Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:09:42 (3786602): wrapper (7.7.26015): starting
21:09:42 (3786602): wrapper: running run_atlas (--nthreads 12)
[2025-05-27 21:09:42] Arguments: --nthreads 12
[2025-05-27 21:09:42] Threads: 12
[2025-05-27 21:09:42] Checking for CVMFS
[2025-05-27 21:09:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 21:09:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 21:09:43] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 21:09:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 21:09:43] 2.11.5.0 3123740 22580 322232 146505 1 29 33931922 45568001 21486 130560 0 174921593 99.754 129695860 29742 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-27 21:09:43] CVMFS is ok
[2025-05-27 21:09:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 21:09:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 21:09:43] Further information can be found at the LHC@home message board.
[2025-05-27 21:09:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 21:09:43] Checking for apptainer binary...
[2025-05-27 21:09:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 21:09:43] Running /usr/bin/apptainer --version
[2025-05-27 21:09:43] apptainer version 1.4.0-1.el9
[2025-05-27 21:09:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 21:09:43] wns0161.triumf.lcg
[2025-05-27 21:09:43] apptainer works
[2025-05-27 21:09:43] Set ATHENA_PROC_NUMBER=12
[2025-05-27 21:09:43] Set ATHENA_CORE_NUMBER=12
[2025-05-27 21:09:43] Starting ATLAS job with PandaID=6667883256
[2025-05-27 21:09:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 21:13:00]  *** The last 200 lines of the pilot log: ***
[2025-05-27 21:13:00] 2025-05-28 04:12:47,176 | INFO     | extracted standard info from prmon json
[2025-05-27 21:13:00] 2025-05-28 04:12:47,176 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 21:13:00] 2025-05-28 04:12:47,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | WARNING  | found no stored workdir sizes
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | WARNING  | wrong length of table data, x=[1748405426.0], y=[833.0] (must be same and length>=4)
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | ..............................
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . Timing measurements:
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . get job = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . initial setup = 3 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . payload setup = 7 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . stage-in = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . payload execution = 21 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . stage-out = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | . log creation = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | ..............................
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667883256/pilotlog.txt
[2025-05-27 21:13:00] 2025-05-28 04:12:47,191 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-27 21:13:00] - Log from pilotlog.txt -
[2025-05-27 21:13:00] 2025-05-28 04:12:47,176 | INFO     | extracted standard info from prmon json
[2025-05-27 21:13:00] 2025-05-28 04:12:47,176 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 21:13:00] 2025-05-28 04:12:47,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | WARNING  | found no stored workdir sizes
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | WARNING  | wrong length of table data, x=[1748405426.0], y=[833.0] (must be same and length>=4)
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | ..............................
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . Timing measurements:
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . get job = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . initial setup = 3 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . payload setup = 7 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . stage-in = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . payload execution = 21 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . stage-out = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | . log creation = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | ..............................
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667883256/pilotlog.txt
[2025-05-27 21:13:00] 2025-05-28 04:12:47,192 | WARNING  | 
[2025-05-27 21:13:00] [begin log extracts]
[2025-05-27 21:13:00] - Log from pilotlog.txt -
[2025-05-27 21:13:00] 2025-05-28 04:12:47,176 | INFO     | extracted standard info from prmon json
[2025-05-27 21:13:00] 2025-05-28 04:12:47,176 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 21:13:00] 2025-05-28 04:12:47,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | WARNING  | found no stored workdir sizes
[2025-05-27 21:13:00] 2025-05-28 04:12:47,177 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | WARNING  | wrong length of table data, x=[1748405426.0], y=[833.0] (must be same and length>=4)
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | ..............................
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . Timing measurements:
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . get job = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . initial setup = 3 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . payload setup = 7 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . stage-in = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . payload execution = 21 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,178 | INFO     | . stage-out = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | . log creation = 0 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | ..............................
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 21:13:00] 2025-05-28 04:12:47,179 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667883256/pilotlog.txt
[2025-05-27 21:13:00] [end log extracts]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,192 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-27 21:13:00] 2025-05-28 04:12:47,193 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-27 21:13:00] 2025-05-28 04:12:47,266 | INFO     | 
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | job summary report
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | --------------------------------------------------
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | PanDA job id: 6667883256
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | task id: 44871837
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-27 21:10:36,402 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | pilot state: failed 
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | transexitcode: 65
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | exeerrorcode: 65
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | exitcode: 65
[2025-05-27 21:13:00] 2025-05-28 04:12:47,267 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | cpuconsumptiontime: 19 s
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | nevents: 0
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | neventsw: 0
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | pid: 3796685
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | pgrp: 3796685
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | corecount: 12
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | event service: False
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | sizes: {0: 2405231, 1: 2405231, 5: 2405465, 11: 2405521, 32: 2428850, 33: 2433085, 35: 2433269, 155: 2433411}
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | --------------------------------------------------
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | 
[2025-05-27 21:13:00] 2025-05-28 04:12:47,268 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | job 6667883256 has completed (purged errors)
[2025-05-27 21:13:00] 2025-05-28 04:12:47,294 | INFO     | overall cleanup function is called
[2025-05-27 21:13:00] 2025-05-28 04:12:48,300 | INFO     | --- collectZombieJob: --- 10, [3796685]
[2025-05-27 21:13:00] 2025-05-28 04:12:48,300 | INFO     | zombie collector waiting for pid 3796685
[2025-05-27 21:13:00] 2025-05-28 04:12:48,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 21:13:00] 2025-05-28 04:12:48,301 | INFO     | collected zombie processes
[2025-05-27 21:13:00] 2025-05-28 04:12:48,301 | INFO     | will attempt to kill all subprocesses of pid=3796685
[2025-05-27 21:13:00] 2025-05-28 04:12:48,720 | INFO     | process IDs to be killed: [3796685] (in reverse order)
[2025-05-27 21:13:00] 2025-05-28 04:12:48,839 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 21:13:00] 2025-05-28 04:12:48,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 21:13:00] 2025-05-28 04:12:48,852 | INFO     | did not find any defunct processes belonging to 3796685
[2025-05-27 21:13:00] 2025-05-28 04:12:48,861 | INFO     | did not find any defunct processes belonging to 3796685
[2025-05-27 21:13:00] 2025-05-28 04:12:48,862 | INFO     | ready for new job
[2025-05-27 21:13:00] 2025-05-28 04:12:48,862 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 21:13:00] 2025-05-28 04:12:48,863 | INFO     | **************************************
[2025-05-27 21:13:00] 2025-05-28 04:12:48,863 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 21:13:00] 2025-05-28 04:12:48,864 | INFO     | **************************************
[2025-05-27 21:13:00] 2025-05-28 04:12:48,864 | INFO     | 
[2025-05-27 21:13:00] 2025-05-28 04:12:48,866 | INFO     | architecture information:
[2025-05-27 21:13:00] 2025-05-28 04:12:48,867 | INFO     | executing command: cat /etc/os-release
[2025-05-27 21:13:00] 2025-05-28 04:12:48,883 | INFO     | cat /etc/os-release:
[2025-05-27 21:13:00] NAME="CentOS Linux"
[2025-05-27 21:13:00] VERSION="7 (Core)"
[2025-05-27 21:13:00] ID="centos"
[2025-05-27 21:13:00] ID_LIKE="rhel fedora"
[2025-05-27 21:13:00] VERSION_ID="7"
[2025-05-27 21:13:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 21:13:00] ANSI_COLOR="0;31"
[2025-05-27 21:13:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 21:13:00] HOME_URL="https://www.centos.org/"
[2025-05-27 21:13:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 21:13:00] 
[2025-05-27 21:13:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 21:13:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 21:13:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 21:13:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 21:13:00] 
[2025-05-27 21:13:00] 2025-05-28 04:12:48,883 | INFO     | **************************************
[2025-05-27 21:13:00] 2025-05-28 04:12:49,387 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-27 21:13:00] 2025-05-28 04:12:49,407 | INFO     | sufficient remaining disk space (1866171678720 B)
[2025-05-27 21:13:00] 2025-05-28 04:12:49,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 21:13:00] 2025-05-28 04:12:49,407 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 21:13:00] 2025-05-28 04:12:49,407 | INFO     | update_server=False
[2025-05-27 21:13:00] 2025-05-28 04:12:49,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 21:13:00] 2025-05-28 04:12:49,527 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 21:13:00] 2025-05-28 04:12:49,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 21:13:00] 2025-05-28 04:12:49,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 21:13:00] 2025-05-28 04:12:49,538 | INFO     | all data control threads have been joined
[2025-05-27 21:13:00] 2025-05-28 04:12:50,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 21:13:00] 2025-05-28 04:12:50,356 | INFO     | aborting loop
[2025-05-27 21:13:00] 2025-05-28 04:12:50,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 21:13:00] 2025-05-28 04:12:50,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 21:13:00] 2025-05-28 04:12:50,413 | INFO     | [job] retrieve thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:50,422 | INFO     | [payload] failed_post thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:50,515 | INFO     | all job control threads have been joined
[2025-05-27 21:13:00] 2025-05-28 04:12:50,544 | INFO     | [data] control thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:50,828 | INFO     | [data] copytool_in thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:50,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:50,910 | INFO     | all payload control threads have been joined
[2025-05-27 21:13:00] 2025-05-28 04:12:51,077 | INFO     | [payload] validate_post thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:51,368 | INFO     | [job] job monitor thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:51,385 | INFO     | [job] validate thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:51,480 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:51,520 | INFO     | [job] control thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:51,653 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:51,789 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:51,916 | INFO     | [payload] control thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:52,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 21:13:00] 2025-05-28 04:12:52,374 | INFO     | [data] copytool_out thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:53,296 | INFO     | [job] queue monitor thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:54,404 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 21:13:00] 2025-05-28 04:12:54,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139739600705344)>', '<ExcThread(monitor, started 139739210430208)>']
[2025-05-27 21:13:00] 2025-05-28 04:12:55,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 21:13:00] 2025-05-28 04:12:55,561 | INFO     | [monitor] control thread has ended
[2025-05-27 21:13:00] 2025-05-28 04:12:59,873 | INFO     | all workflow threads have been joined
[2025-05-27 21:13:00] 2025-05-28 04:12:59,873 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 21:13:00] 2025-05-28 04:12:59,874 | INFO     | traces error code: 0
[2025-05-27 21:13:00] 2025-05-28 04:12:59,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 21:13:00] 2025-05-28 04:12:59,996 [wrapper] ==== pilot stdout END ====
[2025-05-27 21:13:00] 2025-05-28 04:12:59,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 21:13:00] 2025-05-28 04:13:00,000 [wrapper] pilotpid: 3790160
[2025-05-27 21:13:00] 2025-05-28 04:13:00,003 [wrapper] Pilot exit status: 0
[2025-05-27 21:13:00] 2025-05-28 04:13:00,012 [wrapper] pandaids: 6667883256
[2025-05-27 21:13:00] 2025-05-28 04:13:00,079 [wrapper] cleanup supervisor_pilot 3790166 3790161
[2025-05-27 21:13:00] 2025-05-28 04:13:00,083 [wrapper] Test setup, not cleaning
[2025-05-27 21:13:00] 2025-05-28 04:13:00,086 [wrapper] apfmon messages muted
[2025-05-27 21:13:00] 2025-05-28 04:13:00,089 [wrapper] ==== wrapper stdout END ====
[2025-05-27 21:13:00] 2025-05-28 04:13:00,091 [wrapper] ==== wrapper stderr END ====
[2025-05-27 21:13:00]  *** Error codes and diagnostics ***
[2025-05-27 21:13:00]     "exeErrorCode": 65,
[2025-05-27 21:13:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 21:13:00]     "pilotErrorCode": 1305,
[2025-05-27 21:13:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 21:13:00]  *** Listing of results directory ***
[2025-05-27 21:13:00] total 222356
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc    495897 May 27 17:38 pilot3.tar.gz
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc      5111 May 27 18:20 queuedata.json
[2025-05-27 21:13:00] -rwx------. 1 boinc boinc     37140 May 27 18:23 runpilot2-wrapper.sh
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc       100 May 27 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 21:13:00] -rwxr-xr-x. 1 boinc boinc      7986 May 27 21:09 run_atlas
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc       105 May 27 21:09 job.xml
[2025-05-27 21:13:00] -rw-r--r--. 2 boinc boinc 223665807 May 27 21:09 EVNT.44871834._002995.pool.root.1
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc      6598 May 27 21:09 init_data.xml
[2025-05-27 21:13:00] -rw-r--r--. 2 boinc boinc     15093 May 27 21:09 start_atlas.sh
[2025-05-27 21:13:00] drwxrwx--x. 2 boinc boinc      4096 May 27 21:09 shared
[2025-05-27 21:13:00] -rw-r--r--. 2 boinc boinc    508884 May 27 21:09 input.tar.gz
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc         0 May 27 21:09 boinc_lockfile
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc      2559 May 27 21:09 pandaJob.out
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc    991169 May 27 21:09 agis_schedconf.cvmfs.json
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc   1603667 May 27 21:09 agis_ddmendpoints.agis.ALL.json
[2025-05-27 21:13:00] drwx------. 4 boinc boinc      4096 May 27 21:09 pilot3
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc       952 May 27 21:10 memory_monitor_summary.json
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc     20328 May 27 21:10 log.44871837._076561.job.log.tgz.1
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc        95 May 27 21:11 pilot_heartbeat.json
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc      8329 May 27 21:12 heartbeat.json
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc       523 May 27 21:12 boinc_task_state.xml
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc      4352 May 27 21:12 pilotlog.txt
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc      8192 May 27 21:13 boinc_mmap_file
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc        22 May 27 21:13 wrapper_checkpoint.txt
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc     74143 May 27 21:13 log.44871837._076561.job.log.1
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc       188 May 27 21:13 output.list
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc       620 May 27 21:13 runtime_log
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc    112640 May 27 21:13 result.tar.gz
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc       647 May 27 21:13 vNrNDmYhKe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmiSKDmtn87Ym.diag
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc      8484 May 27 21:13 runtime_log.err
[2025-05-27 21:13:00] -rw-r--r--. 1 boinc boinc     21447 May 27 21:13 stderr.txt
[2025-05-27 21:13:00] No HITS result produced
[2025-05-27 21:13:00]  *** Contents of shared directory: ***
[2025-05-27 21:13:00] total 219056
[2025-05-27 21:13:00] -rw-r--r--. 2 boinc boinc 223665807 May 27 21:09 ATLAS.root_0
[2025-05-27 21:13:00] -rw-r--r--. 2 boinc boinc     15093 May 27 21:09 start_atlas.sh
[2025-05-27 21:13:00] -rw-r--r--. 2 boinc boinc    508884 May 27 21:09 input.tar.gz
[2025-05-27 21:13:00] -rw-------. 1 boinc boinc    112640 May 27 21:13 result.tar.gz
21:13:02 (3786602): run_atlas exited; CPU time 25.551570
21:13:02 (3786602): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN