Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:59:31 (10365): wrapper (7.7.26015): starting
18:59:31 (10365): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 18:59:31] Arguments: --nthreads 8
[2025-05-28 18:59:31] Threads: 8
[2025-05-28 18:59:31] Checking for CVMFS
[2025-05-28 18:59:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 18:59:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 18:59:31] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 18:59:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 18:59:31] 2.11.2.0 27995 23418 94668 146525 1 69 22259576 25165825 4096 130560 0 12773000 99.804 14251035 1760 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 18:59:31] CVMFS is ok
[2025-05-28 18:59:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 18:59:31] Checking for apptainer binary...
[2025-05-28 18:59:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 18:59:31] Running /usr/bin/apptainer --version
[2025-05-28 18:59:31] apptainer version 1.3.2-1.el7
[2025-05-28 18:59:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 18:59:33] cg-vwn460.simple-grid.lan
[2025-05-28 18:59:33] apptainer works
[2025-05-28 18:59:33] Set ATHENA_PROC_NUMBER=8
[2025-05-28 18:59:33] Set ATHENA_CORE_NUMBER=8
[2025-05-28 18:59:33] Starting ATLAS job with PandaID=6667730081
[2025-05-28 18:59:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 23:45:40]  *** The last 200 lines of the pilot log: ***
[2025-05-28 23:45:40] 2025-05-28 21:43:44,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:45:40] 2025-05-28 21:43:44,417 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:45:40] 2025-05-28 21:43:44,417 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:45:40] 2025-05-28 21:43:44,422 | INFO     | fitting pss+swap vs Time
[2025-05-28 23:45:40] 2025-05-28 21:43:44,423 | INFO     | sum of square deviations: 6590404498.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,425 | INFO     | sum of deviations: 19338712880.000008
[2025-05-28 23:45:40] 2025-05-28 21:43:44,425 | INFO     | mean x: 1748460058.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,426 | INFO     | mean y: 2483279.223826715
[2025-05-28 23:45:40] 2025-05-28 21:43:44,426 | INFO     | -- intersect: -5128152792.366534
[2025-05-28 23:45:40] 2025-05-28 21:43:44,426 | INFO     | intersect: -5128152792.366534
[2025-05-28 23:45:40] 2025-05-28 21:43:44,426 | INFO     | chi2: 2.2560276282890728
[2025-05-28 23:45:40] 2025-05-28 21:43:44,427 | INFO     | sum of square deviations: 6239923508.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,429 | INFO     | sum of deviations: 37217728334.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,429 | INFO     | mean x: 1748459905.5
[2025-05-28 23:45:40] 2025-05-28 21:43:44,429 | INFO     | mean y: 2490941.5
[2025-05-28 23:45:40] 2025-05-28 21:43:44,429 | INFO     | -- intersect: -10426115383.93996
[2025-05-28 23:45:40] 2025-05-28 21:43:44,429 | INFO     | intersect: -10426115383.93996
[2025-05-28 23:45:40] 2025-05-28 21:43:44,430 | INFO     | chi2: 1.4799126128840756
[2025-05-28 23:45:40] 2025-05-28 21:43:44,430 | INFO     | current chi2=1.4799126128840756 (change=34.40184001618755 %)
[2025-05-28 23:45:40] 2025-05-28 21:43:44,430 | INFO     | sum of square deviations: 5902093918.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,432 | INFO     | sum of deviations: 36396740801.99999
[2025-05-28 23:45:40] 2025-05-28 21:43:44,433 | INFO     | mean x: 1748459753.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,433 | INFO     | mean y: 2490570.8838951313
[2025-05-28 23:45:40] 2025-05-28 21:43:44,433 | INFO     | -- intersect: -10779824539.11262
[2025-05-28 23:45:40] 2025-05-28 21:43:44,433 | INFO     | intersect: -10779824539.11262
[2025-05-28 23:45:40] 2025-05-28 21:43:44,433 | INFO     | chi2: 1.4804640477474043
[2025-05-28 23:45:40] 2025-05-28 21:43:44,434 | INFO     | current chi2=1.4804640477474043 (change=-0.037261312494256245 %)
[2025-05-28 23:45:40] 2025-05-28 21:43:44,434 | INFO     | right removable region: 266
[2025-05-28 23:45:40] 2025-05-28 21:43:44,434 | INFO     | sum of square deviations: 6239923508.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,436 | INFO     | sum of deviations: -21575946257.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,437 | INFO     | mean x: 1748460210.5
[2025-05-28 23:45:40] 2025-05-28 21:43:44,437 | INFO     | mean y: 2500926.632352941
[2025-05-28 23:45:40] 2025-05-28 21:43:44,437 | INFO     | -- intersect: 6048197398.05309
[2025-05-28 23:45:40] 2025-05-28 21:43:44,437 | INFO     | intersect: 6048197398.05309
[2025-05-28 23:45:40] 2025-05-28 21:43:44,437 | INFO     | chi2: 0.8471906442093129
[2025-05-28 23:45:40] 2025-05-28 21:43:44,437 | INFO     | current chi2=0.8471906442093129 (change=62.44768310520179 %)
[2025-05-28 23:45:40] 2025-05-28 21:43:44,438 | INFO     | sum of square deviations: 5902093918.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,440 | INFO     | sum of deviations: -15495236042.999996
[2025-05-28 23:45:40] 2025-05-28 21:43:44,440 | INFO     | mean x: 1748460363.0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,440 | INFO     | mean y: 2498163.8689138577
[2025-05-28 23:45:40] 2025-05-28 21:43:44,440 | INFO     | -- intersect: 4592870057.797568
[2025-05-28 23:45:40] 2025-05-28 21:43:44,440 | INFO     | intersect: 4592870057.797568
[2025-05-28 23:45:40] 2025-05-28 21:43:44,441 | INFO     | chi2: 0.8219596803712858
[2025-05-28 23:45:40] 2025-05-28 21:43:44,441 | INFO     | current chi2=0.8219596803712858 (change=2.9781919819918836 %)
[2025-05-28 23:45:40] 2025-05-28 21:43:44,441 | INFO     | left removable region: 20
[2025-05-28 23:45:40] 2025-05-28 21:43:44,442 | INFO     | sum of square deviations: 4616114457.5
[2025-05-28 23:45:40] 2025-05-28 21:43:44,443 | INFO     | sum of deviations: 5118551358.000001
[2025-05-28 23:45:40] 2025-05-28 21:43:44,444 | INFO     | mean x: 1748460332.5
[2025-05-28 23:45:40] 2025-05-28 21:43:44,444 | INFO     | mean y: 2504845.1788617885
[2025-05-28 23:45:40] 2025-05-28 21:43:44,444 | INFO     | -- intersect: -1936265107.7165291
[2025-05-28 23:45:40] 2025-05-28 21:43:44,444 | INFO     | intersect: -1936265107.7165291
[2025-05-28 23:45:40] 2025-05-28 21:43:44,444 | INFO     | chi2: 0.0009735504264945026
[2025-05-28 23:45:40] 2025-05-28 21:43:44,444 | INFO     | -- intersect: -1936265107.7165291
[2025-05-28 23:45:40] 2025-05-28 21:43:44,445 | INFO     | current memory leak: 1.11 B/s (using 246 data points, chi2=0.00)
[2025-05-28 23:45:40] 2025-05-28 21:43:44,445 | INFO     | ..............................
[2025-05-28 23:45:40] 2025-05-28 21:43:44,446 | INFO     | . Timing measurements:
[2025-05-28 23:45:40] 2025-05-28 21:43:44,446 | INFO     | . get job = 0 s
[2025-05-28 23:45:40] 2025-05-28 21:43:44,446 | INFO     | . initial setup = 2 s
[2025-05-28 23:45:40] 2025-05-28 21:43:44,446 | INFO     | . payload setup = 11 s
[2025-05-28 23:45:40] 2025-05-28 21:43:44,446 | INFO     | . stage-in = 0 s
[2025-05-28 23:45:40] 2025-05-28 21:43:44,446 | INFO     | . payload execution = 16892 s
[2025-05-28 23:45:40] 2025-05-28 21:43:44,446 | INFO     | . stage-out = 3 s
[2025-05-28 23:45:40] 2025-05-28 21:43:44,446 | INFO     | . log creation = 1 s
[2025-05-28 23:45:40] 2025-05-28 21:43:44,446 | INFO     | ..............................
[2025-05-28 23:45:40] 2025-05-28 21:43:44,573 | INFO     | 
[2025-05-28 23:45:40] 2025-05-28 21:43:44,573 | INFO     | job summary report
[2025-05-28 23:45:40] 2025-05-28 21:43:44,573 | INFO     | --------------------------------------------------
[2025-05-28 23:45:40] 2025-05-28 21:43:44,573 | INFO     | PanDA job id: 6667730081
[2025-05-28 23:45:40] 2025-05-28 21:43:44,573 | INFO     | task id: 44871837
[2025-05-28 23:45:40] 2025-05-28 21:43:44,573 | INFO     | errors: (none)
[2025-05-28 23:45:40] 2025-05-28 21:43:44,573 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 23:45:40] 2025-05-28 21:43:44,573 | INFO     | pilot state: finished 
[2025-05-28 23:45:40] 2025-05-28 21:43:44,581 | INFO     | transexitcode: 0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,581 | INFO     | exeerrorcode: 0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,581 | INFO     | exeerrordiag: 
[2025-05-28 23:45:40] 2025-05-28 21:43:44,581 | INFO     | exitcode: 0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,581 | INFO     | exitmsg: OK
[2025-05-28 23:45:40] 2025-05-28 21:43:44,581 | INFO     | cpuconsumptiontime: 65253 s
[2025-05-28 23:45:40] 2025-05-28 21:43:44,581 | INFO     | nevents: 400
[2025-05-28 23:45:40] 2025-05-28 21:43:44,581 | INFO     | neventsw: 0
[2025-05-28 23:45:40] 2025-05-28 21:43:44,582 | INFO     | pid: 20614
[2025-05-28 23:45:40] 2025-05-28 21:43:44,582 | INFO     | pgrp: 20614
[2025-05-28 23:45:40] 2025-05-28 21:43:44,582 | INFO     | corecount: 8
[2025-05-28 23:45:40] 2025-05-28 21:43:44,582 | INFO     | event service: False
[2025-05-28 23:45:40] 2025-05-28 21:43:44,582 | INFO     | sizes: {0: 2405234, 1: 2405234, 10: 2405468, 12: 2405496, 16908: 2436463, 16912: 2445432, 16915: 2445616, 17014: 2445786}
[2025-05-28 23:45:40] 2025-05-28 21:43:44,582 | INFO     | --------------------------------------------------
[2025-05-28 23:45:40] 2025-05-28 21:43:44,582 | INFO     | 
[2025-05-28 23:45:40] 2025-05-28 21:43:44,582 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-05-28 23:45:40] 2025-05-28 21:43:45,046 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,048 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,048 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 23:45:40] 2025-05-28 21:43:45,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,048 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 23:45:40] 2025-05-28 21:43:45,048 | INFO     | job 6667730081 has completed (purged errors)
[2025-05-28 23:45:40] 2025-05-28 21:43:45,048 | INFO     | overall cleanup function is called
[2025-05-28 23:45:40] 2025-05-28 21:43:46,058 | INFO     | --- collectZombieJob: --- 10, [20614]
[2025-05-28 23:45:40] 2025-05-28 21:43:46,058 | INFO     | zombie collector waiting for pid 20614
[2025-05-28 23:45:40] 2025-05-28 21:43:46,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 23:45:40] 2025-05-28 21:43:46,058 | INFO     | collected zombie processes
[2025-05-28 23:45:40] 2025-05-28 21:43:46,058 | INFO     | will attempt to kill all subprocesses of pid=20614
[2025-05-28 23:45:40] 2025-05-28 21:43:46,183 | INFO     | process IDs to be killed: [20614] (in reverse order)
[2025-05-28 23:45:40] 2025-05-28 21:43:46,447 | INFO     | PID=14027 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-28 23:45:40] 2025-05-28 21:43:46,447 | INFO     | .. there are 9 such processes running
[2025-05-28 23:45:40] 2025-05-28 21:43:47,158 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 23:45:40] 2025-05-28 21:43:47,159 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 23:45:40] 2025-05-28 21:43:47,161 | INFO     | did not find any defunct processes belonging to 20614
[2025-05-28 23:45:40] 2025-05-28 21:43:47,164 | INFO     | did not find any defunct processes belonging to 20614
[2025-05-28 23:45:40] 2025-05-28 21:43:47,164 | INFO     | ready for new job
[2025-05-28 23:45:40] 2025-05-28 21:43:47,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 23:45:40] 2025-05-28 21:43:47,166 | INFO     | **************************************
[2025-05-28 23:45:40] 2025-05-28 21:43:47,166 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 23:45:40] 2025-05-28 21:43:47,167 | INFO     | **************************************
[2025-05-28 23:45:40] 2025-05-28 21:43:47,167 | INFO     | 
[2025-05-28 23:45:40] 2025-05-28 21:43:47,167 | INFO     | pilot is running in a VM
[2025-05-28 23:45:40] 2025-05-28 21:43:47,167 | INFO     | architecture information:
[2025-05-28 23:45:40] 2025-05-28 21:43:47,173 | INFO     | executing command: cat /etc/os-release
[2025-05-28 23:45:40] 2025-05-28 21:43:47,427 | INFO     | cat /etc/os-release:
[2025-05-28 23:45:40] NAME="CentOS Linux"
[2025-05-28 23:45:40] VERSION="7 (Core)"
[2025-05-28 23:45:40] ID="centos"
[2025-05-28 23:45:40] ID_LIKE="rhel fedora"
[2025-05-28 23:45:40] VERSION_ID="7"
[2025-05-28 23:45:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 23:45:40] ANSI_COLOR="0;31"
[2025-05-28 23:45:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 23:45:40] HOME_URL="https://www.centos.org/"
[2025-05-28 23:45:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 23:45:40] 
[2025-05-28 23:45:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 23:45:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 23:45:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 23:45:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 23:45:40] 
[2025-05-28 23:45:40] 2025-05-28 21:43:47,427 | INFO     | **************************************
[2025-05-28 23:45:40] 2025-05-28 21:43:47,931 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-05-28 23:45:40] 2025-05-28 21:43:48,166 | INFO     | sufficient remaining disk space (495659778048 B)
[2025-05-28 23:45:40] 2025-05-28 21:43:48,167 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 23:45:40] 2025-05-28 21:43:48,167 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 23:45:40] 2025-05-28 21:43:48,167 | INFO     | update_server=False
[2025-05-28 23:45:40] 2025-05-28 21:43:48,167 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 23:45:40] 2025-05-28 21:43:48,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:45:40] 2025-05-28 21:43:48,169 | INFO     | aborting loop
[2025-05-28 23:45:40] 2025-05-28 21:43:48,268 | INFO     | all job control threads have been joined
[2025-05-28 23:45:40] 2025-05-28 21:43:48,418 | INFO     | all data control threads have been joined
[2025-05-28 23:45:40] 2025-05-28 21:43:48,454 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 23:45:40] 2025-05-28 21:43:48,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 23:45:40] 2025-05-28 21:43:48,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 23:45:40] 2025-05-28 21:43:48,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 23:45:40] 2025-05-28 21:43:49,173 | INFO     | [job] retrieve thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:49,175 | INFO     | [job] job monitor thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:49,274 | INFO     | [job] control thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:49,320 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:49,424 | INFO     | [data] control thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:49,425 | INFO     | [data] copytool_in thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:49,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:45:40] 2025-05-28 21:43:49,646 | INFO     | all payload control threads have been joined
[2025-05-28 23:45:40] 2025-05-28 21:43:49,885 | INFO     | [payload] failed_post thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:50,379 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:50,486 | INFO     | [job] validate thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:50,593 | INFO     | [job] queue monitor thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:50,649 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:50,652 | INFO     | [payload] control thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:50,717 | INFO     | [data] copytool_out thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:50,720 | INFO     | [payload] validate_post thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:51,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 23:45:40] 2025-05-28 21:43:55,198 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:43:58,955 | INFO     | job.realtimelogging is not enabled
[2025-05-28 23:45:40] 2025-05-28 21:43:59,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 23:45:40] 2025-05-28 21:44:01,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689789323072)>', '<ExcThread(monitor, started 139689331758848)>']
[2025-05-28 23:45:40] 2025-05-28 21:44:01,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 23:45:40] 2025-05-28 21:44:01,533 | INFO     | [monitor] control thread has ended
[2025-05-28 23:45:40] 2025-05-28 21:44:06,119 | INFO     | all workflow threads have been joined
[2025-05-28 23:45:40] 2025-05-28 21:44:06,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 23:45:40] 2025-05-28 21:44:06,119 | INFO     | traces error code: 0
[2025-05-28 23:45:40] 2025-05-28 21:44:06,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 23:45:40] 2025-05-28 21:44:06,439 [wrapper] ==== pilot stdout END ====
[2025-05-28 23:45:40] 2025-05-28 21:44:06,493 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 23:45:40] 2025-05-28 21:44:06,538 [wrapper] pilotpid: 14027
[2025-05-28 23:45:40] 2025-05-28 21:44:06,600 [wrapper] Pilot exit status: 0
[2025-05-28 23:45:40] 2025-05-28 21:44:07,044 [wrapper] pandaids: 6667730081
[2025-05-28 23:45:40] 2025-05-28 21:44:07,856 [wrapper] cleanup supervisor_pilot  5811 14028
[2025-05-28 23:45:40] 2025-05-28 21:44:07,915 [wrapper] Test setup, not cleaning
[2025-05-28 23:45:40] 2025-05-28 21:44:08,012 [wrapper] apfmon messages muted
[2025-05-28 23:45:40] 2025-05-28 21:44:08,121 [wrapper] ==== wrapper stdout END ====
[2025-05-28 23:45:40] 2025-05-28 21:44:08,170 [wrapper] ==== wrapper stderr END ====
[2025-05-28 23:45:40]  *** Error codes and diagnostics ***
[2025-05-28 23:45:40]     "exeErrorCode": 0,
[2025-05-28 23:45:40]     "exeErrorDiag": "",
[2025-05-28 23:45:40]     "pilotErrorCode": 0,
[2025-05-28 23:45:40]     "pilotErrorDiag": "",
[2025-05-28 23:45:40]  *** Listing of results directory ***
[2025-05-28 23:45:40] total 425720
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc    495897 May 28 00:42 pilot3.tar.gz
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc      5111 May 28 01:10 queuedata.json
[2025-05-28 23:45:40] -rwx------. 1 boinc boinc     37140 May 28 01:14 runpilot2-wrapper.sh
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc       100 May 28 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 23:45:40] -rwxr-xr-x. 1 boinc boinc      7986 May 28 18:59 run_atlas
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc       105 May 28 18:59 job.xml
[2025-05-28 23:45:40] -rw-r--r--. 2 boinc boinc 226486119 May 28 18:59 EVNT.44871834._002934.pool.root.1
[2025-05-28 23:45:40] -rw-r--r--. 2 boinc boinc     15093 May 28 18:59 start_atlas.sh
[2025-05-28 23:45:40] drwxrwx--x. 2 boinc boinc        68 May 28 18:59 shared
[2025-05-28 23:45:40] -rw-r--r--. 2 boinc boinc    508881 May 28 18:59 input.tar.gz
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc      6372 May 28 18:59 init_data.xml
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc         0 May 28 18:59 boinc_lockfile
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc      2559 May 28 18:59 pandaJob.out
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc    991935 May 28 18:59 agis_schedconf.cvmfs.json
[2025-05-28 23:45:40] drwx------. 4 boinc boinc      4096 May 28 18:59 pilot3
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc 201849027 May 28 23:40 HITS.44871837._074893.pool.root.1
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc       531 May 28 23:41 boinc_task_state.xml
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc      1016 May 28 23:41 memory_monitor_summary.json
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc   1603667 May 28 23:41 agis_ddmendpoints.agis.ALL.json
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc    406478 May 28 23:42 log.44871837._074893.job.log.tgz.1
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc        95 May 28 23:43 pilot_heartbeat.json
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc      7686 May 28 23:43 heartbeat.json
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc      4488 May 28 23:44 pilotlog.txt
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc   1480837 May 28 23:44 log.44871837._074893.job.log.1
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc       357 May 28 23:44 output.list
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc       620 May 28 23:44 runtime_log
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc   1904640 May 28 23:44 result.tar.gz
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc      8659 May 28 23:44 runtime_log.err
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc       656 May 28 23:44 L0HMDmkgIe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmacaKDmndvQsm.diag
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc      8192 May 28 23:45 boinc_mmap_file
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc        28 May 28 23:45 wrapper_checkpoint.txt
[2025-05-28 23:45:40] -rw-r--r--. 1 boinc boinc     20530 May 28 23:45 stderr.txt
[2025-05-28 23:45:40] HITS file was successfully produced:
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc 201849027 May 28 23:40 shared/HITS.pool.root.1
[2025-05-28 23:45:40]  *** Contents of shared directory: ***
[2025-05-28 23:45:40] total 420676
[2025-05-28 23:45:40] -rw-r--r--. 2 boinc boinc 226486119 May 28 18:59 ATLAS.root_0
[2025-05-28 23:45:40] -rw-r--r--. 2 boinc boinc     15093 May 28 18:59 start_atlas.sh
[2025-05-28 23:45:40] -rw-r--r--. 2 boinc boinc    508881 May 28 18:59 input.tar.gz
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc 201849027 May 28 23:40 HITS.pool.root.1
[2025-05-28 23:45:40] -rw-------. 1 boinc boinc   1904640 May 28 23:44 result.tar.gz
23:45:42 (10365): run_atlas exited; CPU time 65460.088517
23:45:42 (10365): called boinc_finish(0)

</stderr_txt>
]]>

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