Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:03:28 (4150508): wrapper (7.7.26015): starting
21:03:28 (4150508): wrapper: running run_atlas (--nthreads 12)
[2025-05-27 21:03:28] Arguments: --nthreads 12
[2025-05-27 21:03:28] Threads: 12
[2025-05-27 21:03:28] Checking for CVMFS
[2025-05-27 21:03:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 21:03:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 21:03:28] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 21:03:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 21:03:29] 2.11.5.0 4147171 13314 235912 146504 0 418 30320451 45568001 11975 130560 0 147410485 99.809 79989324 25348 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-27 21:03:29] CVMFS is ok
[2025-05-27 21:03:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 21:03:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 21:03:29] Further information can be found at the LHC@home message board.
[2025-05-27 21:03:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 21:03:29] Checking for apptainer binary...
[2025-05-27 21:03:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 21:03:29] Running /usr/bin/apptainer --version
[2025-05-27 21:03:29] apptainer version 1.4.0-1.el9
[2025-05-27 21:03:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 21:03:29] wns0047.triumf.lcg
[2025-05-27 21:03:29] apptainer works
[2025-05-27 21:03:29] Set ATHENA_PROC_NUMBER=12
[2025-05-27 21:03:29] Set ATHENA_CORE_NUMBER=12
[2025-05-27 21:03:29] Starting ATLAS job with PandaID=6667883018
[2025-05-27 21:03:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 21:06:42]  *** The last 200 lines of the pilot log: ***
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | INFO     | extracted standard info from prmon json
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | WARNING  | found no stored workdir sizes
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | WARNING  | wrong length of table data, x=[1748405048.0], y=[1050.0] (must be same and length>=4)
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | ..............................
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . Timing measurements:
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . get job = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . initial setup = 3 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . payload setup = 5 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . stage-in = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . payload execution = 19 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . stage-out = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . log creation = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | ..............................
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667883018/pilotlog.txt
[2025-05-27 21:06:42] 2025-05-28 04:06:29,926 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-27 21:06:42] - Log from pilotlog.txt -
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | INFO     | extracted standard info from prmon json
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | WARNING  | found no stored workdir sizes
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | WARNING  | wrong length of table data, x=[1748405048.0], y=[1050.0] (must be same and length>=4)
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | ..............................
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . Timing measurements:
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . get job = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . initial setup = 3 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . payload setup = 5 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . stage-in = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . payload execution = 19 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . stage-out = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . log creation = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | ..............................
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667883018/pilotlog.txt
[2025-05-27 21:06:42] 2025-05-28 04:06:29,926 | WARNING  | 
[2025-05-27 21:06:42] [begin log extracts]
[2025-05-27 21:06:42] - Log from pilotlog.txt -
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | INFO     | extracted standard info from prmon json
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 21:06:42] 2025-05-28 04:06:29,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | WARNING  | found no stored workdir sizes
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 21:06:42] 2025-05-28 04:06:29,793 | WARNING  | wrong length of table data, x=[1748405048.0], y=[1050.0] (must be same and length>=4)
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | ..............................
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . Timing measurements:
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . get job = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . initial setup = 3 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . payload setup = 5 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . stage-in = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . payload execution = 19 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . stage-out = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | . log creation = 0 s
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | ..............................
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 21:06:42] 2025-05-28 04:06:29,794 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667883018/pilotlog.txt
[2025-05-27 21:06:42] [end log extracts]
[2025-05-27 21:06:42] 2025-05-28 04:06:29,927 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-27 21:06:42] 2025-05-28 04:06:29,927 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-27 21:06:42] 2025-05-28 04:06:30,173 | INFO     | 
[2025-05-27 21:06:42] 2025-05-28 04:06:30,173 | INFO     | job summary report
[2025-05-27 21:06:42] 2025-05-28 04:06:30,173 | INFO     | --------------------------------------------------
[2025-05-27 21:06:42] 2025-05-28 04:06:30,173 | INFO     | PanDA job id: 6667883018
[2025-05-27 21:06:42] 2025-05-28 04:06:30,173 | INFO     | task id: 44871837
[2025-05-27 21:06:42] 2025-05-28 04:06:30,173 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-27 21:04:18,908 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-27 21:06:42] 2025-05-28 04:06:30,173 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 21:06:42] 2025-05-28 04:06:30,173 | INFO     | pilot state: failed 
[2025-05-27 21:06:42] 2025-05-28 04:06:30,173 | INFO     | transexitcode: 65
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | exeerrorcode: 65
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | exitcode: 65
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | cpuconsumptiontime: 15 s
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | nevents: 0
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | neventsw: 0
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | pid: 4160939
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | pgrp: 4160939
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | corecount: 12
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | event service: False
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | sizes: {0: 2405060, 1: 2405259, 5: 2405465, 11: 2405521, 28: 2428902, 29: 2428878, 31: 2433297, 152: 2433411}
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | --------------------------------------------------
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | 
[2025-05-27 21:06:42] 2025-05-28 04:06:30,174 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | job 6667883018 has completed (purged errors)
[2025-05-27 21:06:42] 2025-05-28 04:06:30,189 | INFO     | overall cleanup function is called
[2025-05-27 21:06:42] 2025-05-28 04:06:31,196 | INFO     | --- collectZombieJob: --- 10, [4160939]
[2025-05-27 21:06:42] 2025-05-28 04:06:31,196 | INFO     | zombie collector waiting for pid 4160939
[2025-05-27 21:06:42] 2025-05-28 04:06:31,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 21:06:42] 2025-05-28 04:06:31,197 | INFO     | collected zombie processes
[2025-05-27 21:06:42] 2025-05-28 04:06:31,197 | INFO     | will attempt to kill all subprocesses of pid=4160939
[2025-05-27 21:06:42] 2025-05-28 04:06:31,545 | INFO     | process IDs to be killed: [4160939] (in reverse order)
[2025-05-27 21:06:42] 2025-05-28 04:06:31,679 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 21:06:42] 2025-05-28 04:06:31,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 21:06:42] 2025-05-28 04:06:31,706 | INFO     | did not find any defunct processes belonging to 4160939
[2025-05-27 21:06:42] 2025-05-28 04:06:31,751 | INFO     | did not find any defunct processes belonging to 4160939
[2025-05-27 21:06:42] 2025-05-28 04:06:31,751 | INFO     | ready for new job
[2025-05-27 21:06:42] 2025-05-28 04:06:31,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 21:06:42] 2025-05-28 04:06:31,766 | INFO     | **************************************
[2025-05-27 21:06:42] 2025-05-28 04:06:31,766 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 21:06:42] 2025-05-28 04:06:31,766 | INFO     | **************************************
[2025-05-27 21:06:42] 2025-05-28 04:06:31,766 | INFO     | 
[2025-05-27 21:06:42] 2025-05-28 04:06:31,768 | INFO     | architecture information:
[2025-05-27 21:06:42] 2025-05-28 04:06:31,783 | INFO     | executing command: cat /etc/os-release
[2025-05-27 21:06:42] 2025-05-28 04:06:31,829 | INFO     | cat /etc/os-release:
[2025-05-27 21:06:42] NAME="CentOS Linux"
[2025-05-27 21:06:42] VERSION="7 (Core)"
[2025-05-27 21:06:42] ID="centos"
[2025-05-27 21:06:42] ID_LIKE="rhel fedora"
[2025-05-27 21:06:42] VERSION_ID="7"
[2025-05-27 21:06:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 21:06:42] ANSI_COLOR="0;31"
[2025-05-27 21:06:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 21:06:42] HOME_URL="https://www.centos.org/"
[2025-05-27 21:06:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 21:06:42] 
[2025-05-27 21:06:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 21:06:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 21:06:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 21:06:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 21:06:42] 
[2025-05-27 21:06:42] 2025-05-28 04:06:31,829 | INFO     | **************************************
[2025-05-27 21:06:42] 2025-05-28 04:06:32,331 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-27 21:06:42] 2025-05-28 04:06:32,342 | INFO     | sufficient remaining disk space (2062673772544 B)
[2025-05-27 21:06:42] 2025-05-28 04:06:32,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 21:06:42] 2025-05-28 04:06:32,343 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 21:06:42] 2025-05-28 04:06:32,343 | INFO     | update_server=False
[2025-05-27 21:06:42] 2025-05-28 04:06:32,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 21:06:42] 2025-05-28 04:06:32,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 21:06:42] 2025-05-28 04:06:32,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 21:06:42] 2025-05-28 04:06:32,345 | INFO     | aborting loop
[2025-05-27 21:06:42] 2025-05-28 04:06:32,428 | INFO     | all job control threads have been joined
[2025-05-27 21:06:42] 2025-05-28 04:06:32,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 21:06:42] 2025-05-28 04:06:32,793 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 21:06:42] 2025-05-28 04:06:32,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 21:06:42] 2025-05-28 04:06:32,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 21:06:42] 2025-05-28 04:06:33,349 | INFO     | [job] retrieve thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:33,359 | INFO     | [job] job monitor thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:33,431 | INFO     | [job] validate thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:33,436 | INFO     | [job] control thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:33,436 | INFO     | all data control threads have been joined
[2025-05-27 21:06:42] 2025-05-28 04:06:33,734 | INFO     | all payload control threads have been joined
[2025-05-27 21:06:42] 2025-05-28 04:06:33,768 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:33,778 | INFO     | [data] copytool_in thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:33,781 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:33,936 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:34,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:34,350 | INFO     | [data] copytool_out thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:34,441 | INFO     | [data] control thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:34,485 | INFO     | [payload] validate_post thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:34,739 | INFO     | [payload] control thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:34,892 | INFO     | [payload] failed_post thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:35,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 21:06:42] 2025-05-28 04:06:36,191 | INFO     | [job] queue monitor thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:36,570 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 21:06:42] 2025-05-28 04:06:36,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348060960576)>', '<ExcThread(monitor, started 140347741017856)>']
[2025-05-27 21:06:42] 2025-05-28 04:06:37,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 21:06:42] 2025-05-28 04:06:37,828 | INFO     | [monitor] control thread has ended
[2025-05-27 21:06:42] 2025-05-28 04:06:41,947 | INFO     | all workflow threads have been joined
[2025-05-27 21:06:42] 2025-05-28 04:06:41,947 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 21:06:42] 2025-05-28 04:06:41,947 | INFO     | traces error code: 0
[2025-05-27 21:06:42] 2025-05-28 04:06:41,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 21:06:42] 2025-05-28 04:06:42,100 [wrapper] ==== pilot stdout END ====
[2025-05-27 21:06:42] 2025-05-28 04:06:42,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 21:06:42] 2025-05-28 04:06:42,104 [wrapper] pilotpid: 4154212
[2025-05-27 21:06:42] 2025-05-28 04:06:42,105 [wrapper] Pilot exit status: 0
[2025-05-27 21:06:42] 2025-05-28 04:06:42,112 [wrapper] pandaids: 6667883018
[2025-05-27 21:06:42] 2025-05-28 04:06:42,145 [wrapper] cleanup supervisor_pilot 4154218 4154213
[2025-05-27 21:06:42] 2025-05-28 04:06:42,147 [wrapper] Test setup, not cleaning
[2025-05-27 21:06:42] 2025-05-28 04:06:42,148 [wrapper] apfmon messages muted
[2025-05-27 21:06:42] 2025-05-28 04:06:42,150 [wrapper] ==== wrapper stdout END ====
[2025-05-27 21:06:42] 2025-05-28 04:06:42,152 [wrapper] ==== wrapper stderr END ====
[2025-05-27 21:06:42]  *** Error codes and diagnostics ***
[2025-05-27 21:06:42]     "exeErrorCode": 65,
[2025-05-27 21:06:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 21:06:42]     "pilotErrorCode": 1305,
[2025-05-27 21:06:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 21:06:42]  *** Listing of results directory ***
[2025-05-27 21:06:42] total 221468
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc    495897 May 27 17:38 pilot3.tar.gz
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc      5111 May 27 18:06 queuedata.json
[2025-05-27 21:06:42] -rwx------. 1 boinc boinc     37140 May 27 18:08 runpilot2-wrapper.sh
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc       100 May 27 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 21:06:42] -rwxr-xr-x. 1 boinc boinc      7986 May 27 21:03 run_atlas
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc       105 May 27 21:03 job.xml
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc      6602 May 27 21:03 init_data.xml
[2025-05-27 21:06:42] -rw-r--r--. 2 boinc boinc 222755655 May 27 21:03 EVNT.44871834._002985.pool.root.1
[2025-05-27 21:06:42] -rw-r--r--. 2 boinc boinc     15093 May 27 21:03 start_atlas.sh
[2025-05-27 21:06:42] drwxrwx--x. 2 boinc boinc      4096 May 27 21:03 shared
[2025-05-27 21:06:42] -rw-r--r--. 2 boinc boinc    508887 May 27 21:03 input.tar.gz
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc         0 May 27 21:03 boinc_lockfile
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc      2559 May 27 21:03 pandaJob.out
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc    991169 May 27 21:03 agis_schedconf.cvmfs.json
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc   1603667 May 27 21:03 agis_ddmendpoints.agis.ALL.json
[2025-05-27 21:06:42] drwx------. 4 boinc boinc      4096 May 27 21:03 pilot3
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc       522 May 27 21:04 boinc_task_state.xml
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc       988 May 27 21:04 memory_monitor_summary.json
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc     20541 May 27 21:04 log.44871837._076323.job.log.tgz.1
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc        95 May 27 21:05 pilot_heartbeat.json
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc      8350 May 27 21:06 heartbeat.json
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc        22 May 27 21:06 wrapper_checkpoint.txt
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc      4352 May 27 21:06 pilotlog.txt
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc      8192 May 27 21:06 boinc_mmap_file
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc     73844 May 27 21:06 log.44871837._076323.job.log.1
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc       188 May 27 21:06 output.list
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc       620 May 27 21:06 runtime_log
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc    112640 May 27 21:06 result.tar.gz
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc      8484 May 27 21:06 runtime_log.err
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc       645 May 27 21:06 io4MDmSSKe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRgSKDmI6Ridm.diag
[2025-05-27 21:06:42] -rw-r--r--. 1 boinc boinc     21450 May 27 21:06 stderr.txt
[2025-05-27 21:06:42] No HITS result produced
[2025-05-27 21:06:42]  *** Contents of shared directory: ***
[2025-05-27 21:06:42] total 218164
[2025-05-27 21:06:42] -rw-r--r--. 2 boinc boinc 222755655 May 27 21:03 ATLAS.root_0
[2025-05-27 21:06:42] -rw-r--r--. 2 boinc boinc     15093 May 27 21:03 start_atlas.sh
[2025-05-27 21:06:42] -rw-r--r--. 2 boinc boinc    508887 May 27 21:03 input.tar.gz
[2025-05-27 21:06:42] -rw-------. 1 boinc boinc    112640 May 27 21:06 result.tar.gz
21:06:43 (4150508): run_atlas exited; CPU time 19.582759
21:06:43 (4150508): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN