Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:10:30 (16776): wrapper (7.7.26015): starting
17:10:30 (16776): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 17:10:30] Arguments: --nthreads 8
[2025-05-28 17:10:30] Threads: 8
[2025-05-28 17:10:30] Checking for CVMFS
[2025-05-28 17:10:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 17:10:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 17:10:32] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 17:10:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 17:10:33] 2.11.2.0 22062 23472 97944 146522 2 60 22361502 25165825 4632 130560 0 13340804 99.790 13942818 1761 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 17:10:33] CVMFS is ok
[2025-05-28 17:10:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 17:10:33] Checking for apptainer binary...
[2025-05-28 17:10:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 17:10:33] Running /usr/bin/apptainer --version
[2025-05-28 17:10:33] apptainer version 1.3.2-1.el7
[2025-05-28 17:10:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 17:40:57] cg-vwn481.simple-grid.lan
[2025-05-28 17:40:57] apptainer works
[2025-05-28 17:40:57] Set ATHENA_PROC_NUMBER=8
[2025-05-28 17:40:57] Set ATHENA_CORE_NUMBER=8
[2025-05-28 17:40:57] Starting ATLAS job with PandaID=6667667624
[2025-05-28 17:40:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 23:56:01]  *** The last 200 lines of the pilot log: ***
[2025-05-28 23:56:01] 2025-05-28 20:35:23,180 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:56:01] 2025-05-28 20:35:23,180 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:56:01] 2025-05-28 20:35:23,180 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:56:01] 2025-05-28 20:35:23,185 | INFO     | fitting pss+swap vs Time
[2025-05-28 23:56:01] 2025-05-28 20:35:23,186 | INFO     | sum of square deviations: 6590404498.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,188 | INFO     | sum of deviations: -9729913457.99999
[2025-05-28 23:56:01] 2025-05-28 20:35:23,188 | INFO     | mean x: 1748455947.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,188 | INFO     | mean y: 2499926.812274368
[2025-05-28 23:56:01] 2025-05-28 20:35:23,190 | INFO     | -- intersect: 2583877906.6613374
[2025-05-28 23:56:01] 2025-05-28 20:35:23,190 | INFO     | intersect: 2583877906.6613374
[2025-05-28 23:56:01] 2025-05-28 20:35:23,190 | INFO     | chi2: 2.4888028496629038
[2025-05-28 23:56:01] 2025-05-28 20:35:23,191 | INFO     | sum of square deviations: 6239923508.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,193 | INFO     | sum of deviations: 9632954629.000004
[2025-05-28 23:56:01] 2025-05-28 20:35:23,193 | INFO     | mean x: 1748455794.5
[2025-05-28 23:56:01] 2025-05-28 20:35:23,193 | INFO     | mean y: 2508228.9779411764
[2025-05-28 23:56:01] 2025-05-28 20:35:23,193 | INFO     | -- intersect: -2696690778.4517274
[2025-05-28 23:56:01] 2025-05-28 20:35:23,193 | INFO     | intersect: -2696690778.4517274
[2025-05-28 23:56:01] 2025-05-28 20:35:23,194 | INFO     | chi2: 1.6389411152540125
[2025-05-28 23:56:01] 2025-05-28 20:35:23,194 | INFO     | current chi2=1.6389411152540125 (change=34.1474108535355 %)
[2025-05-28 23:56:01] 2025-05-28 20:35:23,194 | INFO     | sum of square deviations: 5902093918.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,196 | INFO     | sum of deviations: 9368898134.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,197 | INFO     | mean x: 1748455642.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,197 | INFO     | mean y: 2508109.7902621725
[2025-05-28 23:56:01] 2025-05-28 20:35:23,197 | INFO     | -- intersect: -2772964973.03498
[2025-05-28 23:56:01] 2025-05-28 20:35:23,197 | INFO     | intersect: -2772964973.03498
[2025-05-28 23:56:01] 2025-05-28 20:35:23,197 | INFO     | chi2: 1.639209116674481
[2025-05-28 23:56:01] 2025-05-28 20:35:23,198 | INFO     | current chi2=1.639209116674481 (change=-0.016352107953984066 %)
[2025-05-28 23:56:01] 2025-05-28 20:35:23,198 | INFO     | right removable region: 266
[2025-05-28 23:56:01] 2025-05-28 20:35:23,198 | INFO     | sum of square deviations: 6239923508.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,200 | INFO     | sum of deviations: -51454207691.5
[2025-05-28 23:56:01] 2025-05-28 20:35:23,207 | INFO     | mean x: 1748456099.5
[2025-05-28 23:56:01] 2025-05-28 20:35:23,207 | INFO     | mean y: 2517926.7536764704
[2025-05-28 23:56:01] 2025-05-28 20:35:23,207 | INFO     | -- intersect: 14420230446.434614
[2025-05-28 23:56:01] 2025-05-28 20:35:23,207 | INFO     | intersect: 14420230446.434614
[2025-05-28 23:56:01] 2025-05-28 20:35:23,208 | INFO     | chi2: 1.0479094991012967
[2025-05-28 23:56:01] 2025-05-28 20:35:23,208 | INFO     | current chi2=1.0479094991012967 (change=57.89503779926839 %)
[2025-05-28 23:56:01] 2025-05-28 20:35:23,208 | INFO     | sum of square deviations: 5902093918.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,210 | INFO     | sum of deviations: -45791773410.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,210 | INFO     | mean x: 1748456252.0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,211 | INFO     | mean y: 2515352.5393258426
[2025-05-28 23:56:01] 2025-05-28 20:35:23,211 | INFO     | -- intersect: 13568025088.787792
[2025-05-28 23:56:01] 2025-05-28 20:35:23,211 | INFO     | intersect: 13568025088.787792
[2025-05-28 23:56:01] 2025-05-28 20:35:23,211 | INFO     | chi2: 1.0317966843028246
[2025-05-28 23:56:01] 2025-05-28 20:35:23,211 | INFO     | current chi2=1.0317966843028246 (change=1.5376151101112023 %)
[2025-05-28 23:56:01] 2025-05-28 20:35:23,211 | INFO     | left removable region: 20
[2025-05-28 23:56:01] 2025-05-28 20:35:23,212 | INFO     | sum of square deviations: 4616114457.5
[2025-05-28 23:56:01] 2025-05-28 20:35:23,214 | INFO     | sum of deviations: -8316218175.499997
[2025-05-28 23:56:01] 2025-05-28 20:35:23,214 | INFO     | mean x: 1748456221.5
[2025-05-28 23:56:01] 2025-05-28 20:35:23,214 | INFO     | mean y: 2515266.3780487804
[2025-05-28 23:56:01] 2025-05-28 20:35:23,214 | INFO     | -- intersect: 3152468228.37181
[2025-05-28 23:56:01] 2025-05-28 20:35:23,214 | INFO     | intersect: 3152468228.37181
[2025-05-28 23:56:01] 2025-05-28 20:35:23,214 | INFO     | chi2: 0.09903116818176513
[2025-05-28 23:56:01] 2025-05-28 20:35:23,215 | INFO     | -- intersect: 3152468228.37181
[2025-05-28 23:56:01] 2025-05-28 20:35:23,215 | INFO     | current memory leak: -1.80 B/s (using 246 data points, chi2=0.10)
[2025-05-28 23:56:01] 2025-05-28 20:35:23,215 | INFO     | ..............................
[2025-05-28 23:56:01] 2025-05-28 20:35:23,216 | INFO     | . Timing measurements:
[2025-05-28 23:56:01] 2025-05-28 20:35:23,216 | INFO     | . get job = 0 s
[2025-05-28 23:56:01] 2025-05-28 20:35:23,216 | INFO     | . initial setup = 9 s
[2025-05-28 23:56:01] 2025-05-28 20:35:23,216 | INFO     | . payload setup = 160 s
[2025-05-28 23:56:01] 2025-05-28 20:35:23,216 | INFO     | . stage-in = 0 s
[2025-05-28 23:56:01] 2025-05-28 20:35:23,216 | INFO     | . payload execution = 17029 s
[2025-05-28 23:56:01] 2025-05-28 20:35:23,216 | INFO     | . stage-out = 3 s
[2025-05-28 23:56:01] 2025-05-28 20:35:23,216 | INFO     | . log creation = 1 s
[2025-05-28 23:56:01] 2025-05-28 20:35:23,216 | INFO     | ..............................
[2025-05-28 23:56:01] 2025-05-28 20:35:23,743 | INFO     | 
[2025-05-28 23:56:01] 2025-05-28 20:35:23,743 | INFO     | job summary report
[2025-05-28 23:56:01] 2025-05-28 20:35:23,743 | INFO     | --------------------------------------------------
[2025-05-28 23:56:01] 2025-05-28 20:35:23,743 | INFO     | PanDA job id: 6667667624
[2025-05-28 23:56:01] 2025-05-28 20:35:23,743 | INFO     | task id: 44871837
[2025-05-28 23:56:01] 2025-05-28 20:35:23,743 | INFO     | errors: (none)
[2025-05-28 23:56:01] 2025-05-28 20:35:23,743 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 23:56:01] 2025-05-28 20:35:23,743 | INFO     | pilot state: finished 
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | transexitcode: 0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | exeerrorcode: 0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | exeerrordiag: 
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | exitcode: 0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | exitmsg: OK
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | cpuconsumptiontime: 64890 s
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | nevents: 400
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | neventsw: 0
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | pid: 13957
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | pgrp: 13957
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | corecount: 8
[2025-05-28 23:56:01] 2025-05-28 20:35:23,744 | INFO     | event service: False
[2025-05-28 23:56:01] 2025-05-28 20:35:23,745 | INFO     | sizes: {0: 2405008, 1: 2405263, 12: 2405263, 23: 2405291, 33: 2405319, 44: 2405375, 55: 2405531, 65: 2405559, 76: 2405587, 81: 2405849, 87: 2405877, 17194: 2437113
[2025-05-28 23:56:01] 2025-05-28 20:35:23,745 | INFO     | --------------------------------------------------
[2025-05-28 23:56:01] 2025-05-28 20:35:23,745 | INFO     | 
[2025-05-28 23:56:01] 2025-05-28 20:35:23,745 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-05-28 23:56:01] 2025-05-28 20:35:24,176 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 23:56:01] 2025-05-28 20:35:24,178 | INFO     | job 6667667624 has completed (purged errors)
[2025-05-28 23:56:01] 2025-05-28 20:35:24,179 | INFO     | overall cleanup function is called
[2025-05-28 23:56:01] 2025-05-28 20:35:25,191 | INFO     | --- collectZombieJob: --- 10, [13957]
[2025-05-28 23:56:01] 2025-05-28 20:35:25,191 | INFO     | zombie collector waiting for pid 13957
[2025-05-28 23:56:01] 2025-05-28 20:35:25,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 23:56:01] 2025-05-28 20:35:25,191 | INFO     | collected zombie processes
[2025-05-28 23:56:01] 2025-05-28 20:35:25,191 | INFO     | will attempt to kill all subprocesses of pid=13957
[2025-05-28 23:56:01] 2025-05-28 20:35:25,291 | INFO     | process IDs to be killed: [13957] (in reverse order)
[2025-05-28 23:56:01] 2025-05-28 20:35:25,957 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 23:56:01] 2025-05-28 20:35:25,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 23:56:01] 2025-05-28 20:35:25,961 | INFO     | did not find any defunct processes belonging to 13957
[2025-05-28 23:56:01] 2025-05-28 20:35:25,963 | INFO     | did not find any defunct processes belonging to 13957
[2025-05-28 23:56:01] 2025-05-28 20:35:25,964 | INFO     | ready for new job
[2025-05-28 23:56:01] 2025-05-28 20:35:25,964 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 23:56:01] 2025-05-28 20:35:25,966 | INFO     | **************************************
[2025-05-28 23:56:01] 2025-05-28 20:35:25,966 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 23:56:01] 2025-05-28 20:35:25,966 | INFO     | **************************************
[2025-05-28 23:56:01] 2025-05-28 20:35:25,966 | INFO     | 
[2025-05-28 23:56:01] 2025-05-28 20:35:25,967 | INFO     | pilot is running in a VM
[2025-05-28 23:56:01] 2025-05-28 20:35:25,967 | INFO     | architecture information:
[2025-05-28 23:56:01] 2025-05-28 20:35:25,969 | INFO     | executing command: cat /etc/os-release
[2025-05-28 23:56:01] 2025-05-28 20:35:26,273 | INFO     | cat /etc/os-release:
[2025-05-28 23:56:01] NAME="CentOS Linux"
[2025-05-28 23:56:01] VERSION="7 (Core)"
[2025-05-28 23:56:01] ID="centos"
[2025-05-28 23:56:01] ID_LIKE="rhel fedora"
[2025-05-28 23:56:01] VERSION_ID="7"
[2025-05-28 23:56:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 23:56:01] ANSI_COLOR="0;31"
[2025-05-28 23:56:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 23:56:01] HOME_URL="https://www.centos.org/"
[2025-05-28 23:56:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 23:56:01] 
[2025-05-28 23:56:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 23:56:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 23:56:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 23:56:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 23:56:01] 
[2025-05-28 23:56:01] 2025-05-28 20:35:26,274 | INFO     | **************************************
[2025-05-28 23:56:01] 2025-05-28 20:35:26,506 | INFO     | PID=5349 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-28 23:56:01] 2025-05-28 20:35:26,506 | INFO     | .. there are 9 such processes running
[2025-05-28 23:56:01] 2025-05-28 20:35:26,777 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-05-28 23:56:01] 2025-05-28 20:35:27,057 | INFO     | sufficient remaining disk space (496094937088 B)
[2025-05-28 23:56:01] 2025-05-28 20:35:27,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 23:56:01] 2025-05-28 20:35:27,058 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 23:56:01] 2025-05-28 20:35:27,058 | INFO     | update_server=False
[2025-05-28 23:56:01] 2025-05-28 20:35:27,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 23:56:01] 2025-05-28 20:35:27,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 23:56:01] 2025-05-28 20:35:27,060 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 23:56:01] 2025-05-28 20:35:27,060 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 23:56:01] 2025-05-28 20:35:27,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 23:56:01] 2025-05-28 20:35:27,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 23:56:01] 2025-05-28 20:35:27,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:56:01] 2025-05-28 20:35:27,246 | INFO     | aborting loop
[2025-05-28 23:56:01] 2025-05-28 20:35:27,626 | INFO     | all data control threads have been joined
[2025-05-28 23:56:01] 2025-05-28 20:35:28,064 | INFO     | [job] retrieve thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:28,123 | INFO     | [job] validate thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:28,141 | INFO     | all job control threads have been joined
[2025-05-28 23:56:01] 2025-05-28 20:35:28,252 | INFO     | [job] job monitor thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:28,282 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:28,413 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:28,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:56:01] 2025-05-28 20:35:28,430 | INFO     | all payload control threads have been joined
[2025-05-28 23:56:01] 2025-05-28 20:35:28,470 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:28,632 | INFO     | [data] control thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:28,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:29,066 | INFO     | [data] copytool_out thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:29,076 | INFO     | [payload] failed_post thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:29,078 | INFO     | [payload] validate_post thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:29,147 | INFO     | [job] control thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:29,271 | INFO     | [data] copytool_in thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:29,423 | INFO     | [job] queue monitor thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:29,436 | INFO     | [payload] control thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:30,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 23:56:01] 2025-05-28 20:35:34,093 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 23:56:01] 2025-05-28 20:35:34,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245296904000)>', '<ExcThread(monitor, started 140244565354240)>']
[2025-05-28 23:56:01] 2025-05-28 20:35:35,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 23:56:01] 2025-05-28 20:35:35,112 | INFO     | [monitor] control thread has ended
[2025-05-28 23:56:01] 2025-05-28 20:35:39,445 | INFO     | all workflow threads have been joined
[2025-05-28 23:56:01] 2025-05-28 20:35:39,445 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 23:56:01] 2025-05-28 20:35:39,445 | INFO     | traces error code: 0
[2025-05-28 23:56:01] 2025-05-28 20:35:39,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 23:56:01] 2025-05-28 20:35:39,766 [wrapper] ==== pilot stdout END ====
[2025-05-28 23:56:01] 2025-05-28 20:35:39,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 23:56:01] 2025-05-28 20:35:39,899 [wrapper] pilotpid: 5349
[2025-05-28 23:56:01] 2025-05-28 20:35:39,940 [wrapper] Pilot exit status: 0
[2025-05-28 23:56:01] 2025-05-28 20:35:40,294 [wrapper] pandaids: 6667667624
[2025-05-28 23:56:01] 2025-05-28 20:35:41,240 [wrapper] cleanup supervisor_pilot 31701 5350
[2025-05-28 23:56:01] 2025-05-28 20:35:41,346 [wrapper] Test setup, not cleaning
[2025-05-28 23:56:01] 2025-05-28 20:35:41,490 [wrapper] apfmon messages muted
[2025-05-28 23:56:01] 2025-05-28 20:35:41,550 [wrapper] ==== wrapper stdout END ====
[2025-05-28 23:56:01] 2025-05-28 20:35:41,657 [wrapper] ==== wrapper stderr END ====
[2025-05-28 23:56:01]  *** Error codes and diagnostics ***
[2025-05-28 23:56:01]     "exeErrorCode": 0,
[2025-05-28 23:56:01]     "exeErrorDiag": "",
[2025-05-28 23:56:01]     "pilotErrorCode": 0,
[2025-05-28 23:56:01]     "pilotErrorDiag": "",
[2025-05-28 23:56:01]  *** Listing of results directory ***
[2025-05-28 23:56:01] total 416940
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc      5111 May 28 00:40 queuedata.json
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc    495897 May 28 00:42 pilot3.tar.gz
[2025-05-28 23:56:01] -rwx------. 1 boinc boinc     37140 May 28 00:44 runpilot2-wrapper.sh
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc       100 May 28 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 23:56:01] -rwxr-xr-x. 1 boinc boinc      7986 May 28 17:10 run_atlas
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc       105 May 28 17:10 job.xml
[2025-05-28 23:56:01] -rw-r--r--. 2 boinc boinc 222109358 May 28 17:10 EVNT.44871834._002922.pool.root.1
[2025-05-28 23:56:01] -rw-r--r--. 2 boinc boinc     15093 May 28 17:10 start_atlas.sh
[2025-05-28 23:56:01] drwxrwx--x. 2 boinc boinc        68 May 28 17:10 shared
[2025-05-28 23:56:01] -rw-r--r--. 2 boinc boinc    508874 May 28 17:10 input.tar.gz
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc      6373 May 28 17:10 init_data.xml
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc         0 May 28 17:10 boinc_lockfile
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc      2559 May 28 17:40 pandaJob.out
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc    991935 May 28 17:44 agis_schedconf.cvmfs.json
[2025-05-28 23:56:01] drwx------. 4 boinc boinc      4096 May 28 17:44 pilot3
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc 197194326 May 28 22:32 HITS.44871837._074536.pool.root.1
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc       531 May 28 22:32 boinc_task_state.xml
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc      1021 May 28 22:33 memory_monitor_summary.json
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc   1603667 May 28 22:33 agis_ddmendpoints.agis.ALL.json
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc    418891 May 28 22:33 log.44871837._074536.job.log.tgz.1
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc        95 May 28 22:34 pilot_heartbeat.json
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc      7695 May 28 22:35 heartbeat.json
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc      4931 May 28 22:35 pilotlog.txt
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc   1489881 May 28 22:35 log.44871837._074536.job.log.1
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc       357 May 28 22:35 output.list
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc       620 May 28 22:35 runtime_log
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc   1925120 May 28 22:35 result.tar.gz
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc      8673 May 28 22:35 runtime_log.err
[2025-05-28 23:56:01] -rw-------. 1 boinc boinc       657 May 28 22:35 aR7LDmoCIe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm5WSKDmenVXcn.diag
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc      8192 May 28 23:56 boinc_mmap_file
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc        28 May 28 23:56 wrapper_checkpoint.txt
[2025-05-28 23:56:01] -rw-r--r--. 1 boinc boinc     20562 May 28 23:56 stderr.txt
[2025-05-28 23:56:02] HITS file was successfully produced:
[2025-05-28 23:56:02] -rw-------. 1 boinc boinc 197194326 May 28 22:32 shared/HITS.pool.root.1
[2025-05-28 23:56:02]  *** Contents of shared directory: ***
[2025-05-28 23:56:02] total 411876
[2025-05-28 23:56:02] -rw-r--r--. 2 boinc boinc 222109358 May 28 17:10 ATLAS.root_0
[2025-05-28 23:56:02] -rw-r--r--. 2 boinc boinc     15093 May 28 17:10 start_atlas.sh
[2025-05-28 23:56:02] -rw-r--r--. 2 boinc boinc    508874 May 28 17:10 input.tar.gz
[2025-05-28 23:56:02] -rw-------. 1 boinc boinc 197194326 May 28 22:32 HITS.pool.root.1
[2025-05-28 23:56:02] -rw-------. 1 boinc boinc   1925120 May 28 22:35 result.tar.gz
23:56:03 (16776): run_atlas exited; CPU time 65107.395978
23:56:03 (16776): called boinc_finish(0)

</stderr_txt>
]]>

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