| Name | Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm_2 |
| Workunit | 232645281 |
| Created | 28 May 2025, 0:46:21 UTC |
| Sent | 28 May 2025, 3:20:17 UTC |
| Report deadline | 5 Jun 2025, 3:20:17 UTC |
| Received | 6 Jun 2025, 17:39:32 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 10855809 |
| Run time | 4 hours 10 min 48 sec |
| CPU time | 15 hours 20 min 10 sec |
| Validate state | Task was reported too late to validate |
| Credit | 0.00 |
| Device peak FLOPS | 15.83 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.51 GB |
| Peak swap size | 35.51 GB |
| Peak disk usage | 823.62 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 23:00:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-05-30 23:00:52] apptainer works
[2025-05-30 23:00:52] Set ATHENA_PROC_NUMBER=4
[2025-05-30 23:00:52] Set ATHENA_CORE_NUMBER=4
[2025-05-30 23:00:52] Starting ATLAS job with PandaID=6667365418
[2025-05-30 23:00:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:19:06 (1730720): wrapper (7.7.26015): starting
23:19:06 (1730720): wrapper: running run_atlas (--nthreads 4)
[2025-05-30 23:19:06] Arguments: --nthreads 4
[2025-05-30 23:19:06] Threads: 4
[2025-05-30 23:19:06] This job has been restarted, cleaning up previous attempt
[2025-05-30 23:19:06] Checking for CVMFS
[2025-05-30 23:19:06] No cvmfs_config command found, will try listing directly
[2025-05-30 23:19:06] CVMFS is ok
[2025-05-30 23:19:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 23:19:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 23:19:06] Further information can be found at the LHC@home message board.
[2025-05-30 23:19:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 23:19:06] Checking for apptainer binary...
[2025-05-30 23:19:06] which: no apptainer in ((null))
[2025-05-30 23:19:06] apptainer is not installed, using version from CVMFS
[2025-05-30 23:19:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 23:19:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-05-30 23:19:07] apptainer works
[2025-05-30 23:19:07] Set ATHENA_PROC_NUMBER=4
[2025-05-30 23:19:07] Set ATHENA_CORE_NUMBER=4
[2025-05-30 23:19:07] Starting ATLAS job with PandaID=6667365418
[2025-05-30 23:19:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:23:51 (14039): wrapper (7.7.26015): starting
10:23:51 (14039): wrapper: running run_atlas (--nthreads 4)
[2025-06-02 10:23:51] Arguments: --nthreads 4
[2025-06-02 10:23:51] Threads: 4
[2025-06-02 10:23:51] This job has been restarted, cleaning up previous attempt
[2025-06-02 10:23:51] Checking for CVMFS
[2025-06-02 10:23:51] No cvmfs_config command found, will try listing directly
[2025-06-02 10:23:52] CVMFS is ok
[2025-06-02 10:23:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 10:23:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 10:23:52] Further information can be found at the LHC@home message board.
[2025-06-02 10:23:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 10:23:52] Checking for apptainer binary...
[2025-06-02 10:23:52] which: no apptainer in ((null))
[2025-06-02 10:23:52] apptainer is not installed, using version from CVMFS
[2025-06-02 10:23:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 10:23:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-02 10:23:52] apptainer works
[2025-06-02 10:23:52] Set ATHENA_PROC_NUMBER=4
[2025-06-02 10:23:52] Set ATHENA_CORE_NUMBER=4
[2025-06-02 10:23:52] Starting ATLAS job with PandaID=6667365418
[2025-06-02 10:23:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 10:27:02] Job failed
[2025-06-02 10:27:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-06-02 10:27:02] ++ pwd
[2025-06-02 10:27:02] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot12/slots/0/
[2025-06-02 10:27:02] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot12/slots/0/
[2025-06-02 10:27:02] + mv ATLAS.root_0 EVNT.44871834._002789.pool.root.1
[2025-06-02 10:27:02] mv: 'ATLAS.root_0' and 'EVNT.44871834._002789.pool.root.1' are the same file
[2025-06-02 10:27:02] + tar --strip-components=5 -xvf input.tar.gz
[2025-06-02 10:27:02] + umask 077
[2025-06-02 10:27:02] ++ date +%s
[2025-06-02 10:27:02] + ACCOUNTING_STARTTIME=1748852632
[2025-06-02 10:27:02] + echo 'Detecting resource accounting method available for the job.'
[2025-06-02 10:27:02] Detecting resource accounting method available for the job.
[2025-06-02 10:27:02] + JOB_ACCOUNTING=
[2025-06-02 10:27:02] + command -v arc-job-cgroup
[2025-06-02 10:27:02] + '[' -z '' ']'
[2025-06-02 10:27:02] + GNU_TIME=/usr/bin/time
[2025-06-02 10:27:02] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-06-02 10:27:02] Looking for /usr/bin/time tool for accounting measurements
[2025-06-02 10:27:02] + '[' '!' -z /usr/bin/time ']'
[2025-06-02 10:27:02] + /usr/bin/time --version
[2025-06-02 10:27:02] + echo 'GNU time found and will be used for job accounting.'
[2025-06-02 10:27:02] GNU time found and will be used for job accounting.
[2025-06-02 10:27:02] + JOB_ACCOUNTING=gnutime
[2025-06-02 10:27:02] + '[' -z gnutime ']'
[2025-06-02 10:27:02] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-02 10:27:02] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-02 10:27:02] + export GTAG=http://aipanda404.cern.ch/data/jobs/2025-05-27/BOINC_MCORE/6667365418.out
[2025-06-02 10:27:02] + GTAG=http://aipanda404.cern.ch/data/jobs/2025-05-27/BOINC_MCORE/6667365418.out
[2025-06-02 10:27:02] + export PILOT_NOKILL=YES
[2025-06-02 10:27:02] + PILOT_NOKILL=YES
[2025-06-02 10:27:02] + export GRID_GLOBAL_JOBID=Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm
[2025-06-02 10:27:02] + GRID_GLOBAL_JOBID=Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm
[2025-06-02 10:27:02] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm
[2025-06-02 10:27:02] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm
[2025-06-02 10:27:02] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-02 10:27:02] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-02 10:27:02] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-06-02 10:27:02] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-06-02 10:27:02] ++ pwd
[2025-06-02 10:27:02] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot12/slots/0
[2025-06-02 10:27:02] + RUNTIME_JOB_STDIN=/dev/null
[2025-06-02 10:27:02] ++ pwd
[2025-06-02 10:27:02] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot12/slots/0/log.44871837._071002.job.log.1
[2025-06-02 10:27:02] ++ pwd
[2025-06-02 10:27:02] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot12/slots/0/log.44871837._071002.job.log.1
[2025-06-02 10:27:02] ++ pwd
[2025-06-02 10:27:02] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot12/slots/0.diag
[2025-06-02 10:27:02] + '[' '!' -z '' ']'
[2025-06-02 10:27:02] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-06-02 10:27:02] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-06-02 10:27:02] + RUNTIME_FRONTEND_SEES_NODE=
[2025-06-02 10:27:02] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-06-02 10:27:02] + '[' '!' -z '' ']'
[2025-06-02 10:27:02] + '[' -z yes ']'
[2025-06-02 10:27:02] ++ pwd
[2025-06-02 10:27:02] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot12/slots/0/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag
[2025-06-02 10:27:02] + runtimeenvironments=
[2025-06-02 10:27:02] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-02 10:27:02] + RTE_function_0 1
[2025-06-02 10:27:02] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-02 10:27:02] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-02 10:27:02] + export BOINC_APP=ATLAS
[2025-06-02 10:27:02] + BOINC_APP=ATLAS
[2025-06-02 10:27:02] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-02 10:27:02] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-02 10:27:02] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-02 10:27:02] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-02 10:27:02] + '[' -z 1 ']'
[2025-06-02 10:27:02] + '[' 1 == 1 ']'
[2025-06-02 10:27:02] + shift
[2025-06-02 10:27:02] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot12/slots/0/
[2025-06-02 10:27:02] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot12/slots/0/
[2025-06-02 10:27:02] + '[' 0 -ne 0 ']'
[2025-06-02 10:27:02] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-06-02 10:27:02] + '[' -f /etc/os-release ']'
[2025-06-02 10:27:02] +++ cat /etc/os-release
[2025-06-02 10:27:02] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-06-02 10:27:02] +++ NAME='CentOS Linux'
[2025-06-02 10:27:02] +++ VERSION='7 (Core)'
[2025-06-02 10:27:02] +++ ID=centos
[2025-06-02 10:27:02] +++ ID_LIKE='rhel fedora'
[2025-06-02 10:27:02] +++ VERSION_ID=7
[2025-06-02 10:27:02] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-06-02 10:27:02] +++ ANSI_COLOR='0;31'
[2025-06-02 10:27:02] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-06-02 10:27:02] +++ HOME_URL=https://www.centos.org/
[2025-06-02 10:27:02] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-06-02 10:27:02] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-06-02 10:27:02] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-06-02 10:27:02] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-06-02 10:27:02] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-06-02 10:27:02] ++ echo 'CentOS Linux 7 (Core)'
[2025-06-02 10:27:02] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-06-02 10:27:02] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-06-02 10:27:02] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-06-02 10:27:02] + HOME=/scratch/boinc/var/slot12/slots/0
[2025-06-02 10:27:02] + export HOME
[2025-06-02 10:27:02] + cd /scratch/boinc/var/slot12/slots/0
[2025-06-02 10:27:02] + '[' '!' -z '' ']'
[2025-06-02 10:27:02] + '[' -z '' ']'
[2025-06-02 10:27:02] ++ /bin/hostname -f
[2025-06-02 10:27:02] + nodename=skurut04.grid.cesnet.cz
[2025-06-02 10:27:02] + echo nodename=skurut04.grid.cesnet.cz
[2025-06-02 10:27:02] + echo Processors=2
[2025-06-02 10:27:02] + echo Nodecount=1
[2025-06-02 10:27:02] + echo Benchmark=HEPSPEC:1.0
[2025-06-02 10:27:02] + executable=./runpilot2-wrapper.sh
[2025-06-02 10:27:02] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-06-02 10:27:02] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-06-02 10:27:02] ++ head -n 1
[2025-06-02 10:27:02] ++ tr -d '\0'
[2025-06-02 10:27:02] + line1='#!/bin/bash'
[2025-06-02 10:27:02] ++ echo '#!/bin/bash'
[2025-06-02 10:27:02] ++ sed -n 's/^#! *//p'
[2025-06-02 10:27:02] + shebang=/bin/bash
[2025-06-02 10:27:02] ++ echo /bin/bash
[2025-06-02 10:27:02] ++ awk '{print $1}'
[2025-06-02 10:27:02] + interpreter=/bin/bash
[2025-06-02 10:27:02] + '[' /bin/bash = /usr/bin/env ']'
[2025-06-02 10:27:02] + '[' x/bin/bash = x ']'
[2025-06-02 10:27:02] + type /bin/bash
[2025-06-02 10:27:02] + '[' xgnutime = xgnutime ']'
[2025-06-02 10:27:02] + /usr/bin/time -o /scratch/boinc/var/slot12/slots/0/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-06-02 10:27:02] + RESULT=2
[2025-06-02 10:27:02] + sed -i -e /nodename=/d /scratch/boinc/var/slot12/slots/0/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag
[2025-06-02 10:27:02] ++ grep domain_name init_data.xml
[2025-06-02 10:27:02] ++ awk -F '>' '{print $2}'
[2025-06-02 10:27:02] ++ awk -F '<' '{print $1}'
[2025-06-02 10:27:02] ++ sed -e 's# #_#g'
[2025-06-02 10:27:02] + hostname=skurut04.grid.cesnet.cz
[2025-06-02 10:27:02] ++ grep user_name init_data.xml
[2025-06-02 10:27:02] ++ awk -F '>' '{print $2}'
[2025-06-02 10:27:02] ++ awk -F '<' '{print $1}'
[2025-06-02 10:27:02] ++ sed -e 's# #_#g'
[2025-06-02 10:27:02] + username=praguelcg2
[2025-06-02 10:27:02] + nodename=praguelcg2@skurut04.grid.cesnet.cz
[2025-06-02 10:27:02] + echo nodename=praguelcg2@skurut04.grid.cesnet.cz
[2025-06-02 10:27:02] + '[' -n 4 ']'
[2025-06-02 10:27:02] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot12/slots/0/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag
[2025-06-02 10:27:02] + echo exitcode=2
[2025-06-02 10:27:02] + runtimeenvironments=
[2025-06-02 10:27:02] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-02 10:27:02] + RTE_function_0 2
[2025-06-02 10:27:02] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-02 10:27:02] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-02 10:27:02] + export BOINC_APP=ATLAS
[2025-06-02 10:27:02] + BOINC_APP=ATLAS
[2025-06-02 10:27:02] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-02 10:27:02] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-02 10:27:02] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-02 10:27:02] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-02 10:27:02] + '[' -z 2 ']'
[2025-06-02 10:27:02] + '[' 2 == 1 ']'
[2025-06-02 10:27:02] + '[' 0 -ne 0 ']'
[2025-06-02 10:27:02] + echo 'zip all output files'
[2025-06-02 10:27:02] + flist='*.diag '
[2025-06-02 10:27:02] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-02 10:27:02] + '[' -e ./heartbeat.json ']'
[2025-06-02 10:27:02] + flist='*.diag ./heartbeat.json'
[2025-06-02 10:27:02] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-02 10:27:02] + '[' -e ./output.list ']'
[2025-06-02 10:27:02] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-02 10:27:02] + '[' -e ./log.44871837._071002.job.log.1 ']'
[2025-06-02 10:27:02] + flist='*.diag ./heartbeat.json ./log.44871837._071002.job.log.1'
[2025-06-02 10:27:02] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-02 10:27:02] + '[' -e ./log.44871837._071002.job.log.1 ']'
[2025-06-02 10:27:02] + flist='*.diag ./heartbeat.json ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1'
[2025-06-02 10:27:02] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-02 10:27:02] + '[' -e ./gmlog/ ']'
[2025-06-02 10:27:02] + '[' -f output.list ']'
[2025-06-02 10:27:02] + tar cvf result.tar.gz Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag ./heartbeat.json ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1
[2025-06-02 10:27:02] + '[' xgnutime = xcgroup ']'
[2025-06-02 10:27:02] + '[' -n '' ']'
[2025-06-02 10:27:02] + '[' -n '' ']'
[2025-06-02 10:27:02] ++ date +%s
[2025-06-02 10:27:02] + ACCOUNTING_ENDTIME=1748852822
[2025-06-02 10:27:02] ++ date -d '1970-01-01 UTC 1748852632 seconds' +%Y%m%d%H%M%SZ
[2025-06-02 10:27:02] + echo LRMSStartTime=20250602102352Z
[2025-06-02 10:27:02] ++ date -d '1970-01-01 UTC 1748852822 seconds' +%Y%m%d%H%M%SZ
[2025-06-02 10:27:02] + echo LRMSEndTime=20250602102702Z
[2025-06-02 10:27:02] + echo walltime=190
[2025-06-02 10:27:02] + echo exitcode=2
[2025-06-02 10:27:02] + exit 2
[2025-06-02 10:27:02] ./pilotlog.txt
[2025-06-02 10:27:02] ./PanDA_Pilot-6667365418/log.EVNTtoHITS
[2025-06-02 10:27:02] ./PanDA_Pilot-6667365418/pilotlog.txt
[2025-06-02 10:27:02] ./PanDA_Pilot-6667365418/prmon.log
[2025-06-02 10:27:02] ./PanDA_Pilot-6667365418/PoolFileCatalog.xml
[2025-06-02 10:27:02] ./runtime_log
[2025-06-02 10:27:02] ./runtime_log.err
[2025-06-02 10:27:02] ./pilot3/pilot/util/realtimelogger.py
[2025-06-02 10:27:02] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-06-02 10:27:02] ./pilot3/pilot/util/loggingsupport.py
[2025-06-02 10:27:02] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-06-02 10:27:02] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-06-02 10:27:02] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-06-02 10:27:02] ./log.44871837._071002.job.log.1
08:03:39 (1923254): wrapper (7.7.26015): starting
08:03:39 (1923254): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 08:03:39] Arguments: --nthreads 4
[2025-06-03 08:03:39] Threads: 4
[2025-06-03 08:03:39] This job has been restarted, cleaning up previous attempt
[2025-06-03 08:03:39] Checking for CVMFS
[2025-06-03 08:03:39] No cvmfs_config command found, will try listing directly
[2025-06-03 08:03:39] CVMFS is ok
[2025-06-03 08:03:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 08:03:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 08:03:39] Further information can be found at the LHC@home message board.
[2025-06-03 08:03:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:03:39] Checking for apptainer binary...
[2025-06-03 08:03:39] which: no apptainer in ((null))
[2025-06-03 08:03:39] apptainer is not installed, using version from CVMFS
[2025-06-03 08:03:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:03:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-03 08:03:39] apptainer works
[2025-06-03 08:03:39] Set ATHENA_PROC_NUMBER=4
[2025-06-03 08:03:39] Set ATHENA_CORE_NUMBER=4
[2025-06-03 08:03:39] Starting ATLAS job with PandaID=6667365418
[2025-06-03 08:03:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:19:06 (3021560): wrapper (7.7.26015): starting
19:19:06 (3021560): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 19:19:06] Arguments: --nthreads 4
[2025-06-03 19:19:06] Threads: 4
[2025-06-03 19:19:06] This job has been restarted, cleaning up previous attempt
[2025-06-03 19:19:06] Checking for CVMFS
[2025-06-03 19:19:06] No cvmfs_config command found, will try listing directly
[2025-06-03 19:19:06] CVMFS is ok
[2025-06-03 19:19:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:19:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:19:06] Further information can be found at the LHC@home message board.
[2025-06-03 19:19:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:19:06] Checking for apptainer binary...
[2025-06-03 19:19:06] which: no apptainer in ((null))
[2025-06-03 19:19:06] apptainer is not installed, using version from CVMFS
[2025-06-03 19:19:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:19:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-03 19:19:07] apptainer works
[2025-06-03 19:19:07] Set ATHENA_PROC_NUMBER=4
[2025-06-03 19:19:07] Set ATHENA_CORE_NUMBER=4
[2025-06-03 19:19:07] Starting ATLAS job with PandaID=6667365418
[2025-06-03 19:19:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:05:42 (1182704): wrapper (7.7.26015): starting
16:05:42 (1182704): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 16:05:42] Arguments: --nthreads 4
[2025-06-06 16:05:42] Threads: 4
[2025-06-06 16:05:42] This job has been restarted, cleaning up previous attempt
[2025-06-06 16:05:42] Checking for CVMFS
[2025-06-06 16:05:42] No cvmfs_config command found, will try listing directly
[2025-06-06 16:05:42] CVMFS is ok
[2025-06-06 16:05:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 16:05:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 16:05:42] Further information can be found at the LHC@home message board.
[2025-06-06 16:05:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 16:05:42] Checking for apptainer binary...
[2025-06-06 16:05:42] which: no apptainer in ((null))
[2025-06-06 16:05:42] apptainer is not installed, using version from CVMFS
[2025-06-06 16:05:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 16:05:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-06 16:05:42] apptainer works
[2025-06-06 16:05:42] Set ATHENA_PROC_NUMBER=4
[2025-06-06 16:05:42] Set ATHENA_CORE_NUMBER=4
[2025-06-06 16:05:42] Starting ATLAS job with PandaID=6667365418
[2025-06-06 16:05:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 16:08:50] Job failed
[2025-06-06 16:08:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-06-06 16:08:50] ++ pwd
[2025-06-06 16:08:50] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot12/slots/0/
[2025-06-06 16:08:50] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot12/slots/0/
[2025-06-06 16:08:50] + mv ATLAS.root_0 EVNT.44871834._002789.pool.root.1
[2025-06-06 16:08:50] mv: 'ATLAS.root_0' and 'EVNT.44871834._002789.pool.root.1' are the same file
[2025-06-06 16:08:50] + tar --strip-components=5 -xvf input.tar.gz
[2025-06-06 16:08:50] + umask 077
[2025-06-06 16:08:50] ++ date +%s
[2025-06-06 16:08:50] + ACCOUNTING_STARTTIME=1749218742
[2025-06-06 16:08:50] + echo 'Detecting resource accounting method available for the job.'
[2025-06-06 16:08:50] Detecting resource accounting method available for the job.
[2025-06-06 16:08:50] + JOB_ACCOUNTING=
[2025-06-06 16:08:50] + command -v arc-job-cgroup
[2025-06-06 16:08:50] + '[' -z '' ']'
[2025-06-06 16:08:50] + GNU_TIME=/usr/bin/time
[2025-06-06 16:08:50] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-06-06 16:08:50] Looking for /usr/bin/time tool for accounting measurements
[2025-06-06 16:08:50] + '[' '!' -z /usr/bin/time ']'
[2025-06-06 16:08:50] + /usr/bin/time --version
[2025-06-06 16:08:50] + echo 'GNU time found and will be used for job accounting.'
[2025-06-06 16:08:50] GNU time found and will be used for job accounting.
[2025-06-06 16:08:50] + JOB_ACCOUNTING=gnutime
[2025-06-06 16:08:50] + '[' -z gnutime ']'
[2025-06-06 16:08:50] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-06 16:08:50] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-06 16:08:50] + export GTAG=http://aipanda404.cern.ch/data/jobs/2025-05-27/BOINC_MCORE/6667365418.out
[2025-06-06 16:08:50] + GTAG=http://aipanda404.cern.ch/data/jobs/2025-05-27/BOINC_MCORE/6667365418.out
[2025-06-06 16:08:50] + export PILOT_NOKILL=YES
[2025-06-06 16:08:50] + PILOT_NOKILL=YES
[2025-06-06 16:08:50] + export GRID_GLOBAL_JOBID=Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm
[2025-06-06 16:08:50] + GRID_GLOBAL_JOBID=Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm
[2025-06-06 16:08:50] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm
[2025-06-06 16:08:50] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm
[2025-06-06 16:08:50] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-06 16:08:50] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-06 16:08:50] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-06-06 16:08:50] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-06-06 16:08:50] ++ pwd
[2025-06-06 16:08:50] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot12/slots/0
[2025-06-06 16:08:50] + RUNTIME_JOB_STDIN=/dev/null
[2025-06-06 16:08:50] ++ pwd
[2025-06-06 16:08:50] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot12/slots/0/log.44871837._071002.job.log.1
[2025-06-06 16:08:50] ++ pwd
[2025-06-06 16:08:50] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot12/slots/0/log.44871837._071002.job.log.1
[2025-06-06 16:08:50] ++ pwd
[2025-06-06 16:08:50] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot12/slots/0.diag
[2025-06-06 16:08:50] + '[' '!' -z '' ']'
[2025-06-06 16:08:50] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-06-06 16:08:50] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-06-06 16:08:50] + RUNTIME_FRONTEND_SEES_NODE=
[2025-06-06 16:08:50] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-06-06 16:08:50] + '[' '!' -z '' ']'
[2025-06-06 16:08:50] + '[' -z yes ']'
[2025-06-06 16:08:50] ++ pwd
[2025-06-06 16:08:50] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot12/slots/0/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag
[2025-06-06 16:08:50] + runtimeenvironments=
[2025-06-06 16:08:50] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-06 16:08:50] + RTE_function_0 1
[2025-06-06 16:08:50] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-06 16:08:50] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-06 16:08:50] + export BOINC_APP=ATLAS
[2025-06-06 16:08:50] + BOINC_APP=ATLAS
[2025-06-06 16:08:50] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-06 16:08:50] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-06 16:08:50] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-06 16:08:50] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-06 16:08:50] + '[' -z 1 ']'
[2025-06-06 16:08:50] + '[' 1 == 1 ']'
[2025-06-06 16:08:50] + shift
[2025-06-06 16:08:50] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot12/slots/0/
[2025-06-06 16:08:50] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot12/slots/0/
[2025-06-06 16:08:50] + '[' 0 -ne 0 ']'
[2025-06-06 16:08:50] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-06-06 16:08:50] + '[' -f /etc/os-release ']'
[2025-06-06 16:08:50] +++ cat /etc/os-release
[2025-06-06 16:08:50] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-06-06 16:08:50] +++ NAME='CentOS Linux'
[2025-06-06 16:08:50] +++ VERSION='7 (Core)'
[2025-06-06 16:08:50] +++ ID=centos
[2025-06-06 16:08:50] +++ ID_LIKE='rhel fedora'
[2025-06-06 16:08:50] +++ VERSION_ID=7
[2025-06-06 16:08:50] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-06-06 16:08:50] +++ ANSI_COLOR='0;31'
[2025-06-06 16:08:50] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-06-06 16:08:50] +++ HOME_URL=https://www.centos.org/
[2025-06-06 16:08:50] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-06-06 16:08:50] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-06-06 16:08:50] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-06-06 16:08:50] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-06-06 16:08:50] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-06-06 16:08:50] ++ echo 'CentOS Linux 7 (Core)'
[2025-06-06 16:08:50] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-06-06 16:08:50] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-06-06 16:08:50] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-06-06 16:08:50] + HOME=/scratch/boinc/var/slot12/slots/0
[2025-06-06 16:08:50] + export HOME
[2025-06-06 16:08:50] + cd /scratch/boinc/var/slot12/slots/0
[2025-06-06 16:08:50] + '[' '!' -z '' ']'
[2025-06-06 16:08:50] + '[' -z '' ']'
[2025-06-06 16:08:50] ++ /bin/hostname -f
[2025-06-06 16:08:50] + nodename=skurut04.grid.cesnet.cz
[2025-06-06 16:08:50] + echo nodename=skurut04.grid.cesnet.cz
[2025-06-06 16:08:50] + echo Processors=2
[2025-06-06 16:08:50] + echo Nodecount=1
[2025-06-06 16:08:50] + echo Benchmark=HEPSPEC:1.0
[2025-06-06 16:08:50] + executable=./runpilot2-wrapper.sh
[2025-06-06 16:08:50] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-06-06 16:08:50] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-06-06 16:08:50] ++ head -n 1
[2025-06-06 16:08:50] ++ tr -d '\0'
[2025-06-06 16:08:50] + line1='#!/bin/bash'
[2025-06-06 16:08:50] ++ echo '#!/bin/bash'
[2025-06-06 16:08:50] ++ sed -n 's/^#! *//p'
[2025-06-06 16:08:50] + shebang=/bin/bash
[2025-06-06 16:08:50] ++ echo /bin/bash
[2025-06-06 16:08:50] ++ awk '{print $1}'
[2025-06-06 16:08:50] + interpreter=/bin/bash
[2025-06-06 16:08:50] + '[' /bin/bash = /usr/bin/env ']'
[2025-06-06 16:08:50] + '[' x/bin/bash = x ']'
[2025-06-06 16:08:50] + type /bin/bash
[2025-06-06 16:08:50] + '[' xgnutime = xgnutime ']'
[2025-06-06 16:08:50] + /usr/bin/time -o /scratch/boinc/var/slot12/slots/0/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-06-06 16:08:50] + RESULT=2
[2025-06-06 16:08:50] + sed -i -e /nodename=/d /scratch/boinc/var/slot12/slots/0/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag
[2025-06-06 16:08:50] ++ grep domain_name init_data.xml
[2025-06-06 16:08:50] ++ awk -F '>' '{print $2}'
[2025-06-06 16:08:50] ++ awk -F '<' '{print $1}'
[2025-06-06 16:08:50] ++ sed -e 's# #_#g'
[2025-06-06 16:08:50] + hostname=skurut04.grid.cesnet.cz
[2025-06-06 16:08:50] ++ grep user_name init_data.xml
[2025-06-06 16:08:50] ++ awk -F '>' '{print $2}'
[2025-06-06 16:08:50] ++ awk -F '<' '{print $1}'
[2025-06-06 16:08:50] ++ sed -e 's# #_#g'
[2025-06-06 16:08:50] + username=praguelcg2
[2025-06-06 16:08:50] + nodename=praguelcg2@skurut04.grid.cesnet.cz
[2025-06-06 16:08:50] + echo nodename=praguelcg2@skurut04.grid.cesnet.cz
[2025-06-06 16:08:50] + '[' -n 4 ']'
[2025-06-06 16:08:50] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot12/slots/0/Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag
[2025-06-06 16:08:50] + echo exitcode=2
[2025-06-06 16:08:50] + runtimeenvironments=
[2025-06-06 16:08:50] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-06 16:08:50] + RTE_function_0 2
[2025-06-06 16:08:50] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-06 16:08:50] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-06 16:08:50] + export BOINC_APP=ATLAS
[2025-06-06 16:08:50] + BOINC_APP=ATLAS
[2025-06-06 16:08:50] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-06 16:08:50] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-06 16:08:50] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-06 16:08:50] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-06 16:08:50] + '[' -z 2 ']'
[2025-06-06 16:08:50] + '[' 2 == 1 ']'
[2025-06-06 16:08:50] + '[' 0 -ne 0 ']'
[2025-06-06 16:08:50] + echo 'zip all output files'
[2025-06-06 16:08:50] + flist='*.diag '
[2025-06-06 16:08:50] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-06 16:08:50] + '[' -e ./heartbeat.json ']'
[2025-06-06 16:08:50] + flist='*.diag ./heartbeat.json'
[2025-06-06 16:08:50] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-06 16:08:50] + '[' -e ./output.list ']'
[2025-06-06 16:08:50] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-06 16:08:50] + '[' -e ./log.44871837._071002.job.log.1 ']'
[2025-06-06 16:08:50] + flist='*.diag ./heartbeat.json ./log.44871837._071002.job.log.1'
[2025-06-06 16:08:50] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-06 16:08:50] + '[' -e ./log.44871837._071002.job.log.1 ']'
[2025-06-06 16:08:50] + flist='*.diag ./heartbeat.json ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1'
[2025-06-06 16:08:50] + for f in ./heartbeat.json ./output.list ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1 ./gmlog/
[2025-06-06 16:08:50] + '[' -e ./gmlog/ ']'
[2025-06-06 16:08:50] + '[' -f output.list ']'
[2025-06-06 16:08:50] + tar cvf result.tar.gz Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag ./heartbeat.json ./log.44871837._071002.job.log.1 ./log.44871837._071002.job.log.1
[2025-06-06 16:08:50] + '[' xgnutime = xcgroup ']'
[2025-06-06 16:08:50] + '[' -n '' ']'
[2025-06-06 16:08:50] + '[' -n '' ']'
[2025-06-06 16:08:50] ++ date +%s
[2025-06-06 16:08:50] + ACCOUNTING_ENDTIME=1749218930
[2025-06-06 16:08:50] ++ date -d '1970-01-01 UTC 1749218742 seconds' +%Y%m%d%H%M%SZ
[2025-06-06 16:08:50] + echo LRMSStartTime=20250606160542Z
[2025-06-06 16:08:50] ++ date -d '1970-01-01 UTC 1749218930 seconds' +%Y%m%d%H%M%SZ
[2025-06-06 16:08:50] + echo LRMSEndTime=20250606160850Z
[2025-06-06 16:08:50] + echo walltime=188
[2025-06-06 16:08:50] + echo exitcode=2
[2025-06-06 16:08:50] + exit 2
[2025-06-06 16:08:50] ./pilotlog.txt
[2025-06-06 16:08:50] ./PanDA_Pilot-6667365418/log.EVNTtoHITS
[2025-06-06 16:08:50] ./PanDA_Pilot-6667365418/pilotlog.txt
[2025-06-06 16:08:50] ./PanDA_Pilot-6667365418/prmon.log
[2025-06-06 16:08:50] ./PanDA_Pilot-6667365418/PoolFileCatalog.xml
[2025-06-06 16:08:50] ./runtime_log
[2025-06-06 16:08:50] ./runtime_log.err
[2025-06-06 16:08:50] ./pilot3/pilot/util/realtimelogger.py
[2025-06-06 16:08:50] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-06-06 16:08:50] ./pilot3/pilot/util/loggingsupport.py
[2025-06-06 16:08:50] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-06-06 16:08:50] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-06-06 16:08:50] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-06-06 16:08:50] ./log.44871837._071002.job.log.1
17:11:47 (1293544): wrapper (7.7.26015): starting
17:11:47 (1293544): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 17:11:47] Arguments: --nthreads 4
[2025-06-06 17:11:47] Threads: 4
[2025-06-06 17:11:47] This job has been restarted, cleaning up previous attempt
[2025-06-06 17:11:47] Checking for CVMFS
[2025-06-06 17:11:47] No cvmfs_config command found, will try listing directly
[2025-06-06 17:11:47] CVMFS is ok
[2025-06-06 17:11:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 17:11:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 17:11:47] Further information can be found at the LHC@home message board.
[2025-06-06 17:11:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 17:11:47] Checking for apptainer binary...
[2025-06-06 17:11:47] which: no apptainer in ((null))
[2025-06-06 17:11:47] apptainer is not installed, using version from CVMFS
[2025-06-06 17:11:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 17:11:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-06 17:11:47] apptainer works
[2025-06-06 17:11:47] Set ATHENA_PROC_NUMBER=4
[2025-06-06 17:11:47] Set ATHENA_CORE_NUMBER=4
[2025-06-06 17:11:47] Starting ATLAS job with PandaID=6667365418
[2025-06-06 17:11:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:49:49 (1332328): wrapper (7.7.26015): starting
17:49:49 (1332328): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 17:49:49] Arguments: --nthreads 4
[2025-06-06 17:49:49] Threads: 4
[2025-06-06 17:49:49] This job has been restarted, cleaning up previous attempt
[2025-06-06 17:49:49] Checking for CVMFS
[2025-06-06 17:49:49] No cvmfs_config command found, will try listing directly
[2025-06-06 17:49:49] CVMFS is ok
[2025-06-06 17:49:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 17:49:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 17:49:49] Further information can be found at the LHC@home message board.
[2025-06-06 17:49:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 17:49:49] Checking for apptainer binary...
[2025-06-06 17:49:49] which: no apptainer in ((null))
[2025-06-06 17:49:49] apptainer is not installed, using version from CVMFS
[2025-06-06 17:49:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 17:49:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-06 17:49:50] apptainer works
[2025-06-06 17:49:50] Set ATHENA_PROC_NUMBER=4
[2025-06-06 17:49:50] Set ATHENA_CORE_NUMBER=4
[2025-06-06 17:49:50] Starting ATLAS job with PandaID=6667365418
[2025-06-06 17:49:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 19:38:11] *** The last 200 lines of the pilot log: ***
[2025-06-06 19:38:11] 2025-06-06 17:37:48,427 | INFO | executing command: lscpu
[2025-06-06 19:38:11] 2025-06-06 17:37:48,462 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 19:38:11] 2025-06-06 17:37:49,108 | INFO | monitor loop #491: job 0:6667365418 is in state 'finished'
[2025-06-06 19:38:11] 2025-06-06 17:37:49,109 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 19:38:11] 2025-06-06 17:37:51,612 | INFO | monitor loop #492: job 0:6667365418 is in state 'finished'
[2025-06-06 19:38:11] 2025-06-06 17:37:51,612 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 19:38:11] 2025-06-06 17:37:52,246 | INFO | CPU arch script returned: x86-64-v4
[2025-06-06 19:38:11] 2025-06-06 17:37:52,247 | INFO | using path: /scratch/boinc/var/slot12/slots/0/PanDA_Pilot-6667365418/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 19:38:11] 2025-06-06 17:37:52,247 | INFO | extracted standard info from prmon json
[2025-06-06 19:38:11] 2025-06-06 17:37:52,247 | INFO | extracted standard memory fields from prmon json
[2025-06-06 19:38:11] 2025-06-06 17:37:52,247 | WARNING | GPU info not found in prmon json: 'gpu'
[2025-06-06 19:38:11] 2025-06-06 17:37:52,247 | WARNING | format EVNTtoHITS has no such key: dbData
[2025-06-06 19:38:11] 2025-06-06 17:37:52,247 | WARNING | format EVNTtoHITS has no such key: dbTime
[2025-06-06 19:38:11] 2025-06-06 17:37:52,249 | INFO | fitting pss+swap vs Time
[2025-06-06 19:38:11] 2025-06-06 17:37:52,249 | INFO | sum of square deviations: 369281342.5
[2025-06-06 19:38:11] 2025-06-06 17:37:52,249 | INFO | sum of deviations: -7420703436.0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | mean x: 1749228220.5
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | mean y: 2437845.0188679243
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | -- intersect: 35153154581.30379
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | intersect: 35153154581.30379
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | chi2: 1.4652478516097351
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | sum of square deviations: 319447850.0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | sum of deviations: -6506076939.000002
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | mean x: 1749228068.0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | mean y: 2440657.217821782
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | -- intersect: 35628325740.702736
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | intersect: 35628325740.702736
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | chi2: 1.464465628689673
[2025-06-06 19:38:11] 2025-06-06 17:37:52,250 | INFO | current chi2=1.464465628689673 (change=0.05338502419252075 %)
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | right removable region: 100
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | sum of square deviations: 319447850.0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | sum of deviations: -17180397643.0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | mean x: 1749228373.0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | mean y: 2466504.7623762377
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | -- intersect: 94078663970.3516
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | intersect: 94078663970.3516
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | chi2: 0.2149015727164736
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | current chi2=0.2149015727164736 (change=85.33343198692421 %)
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | sum of square deviations: 274312120.0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | sum of deviations: -13081692353.0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,251 | INFO | mean x: 1749228525.5
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | mean y: 2452634.8125
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | -- intersect: 83421549923.26923
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | intersect: 83421549923.26923
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | chi2: 0.20483066967508956
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | current chi2=0.20483066967508956 (change=4.686286337546206 %)
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | left removable region: 20
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | sum of square deviations: 158737860.0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | sum of deviations: -3835504045.5
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | mean x: 1749228647.5
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | mean y: 2420354.6625
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | -- intersect: 42268163095.49789
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | intersect: 42268163095.49789
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | chi2: 0.1368282876339578
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | -- intersect: 42268163095.49789
[2025-06-06 19:38:11] 2025-06-06 17:37:52,252 | INFO | current memory leak: -24.16 B/s (using 80 data points, chi2=0.14)
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | ..............................
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | . Timing measurements:
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | . get job = 0 s
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | . initial setup = 0 s
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | . payload setup = 4 s
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | . stage-in = 0 s
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | . payload execution = 6447 s
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | . stage-out = 0 s
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | . log creation = 0 s
[2025-06-06 19:38:11] 2025-06-06 17:37:52,253 | INFO | ..............................
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO |
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | job summary report
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | --------------------------------------------------
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | PanDA job id: 6667365418
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | task id: 44871837
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | errors: (none)
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | status: LOG_TRANSFER = DONE
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | pilot state: finished
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | transexitcode: 0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | exeerrorcode: 0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | exeerrordiag:
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | exitcode: 0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | exitmsg: OK
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | cpuconsumptiontime: 25048 s
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | nevents: 400
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | neventsw: 0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,567 | INFO | pid: 1343625
[2025-06-06 19:38:11] 2025-06-06 17:37:52,568 | INFO | pgrp: 1343625
[2025-06-06 19:38:11] 2025-06-06 17:37:52,568 | INFO | corecount: 4
[2025-06-06 19:38:11] 2025-06-06 17:37:52,568 | INFO | event service: False
[2025-06-06 19:38:11] 2025-06-06 17:37:52,568 | INFO | sizes: {0: 2397176, 1: 2397431, 3: 2397637, 11: 2397665, 6455: 2433685, 6461: 2433827}
[2025-06-06 19:38:11] 2025-06-06 17:37:52,568 | INFO | --------------------------------------------------
[2025-06-06 19:38:11] 2025-06-06 17:37:52,568 | INFO |
[2025-06-06 19:38:11] 2025-06-06 17:37:52,568 | INFO | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-06-06 19:38:11] 2025-06-06 17:37:52,581 | INFO | queue jobs had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue payloads had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue data_in had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue data_out had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue current_data_in had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue completed_jobids has 1 job(s)
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | queue messages had 0 job(s) [purged]
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | job 6667365418 has completed (purged errors)
[2025-06-06 19:38:11] 2025-06-06 17:37:52,582 | INFO | overall cleanup function is called
[2025-06-06 19:38:11] 2025-06-06 17:37:53,589 | INFO | --- collectZombieJob: --- 10, [1343625]
[2025-06-06 19:38:11] 2025-06-06 17:37:53,589 | INFO | zombie collector waiting for pid 1343625
[2025-06-06 19:38:11] 2025-06-06 17:37:53,589 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 19:38:11] 2025-06-06 17:37:53,589 | INFO | collected zombie processes
[2025-06-06 19:38:11] 2025-06-06 17:37:53,589 | INFO | will attempt to kill all subprocesses of pid=1343625
[2025-06-06 19:38:11] 2025-06-06 17:37:53,690 | INFO | process IDs to be killed: [1343625] (in reverse order)
[2025-06-06 19:38:11] 2025-06-06 17:37:53,732 | WARNING | found no corresponding commands to process id(s)
[2025-06-06 19:38:11] 2025-06-06 17:37:53,733 | INFO | Do not look for orphan processes in BOINC jobs
[2025-06-06 19:38:11] 2025-06-06 17:37:53,736 | INFO | did not find any defunct processes belonging to 1343625
[2025-06-06 19:38:11] 2025-06-06 17:37:53,740 | INFO | did not find any defunct processes belonging to 1343625
[2025-06-06 19:38:11] 2025-06-06 17:37:53,740 | INFO | ready for new job
[2025-06-06 19:38:11] 2025-06-06 17:37:53,740 | INFO | pilot has finished with previous job - re-establishing logging
[2025-06-06 19:38:11] 2025-06-06 17:37:53,741 | INFO | **************************************
[2025-06-06 19:38:11] 2025-06-06 17:37:53,741 | INFO | *** PanDA Pilot version 3.10.2.2 ***
[2025-06-06 19:38:11] 2025-06-06 17:37:53,741 | INFO | **************************************
[2025-06-06 19:38:11] 2025-06-06 17:37:53,741 | INFO |
[2025-06-06 19:38:11] 2025-06-06 17:37:53,743 | INFO | architecture information:
[2025-06-06 19:38:11] 2025-06-06 17:37:53,743 | INFO | executing command: cat /etc/os-release
[2025-06-06 19:38:11] 2025-06-06 17:37:53,751 | INFO | cat /etc/os-release:
[2025-06-06 19:38:11] NAME="CentOS Linux"
[2025-06-06 19:38:11] VERSION="7 (Core)"
[2025-06-06 19:38:11] ID="centos"
[2025-06-06 19:38:11] ID_LIKE="rhel fedora"
[2025-06-06 19:38:11] VERSION_ID="7"
[2025-06-06 19:38:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 19:38:11] ANSI_COLOR="0;31"
[2025-06-06 19:38:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 19:38:11] HOME_URL="https://www.centos.org/"
[2025-06-06 19:38:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 19:38:11]
[2025-06-06 19:38:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 19:38:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 19:38:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 19:38:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 19:38:11]
[2025-06-06 19:38:11] 2025-06-06 17:37:53,751 | INFO | **************************************
[2025-06-06 19:38:11] 2025-06-06 17:37:54,254 | INFO | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-06-06 19:38:11] 2025-06-06 17:37:54,264 | INFO | sufficient remaining disk space (719504539648 B)
[2025-06-06 19:38:11] 2025-06-06 17:37:54,264 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 19:38:11] 2025-06-06 17:37:54,264 | INFO | current server update state: UPDATING_FINAL
[2025-06-06 19:38:11] 2025-06-06 17:37:54,265 | INFO | update_server=False
[2025-06-06 19:38:11] 2025-06-06 17:37:54,265 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 19:38:11] 2025-06-06 17:37:54,265 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 19:38:11] 2025-06-06 17:37:54,265 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 19:38:11] 2025-06-06 17:37:54,265 | INFO | found 0 job(s) in 20 queues
[2025-06-06 19:38:11] 2025-06-06 17:37:54,265 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 19:38:11] 2025-06-06 17:37:54,265 | WARNING | will wait for a maximum of 300 s for threads to finish
[2025-06-06 19:38:11] 2025-06-06 17:37:54,292 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 19:38:11] 2025-06-06 17:37:54,952 | INFO | all job control threads have been joined
[2025-06-06 19:38:11] 2025-06-06 17:37:55,120 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 19:38:11] 2025-06-06 17:37:55,120 | INFO | aborting loop
[2025-06-06 19:38:11] 2025-06-06 17:37:55,144 | INFO | all data control threads have been joined
[2025-06-06 19:38:11] 2025-06-06 17:37:55,270 | INFO | [job] retrieve thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:55,270 | INFO | [job] queue monitor thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:55,373 | INFO | [payload] validate_pre thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:55,395 | INFO | [payload] execute_payloads thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:55,539 | INFO | all payload control threads have been joined
[2025-06-06 19:38:11] 2025-06-06 17:37:55,957 | INFO | [job] control thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,039 | INFO | [payload] validate_post thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,126 | INFO | [job] job monitor thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,149 | INFO | [data] control thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,298 | INFO | [data] copytool_out thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,461 | INFO | [data] copytool_in thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,492 | INFO | [payload] failed_post thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,544 | INFO | [payload] control thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,581 | INFO | [job] validate thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,581 | INFO | [job] create_data_payload thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:37:56,831 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 19:38:11] 2025-06-06 17:38:00,836 | INFO | [data] queue_monitor thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:38:04,673 | INFO | job.realtimelogging is not enabled
[2025-06-06 19:38:11] 2025-06-06 17:38:05,679 | INFO | [payload] run_realtimelog thread has finished
[2025-06-06 19:38:11] 2025-06-06 17:38:06,339 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23255238604608)>', '<ExcThread(monitor, started 23254995515136)>']
[2025-06-06 19:38:11] 2025-06-06 17:38:07,331 | WARNING | job_aborted has been set - aborting pilot monitoring
[2025-06-06 19:38:11] 2025-06-06 17:38:07,331 | INFO | [monitor] control thread has ended
[2025-06-06 19:38:11] 2025-06-06 17:38:11,365 | INFO | all workflow threads have been joined
[2025-06-06 19:38:11] 2025-06-06 17:38:11,365 | INFO | end of generic workflow (traces error code: 0)
[2025-06-06 19:38:11] 2025-06-06 17:38:11,365 | INFO | traces error code: 0
[2025-06-06 19:38:11] 2025-06-06 17:38:11,365 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 19:38:11] 2025-06-06 17:38:11,446 [wrapper] ==== pilot stdout END ====
[2025-06-06 19:38:11] 2025-06-06 17:38:11,448 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 19:38:11] 2025-06-06 17:38:11,449 [wrapper] pilotpid: 1336344
[2025-06-06 19:38:11] 2025-06-06 17:38:11,450 [wrapper] Pilot exit status: 0
[2025-06-06 19:38:11] 2025-06-06 17:38:11,456 [wrapper] pandaids: 6667365418 6667365418 6667365418 6667365418 6667365418 6667365418 6667365418 6667365418 6667365418
[2025-06-06 19:38:11] 2025-06-06 17:38:11,483 [wrapper] cleanup supervisor_pilot 1425926 1336345
[2025-06-06 19:38:11] 2025-06-06 17:38:11,484 [wrapper] Test setup, not cleaning
[2025-06-06 19:38:11] 2025-06-06 17:38:11,486 [wrapper] apfmon messages muted
[2025-06-06 19:38:11] 2025-06-06 17:38:11,487 [wrapper] ==== wrapper stdout END ====
[2025-06-06 19:38:11] 2025-06-06 17:38:11,489 [wrapper] ==== wrapper stderr END ====
[2025-06-06 19:38:11] *** Error codes and diagnostics ***
[2025-06-06 19:38:11] "exeErrorCode": 0,
[2025-06-06 19:38:11] "exeErrorDiag": "",
[2025-06-06 19:38:11] "pilotErrorCode": 0,
[2025-06-06 19:38:11] "pilotErrorDiag": "",
[2025-06-06 19:38:11] *** Listing of results directory ***
[2025-06-06 19:38:11] total 626620
[2025-06-06 19:38:11] drwx------ 4 boinc boinc 4096 Apr 3 10:00 pilot3
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 495897 May 27 18:39 pilot3.tar.gz
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 5111 May 27 19:25 queuedata.json
[2025-06-06 19:38:11] -rwx------ 1 boinc boinc 37140 May 27 19:30 runpilot2-wrapper.sh
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 100 May 30 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 19:38:11] -rwxr-xr-x 1 boinc boinc 7986 May 30 20:38 run_atlas
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 105 May 30 20:38 job.xml
[2025-06-06 19:38:11] -rw-r--r-- 3 boinc boinc 222450155 May 30 21:00 EVNT.44871834._002789.pool.root.1
[2025-06-06 19:38:11] -rw-r--r-- 3 boinc boinc 222450155 May 30 21:00 ATLAS.root_0
[2025-06-06 19:38:11] -rw-r--r-- 2 boinc boinc 15093 May 30 21:00 start_atlas.sh
[2025-06-06 19:38:11] -rw-r--r-- 2 boinc boinc 508876 May 30 21:00 input.tar.gz
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 0 May 30 21:00 boinc_lockfile
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 0 Jun 2 10:24 wrapper_sigint_64704
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 0 Jun 2 10:27 wrapper_sigkill_64704
[2025-06-06 19:38:11] drwxrwx--x 2 boinc boinc 4096 Jun 2 10:27 shared
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 0 Jun 3 08:03 wrapper_sigint_1927272
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 0 Jun 3 08:06 wrapper_sigkill_1927272
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 0 Jun 3 19:19 wrapper_sigint_3025231
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 0 Jun 6 16:05 wrapper_sigint_1190417
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 0 Jun 6 16:08 wrapper_sigkill_1190417
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 0 Jun 6 17:11 wrapper_sigint_1297249
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 2559 Jun 6 17:49 pandaJob.out
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 985740 Jun 6 17:49 agis_schedconf.cvmfs.json
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 6642 Jun 6 18:25 init_data.xml
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 99 Jun 6 19:36 pilot_heartbeat.json
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 191088293 Jun 6 19:37 HITS.44871837._071002.pool.root.1
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 531 Jun 6 19:37 boinc_task_state.xml
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 1041 Jun 6 19:37 memory_monitor_summary.json
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 1598969 Jun 6 19:37 agis_ddmendpoints.agis.ALL.json
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 261282 Jun 6 19:37 log.44871837._071002.job.log.tgz.1
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 7744 Jun 6 19:37 heartbeat.json
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 28 Jun 6 19:38 wrapper_checkpoint.txt
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 8192 Jun 6 19:38 boinc_mmap_file
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 4558 Jun 6 19:38 pilotlog.txt
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 630105 Jun 6 19:38 log.44871837._071002.job.log.1
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 357 Jun 6 19:38 output.list
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 620 Jun 6 19:38 runtime_log
[2025-06-06 19:38:11] -rw-r--r-- 2 boinc boinc 911360 Jun 6 19:38 result.tar.gz
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 9102 Jun 6 19:38 runtime_log.err
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 3105 Jun 6 19:38 Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag
[2025-06-06 19:38:11] -rw-r--r-- 1 boinc boinc 62860 Jun 6 19:38 stderr.txt
[2025-06-06 19:38:11] HITS file was successfully produced:
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 191088293 Jun 6 19:37 shared/HITS.pool.root.1
[2025-06-06 19:38:11] *** Contents of shared directory: ***
[2025-06-06 19:38:11] total 405268
[2025-06-06 19:38:11] -rw-r--r-- 3 boinc boinc 222450155 May 30 21:00 ATLAS.root_0
[2025-06-06 19:38:11] -rw-r--r-- 2 boinc boinc 15093 May 30 21:00 start_atlas.sh
[2025-06-06 19:38:11] -rw-r--r-- 2 boinc boinc 508876 May 30 21:00 input.tar.gz
[2025-06-06 19:38:11] -rw------- 1 boinc boinc 191088293 Jun 6 19:37 HITS.pool.root.1
[2025-06-06 19:38:11] -rw-r--r-- 2 boinc boinc 911360 Jun 6 19:38 result.tar.gz
19:38:13 (1332328): run_atlas exited; CPU time 25125.613949
19:38:13 (1332328): called boinc_finish(0)
</stderr_txt>
]]>
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