Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:44:09 (1564916): wrapper (7.7.26015): starting
03:44:09 (1564916): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 03:44:09] Arguments: --nthreads 4
[2025-06-04 03:44:09] Threads: 4
[2025-06-04 03:44:09] Checking for CVMFS
[2025-06-04 03:44:09] No cvmfs_config command found, will try listing directly
[2025-06-04 03:44:09] CVMFS is ok
[2025-06-04 03:44:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:44:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:44:09] Further information can be found at the LHC@home message board.
[2025-06-04 03:44:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:44:09] Checking for apptainer binary...
[2025-06-04 03:44:09] which: no apptainer in ((null))
[2025-06-04 03:44:09] apptainer is not installed, using version from CVMFS
[2025-06-04 03:44:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:44:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-06-04 03:44:09] apptainer works
[2025-06-04 03:44:09] Set ATHENA_PROC_NUMBER=4
[2025-06-04 03:44:09] Set ATHENA_CORE_NUMBER=4
[2025-06-04 03:44:09] Starting ATLAS job with PandaID=6667580010
[2025-06-04 03:44:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:40:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:40:42] 2025-06-04 06:33:54,005 | INFO     | mean x: 1749010150.0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,005 | INFO     | mean y: 2318925.8421052634
[2025-06-04 08:40:42] 2025-06-04 06:33:54,005 | INFO     | -- intersect: -6819541587.43936
[2025-06-04 08:40:42] 2025-06-04 06:33:54,005 | INFO     | intersect: -6819541587.43936
[2025-06-04 08:40:42] 2025-06-04 06:33:54,006 | INFO     | chi2: 2.1223884589987674
[2025-06-04 08:40:42] 2025-06-04 06:33:54,007 | INFO     | sum of square deviations: 6806862510.0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,009 | INFO     | sum of deviations: 43553661419.5
[2025-06-04 08:40:42] 2025-06-04 06:33:54,009 | INFO     | mean x: 1749009997.5
[2025-06-04 08:40:42] 2025-06-04 06:33:54,009 | INFO     | mean y: 2325220.6464285715
[2025-06-04 08:40:42] 2025-06-04 06:33:54,009 | INFO     | -- intersect: -11188702824.73061
[2025-06-04 08:40:42] 2025-06-04 06:33:54,009 | INFO     | intersect: -11188702824.73061
[2025-06-04 08:40:42] 2025-06-04 06:33:54,010 | INFO     | chi2: 1.4572847924304588
[2025-06-04 08:40:42] 2025-06-04 06:33:54,010 | INFO     | current chi2=1.4572847924304588 (change=31.337508633177823 %)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,011 | INFO     | sum of square deviations: 6448679050.0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,013 | INFO     | sum of deviations: 42523302763.99998
[2025-06-04 08:40:42] 2025-06-04 06:33:54,013 | INFO     | mean x: 1749009845.0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,013 | INFO     | mean y: 2324782.1745454543
[2025-06-04 08:40:42] 2025-06-04 06:33:54,013 | INFO     | -- intersect: -11530839544.890495
[2025-06-04 08:40:42] 2025-06-04 06:33:54,014 | INFO     | intersect: -11530839544.890495
[2025-06-04 08:40:42] 2025-06-04 06:33:54,014 | INFO     | sufficient remaining disk space (1650487984128 B)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,015 | INFO     | chi2: 1.4577386431369361
[2025-06-04 08:40:42] 2025-06-04 06:33:54,015 | INFO     | current chi2=1.4577386431369361 (change=-0.03114358352154125 %)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,015 | INFO     | right removable region: 274
[2025-06-04 08:40:42] 2025-06-04 06:33:54,016 | INFO     | sum of square deviations: 6806862510.0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,018 | INFO     | sum of deviations: -11821366076.5
[2025-06-04 08:40:42] 2025-06-04 06:33:54,018 | INFO     | mean x: 1749010302.5
[2025-06-04 08:40:42] 2025-06-04 06:33:54,018 | INFO     | mean y: 2335147.1964285714
[2025-06-04 08:40:42] 2025-06-04 06:33:54,018 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,019 | INFO     | -- intersect: 3039812549.8981476
[2025-06-04 08:40:42] 2025-06-04 06:33:54,019 | INFO     | intersect: 3039812549.8981476
[2025-06-04 08:40:42] 2025-06-04 06:33:54,019 | INFO     | chi2: 0.7140237970134226
[2025-06-04 08:40:42] 2025-06-04 06:33:54,020 | INFO     | current chi2=0.7140237970134226 (change=66.35753488076062 %)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,020 | INFO     | sum of square deviations: 6448679050.0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,022 | INFO     | sum of deviations: -11743894338.0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,023 | INFO     | mean x: 1749010455.0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,023 | INFO     | mean y: 2335136.76
[2025-06-04 08:40:42] 2025-06-04 06:33:54,023 | INFO     | -- intersect: 3187513654.766305
[2025-06-04 08:40:42] 2025-06-04 06:33:54,023 | INFO     | intersect: 3187513654.766305
[2025-06-04 08:40:42] 2025-06-04 06:33:54,023 | INFO     | chi2: 0.6832871638454779
[2025-06-04 08:40:42] 2025-06-04 06:33:54,024 | INFO     | current chi2=0.6832871638454779 (change=4.304707111514774 %)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,024 | INFO     | left removable region: 20
[2025-06-04 08:40:42] 2025-06-04 06:33:54,024 | INFO     | sum of square deviations: 5081276667.5
[2025-06-04 08:40:42] 2025-06-04 06:33:54,026 | INFO     | sum of deviations: 6646690265.5
[2025-06-04 08:40:42] 2025-06-04 06:33:54,026 | INFO     | mean x: 1749010424.5
[2025-06-04 08:40:42] 2025-06-04 06:33:54,026 | INFO     | mean y: 2340317.0354330707
[2025-06-04 08:40:42] 2025-06-04 06:33:54,027 | INFO     | -- intersect: -2285496249.1442556
[2025-06-04 08:40:42] 2025-06-04 06:33:54,027 | INFO     | intersect: -2285496249.1442556
[2025-06-04 08:40:42] 2025-06-04 06:33:54,027 | INFO     | chi2: 0.0006202798573922934
[2025-06-04 08:40:42] 2025-06-04 06:33:54,027 | INFO     | -- intersect: -2285496249.1442556
[2025-06-04 08:40:42] 2025-06-04 06:33:54,028 | INFO     | current memory leak: 1.31 B/s (using 254 data points, chi2=0.00)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,028 | INFO     | ..............................
[2025-06-04 08:40:42] 2025-06-04 06:33:54,028 | INFO     | . Timing measurements:
[2025-06-04 08:40:42] 2025-06-04 06:33:54,029 | INFO     | . get job = 0 s
[2025-06-04 08:40:42] 2025-06-04 06:33:54,029 | INFO     | . initial setup = 1 s
[2025-06-04 08:40:42] 2025-06-04 06:33:54,029 | INFO     | . payload setup = 7 s
[2025-06-04 08:40:42] 2025-06-04 06:33:54,029 | INFO     | . stage-in = 0 s
[2025-06-04 08:40:42] 2025-06-04 06:33:54,029 | INFO     | . payload execution = 17337 s
[2025-06-04 08:40:42] 2025-06-04 06:33:54,029 | INFO     | . stage-out = 1 s
[2025-06-04 08:40:42] 2025-06-04 06:33:54,030 | INFO     | . log creation = 0 s
[2025-06-04 08:40:42] 2025-06-04 06:33:54,030 | INFO     | ..............................
[2025-06-04 08:40:42] 2025-06-04 06:33:54,103 | INFO     | size of work directory /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6667580010: 2741518 B (within 2537553920 B limit)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,134 | INFO     | pfn file=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6667580010/HITS.44871837._073074.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,140 | INFO     | total size of present files: 0 B (workdir size: 2741518 B)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,145 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6667580010/HITS.44871837._073074.pool.root.1 since it does not exist
[2025-06-04 08:40:42] 2025-06-04 06:33:54,145 | INFO     | 
[2025-06-04 08:40:42] 2025-06-04 06:33:54,145 | INFO     | job summary report
[2025-06-04 08:40:42] 2025-06-04 06:33:54,145 | INFO     | --------------------------------------------------
[2025-06-04 08:40:42] 2025-06-04 06:33:54,145 | INFO     | PanDA job id: 6667580010
[2025-06-04 08:40:42] 2025-06-04 06:33:54,146 | INFO     | task id: 44871837
[2025-06-04 08:40:42] 2025-06-04 06:33:54,146 | INFO     | errors: (none)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:40:42] 2025-06-04 06:33:54,146 | INFO     | pilot state: finished 
[2025-06-04 08:40:42] 2025-06-04 06:33:54,146 | INFO     | transexitcode: 0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,146 | INFO     | exeerrorcode: 0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,146 | INFO     | exeerrordiag: 
[2025-06-04 08:40:42] 2025-06-04 06:33:54,147 | INFO     | exitcode: 0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,147 | INFO     | exitmsg: OK
[2025-06-04 08:40:42] 2025-06-04 06:33:54,147 | INFO     | cpuconsumptiontime: 66355 s
[2025-06-04 08:40:42] 2025-06-04 06:33:54,147 | INFO     | nevents: 400
[2025-06-04 08:40:42] 2025-06-04 06:33:54,147 | INFO     | neventsw: 0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,147 | INFO     | pid: 1575606
[2025-06-04 08:40:42] 2025-06-04 06:33:54,147 | INFO     | pgrp: 1575606
[2025-06-04 08:40:42] 2025-06-04 06:33:54,148 | INFO     | corecount: 4
[2025-06-04 08:40:42] 2025-06-04 06:33:54,148 | INFO     | event service: False
[2025-06-04 08:40:42] 2025-06-04 06:33:54,148 | INFO     | sizes: {0: 2405074, 1: 2405273, 5: 2405479, 12: 2405535, 17348: 2437158, 17350: 2446121, 17351: 2446305, 17358: 2446503}
[2025-06-04 08:40:42] 2025-06-04 06:33:54,148 | INFO     | --------------------------------------------------
[2025-06-04 08:40:42] 2025-06-04 06:33:54,148 | INFO     | 
[2025-06-04 08:40:42] 2025-06-04 06:33:54,148 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-04 08:40:42] 2025-06-04 06:33:54,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:40:42] 2025-06-04 06:33:54,169 | INFO     | job 6667580010 has completed (purged errors)
[2025-06-04 08:40:42] 2025-06-04 06:33:54,169 | INFO     | overall cleanup function is called
[2025-06-04 08:40:42] 2025-06-04 06:33:54,447 | INFO     | number of running child processes to parent process 1575606: 1
[2025-06-04 08:40:42] 2025-06-04 06:33:54,448 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:40:42] 2025-06-04 06:33:54,448 | INFO     | aborting job monitoring since job object (job id=6667580010) has expired
[2025-06-04 08:40:42] 2025-06-04 06:33:55,178 | INFO     | --- collectZombieJob: --- 10, [1575606]
[2025-06-04 08:40:42] 2025-06-04 06:33:55,178 | INFO     | zombie collector waiting for pid 1575606
[2025-06-04 08:40:42] 2025-06-04 06:33:55,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:40:42] 2025-06-04 06:33:55,179 | INFO     | collected zombie processes
[2025-06-04 08:40:42] 2025-06-04 06:33:55,179 | INFO     | will attempt to kill all subprocesses of pid=1575606
[2025-06-04 08:40:42] 2025-06-04 06:33:55,461 | INFO     | process IDs to be killed: [1575606] (in reverse order)
[2025-06-04 08:40:42] 2025-06-04 06:33:55,538 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:40:42] 2025-06-04 06:33:55,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:40:42] 2025-06-04 06:33:55,546 | INFO     | did not find any defunct processes belonging to 1575606
[2025-06-04 08:40:42] 2025-06-04 06:33:55,553 | INFO     | did not find any defunct processes belonging to 1575606
[2025-06-04 08:40:42] 2025-06-04 06:33:55,553 | INFO     | ready for new job
[2025-06-04 08:40:42] 2025-06-04 06:33:55,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:40:42] 2025-06-04 06:33:55,555 | INFO     | **************************************
[2025-06-04 08:40:42] 2025-06-04 06:33:55,556 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:40:42] 2025-06-04 06:33:55,556 | INFO     | **************************************
[2025-06-04 08:40:42] 2025-06-04 06:33:55,556 | INFO     | 
[2025-06-04 08:40:42] 2025-06-04 06:33:55,559 | INFO     | architecture information:
[2025-06-04 08:40:42] 2025-06-04 06:33:55,559 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:40:42] 2025-06-04 06:33:55,571 | INFO     | cat /etc/os-release:
[2025-06-04 08:40:42] NAME="CentOS Linux"
[2025-06-04 08:40:42] VERSION="7 (Core)"
[2025-06-04 08:40:42] ID="centos"
[2025-06-04 08:40:42] ID_LIKE="rhel fedora"
[2025-06-04 08:40:42] VERSION_ID="7"
[2025-06-04 08:40:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:40:42] ANSI_COLOR="0;31"
[2025-06-04 08:40:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:40:42] HOME_URL="https://www.centos.org/"
[2025-06-04 08:40:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:40:42] 
[2025-06-04 08:40:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:40:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:40:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:40:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:40:42] 
[2025-06-04 08:40:42] 2025-06-04 06:33:55,571 | INFO     | **************************************
[2025-06-04 08:40:42] 2025-06-04 06:33:56,074 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-04 08:40:42] 2025-06-04 06:33:56,087 | INFO     | sufficient remaining disk space (1650271977472 B)
[2025-06-04 08:40:42] 2025-06-04 06:33:56,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:40:42] 2025-06-04 06:33:56,088 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:40:42] 2025-06-04 06:33:56,088 | INFO     | update_server=False
[2025-06-04 08:40:42] 2025-06-04 06:33:56,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:40:42] 2025-06-04 06:33:56,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:40:42] 2025-06-04 06:33:56,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:40:42] 2025-06-04 06:33:56,089 | INFO     | aborting loop
[2025-06-04 08:40:42] 2025-06-04 06:33:56,139 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:40:42] 2025-06-04 06:33:56,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:40:42] 2025-06-04 06:33:56,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:40:42] 2025-06-04 06:33:56,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:40:42] 2025-06-04 06:33:56,478 | INFO     | all payload control threads have been joined
[2025-06-04 08:40:42] 2025-06-04 06:33:56,671 | INFO     | all data control threads have been joined
[2025-06-04 08:40:42] 2025-06-04 06:33:57,093 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:57,094 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:57,094 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:57,427 | INFO     | [job] validate thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:57,483 | INFO     | [payload] control thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:57,485 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:57,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:40:42] 2025-06-04 06:33:57,676 | INFO     | [data] control thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:57,780 | INFO     | all job control threads have been joined
[2025-06-04 08:40:42] 2025-06-04 06:33:57,818 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:57,934 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:58,346 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:58,419 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:58,458 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:58,522 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:33:58,784 | INFO     | [job] control thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:34:01,633 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:34:06,484 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:40:42] 2025-06-04 06:34:07,489 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:40:42] 2025-06-04 06:34:08,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23390905804608)>', '<ExcThread(monitor, started 23390668687104)>']
[2025-06-04 08:40:42] 2025-06-04 06:34:08,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:40:42] 2025-06-04 06:34:08,200 | INFO     | [monitor] control thread has ended
[2025-06-04 08:40:42] 2025-06-04 06:34:13,219 | INFO     | all workflow threads have been joined
[2025-06-04 08:40:42] 2025-06-04 06:34:13,219 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:40:42] 2025-06-04 06:34:13,219 | INFO     | traces error code: 0
[2025-06-04 08:40:42] 2025-06-04 06:34:13,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:40:42] 2025-06-04 06:34:13,339 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:40:42] 2025-06-04 06:34:13,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:40:42] 2025-06-04 06:34:13,344 [wrapper] pilotpid: 1568854
[2025-06-04 08:40:42] 2025-06-04 06:34:13,347 [wrapper] Pilot exit status: 0
[2025-06-04 08:40:42] 2025-06-04 06:34:13,356 [wrapper] pandaids: 6667580010
[2025-06-04 08:40:42] 2025-06-04 06:34:13,406 [wrapper] cleanup supervisor_pilot 1866870 1568855
[2025-06-04 08:40:42] 2025-06-04 06:34:13,408 [wrapper] Test setup, not cleaning
[2025-06-04 08:40:42] 2025-06-04 06:34:13,411 [wrapper] apfmon messages muted
[2025-06-04 08:40:42] 2025-06-04 06:34:13,413 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:40:42] 2025-06-04 06:34:13,416 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:40:42]  *** Error codes and diagnostics ***
[2025-06-04 08:40:42]     "exeErrorCode": 0,
[2025-06-04 08:40:42]     "exeErrorDiag": "",
[2025-06-04 08:40:42]     "pilotErrorCode": 0,
[2025-06-04 08:40:42]     "pilotErrorDiag": "",
[2025-06-04 08:40:42]  *** Listing of results directory ***
[2025-06-04 08:40:42] total 417392
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc    495897 May 27 21:34 pilot3.tar.gz
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc      5111 May 27 22:26 queuedata.json
[2025-06-04 08:40:42] -rwx------ 1 boinc boinc     37140 May 27 22:30 runpilot2-wrapper.sh
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc       100 Jun  4 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:40:42] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 03:44 run_atlas
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc       105 Jun  4 03:44 job.xml
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc      6419 Jun  4 03:44 init_data.xml
[2025-06-04 08:40:42] -rw-r--r-- 2 boinc boinc 222641986 Jun  4 03:44 EVNT.44871834._002866.pool.root.1
[2025-06-04 08:40:42] drwxrwx--x 2 boinc boinc      4096 Jun  4 03:44 shared
[2025-06-04 08:40:42] -rw-r--r-- 2 boinc boinc    508881 Jun  4 03:44 input.tar.gz
[2025-06-04 08:40:42] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:44 start_atlas.sh
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc         0 Jun  4 03:44 boinc_lockfile
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc      2559 Jun  4 03:44 pandaJob.out
[2025-06-04 08:40:42] -rw------- 1 boinc boinc    986069 Jun  4 03:44 agis_schedconf.cvmfs.json
[2025-06-04 08:40:42] drwx------ 4 boinc boinc      4096 Jun  4 03:44 pilot3
[2025-06-04 08:40:42] -rw------- 1 boinc boinc 196961865 Jun  4 08:33 HITS.44871837._073074.pool.root.1
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc       529 Jun  4 08:33 boinc_task_state.xml
[2025-06-04 08:40:42] -rw------- 1 boinc boinc      1037 Jun  4 08:33 memory_monitor_summary.json
[2025-06-04 08:40:42] -rw------- 1 boinc boinc        95 Jun  4 08:33 pilot_heartbeat.json
[2025-06-04 08:40:42] -rw------- 1 boinc boinc   1603667 Jun  4 08:33 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:40:42] -rw------- 1 boinc boinc    367677 Jun  4 08:33 log.44871837._073074.job.log.tgz.1
[2025-06-04 08:40:42] -rw------- 1 boinc boinc      7726 Jun  4 08:33 heartbeat.json
[2025-06-04 08:40:42] -rw------- 1 boinc boinc      4436 Jun  4 08:34 pilotlog.txt
[2025-06-04 08:40:42] -rw------- 1 boinc boinc   1616175 Jun  4 08:34 log.44871837._073074.job.log.1
[2025-06-04 08:40:42] -rw------- 1 boinc boinc       357 Jun  4 08:34 output.list
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc       620 Jun  4 08:34 runtime_log
[2025-06-04 08:40:42] -rw------- 1 boinc boinc   2007040 Jun  4 08:34 result.tar.gz
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc      9026 Jun  4 08:34 runtime_log.err
[2025-06-04 08:40:42] -rw------- 1 boinc boinc       666 Jun  4 08:34 2C3KDmi7Fe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2KaKDmV1yUEm.diag
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc        26 Jun  4 08:40 wrapper_checkpoint.txt
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc      8192 Jun  4 08:40 boinc_mmap_file
[2025-06-04 08:40:42] -rw-r--r-- 1 boinc boinc     20974 Jun  4 08:40 stderr.txt
[2025-06-04 08:40:42] HITS file was successfully produced:
[2025-06-04 08:40:42] -rw------- 1 boinc boinc 196961865 Jun  4 08:33 shared/HITS.pool.root.1
[2025-06-04 08:40:42]  *** Contents of shared directory: ***
[2025-06-04 08:40:42] total 412256
[2025-06-04 08:40:42] -rw-r--r-- 2 boinc boinc 222641986 Jun  4 03:44 ATLAS.root_0
[2025-06-04 08:40:42] -rw-r--r-- 2 boinc boinc    508881 Jun  4 03:44 input.tar.gz
[2025-06-04 08:40:42] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:44 start_atlas.sh
[2025-06-04 08:40:42] -rw------- 1 boinc boinc 196961865 Jun  4 08:33 HITS.pool.root.1
[2025-06-04 08:40:42] -rw------- 1 boinc boinc   2007040 Jun  4 08:34 result.tar.gz
08:40:44 (1564916): run_atlas exited; CPU time 67001.749709
08:40:44 (1564916): called boinc_finish(0)

</stderr_txt>
]]>

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