Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:50:25 (4839): wrapper (7.7.26015): starting
18:50:25 (4839): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 18:50:25] Arguments: --nthreads 8
[2025-05-28 18:50:25] Threads: 8
[2025-05-28 18:50:25] Checking for CVMFS
[2025-05-28 18:50:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 18:50:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 18:50:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 18:50:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 18:50:25] 2.11.2.0 7869 23403 89456 146525 0 68 24452523 25165824 2981 130560 0 12430478 99.787 14275732 1708 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 18:50:25] CVMFS is ok
[2025-05-28 18:50:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 18:50:25] Checking for apptainer binary...
[2025-05-28 18:50:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 18:50:25] Running /usr/bin/apptainer --version
[2025-05-28 18:50:25] apptainer version 1.3.2-1.el7
[2025-05-28 18:50:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 18:50:27] cg-vwn276.simple-grid.lan
[2025-05-28 18:50:27] apptainer works
[2025-05-28 18:50:27] Set ATHENA_PROC_NUMBER=8
[2025-05-28 18:50:27] Set ATHENA_CORE_NUMBER=8
[2025-05-28 18:50:27] Starting ATLAS job with PandaID=6667307236
[2025-05-28 18:50:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 23:32:32]  *** The last 200 lines of the pilot log: ***
[2025-05-28 23:32:32] 2025-05-28 21:31:41,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:32:32] 2025-05-28 21:31:41,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:32:32] 2025-05-28 21:31:41,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:32:32] 2025-05-28 21:31:41,420 | INFO     | fitting pss+swap vs Time
[2025-05-28 23:32:32] 2025-05-28 21:31:41,420 | INFO     | sum of square deviations: 6519285025.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,423 | INFO     | sum of deviations: 5569157656.5
[2025-05-28 23:32:32] 2025-05-28 21:31:41,423 | INFO     | mean x: 1748459479.5
[2025-05-28 23:32:32] 2025-05-28 21:31:41,423 | INFO     | mean y: 2481956.40942029
[2025-05-28 23:32:32] 2025-05-28 21:31:41,423 | INFO     | -- intersect: -1491155223.1273696
[2025-05-28 23:32:32] 2025-05-28 21:31:41,424 | INFO     | intersect: -1491155223.1273696
[2025-05-28 23:32:32] 2025-05-28 21:31:41,424 | INFO     | chi2: 2.4894653634503925
[2025-05-28 23:32:32] 2025-05-28 21:31:41,425 | INFO     | sum of square deviations: 6171352920.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,427 | INFO     | sum of deviations: 24313922595.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,427 | INFO     | mean x: 1748459327.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,428 | INFO     | mean y: 2490049.8302583024
[2025-05-28 23:32:32] 2025-05-28 21:31:41,428 | INFO     | -- intersect: -6886097475.18586
[2025-05-28 23:32:32] 2025-05-28 21:31:41,428 | INFO     | intersect: -6886097475.18586
[2025-05-28 23:32:32] 2025-05-28 21:31:41,428 | INFO     | chi2: 1.6511331429923257
[2025-05-28 23:32:32] 2025-05-28 21:31:41,428 | INFO     | current chi2=1.6511331429923257 (change=33.67519117824321 %)
[2025-05-28 23:32:32] 2025-05-28 21:31:41,429 | INFO     | sum of square deviations: 5836025702.5
[2025-05-28 23:32:32] 2025-05-28 21:31:41,431 | INFO     | sum of deviations: 23716613553.499996
[2025-05-28 23:32:32] 2025-05-28 21:31:41,431 | INFO     | mean x: 1748459174.5
[2025-05-28 23:32:32] 2025-05-28 21:31:41,432 | INFO     | mean y: 2489778.0714285714
[2025-05-28 23:32:32] 2025-05-28 21:31:41,432 | INFO     | -- intersect: -7102950237.027291
[2025-05-28 23:32:32] 2025-05-28 21:31:41,432 | INFO     | intersect: -7102950237.027291
[2025-05-28 23:32:32] 2025-05-28 21:31:41,432 | INFO     | chi2: 1.6517360686277975
[2025-05-28 23:32:32] 2025-05-28 21:31:41,432 | INFO     | current chi2=1.6517360686277975 (change=-0.0365158702089369 %)
[2025-05-28 23:32:32] 2025-05-28 21:31:41,432 | INFO     | right removable region: 265
[2025-05-28 23:32:32] 2025-05-28 21:31:41,433 | INFO     | sum of square deviations: 6171352920.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,435 | INFO     | sum of deviations: -37841769375.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,436 | INFO     | mean x: 1748459632.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,436 | INFO     | mean y: 2500832.6752767526
[2025-05-28 23:32:32] 2025-05-28 21:31:41,436 | INFO     | -- intersect: 10723781403.296307
[2025-05-28 23:32:32] 2025-05-28 21:31:41,436 | INFO     | intersect: 10723781403.296307
[2025-05-28 23:32:32] 2025-05-28 21:31:41,437 | INFO     | chi2: 0.9896624126417924
[2025-05-28 23:32:32] 2025-05-28 21:31:41,437 | INFO     | current chi2=0.9896624126417924 (change=60.245985858179495 %)
[2025-05-28 23:32:32] 2025-05-28 21:31:41,437 | INFO     | sum of square deviations: 5836025702.5
[2025-05-28 23:32:32] 2025-05-28 21:31:41,440 | INFO     | sum of deviations: -36597866952.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,440 | INFO     | mean x: 1748459784.5
[2025-05-28 23:32:32] 2025-05-28 21:31:41,440 | INFO     | mean y: 2500242.736842105
[2025-05-28 23:32:32] 2025-05-28 21:31:41,440 | INFO     | -- intersect: 10967136422.567577
[2025-05-28 23:32:32] 2025-05-28 21:31:41,440 | INFO     | intersect: 10967136422.567577
[2025-05-28 23:32:32] 2025-05-28 21:31:41,441 | INFO     | chi2: 0.9745604005839698
[2025-05-28 23:32:32] 2025-05-28 21:31:41,441 | INFO     | current chi2=0.9745604005839698 (change=1.525976117200366 %)
[2025-05-28 23:32:32] 2025-05-28 21:31:41,441 | INFO     | left removable region: 20
[2025-05-28 23:32:32] 2025-05-28 21:31:41,441 | INFO     | sum of square deviations: 4560048290.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,443 | INFO     | sum of deviations: 717421549.0000005
[2025-05-28 23:32:32] 2025-05-28 21:31:41,444 | INFO     | mean x: 1748459754.0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,444 | INFO     | mean y: 2499493.187755102
[2025-05-28 23:32:32] 2025-05-28 21:31:41,444 | INFO     | -- intersect: -272581520.28081936
[2025-05-28 23:32:32] 2025-05-28 21:31:41,444 | INFO     | intersect: -272581520.28081936
[2025-05-28 23:32:32] 2025-05-28 21:31:41,444 | INFO     | chi2: 0.03640212841548666
[2025-05-28 23:32:32] 2025-05-28 21:31:41,445 | INFO     | -- intersect: -272581520.28081936
[2025-05-28 23:32:32] 2025-05-28 21:31:41,445 | INFO     | current memory leak: 0.16 B/s (using 245 data points, chi2=0.04)
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | ..............................
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | . Timing measurements:
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | . get job = 0 s
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | . initial setup = 2 s
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | . payload setup = 14 s
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | . stage-in = 0 s
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | . payload execution = 16802 s
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | . stage-out = 1 s
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | . log creation = 0 s
[2025-05-28 23:32:32] 2025-05-28 21:31:41,446 | INFO     | ..............................
[2025-05-28 23:32:32] 2025-05-28 21:31:41,737 | INFO     | 
[2025-05-28 23:32:32] 2025-05-28 21:31:41,737 | INFO     | job summary report
[2025-05-28 23:32:32] 2025-05-28 21:31:41,737 | INFO     | --------------------------------------------------
[2025-05-28 23:32:32] 2025-05-28 21:31:41,737 | INFO     | PanDA job id: 6667307236
[2025-05-28 23:32:32] 2025-05-28 21:31:41,737 | INFO     | task id: 44871837
[2025-05-28 23:32:32] 2025-05-28 21:31:41,737 | INFO     | errors: (none)
[2025-05-28 23:32:32] 2025-05-28 21:31:41,737 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 23:32:32] 2025-05-28 21:31:41,737 | INFO     | pilot state: finished 
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | transexitcode: 0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | exeerrorcode: 0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | exeerrordiag: 
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | exitcode: 0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | exitmsg: OK
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | cpuconsumptiontime: 68718 s
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | nevents: 400
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | neventsw: 0
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | pid: 15163
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | pgrp: 15163
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | corecount: 8
[2025-05-28 23:32:32] 2025-05-28 21:31:41,738 | INFO     | event service: False
[2025-05-28 23:32:32] 2025-05-28 21:31:41,739 | INFO     | sizes: {0: 2405063, 1: 2405262, 9: 2405468, 12: 2405496, 16820: 2436555, 16822: 2445680, 16836: 2445794}
[2025-05-28 23:32:32] 2025-05-28 21:31:41,739 | INFO     | --------------------------------------------------
[2025-05-28 23:32:32] 2025-05-28 21:31:41,739 | INFO     | 
[2025-05-28 23:32:32] 2025-05-28 21:31:41,739 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-28 23:32:32] 2025-05-28 21:31:41,771 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,771 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,772 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,773 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 23:32:32] 2025-05-28 21:31:41,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,773 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 23:32:32] 2025-05-28 21:31:41,773 | INFO     | job 6667307236 has completed (purged errors)
[2025-05-28 23:32:32] 2025-05-28 21:31:41,773 | INFO     | overall cleanup function is called
[2025-05-28 23:32:32] 2025-05-28 21:31:42,782 | INFO     | --- collectZombieJob: --- 10, [15163]
[2025-05-28 23:32:32] 2025-05-28 21:31:42,782 | INFO     | zombie collector waiting for pid 15163
[2025-05-28 23:32:32] 2025-05-28 21:31:42,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 23:32:32] 2025-05-28 21:31:42,783 | INFO     | collected zombie processes
[2025-05-28 23:32:32] 2025-05-28 21:31:42,783 | INFO     | will attempt to kill all subprocesses of pid=15163
[2025-05-28 23:32:32] 2025-05-28 21:31:42,887 | INFO     | process IDs to be killed: [15163] (in reverse order)
[2025-05-28 23:32:32] 2025-05-28 21:31:42,953 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 23:32:32] 2025-05-28 21:31:42,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 23:32:32] 2025-05-28 21:31:42,957 | INFO     | did not find any defunct processes belonging to 15163
[2025-05-28 23:32:32] 2025-05-28 21:31:42,960 | INFO     | did not find any defunct processes belonging to 15163
[2025-05-28 23:32:32] 2025-05-28 21:31:42,960 | INFO     | ready for new job
[2025-05-28 23:32:32] 2025-05-28 21:31:42,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 23:32:32] 2025-05-28 21:31:42,962 | INFO     | **************************************
[2025-05-28 23:32:32] 2025-05-28 21:31:42,963 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 23:32:32] 2025-05-28 21:31:42,963 | INFO     | **************************************
[2025-05-28 23:32:32] 2025-05-28 21:31:42,963 | INFO     | 
[2025-05-28 23:32:32] 2025-05-28 21:31:42,963 | INFO     | pilot is running in a VM
[2025-05-28 23:32:32] 2025-05-28 21:31:42,963 | INFO     | architecture information:
[2025-05-28 23:32:32] 2025-05-28 21:31:42,964 | INFO     | executing command: cat /etc/os-release
[2025-05-28 23:32:32] 2025-05-28 21:31:42,992 | INFO     | cat /etc/os-release:
[2025-05-28 23:32:32] NAME="CentOS Linux"
[2025-05-28 23:32:32] VERSION="7 (Core)"
[2025-05-28 23:32:32] ID="centos"
[2025-05-28 23:32:32] ID_LIKE="rhel fedora"
[2025-05-28 23:32:32] VERSION_ID="7"
[2025-05-28 23:32:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 23:32:32] ANSI_COLOR="0;31"
[2025-05-28 23:32:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 23:32:32] HOME_URL="https://www.centos.org/"
[2025-05-28 23:32:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 23:32:32] 
[2025-05-28 23:32:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 23:32:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 23:32:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 23:32:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 23:32:32] 
[2025-05-28 23:32:32] 2025-05-28 21:31:42,992 | INFO     | **************************************
[2025-05-28 23:32:32] 2025-05-28 21:31:43,495 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-28 23:32:32] 2025-05-28 21:31:43,587 | INFO     | sufficient remaining disk space (496642293760 B)
[2025-05-28 23:32:32] 2025-05-28 21:31:43,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 23:32:32] 2025-05-28 21:31:43,588 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 23:32:32] 2025-05-28 21:31:43,588 | INFO     | update_server=False
[2025-05-28 23:32:32] 2025-05-28 21:31:43,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 23:32:32] 2025-05-28 21:31:43,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 23:32:32] 2025-05-28 21:31:43,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 23:32:32] 2025-05-28 21:31:44,008 | INFO     | all payload control threads have been joined
[2025-05-28 23:32:32] 2025-05-28 21:31:44,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:32:32] 2025-05-28 21:31:44,224 | INFO     | aborting loop
[2025-05-28 23:32:32] 2025-05-28 21:31:44,461 | INFO     | all data control threads have been joined
[2025-05-28 23:32:32] 2025-05-28 21:31:44,593 | INFO     | [job] retrieve thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:44,624 | INFO     | PID=8507 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-28 23:32:32] 2025-05-28 21:31:44,625 | INFO     | .. there are 9 such processes running
[2025-05-28 23:32:32] 2025-05-28 21:31:44,625 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 23:32:32] 2025-05-28 21:31:44,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 23:32:32] 2025-05-28 21:31:44,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 23:32:32] 2025-05-28 21:31:44,725 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:44,806 | INFO     | [job] validate thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:45,015 | INFO     | [payload] control thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:45,077 | INFO     | all job control threads have been joined
[2025-05-28 23:32:32] 2025-05-28 21:31:45,229 | INFO     | [job] job monitor thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:45,466 | INFO     | [data] control thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:45,489 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:45,606 | INFO     | [data] copytool_out thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:45,726 | INFO     | [payload] failed_post thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:45,758 | INFO     | [payload] validate_post thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:45,818 | INFO     | [data] copytool_in thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:45,889 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:46,082 | INFO     | [job] control thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:46,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:32:32] 2025-05-28 21:31:47,599 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:47,611 | INFO     | [job] queue monitor thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:53,838 | INFO     | job.realtimelogging is not enabled
[2025-05-28 23:32:32] 2025-05-28 21:31:54,843 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 23:32:32] 2025-05-28 21:31:56,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573373785920)>', '<ExcThread(monitor, started 140572794808064)>']
[2025-05-28 23:32:32] 2025-05-28 21:31:57,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 23:32:32] 2025-05-28 21:31:57,696 | INFO     | [monitor] control thread has ended
[2025-05-28 23:32:32] 2025-05-28 21:32:01,803 | INFO     | all workflow threads have been joined
[2025-05-28 23:32:32] 2025-05-28 21:32:01,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 23:32:32] 2025-05-28 21:32:01,803 | INFO     | traces error code: 0
[2025-05-28 23:32:32] 2025-05-28 21:32:01,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 23:32:32] 2025-05-28 21:32:02,009 [wrapper] ==== pilot stdout END ====
[2025-05-28 23:32:32] 2025-05-28 21:32:02,013 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 23:32:32] 2025-05-28 21:32:02,017 [wrapper] pilotpid: 8507
[2025-05-28 23:32:32] 2025-05-28 21:32:02,022 [wrapper] Pilot exit status: 0
[2025-05-28 23:32:32] 2025-05-28 21:32:02,267 [wrapper] pandaids: 6667307236
[2025-05-28 23:32:32] 2025-05-28 21:32:02,497 [wrapper] cleanup supervisor_pilot  6639 8508
[2025-05-28 23:32:32] 2025-05-28 21:32:02,515 [wrapper] Test setup, not cleaning
[2025-05-28 23:32:32] 2025-05-28 21:32:02,544 [wrapper] apfmon messages muted
[2025-05-28 23:32:32] 2025-05-28 21:32:02,620 [wrapper] ==== wrapper stdout END ====
[2025-05-28 23:32:32] 2025-05-28 21:32:02,644 [wrapper] ==== wrapper stderr END ====
[2025-05-28 23:32:32]  *** Error codes and diagnostics ***
[2025-05-28 23:32:32]     "exeErrorCode": 0,
[2025-05-28 23:32:32]     "exeErrorDiag": "",
[2025-05-28 23:32:32]     "pilotErrorCode": 0,
[2025-05-28 23:32:32]     "pilotErrorDiag": "",
[2025-05-28 23:32:32]  *** Listing of results directory ***
[2025-05-28 23:32:32] total 414960
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc      5111 May 27 18:36 queuedata.json
[2025-05-28 23:32:32] -rwx------. 1 boinc boinc     37140 May 27 18:39 runpilot2-wrapper.sh
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc    495897 May 27 18:39 pilot3.tar.gz
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc       100 May 28 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 23:32:32] -rwxr-xr-x. 1 boinc boinc      7986 May 28 18:50 run_atlas
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc       105 May 28 18:50 job.xml
[2025-05-28 23:32:32] -rw-r--r--. 2 boinc boinc 225235432 May 28 18:50 EVNT.44871834._002762.pool.root.1
[2025-05-28 23:32:32] -rw-r--r--. 2 boinc boinc     15093 May 28 18:50 start_atlas.sh
[2025-05-28 23:32:32] drwxrwx--x. 2 boinc boinc        68 May 28 18:50 shared
[2025-05-28 23:32:32] -rw-r--r--. 2 boinc boinc    508871 May 28 18:50 input.tar.gz
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc      6370 May 28 18:50 init_data.xml
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc         0 May 28 18:50 boinc_lockfile
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc      2559 May 28 18:50 pandaJob.out
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc    991935 May 28 18:50 agis_schedconf.cvmfs.json
[2025-05-28 23:32:32] drwx------. 4 boinc boinc      4096 May 28 18:50 pilot3
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc 192121293 May 28 23:30 HITS.44871837._070278.pool.root.1
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc       531 May 28 23:30 boinc_task_state.xml
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc        95 May 28 23:30 pilot_heartbeat.json
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc      1019 May 28 23:31 memory_monitor_summary.json
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc   1603667 May 28 23:31 agis_ddmendpoints.agis.ALL.json
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc    409663 May 28 23:31 log.44871837._070278.job.log.tgz.1
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc      7685 May 28 23:31 heartbeat.json
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc      4879 May 28 23:32 pilotlog.txt
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc   1456717 May 28 23:32 log.44871837._070278.job.log.1
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc       357 May 28 23:32 output.list
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc       620 May 28 23:32 runtime_log
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc   1884160 May 28 23:32 result.tar.gz
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc       658 May 28 23:32 VPvNDm6VCe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmntZKDm7Rlhkm.diag
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc      8659 May 28 23:32 runtime_log.err
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc      8192 May 28 23:32 boinc_mmap_file
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc        28 May 28 23:32 wrapper_checkpoint.txt
[2025-05-28 23:32:32] -rw-r--r--. 1 boinc boinc     20507 May 28 23:32 stderr.txt
[2025-05-28 23:32:32] HITS file was successfully produced:
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc 192121293 May 28 23:30 shared/HITS.pool.root.1
[2025-05-28 23:32:32]  *** Contents of shared directory: ***
[2025-05-28 23:32:32] total 409936
[2025-05-28 23:32:32] -rw-r--r--. 2 boinc boinc 225235432 May 28 18:50 ATLAS.root_0
[2025-05-28 23:32:32] -rw-r--r--. 2 boinc boinc     15093 May 28 18:50 start_atlas.sh
[2025-05-28 23:32:32] -rw-r--r--. 2 boinc boinc    508871 May 28 18:50 input.tar.gz
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc 192121293 May 28 23:30 HITS.pool.root.1
[2025-05-28 23:32:32] -rw-------. 1 boinc boinc   1884160 May 28 23:32 result.tar.gz
23:32:34 (4839): run_atlas exited; CPU time 68908.754651
23:32:34 (4839): called boinc_finish(0)

</stderr_txt>
]]>

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