Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:02:13 (1603910): wrapper (7.7.26015): starting
04:02:13 (1603910): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 04:02:13] Arguments: --nthreads 4
[2025-06-04 04:02:13] Threads: 4
[2025-06-04 04:02:13] Checking for CVMFS
[2025-06-04 04:02:13] No cvmfs_config command found, will try listing directly
[2025-06-04 04:02:13] CVMFS is ok
[2025-06-04 04:02:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:02:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:02:13] Further information can be found at the LHC@home message board.
[2025-06-04 04:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:02:13] Checking for apptainer binary...
[2025-06-04 04:02:13] which: no apptainer in ((null))
[2025-06-04 04:02:13] apptainer is not installed, using version from CVMFS
[2025-06-04 04:02:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:02:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-06-04 04:02:13] apptainer works
[2025-06-04 04:02:13] Set ATHENA_PROC_NUMBER=4
[2025-06-04 04:02:13] Set ATHENA_CORE_NUMBER=4
[2025-06-04 04:02:13] Starting ATLAS job with PandaID=6667732173
[2025-06-04 04:02:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:01:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:01:28] 2025-06-04 06:58:26,449 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:01:28] 2025-06-04 06:58:26,449 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:01:28] 2025-06-04 06:58:26,456 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:01:28] 2025-06-04 06:58:26,456 | INFO     | sum of square deviations: 7641036290.0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,459 | INFO     | sum of deviations: 15795769134.999994
[2025-06-04 09:01:28] 2025-06-04 06:58:26,459 | INFO     | mean x: 1749011414.0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,459 | INFO     | mean y: 2341728.8075601375
[2025-06-04 09:01:28] 2025-06-04 06:58:26,459 | INFO     | -- intersect: -3613264775.5326905
[2025-06-04 09:01:28] 2025-06-04 06:58:26,460 | INFO     | intersect: -3613264775.5326905
[2025-06-04 09:01:28] 2025-06-04 06:58:26,460 | INFO     | chi2: 1.708387454109935
[2025-06-04 09:01:28] 2025-06-04 06:58:26,461 | INFO     | sum of square deviations: 7253894147.5
[2025-06-04 09:01:28] 2025-06-04 06:58:26,461 | INFO     | sufficient remaining disk space (1649701552128 B)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,464 | INFO     | sum of deviations: 15309159599.50001
[2025-06-04 09:01:28] 2025-06-04 06:58:26,464 | INFO     | mean x: 1749011261.5
[2025-06-04 09:01:28] 2025-06-04 06:58:26,464 | INFO     | mean y: 2341536.9125874126
[2025-06-04 09:01:28] 2025-06-04 06:58:26,464 | INFO     | -- intersect: -3688902365.902627
[2025-06-04 09:01:28] 2025-06-04 06:58:26,465 | INFO     | intersect: -3688902365.902627
[2025-06-04 09:01:28] 2025-06-04 06:58:26,465 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,465 | INFO     | chi2: 1.7086949605003634
[2025-06-04 09:01:28] 2025-06-04 06:58:26,466 | INFO     | current chi2=1.7086949605003634 (change=-0.017999803831884476 %)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,466 | INFO     | right removable region: 285
[2025-06-04 09:01:28] 2025-06-04 06:58:26,466 | INFO     | sum of square deviations: 7253894147.5
[2025-06-04 09:01:28] 2025-06-04 06:58:26,469 | INFO     | sum of deviations: -31956701898.999992
[2025-06-04 09:01:28] 2025-06-04 06:58:26,469 | INFO     | mean x: 1749011566.5
[2025-06-04 09:01:28] 2025-06-04 06:58:26,469 | INFO     | mean y: 2360416.230769231
[2025-06-04 09:01:28] 2025-06-04 06:58:26,469 | INFO     | -- intersect: 7707551602.099739
[2025-06-04 09:01:28] 2025-06-04 06:58:26,469 | INFO     | intersect: 7707551602.099739
[2025-06-04 09:01:28] 2025-06-04 06:58:26,470 | INFO     | chi2: 0.08046239284234581
[2025-06-04 09:01:28] 2025-06-04 06:58:26,470 | INFO     | current chi2=0.08046239284234581 (change=95.29015548265856 %)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,470 | INFO     | sum of square deviations: 6880054580.0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,473 | INFO     | sum of deviations: -28251919480.999996
[2025-06-04 09:01:28] 2025-06-04 06:58:26,473 | INFO     | mean x: 1749011719.0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,473 | INFO     | mean y: 2358896.619217082
[2025-06-04 09:01:28] 2025-06-04 06:58:26,473 | INFO     | -- intersect: 7184415039.044965
[2025-06-04 09:01:28] 2025-06-04 06:58:26,473 | INFO     | intersect: 7184415039.044965
[2025-06-04 09:01:28] 2025-06-04 06:58:26,474 | INFO     | chi2: 0.07549942307687958
[2025-06-04 09:01:28] 2025-06-04 06:58:26,474 | INFO     | current chi2=0.07549942307687958 (change=6.168061364009441 %)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,474 | INFO     | left removable region: 20
[2025-06-04 09:01:28] 2025-06-04 06:58:26,474 | INFO     | sum of square deviations: 5770452380.0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,476 | INFO     | sum of deviations: -17635558597.999992
[2025-06-04 09:01:28] 2025-06-04 06:58:26,477 | INFO     | mean x: 1749011841.0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,477 | INFO     | mean y: 2354419.128301887
[2025-06-04 09:01:28] 2025-06-04 06:58:26,477 | INFO     | -- intersect: 5347654714.380257
[2025-06-04 09:01:28] 2025-06-04 06:58:26,477 | INFO     | intersect: 5347654714.380257
[2025-06-04 09:01:28] 2025-06-04 06:58:26,477 | INFO     | chi2: 0.05860131130142044
[2025-06-04 09:01:28] 2025-06-04 06:58:26,478 | INFO     | -- intersect: 5347654714.380257
[2025-06-04 09:01:28] 2025-06-04 06:58:26,478 | INFO     | current memory leak: -3.06 B/s (using 265 data points, chi2=0.06)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,479 | INFO     | ..............................
[2025-06-04 09:01:28] 2025-06-04 06:58:26,479 | INFO     | . Timing measurements:
[2025-06-04 09:01:28] 2025-06-04 06:58:26,479 | INFO     | . get job = 0 s
[2025-06-04 09:01:28] 2025-06-04 06:58:26,479 | INFO     | . initial setup = 1 s
[2025-06-04 09:01:28] 2025-06-04 06:58:26,479 | INFO     | . payload setup = 6 s
[2025-06-04 09:01:28] 2025-06-04 06:58:26,479 | INFO     | . stage-in = 0 s
[2025-06-04 09:01:28] 2025-06-04 06:58:26,479 | INFO     | . payload execution = 17730 s
[2025-06-04 09:01:28] 2025-06-04 06:58:26,479 | INFO     | . stage-out = 1 s
[2025-06-04 09:01:28] 2025-06-04 06:58:26,480 | INFO     | . log creation = 0 s
[2025-06-04 09:01:28] 2025-06-04 06:58:26,480 | INFO     | ..............................
[2025-06-04 09:01:28] 2025-06-04 06:58:26,574 | INFO     | size of work directory /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6667732173: 3060762 B (within 2537553920 B limit)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,594 | INFO     | 
[2025-06-04 09:01:28] 2025-06-04 06:58:26,594 | INFO     | pfn file=/scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6667732173/HITS.44871837._075607.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,594 | INFO     | job summary report
[2025-06-04 09:01:28] 2025-06-04 06:58:26,595 | INFO     | total size of present files: 0 B (workdir size: 3060762 B)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,595 | INFO     | --------------------------------------------------
[2025-06-04 09:01:28] 2025-06-04 06:58:26,595 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6667732173/HITS.44871837._075607.pool.root.1 since it does not exist
[2025-06-04 09:01:28] 2025-06-04 06:58:26,595 | INFO     | PanDA job id: 6667732173
[2025-06-04 09:01:28] 2025-06-04 06:58:26,595 | INFO     | task id: 44871837
[2025-06-04 09:01:28] 2025-06-04 06:58:26,596 | INFO     | errors: (none)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,596 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:01:28] 2025-06-04 06:58:26,596 | INFO     | pilot state: finished 
[2025-06-04 09:01:28] 2025-06-04 06:58:26,596 | INFO     | transexitcode: 0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,596 | INFO     | exeerrorcode: 0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,596 | INFO     | exeerrordiag: 
[2025-06-04 09:01:28] 2025-06-04 06:58:26,596 | INFO     | exitcode: 0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | exitmsg: OK
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | cpuconsumptiontime: 68354 s
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | nevents: 400
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | neventsw: 0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | pid: 1625505
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | pgrp: 1625505
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | corecount: 4
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | event service: False
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | sizes: {0: 2405074, 1: 2405273, 5: 2405479, 12: 2405535, 17740: 2437442, 17743: 2446589, 17749: 2446703}
[2025-06-04 09:01:28] 2025-06-04 06:58:26,597 | INFO     | --------------------------------------------------
[2025-06-04 09:01:28] 2025-06-04 06:58:26,598 | INFO     | 
[2025-06-04 09:01:28] 2025-06-04 06:58:26,598 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-06-04 09:01:28] 2025-06-04 06:58:26,617 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,618 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,620 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,620 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:01:28] 2025-06-04 06:58:26,620 | INFO     | job 6667732173 has completed (purged errors)
[2025-06-04 09:01:28] 2025-06-04 06:58:26,620 | INFO     | overall cleanup function is called
[2025-06-04 09:01:28] 2025-06-04 06:58:26,889 | INFO     | number of running child processes to parent process 1625505: 1
[2025-06-04 09:01:28] 2025-06-04 06:58:26,889 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:01:28] 2025-06-04 06:58:26,889 | INFO     | aborting job monitoring since job object (job id=6667732173) has expired
[2025-06-04 09:01:28] 2025-06-04 06:58:27,629 | INFO     | --- collectZombieJob: --- 10, [1625505]
[2025-06-04 09:01:28] 2025-06-04 06:58:27,630 | INFO     | zombie collector waiting for pid 1625505
[2025-06-04 09:01:28] 2025-06-04 06:58:27,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:01:28] 2025-06-04 06:58:27,630 | INFO     | collected zombie processes
[2025-06-04 09:01:28] 2025-06-04 06:58:27,630 | INFO     | will attempt to kill all subprocesses of pid=1625505
[2025-06-04 09:01:28] 2025-06-04 06:58:28,103 | INFO     | PID=1610166 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 09:01:28] 2025-06-04 06:58:28,103 | INFO     | .. there are 5 such processes running
[2025-06-04 09:01:28] 2025-06-04 06:58:28,170 | INFO     | process IDs to be killed: [1625505] (in reverse order)
[2025-06-04 09:01:28] 2025-06-04 06:58:28,253 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:01:28] 2025-06-04 06:58:28,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:01:28] 2025-06-04 06:58:28,262 | INFO     | did not find any defunct processes belonging to 1625505
[2025-06-04 09:01:28] 2025-06-04 06:58:28,269 | INFO     | did not find any defunct processes belonging to 1625505
[2025-06-04 09:01:28] 2025-06-04 06:58:28,270 | INFO     | ready for new job
[2025-06-04 09:01:28] 2025-06-04 06:58:28,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:01:28] 2025-06-04 06:58:28,272 | INFO     | **************************************
[2025-06-04 09:01:28] 2025-06-04 06:58:28,272 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:01:28] 2025-06-04 06:58:28,272 | INFO     | **************************************
[2025-06-04 09:01:28] 2025-06-04 06:58:28,272 | INFO     | 
[2025-06-04 09:01:28] 2025-06-04 06:58:28,275 | INFO     | architecture information:
[2025-06-04 09:01:28] 2025-06-04 06:58:28,275 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:01:28] 2025-06-04 06:58:28,290 | INFO     | cat /etc/os-release:
[2025-06-04 09:01:28] NAME="CentOS Linux"
[2025-06-04 09:01:28] VERSION="7 (Core)"
[2025-06-04 09:01:28] ID="centos"
[2025-06-04 09:01:28] ID_LIKE="rhel fedora"
[2025-06-04 09:01:28] VERSION_ID="7"
[2025-06-04 09:01:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:01:28] ANSI_COLOR="0;31"
[2025-06-04 09:01:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:01:28] HOME_URL="https://www.centos.org/"
[2025-06-04 09:01:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:01:28] 
[2025-06-04 09:01:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:01:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:01:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:01:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:01:28] 
[2025-06-04 09:01:28] 2025-06-04 06:58:28,290 | INFO     | **************************************
[2025-06-04 09:01:28] 2025-06-04 06:58:28,793 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-06-04 09:01:28] 2025-06-04 06:58:28,806 | INFO     | sufficient remaining disk space (1649705746432 B)
[2025-06-04 09:01:28] 2025-06-04 06:58:28,806 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:01:28] 2025-06-04 06:58:28,806 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:01:28] 2025-06-04 06:58:28,807 | INFO     | update_server=False
[2025-06-04 09:01:28] 2025-06-04 06:58:28,807 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:01:28] 2025-06-04 06:58:28,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:01:28] 2025-06-04 06:58:28,807 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:01:28] 2025-06-04 06:58:28,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:01:28] 2025-06-04 06:58:28,808 | INFO     | aborting loop
[2025-06-04 09:01:28] 2025-06-04 06:58:28,808 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:01:28] 2025-06-04 06:58:28,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:01:28] 2025-06-04 06:58:28,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:01:28] 2025-06-04 06:58:29,232 | INFO     | all job control threads have been joined
[2025-06-04 09:01:28] 2025-06-04 06:58:29,652 | INFO     | all data control threads have been joined
[2025-06-04 09:01:28] 2025-06-04 06:58:29,809 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:29,813 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:29,927 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:29,986 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:30,062 | INFO     | all payload control threads have been joined
[2025-06-04 09:01:28] 2025-06-04 06:58:30,238 | INFO     | [job] control thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:30,657 | INFO     | [data] control thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:30,789 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:30,791 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:30,813 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:30,964 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:31,067 | INFO     | [payload] control thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:31,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:01:28] 2025-06-04 06:58:31,260 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:31,271 | INFO     | [job] validate thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:31,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:01:28] 2025-06-04 06:58:32,608 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:35,240 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:39,497 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:01:28] 2025-06-04 06:58:40,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:01:28] 2025-06-04 06:58:40,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22908380858176)>', '<ExcThread(monitor, started 22907937863424)>']
[2025-06-04 09:01:28] 2025-06-04 06:58:40,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:01:28] 2025-06-04 06:58:40,863 | INFO     | [monitor] control thread has ended
[2025-06-04 09:01:28] 2025-06-04 06:58:45,680 | INFO     | all workflow threads have been joined
[2025-06-04 09:01:28] 2025-06-04 06:58:45,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:01:28] 2025-06-04 06:58:45,681 | INFO     | traces error code: 0
[2025-06-04 09:01:28] 2025-06-04 06:58:45,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:01:28] 2025-06-04 06:58:45,832 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:01:28] 2025-06-04 06:58:45,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:01:28] 2025-06-04 06:58:45,836 [wrapper] pilotpid: 1610166
[2025-06-04 09:01:28] 2025-06-04 06:58:45,838 [wrapper] Pilot exit status: 0
[2025-06-04 09:01:28] 2025-06-04 06:58:45,847 [wrapper] pandaids: 6667732173
[2025-06-04 09:01:28] 2025-06-04 06:58:45,894 [wrapper] cleanup supervisor_pilot 1900164 1610167
[2025-06-04 09:01:28] 2025-06-04 06:58:45,897 [wrapper] Test setup, not cleaning
[2025-06-04 09:01:28] 2025-06-04 06:58:45,899 [wrapper] apfmon messages muted
[2025-06-04 09:01:28] 2025-06-04 06:58:45,901 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:01:28] 2025-06-04 06:58:45,903 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:01:28]  *** Error codes and diagnostics ***
[2025-06-04 09:01:28]     "exeErrorCode": 0,
[2025-06-04 09:01:28]     "exeErrorDiag": "",
[2025-06-04 09:01:28]     "pilotErrorCode": 0,
[2025-06-04 09:01:28]     "pilotErrorDiag": "",
[2025-06-04 09:01:28]  *** Listing of results directory ***
[2025-06-04 09:01:28] total 421584
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc    495897 May 28 01:30 pilot3.tar.gz
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc      5111 May 28 02:10 queuedata.json
[2025-06-04 09:01:28] -rwx------ 1 boinc boinc     37140 May 28 02:16 runpilot2-wrapper.sh
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc       100 Jun  4 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:01:28] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 04:02 run_atlas
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc       105 Jun  4 04:02 job.xml
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc      6419 Jun  4 04:02 init_data.xml
[2025-06-04 09:01:28] -rw-r--r-- 2 boinc boinc 224928120 Jun  4 04:02 EVNT.44871834._002962.pool.root.1
[2025-06-04 09:01:28] drwxrwx--x 2 boinc boinc      4096 Jun  4 04:02 shared
[2025-06-04 09:01:28] -rw-r--r-- 2 boinc boinc    508882 Jun  4 04:02 input.tar.gz
[2025-06-04 09:01:28] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:02 start_atlas.sh
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc         0 Jun  4 04:02 boinc_lockfile
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc      2559 Jun  4 04:02 pandaJob.out
[2025-06-04 09:01:28] -rw------- 1 boinc boinc    986077 Jun  4 04:02 agis_schedconf.cvmfs.json
[2025-06-04 09:01:28] drwx------ 4 boinc boinc      4096 Jun  4 04:02 pilot3
[2025-06-04 09:01:28] -rw------- 1 boinc boinc 198894582 Jun  4 08:57 HITS.44871837._075607.pool.root.1
[2025-06-04 09:01:28] -rw------- 1 boinc boinc        95 Jun  4 08:57 pilot_heartbeat.json
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc       529 Jun  4 08:58 boinc_task_state.xml
[2025-06-04 09:01:28] -rw------- 1 boinc boinc      1036 Jun  4 08:58 memory_monitor_summary.json
[2025-06-04 09:01:28] -rw------- 1 boinc boinc   1603667 Jun  4 08:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:01:28] -rw------- 1 boinc boinc    377553 Jun  4 08:58 log.44871837._075607.job.log.tgz.1
[2025-06-04 09:01:28] -rw------- 1 boinc boinc      7733 Jun  4 08:58 heartbeat.json
[2025-06-04 09:01:28] -rw------- 1 boinc boinc      4559 Jun  4 08:58 pilotlog.txt
[2025-06-04 09:01:28] -rw------- 1 boinc boinc   1640692 Jun  4 08:58 log.44871837._075607.job.log.1
[2025-06-04 09:01:28] -rw------- 1 boinc boinc       357 Jun  4 08:58 output.list
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc       620 Jun  4 08:58 runtime_log
[2025-06-04 09:01:28] -rw------- 1 boinc boinc   2037760 Jun  4 08:58 result.tar.gz
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc      9026 Jun  4 08:58 runtime_log.err
[2025-06-04 09:01:28] -rw------- 1 boinc boinc       665 Jun  4 08:58 o66LDmLeJe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmClaKDmqtuaMm.diag
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc      8192 Jun  4 09:01 boinc_mmap_file
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc        26 Jun  4 09:01 wrapper_checkpoint.txt
[2025-06-04 09:01:28] -rw-r--r-- 1 boinc boinc     21181 Jun  4 09:01 stderr.txt
[2025-06-04 09:01:28] HITS file was successfully produced:
[2025-06-04 09:01:28] -rw------- 1 boinc boinc 198894582 Jun  4 08:57 shared/HITS.pool.root.1
[2025-06-04 09:01:28]  *** Contents of shared directory: ***
[2025-06-04 09:01:28] total 416412
[2025-06-04 09:01:28] -rw-r--r-- 2 boinc boinc 224928120 Jun  4 04:02 ATLAS.root_0
[2025-06-04 09:01:28] -rw-r--r-- 2 boinc boinc    508882 Jun  4 04:02 input.tar.gz
[2025-06-04 09:01:28] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:02 start_atlas.sh
[2025-06-04 09:01:28] -rw------- 1 boinc boinc 198894582 Jun  4 08:57 HITS.pool.root.1
[2025-06-04 09:01:28] -rw------- 1 boinc boinc   2037760 Jun  4 08:58 result.tar.gz
09:01:30 (1603910): run_atlas exited; CPU time 69007.817433
09:01:30 (1603910): called boinc_finish(0)

</stderr_txt>
]]>

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