.8
2025-05-28 12:26:52 (10076): Guest Log: CPUID EDX: 0x178bfbff
2025-05-28 12:26:52 (10076): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-28 12:26:52 (10076): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-28 12:26:52 (10076): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-28 12:26:52 (10076): Detected: Web Application Enabled (http://localhost:57036)
2025-05-28 12:26:52 (10076): Preference change detected
2025-05-28 12:26:52 (10076): Setting CPU throttle for VM. (100%)
2025-05-28 12:26:53 (10076): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-28 12:26:54 (10076): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-28 12:26:54 (10076): Guest Log: BIOS: Booting from Hard Disk...
2025-05-28 12:26:57 (10076): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-28 12:26:57 (10076): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-28 12:26:57 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-28 12:27:04 (10076): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-28 12:27:04 (10076): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-28 12:27:21 (10076): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-28 12:27:21 (10076): Guest Log: 00:00:00.000221 main     Log opened 2025-05-28T12:27:19.046681000Z
2025-05-28 12:27:21 (10076): Guest Log: 00:00:00.000396 main     OS Product: Linux
2025-05-28 12:27:21 (10076): Guest Log: 00:00:00.000431 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-28 12:27:21 (10076): Guest Log: 00:00:00.000458 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-28 12:27:21 (10076): Guest Log: 00:00:00.000486 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-28 12:27:21 (10076): Guest Log: 00:00:00.000487 main     Process ID: 1254
2025-05-28 12:27:21 (10076): Guest Log: 00:00:00.000487 main     Package type: LINUX_64BITS_GENERIC
2025-05-28 12:27:21 (10076): Guest Log: 00:00:00.009264 main     5.2.32 r132073 started. Verbose level = 0
2025-05-28 12:27:21 (10076): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-28 12:27:21 (10076): Guest Log: [INFO] Mounting shared directory
2025-05-28 12:27:21 (10076): Guest Log: [INFO] Checking for init_data.xml
2025-05-28 12:27:25 (10076): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-28 12:27:25 (10076): Guest Log: [INFO] Detected branch: prod
2025-05-28 12:27:25 (10076): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-28 12:27:25 (10076): Guest Log: Copying input files
2025-05-28 12:27:27 (10076): Guest Log: Copied input files into RunAtlas.
2025-05-28 12:27:27 (10076): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-05-28 12:27:31 (10076): Guest Log: 00:00:10.040073 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 969 832 000ns (GuestNow=1 748 428 051 115 323 000 ns GuestLast=1 748 435 239 085 155 000 ns fSetTimeLastLoop=true )
2025-05-28 12:27:36 (10076): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-28 12:27:36 (10076): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-28 12:27:36 (10076): Guest Log: 2.6.3.0 1523 0 29512 146515 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-05-28 12:27:37 (10076): Guest Log: copied the webapp to /var/www
2025-05-28 12:27:37 (10076): Guest Log: core_number=1
2025-05-28 12:27:37 (10076): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-28 12:27:37 (10076): Guest Log:  *** Starting ATLAS job. (PandaID=6665713426 taskID=44871837) ***
2025-05-28 14:06:58 (10076): Status Report: Elapsed Time: '6000.000000'
2025-05-28 14:06:58 (10076): Status Report: CPU Time: '5774.406250'
2025-05-28 15:47:03 (10076): Status Report: Elapsed Time: '12000.000000'
2025-05-28 15:47:03 (10076): Status Report: CPU Time: '11755.953125'
2025-05-28 17:27:09 (10076): Status Report: Elapsed Time: '18000.000000'
2025-05-28 17:27:09 (10076): Status Report: CPU Time: '17738.843750'
2025-05-28 19:07:14 (10076): Status Report: Elapsed Time: '24000.000000'
2025-05-28 19:07:14 (10076): Status Report: CPU Time: '23720.750000'
2025-05-28 20:47:19 (10076): Status Report: Elapsed Time: '30000.000000'
2025-05-28 20:47:19 (10076): Status Report: CPU Time: '29700.687500'
2025-05-28 22:27:25 (10076): Status Report: Elapsed Time: '36000.000000'
2025-05-28 22:27:25 (10076): Status Report: CPU Time: '35677.968750'
2025-05-29 00:07:30 (10076): Status Report: Elapsed Time: '42000.000000'
2025-05-29 00:07:30 (10076): Status Report: CPU Time: '41660.531250'
2025-05-29 01:47:36 (10076): Status Report: Elapsed Time: '48000.000000'
2025-05-29 01:47:36 (10076): Status Report: CPU Time: '47640.421875'
2025-05-29 03:27:41 (10076): Status Report: Elapsed Time: '54000.000000'
2025-05-29 03:27:41 (10076): Status Report: CPU Time: '53621.140625'
2025-05-29 05:07:47 (10076): Status Report: Elapsed Time: '60000.000000'
2025-05-29 05:07:47 (10076): Status Report: CPU Time: '59600.000000'
2025-05-29 06:38:42 (10076): Guest Log:  *** Job finished ***
2025-05-29 06:38:42 (10076): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:34,262 | INFO     | [payload] validate_pre thread has finished
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:34,262 | INFO     | [data] copytool_in thread has finished
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:36,039 | INFO     | [data] queue_monitor thread has finished
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:36,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491796297536)>', '<ExcThread(monitor, started 140491484010240)>']
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:36,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:36,590 | INFO     | [monitor] control thread has ended
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,293 | INFO     | all workflow threads have been joined
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,293 | INFO     | end of generic workflow (traces error code: 0)
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,294 | INFO     | traces error code: 0
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,427 [wrapper] ==== pilot stdout END ====
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,434 [wrapper] ==== wrapper stdout RESUME ====
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,440 [wrapper] pilotpid: 5765
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,446 [wrapper] Pilot exit status: 0
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,475 [wrapper] pandaids: 6665713426
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,511 [wrapper] cleanup supervisor_pilot 28197 5766
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,521 [wrapper] Test setup, not cleaning
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,526 [wrapper] apfmon messages muted
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,532 [wrapper] ==== wrapper stdout END ====
2025-05-29 06:38:42 (10076): Guest Log: 2025-05-29 04:38:41,539 [wrapper] ==== wrapper stderr END ====
2025-05-29 06:38:42 (10076): Guest Log:  *** Error codes and diagnostics ***
2025-05-29 06:38:42 (10076): Guest Log:     "exeErrorCode": 0,
2025-05-29 06:38:42 (10076): Guest Log:     "exeErrorDiag": "",
2025-05-29 06:38:42 (10076): Guest Log:     "pilotErrorCode": 0,
2025-05-29 06:38:42 (10076): Guest Log:     "pilotErrorDiag": "",
2025-05-29 06:38:42 (10076): Guest Log:  *** Listing of results directory ***
2025-05-29 06:38:42 (10076): Guest Log: total 207416
2025-05-29 06:38:42 (10076): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 25 01:48 pilot3.tar.gz
2025-05-29 06:38:42 (10076): Guest Log: -rwx------. 1 atlas atlas     37140 May 25 01:54 runpilot2-wrapper.sh
2025-05-29 06:38:42 (10076): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 25 01:54 queuedata.json
2025-05-29 06:38:42 (10076): Guest Log: -rwxr-xr-x. 1 atlas atlas      9394 May 28 10:27 init_data.xml
2025-05-29 06:38:42 (10076): Guest Log: -rwxr-xr-x. 1 atlas atlas    508875 May 28 10:27 input.tar.gz
2025-05-29 06:38:42 (10076): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 28 10:27 start_atlas.sh
2025-05-29 06:38:42 (10076): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 28 10:27 EVNT.44871834._001092.pool.root.1 -> /data/./ATLAS.root_0
2025-05-29 06:38:42 (10076): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 28 10:27 pandaJob.out
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas    990995 May 28 10:28 agis_schedconf.cvmfs.json
2025-05-29 06:38:42 (10076): Guest Log: drwx------. 4 atlas atlas      4096 May 28 10:28 pilot3
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas 195965553 May 29 04:37 HITS.44871837._027405.pool.root.1
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas        95 May 29 04:38 pilot_heartbeat.json
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas      1022 May 29 04:38 memory_monitor_summary.json
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas   1603667 May 29 04:38 agis_ddmendpoints.agis.ALL.json
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas    731441 May 29 04:38 log.44871837._027405.job.log.tgz.1
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas      7680 May 29 04:38 heartbeat.json
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas      4413 May 29 04:38 pilotlog.txt
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas   5594117 May 29 04:38 log.44871837._027405.job.log.1
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas       357 May 29 04:38 output.list
2025-05-29 06:38:42 (10076): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 29 04:38 runtime_log
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas   6348800 May 29 04:38 result.tar.gz
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas       656 May 29 04:38 WNDMDmokFd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO9SKDmX364Xo.diag
2025-05-29 06:38:42 (10076): Guest Log: -rw-r--r--. 1 atlas atlas      8459 May 29 04:38 runtime_log.err
2025-05-29 06:38:42 (10076): Guest Log: Looking for outputfile HITS.44871837._027405.pool.root.1
2025-05-29 06:38:42 (10076): Guest Log: HITS file was successfully produced
2025-05-29 06:38:42 (10076): Guest Log: -rw-------. 1 atlas atlas 195965553 May 29 04:37 /home/atlas/RunAtlas/HITS.44871837._027405.pool.root.1
2025-05-29 06:38:43 (10076): Guest Log: Successfully finished the ATLAS job!
2025-05-29 06:38:43 (10076): Guest Log: Copying the results back to the shared directory!
2025-05-29 06:38:43 (10076): Guest Log:  *** Contents of shared directory: ***
2025-05-29 06:38:43 (10076): Guest Log: total 418976
2025-05-29 06:38:43 (10076): Guest Log: -rwxrwxrwx. 1 root root 226170388 May 28 10:26 ATLAS.root_0
2025-05-29 06:38:43 (10076): Guest Log: -rwxrwxrwx. 1 root root 195965553 May 29 04:38 HITS.pool.root.1
2025-05-29 06:38:44 (10076): Guest Log: -rwxrwxrwx. 1 root root      9394 May 28 10:26 init_data.xml
2025-05-29 06:38:44 (10076): Guest Log: -rwxrwxrwx. 1 root root    508875 May 28 06:58 input.tar.gz
2025-05-29 06:38:44 (10076): Guest Log: -rwxrwxrwx. 1 root root   6348800 May 29 04:38 result.tar.gz
2025-05-29 06:38:44 (10076): Guest Log: -rwxrwxrwx. 1 root root     15093 May 28 06:58 start_atlas.sh
2025-05-29 06:38:44 (10076): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-29 06:38:44 (10076): VM Completion File Detected.
2025-05-29 06:38:44 (10076): Powering off VM.
2025-05-29 06:38:45 (10076): Successfully stopped VM.
2025-05-29 06:38:45 (10076): Deregistering VM. (boinc_106715a93b2146a2, slot#3)
2025-05-29 06:38:45 (10076): Removing network bandwidth throttle group from VM.
2025-05-29 06:38:45 (10076): Removing VM from VirtualBox.
06:38:50 (10076): called boinc_finish(0)

</stderr_txt>
]]>

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