Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-30 13:31:16 (5680): Detected: vboxwrapper 26206
2025-05-30 13:31:16 (5680): Detected: BOINC client v7.16.20
2025-05-30 13:31:17 (5680): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-05-30 13:31:17 (5680): Successfully copied 'init_data.xml' to the shared directory.
2025-05-30 13:31:18 (5680): Create VM. (boinc_eb3b2aad791c0291, slot#2)
2025-05-30 13:31:19 (5680): Setting Memory Size for VM. (4800MB)
2025-05-30 13:31:19 (5680): Setting CPU Count for VM. (8)
2025-05-30 13:31:19 (5680): Setting Chipset Options for VM.
2025-05-30 13:31:19 (5680): Setting Graphics Controller Options for VM.
2025-05-30 13:31:20 (5680): Setting Boot Options for VM.
2025-05-30 13:31:20 (5680): Setting Network Configuration for NAT.
2025-05-30 13:31:20 (5680): Enabling VM Network Access.
2025-05-30 13:31:20 (5680): Disabling USB Support for VM.
2025-05-30 13:31:21 (5680): Disabling COM Port Support for VM.
2025-05-30 13:31:21 (5680): Disabling LPT Port Support for VM.
2025-05-30 13:31:21 (5680): Disabling Audio Support for VM.
2025-05-30 13:31:21 (5680): Disabling Clipboard Support for VM.
2025-05-30 13:31:22 (5680): Disabling Drag and Drop Support for VM.
2025-05-30 13:31:22 (5680): Adding storage controller(s) to VM.
2025-05-30 13:31:22 (5680): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-30 13:31:23 (5680): Adding VirtualBox Guest Additions to VM.
2025-05-30 13:31:24 (5680): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-30 13:31:24 (5680): forwarding host port 51083 to guest port 80
2025-05-30 13:31:24 (5680): Enabling remote desktop for VM.
2025-05-30 13:31:24 (5680): Required extension pack not installed, remote desktop not enabled.
2025-05-30 13:31:24 (5680): Enabling shared directory for VM.
2025-05-30 13:31:25 (5680): Starting VM using VBoxManage interface. (boinc_eb3b2aad791c0291, slot#2)
2025-05-30 13:31:29 (5680): Successfully started VM. (PID = '5748')
2025-05-30 13:31:29 (5680): Reporting VM Process ID to BOINC.
2025-05-30 13:31:29 (5680): Guest Log: BIOS: VirtualBox 6.0.14
2025-05-30 13:31:29 (5680): Guest Log: CPUID EDX: 0x178bfbff
2025-05-30 13:31:29 (5680): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-30 13:31:29 (5680): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-30 13:31:29 (5680): Detected: Web Application Enabled (http://localhost:51083)
2025-05-30 13:31:29 (5680): Preference change detected
2025-05-30 13:31:29 (5680): Setting CPU throttle for VM. (80%)
2025-05-30 13:31:30 (5680): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-30 13:31:31 (5680): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-30 13:31:31 (5680): Guest Log: BIOS: Booting from Hard Disk...
2025-05-30 13:31:34 (5680): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-30 13:31:34 (5680): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-30 13:31:34 (5680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-30 13:31:39 (5680): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-30 13:31:39 (5680): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-30 13:31:44 (5680): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-30 13:31:44 (5680): Guest Log: 00:00:00.000102 main     Log opened 2025-05-30T13:31:43.109283000Z
2025-05-30 13:31:44 (5680): Guest Log: 00:00:00.000179 main     OS Product: Linux
2025-05-30 13:31:44 (5680): Guest Log: 00:00:00.000207 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-30 13:31:44 (5680): Guest Log: 00:00:00.000229 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-30 13:31:44 (5680): Guest Log: 00:00:00.000249 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-30 13:31:44 (5680): Guest Log: 00:00:00.000250 main     Process ID: 1365
2025-05-30 13:31:44 (5680): Guest Log: 00:00:00.000250 main     Package type: LINUX_64BITS_GENERIC
2025-05-30 13:31:44 (5680): Guest Log: 00:00:00.000876 main     5.2.32 r132073 started. Verbose level = 0
2025-05-30 13:31:44 (5680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-30 13:31:44 (5680): Guest Log: [INFO] Mounting shared directory
2025-05-30 13:31:44 (5680): Guest Log: [INFO] Checking for init_data.xml
2025-05-30 13:31:46 (5680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-30 13:31:46 (5680): Guest Log: [INFO] Detected branch: prod
2025-05-30 13:31:46 (5680): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-30 13:31:46 (5680): Guest Log: Copying input files
2025-05-30 13:31:48 (5680): Guest Log: Copied input files into RunAtlas.
2025-05-30 13:31:48 (5680): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-30 13:31:48 (5680): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-30 13:31:48 (5680): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-30 13:31:48 (5680): Guest Log: Further information can be found at the LHC@home message board.
2025-05-30 13:31:54 (5680): Guest Log: 00:00:10.015706 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 603 602 000ns (GuestNow=1 748 604 714 507 625 000 ns GuestLast=1 748 611 903 111 227 000 ns fSetTimeLastLoop=true )
2025-05-30 13:31:56 (5680): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-30 13:31:56 (5680): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-30 13:31:56 (5680): Guest Log: 2.6.3.0 1640 0 30128 146598 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-30 13:31:56 (5680): Guest Log: copied the webapp to /var/www
2025-05-30 13:31:56 (5680): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-30 13:31:56 (5680): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-30 13:31:57 (5680): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-30 13:31:57 (5680): Guest Log:  *** Starting ATLAS job. (PandaID=6667435325 taskID=44871837) ***
2025-05-30 15:11:34 (5680): Status Report: Elapsed Time: '6000.000000'
2025-05-30 15:11:34 (5680): Status Report: CPU Time: '39721.296875'
2025-05-30 16:04:05 (5680): Guest Log:  *** Job finished ***
2025-05-30 16:04:05 (5680): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:03:53,981 | INFO     | [data] queue_monitor thread has finished
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:03:57,612 | INFO     | job.realtimelogging is not enabled
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:03:58,614 | INFO     | [payload] run_realtimelog thread has finished
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:03:58,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029176588096)>', '<ExcThread(monitor, started 140028072158976)>']
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:03:59,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:03:59,491 | INFO     | [monitor] control thread has ended
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:03,812 | INFO     | all workflow threads have been joined
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:03,812 | INFO     | end of generic workflow (traces error code: 0)
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:03,813 | INFO     | traces error code: 0
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:03,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:03,895 [wrapper] ==== pilot stdout END ====
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:03,899 [wrapper] ==== wrapper stdout RESUME ====
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:03,903 [wrapper] pilotpid: 5990
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:03,907 [wrapper] Pilot exit status: 0
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:03,971 [wrapper] pandaids: 6667435325
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:04,004 [wrapper] cleanup supervisor_pilot  6704 5991
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:04,008 [wrapper] Test setup, not cleaning
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:04,012 [wrapper] apfmon messages muted
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:04,016 [wrapper] ==== wrapper stdout END ====
2025-05-30 16:04:05 (5680): Guest Log: 2025-05-30 14:04:04,020 [wrapper] ==== wrapper stderr END ====
2025-05-30 16:04:05 (5680): Guest Log:  *** Error codes and diagnostics ***
2025-05-30 16:04:05 (5680): Guest Log:     "exeErrorCode": 0,
2025-05-30 16:04:05 (5680): Guest Log:     "exeErrorDiag": "",
2025-05-30 16:04:05 (5680): Guest Log:     "pilotErrorCode": 0,
2025-05-30 16:04:05 (5680): Guest Log:     "pilotErrorDiag": "",
2025-05-30 16:04:05 (5680): Guest Log:  *** Listing of results directory ***
2025-05-30 16:04:05 (5680): Guest Log: total 200456
2025-05-30 16:04:05 (5680): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 18:37 pilot3.tar.gz
2025-05-30 16:04:05 (5680): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 19:25 queuedata.json
2025-05-30 16:04:05 (5680): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 19:26 runpilot2-wrapper.sh
2025-05-30 16:04:05 (5680): Guest Log: -rwxr-xr-x. 1 atlas atlas      9079 May 30 11:31 init_data.xml
2025-05-30 16:04:05 (5680): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 May 30 11:31 input.tar.gz
2025-05-30 16:04:05 (5680): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 30 11:31 start_atlas.sh
2025-05-30 16:04:05 (5680): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 30 11:31 EVNT.44871834._002837.pool.root.1 -> /data/./ATLAS.root_0
2025-05-30 16:04:05 (5680): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 30 11:31 pandaJob.out
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas    988014 May 30 11:32 agis_schedconf.cvmfs.json
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas   1603667 May 30 11:32 agis_ddmendpoints.agis.ALL.json
2025-05-30 16:04:05 (5680): Guest Log: drwx------. 4 atlas atlas      4096 May 30 11:32 pilot3
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas 199243272 May 30 14:03 HITS.44871837._072282.pool.root.1
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas      1026 May 30 14:03 memory_monitor_summary.json
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas    352458 May 30 14:03 log.44871837._072282.job.log.tgz.1
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas        95 May 30 14:03 pilot_heartbeat.json
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas      7707 May 30 14:03 heartbeat.json
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas      4608 May 30 14:04 pilotlog.txt
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas    771366 May 30 14:04 log.44871837._072282.job.log.1
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas       357 May 30 14:04 output.list
2025-05-30 16:04:05 (5680): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 30 14:04 runtime_log
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas   1146880 May 30 14:04 result.tar.gz
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas       666 May 30 14:04 sTiNDmn7Ee7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFDaKDm2CyuXo.diag
2025-05-30 16:04:05 (5680): Guest Log: -rw-r--r--. 1 atlas atlas      8631 May 30 14:04 runtime_log.err
2025-05-30 16:04:05 (5680): Guest Log: Looking for outputfile HITS.44871837._072282.pool.root.1
2025-05-30 16:04:05 (5680): Guest Log: HITS file was successfully produced
2025-05-30 16:04:05 (5680): Guest Log: -rw-------. 1 atlas atlas 199243272 May 30 14:03 /home/atlas/RunAtlas/HITS.44871837._072282.pool.root.1
2025-05-30 16:04:05 (5680): Guest Log: Successfully finished the ATLAS job!
2025-05-30 16:04:05 (5680): Guest Log: Copying the results back to the shared directory!
2025-05-30 16:04:06 (5680): Guest Log:  *** Contents of shared directory: ***
2025-05-30 16:04:06 (5680): Guest Log: total 414132
2025-05-30 16:04:06 (5680): Guest Log: -rwxrwxrwx. 1 root root 223137145 May 30 11:31 ATLAS.root_0
2025-05-30 16:04:06 (5680): Guest Log: -rwxrwxrwx. 1 root root 199243272 May 30  2025 HITS.pool.root.1
2025-05-30 16:04:06 (5680): Guest Log: -rwxrwxrwx. 1 root root      9079 May 30 11:31 init_data.xml
2025-05-30 16:04:06 (5680): Guest Log: -rwxrwxrwx. 1 root root    508877 May 28 01:21 input.tar.gz
2025-05-30 16:04:06 (5680): Guest Log: -rwxrwxrwx. 1 root root   1146880 May 30  2025 result.tar.gz
2025-05-30 16:04:06 (5680): Guest Log: -rwxrwxrwx. 1 root root     15093 May 28 01:21 start_atlas.sh
2025-05-30 16:04:06 (5680): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-30 16:04:06 (5680): VM Completion File Detected.
2025-05-30 16:04:06 (5680): Powering off VM.
2025-05-30 16:04:06 (5680): Successfully stopped VM.
2025-05-30 16:04:06 (5680): Deregistering VM. (boinc_eb3b2aad791c0291, slot#2)
2025-05-30 16:04:06 (5680): Removing network bandwidth throttle group from VM.
2025-05-30 16:04:07 (5680): Removing VM from VirtualBox.
16:04:12 (5680): called boinc_finish(0)

</stderr_txt>
]]>

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