Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:35:40 (32516): wrapper (7.7.26015): starting
13:35:40 (32516): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 13:35:40] Arguments: --nthreads 8
[2025-05-28 13:35:40] Threads: 8
[2025-05-28 13:35:40] Checking for CVMFS
[2025-05-28 13:35:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 13:35:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 13:35:40] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 13:35:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 13:35:40] 2.11.2.0 1304 23072 90560 146515 0 69 12797098 25165824 4093 130560 0 13414340 99.803 14575144 1806 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 13:35:40] CVMFS is ok
[2025-05-28 13:35:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 13:35:40] Checking for apptainer binary...
[2025-05-28 13:35:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 13:35:40] Running /usr/bin/apptainer --version
[2025-05-28 13:35:40] apptainer version 1.3.2-1.el7
[2025-05-28 13:35:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 13:35:42] cg-vwn245.simple-grid.lan
[2025-05-28 13:35:42] apptainer works
[2025-05-28 13:35:42] Set ATHENA_PROC_NUMBER=8
[2025-05-28 13:35:42] Set ATHENA_CORE_NUMBER=8
[2025-05-28 13:35:42] Starting ATLAS job with PandaID=6667435773
[2025-05-28 13:35:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 18:35:33]  *** The last 200 lines of the pilot log: ***
[2025-05-28 18:35:33] 2025-05-28 16:35:19,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 18:35:33] 2025-05-28 16:35:19,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 18:35:33] 2025-05-28 16:35:19,250 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 18:35:33] 2025-05-28 16:35:19,257 | INFO     | fitting pss+swap vs Time
[2025-05-28 18:35:33] 2025-05-28 16:35:19,258 | INFO     | sum of square deviations: 7879803557.5
[2025-05-28 18:35:33] 2025-05-28 16:35:19,261 | INFO     | sum of deviations: -27923764704.5
[2025-05-28 18:35:33] 2025-05-28 16:35:19,261 | INFO     | mean x: 1748441145.5
[2025-05-28 18:35:33] 2025-05-28 16:35:19,261 | INFO     | mean y: 2504107.4727891157
[2025-05-28 18:35:33] 2025-05-28 16:35:19,261 | INFO     | -- intersect: 6198478257.125116
[2025-05-28 18:35:33] 2025-05-28 16:35:19,261 | INFO     | intersect: 6198478257.125116
[2025-05-28 18:35:33] 2025-05-28 16:35:19,262 | INFO     | chi2: 2.483930212142451
[2025-05-28 18:35:33] 2025-05-28 16:35:19,263 | INFO     | sum of square deviations: 7484568240.0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,266 | INFO     | sum of deviations: -8222662994.000012
[2025-05-28 18:35:33] 2025-05-28 16:35:19,266 | INFO     | mean x: 1748440993.0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,266 | INFO     | mean y: 2511604.84083045
[2025-05-28 18:35:33] 2025-05-28 16:35:19,266 | INFO     | -- intersect: 1923376054.1084793
[2025-05-28 18:35:33] 2025-05-28 16:35:19,266 | INFO     | intersect: 1923376054.1084793
[2025-05-28 18:35:33] 2025-05-28 16:35:19,267 | INFO     | chi2: 1.709746989811962
[2025-05-28 18:35:33] 2025-05-28 16:35:19,267 | INFO     | current chi2=1.709746989811962 (change=31.167672044325954 %)
[2025-05-28 18:35:33] 2025-05-28 16:35:19,268 | INFO     | sum of square deviations: 7102775035.0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,271 | INFO     | sum of deviations: -8411132924.999997
[2025-05-28 18:35:33] 2025-05-28 16:35:19,271 | INFO     | mean x: 1748440840.5
[2025-05-28 18:35:33] 2025-05-28 16:35:19,271 | INFO     | mean y: 2511529.563380282
[2025-05-28 18:35:33] 2025-05-28 16:35:19,271 | INFO     | -- intersect: 2073021752.4658883
[2025-05-28 18:35:33] 2025-05-28 16:35:19,271 | INFO     | intersect: 2073021752.4658883
[2025-05-28 18:35:33] 2025-05-28 16:35:19,272 | INFO     | chi2: 1.7089460864634878
[2025-05-28 18:35:33] 2025-05-28 16:35:19,272 | INFO     | current chi2=1.7089460864634878 (change=0.04684338403556665 %)
[2025-05-28 18:35:33] 2025-05-28 16:35:19,272 | INFO     | right removable region: 283
[2025-05-28 18:35:33] 2025-05-28 16:35:19,273 | INFO     | sum of square deviations: 7484568240.0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,276 | INFO     | sum of deviations: -73290408283.0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,276 | INFO     | mean x: 1748441298.0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,276 | INFO     | mean y: 2521478.948096886
[2025-05-28 18:35:33] 2025-05-28 16:35:19,276 | INFO     | -- intersect: 17123612833.882214
[2025-05-28 18:35:33] 2025-05-28 16:35:19,276 | INFO     | intersect: 17123612833.882214
[2025-05-28 18:35:33] 2025-05-28 16:35:19,277 | INFO     | chi2: 1.021965692871739
[2025-05-28 18:35:33] 2025-05-28 16:35:19,277 | INFO     | current chi2=1.021965692871739 (change=58.85690798091028 %)
[2025-05-28 18:35:33] 2025-05-28 16:35:19,277 | INFO     | sum of square deviations: 7102775035.0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,280 | INFO     | sum of deviations: -70470861982.49997
[2025-05-28 18:35:33] 2025-05-28 16:35:19,280 | INFO     | mean x: 1748441450.5
[2025-05-28 18:35:33] 2025-05-28 16:35:19,280 | INFO     | mean y: 2520331.341549296
[2025-05-28 18:35:33] 2025-05-28 16:35:19,281 | INFO     | -- intersect: 17349849443.626682
[2025-05-28 18:35:33] 2025-05-28 16:35:19,281 | INFO     | intersect: 17349849443.626682
[2025-05-28 18:35:33] 2025-05-28 16:35:19,281 | INFO     | chi2: 1.0077696031967174
[2025-05-28 18:35:33] 2025-05-28 16:35:19,281 | INFO     | current chi2=1.0077696031967174 (change=1.3890965004050675 %)
[2025-05-28 18:35:33] 2025-05-28 16:35:19,281 | INFO     | left removable region: 20
[2025-05-28 18:35:33] 2025-05-28 16:35:19,282 | INFO     | sum of square deviations: 5640782972.0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,284 | INFO     | sum of deviations: -32467382918.999992
[2025-05-28 18:35:33] 2025-05-28 16:35:19,285 | INFO     | mean x: 1748441420.0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,285 | INFO     | mean y: 2520610.4600760457
[2025-05-28 18:35:33] 2025-05-28 16:35:19,285 | INFO     | -- intersect: 10066250659.349482
[2025-05-28 18:35:33] 2025-05-28 16:35:19,285 | INFO     | intersect: 10066250659.349482
[2025-05-28 18:35:33] 2025-05-28 16:35:19,285 | INFO     | chi2: 0.17680134641247847
[2025-05-28 18:35:33] 2025-05-28 16:35:19,286 | INFO     | -- intersect: 10066250659.349482
[2025-05-28 18:35:33] 2025-05-28 16:35:19,286 | INFO     | current memory leak: -5.76 B/s (using 263 data points, chi2=0.18)
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | ..............................
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | . Timing measurements:
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | . get job = 0 s
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | . initial setup = 2 s
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | . payload setup = 13 s
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | . stage-in = 0 s
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | . payload execution = 17914 s
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | . stage-out = 1 s
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | . log creation = 0 s
[2025-05-28 18:35:33] 2025-05-28 16:35:19,287 | INFO     | ..............................
[2025-05-28 18:35:33] 2025-05-28 16:35:19,580 | INFO     | 
[2025-05-28 18:35:33] 2025-05-28 16:35:19,580 | INFO     | job summary report
[2025-05-28 18:35:33] 2025-05-28 16:35:19,580 | INFO     | --------------------------------------------------
[2025-05-28 18:35:33] 2025-05-28 16:35:19,580 | INFO     | PanDA job id: 6667435773
[2025-05-28 18:35:33] 2025-05-28 16:35:19,580 | INFO     | task id: 44871837
[2025-05-28 18:35:33] 2025-05-28 16:35:19,580 | INFO     | errors: (none)
[2025-05-28 18:35:33] 2025-05-28 16:35:19,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | pilot state: finished 
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | transexitcode: 0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | exeerrorcode: 0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | exeerrordiag: 
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | exitcode: 0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | exitmsg: OK
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | cpuconsumptiontime: 69673 s
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | nevents: 400
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | neventsw: 0
[2025-05-28 18:35:33] 2025-05-28 16:35:19,581 | INFO     | pid: 10331
[2025-05-28 18:35:33] 2025-05-28 16:35:19,582 | INFO     | pgrp: 10331
[2025-05-28 18:35:33] 2025-05-28 16:35:19,582 | INFO     | corecount: 8
[2025-05-28 18:35:33] 2025-05-28 16:35:19,582 | INFO     | event service: False
[2025-05-28 18:35:33] 2025-05-28 16:35:19,582 | INFO     | sizes: {0: 2405064, 1: 2405263, 2: 2405263, 8: 2405497, 12: 2405525, 17931: 2437253, 17933: 2446196, 17935: 2446252, 17943: 2446422}
[2025-05-28 18:35:33] 2025-05-28 16:35:19,582 | INFO     | --------------------------------------------------
[2025-05-28 18:35:33] 2025-05-28 16:35:19,582 | INFO     | 
[2025-05-28 18:35:33] 2025-05-28 16:35:19,582 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-05-28 18:35:33] 2025-05-28 16:35:19,680 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,680 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,681 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,681 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,681 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 18:35:33] 2025-05-28 16:35:19,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 18:35:33] 2025-05-28 16:35:19,683 | INFO     | job 6667435773 has completed (purged errors)
[2025-05-28 18:35:33] 2025-05-28 16:35:19,683 | INFO     | overall cleanup function is called
[2025-05-28 18:35:33] 2025-05-28 16:35:20,692 | INFO     | --- collectZombieJob: --- 10, [10331]
[2025-05-28 18:35:33] 2025-05-28 16:35:20,692 | INFO     | zombie collector waiting for pid 10331
[2025-05-28 18:35:33] 2025-05-28 16:35:20,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 18:35:33] 2025-05-28 16:35:20,692 | INFO     | collected zombie processes
[2025-05-28 18:35:33] 2025-05-28 16:35:20,692 | INFO     | will attempt to kill all subprocesses of pid=10331
[2025-05-28 18:35:33] 2025-05-28 16:35:20,787 | INFO     | process IDs to be killed: [10331] (in reverse order)
[2025-05-28 18:35:33] 2025-05-28 16:35:20,856 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 18:35:33] 2025-05-28 16:35:20,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 18:35:33] 2025-05-28 16:35:20,860 | INFO     | did not find any defunct processes belonging to 10331
[2025-05-28 18:35:33] 2025-05-28 16:35:20,863 | INFO     | did not find any defunct processes belonging to 10331
[2025-05-28 18:35:33] 2025-05-28 16:35:20,863 | INFO     | ready for new job
[2025-05-28 18:35:33] 2025-05-28 16:35:20,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 18:35:33] 2025-05-28 16:35:20,866 | INFO     | **************************************
[2025-05-28 18:35:33] 2025-05-28 16:35:20,866 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 18:35:33] 2025-05-28 16:35:20,866 | INFO     | **************************************
[2025-05-28 18:35:33] 2025-05-28 16:35:20,866 | INFO     | 
[2025-05-28 18:35:33] 2025-05-28 16:35:20,867 | INFO     | pilot is running in a VM
[2025-05-28 18:35:33] 2025-05-28 16:35:20,867 | INFO     | architecture information:
[2025-05-28 18:35:33] 2025-05-28 16:35:20,867 | INFO     | executing command: cat /etc/os-release
[2025-05-28 18:35:33] 2025-05-28 16:35:20,894 | INFO     | cat /etc/os-release:
[2025-05-28 18:35:33] NAME="CentOS Linux"
[2025-05-28 18:35:33] VERSION="7 (Core)"
[2025-05-28 18:35:33] ID="centos"
[2025-05-28 18:35:33] ID_LIKE="rhel fedora"
[2025-05-28 18:35:33] VERSION_ID="7"
[2025-05-28 18:35:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 18:35:33] ANSI_COLOR="0;31"
[2025-05-28 18:35:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 18:35:33] HOME_URL="https://www.centos.org/"
[2025-05-28 18:35:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 18:35:33] 
[2025-05-28 18:35:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 18:35:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 18:35:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 18:35:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 18:35:33] 
[2025-05-28 18:35:33] 2025-05-28 16:35:20,895 | INFO     | **************************************
[2025-05-28 18:35:33] 2025-05-28 16:35:21,397 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-05-28 18:35:33] 2025-05-28 16:35:21,463 | INFO     | sufficient remaining disk space (495410216960 B)
[2025-05-28 18:35:33] 2025-05-28 16:35:21,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 18:35:33] 2025-05-28 16:35:21,464 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 18:35:33] 2025-05-28 16:35:21,464 | INFO     | update_server=False
[2025-05-28 18:35:33] 2025-05-28 16:35:21,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 18:35:33] 2025-05-28 16:35:21,464 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 18:35:33] 2025-05-28 16:35:21,465 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 18:35:33] 2025-05-28 16:35:21,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 18:35:33] 2025-05-28 16:35:21,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 18:35:33] 2025-05-28 16:35:21,844 | INFO     | all payload control threads have been joined
[2025-05-28 18:35:33] 2025-05-28 16:35:21,871 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 18:35:33] 2025-05-28 16:35:21,871 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 18:35:33] 2025-05-28 16:35:21,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 18:35:33] 2025-05-28 16:35:21,871 | INFO     | will abort loop
[2025-05-28 18:35:33] 2025-05-28 16:35:22,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 18:35:33] 2025-05-28 16:35:22,469 | INFO     | [job] retrieve thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:22,471 | INFO     | all job control threads have been joined
[2025-05-28 18:35:33] 2025-05-28 16:35:22,484 | INFO     | all data control threads have been joined
[2025-05-28 18:35:33] 2025-05-28 16:35:22,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 18:35:33] 2025-05-28 16:35:22,850 | INFO     | [payload] control thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:22,875 | INFO     | [job] job monitor thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:22,947 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:23,017 | INFO     | [payload] validate_post thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:23,034 | INFO     | [payload] failed_post thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:23,162 | INFO     | [data] copytool_in thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:23,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:23,419 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:23,475 | INFO     | [job] control thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:23,489 | INFO     | [data] control thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:23,493 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:23,606 | INFO     | [job] validate thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:24,433 | INFO     | [data] copytool_out thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:24,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 18:35:33] 2025-05-28 16:35:25,458 | INFO     | [job] queue monitor thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:26,556 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 18:35:33] 2025-05-28 16:35:27,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140290147202880)>', '<ExcThread(monitor, started 140289335359232)>']
[2025-05-28 18:35:33] 2025-05-28 16:35:28,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 18:35:33] 2025-05-28 16:35:28,500 | INFO     | [monitor] control thread has ended
[2025-05-28 18:35:33] 2025-05-28 16:35:32,781 | INFO     | all workflow threads have been joined
[2025-05-28 18:35:33] 2025-05-28 16:35:32,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 18:35:33] 2025-05-28 16:35:32,781 | INFO     | traces error code: 0
[2025-05-28 18:35:33] 2025-05-28 16:35:32,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 18:35:33] 2025-05-28 16:35:32,955 [wrapper] ==== pilot stdout END ====
[2025-05-28 18:35:33] 2025-05-28 16:35:32,962 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 18:35:33] 2025-05-28 16:35:32,965 [wrapper] pilotpid: 3792
[2025-05-28 18:35:33] 2025-05-28 16:35:32,969 [wrapper] Pilot exit status: 0
[2025-05-28 18:35:33] 2025-05-28 16:35:33,002 [wrapper] pandaids: 6667435773
[2025-05-28 18:35:33] 2025-05-28 16:35:33,047 [wrapper] cleanup supervisor_pilot  9045 3793
[2025-05-28 18:35:33] 2025-05-28 16:35:33,051 [wrapper] Test setup, not cleaning
[2025-05-28 18:35:33] 2025-05-28 16:35:33,054 [wrapper] apfmon messages muted
[2025-05-28 18:35:33] 2025-05-28 16:35:33,058 [wrapper] ==== wrapper stdout END ====
[2025-05-28 18:35:33] 2025-05-28 16:35:33,061 [wrapper] ==== wrapper stderr END ====
[2025-05-28 18:35:33]  *** Error codes and diagnostics ***
[2025-05-28 18:35:33]     "exeErrorCode": 0,
[2025-05-28 18:35:33]     "exeErrorDiag": "",
[2025-05-28 18:35:33]     "pilotErrorCode": 0,
[2025-05-28 18:35:33]     "pilotErrorDiag": "",
[2025-05-28 18:35:33]  *** Listing of results directory ***
[2025-05-28 18:35:33] total 412220
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc      5111 May 27 21:30 queuedata.json
[2025-05-28 18:35:33] -rwx------. 1 boinc boinc     37140 May 27 21:34 runpilot2-wrapper.sh
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc    495897 May 27 21:34 pilot3.tar.gz
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc       100 May 28 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 18:35:33] -rwxr-xr-x. 1 boinc boinc      7986 May 28 13:35 run_atlas
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc       105 May 28 13:35 job.xml
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc      6373 May 28 13:35 init_data.xml
[2025-05-28 18:35:33] -rw-r--r--. 2 boinc boinc 222434679 May 28 13:35 EVNT.44871834._002843.pool.root.1
[2025-05-28 18:35:33] -rw-r--r--. 2 boinc boinc     15093 May 28 13:35 start_atlas.sh
[2025-05-28 18:35:33] drwxrwx--x. 2 boinc boinc        68 May 28 13:35 shared
[2025-05-28 18:35:33] -rw-r--r--. 2 boinc boinc    508880 May 28 13:35 input.tar.gz
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc         0 May 28 13:35 boinc_lockfile
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc      2559 May 28 13:35 pandaJob.out
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc    990995 May 28 13:35 agis_schedconf.cvmfs.json
[2025-05-28 18:35:33] drwx------. 4 boinc boinc      4096 May 28 13:35 pilot3
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc        95 May 28 18:34 pilot_heartbeat.json
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc 191917591 May 28 18:34 HITS.44871837._072432.pool.root.1
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc       531 May 28 18:34 boinc_task_state.xml
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc      1033 May 28 18:35 memory_monitor_summary.json
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc   1603667 May 28 18:35 agis_ddmendpoints.agis.ALL.json
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc    435147 May 28 18:35 log.44871837._072432.job.log.tgz.1
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc      7689 May 28 18:35 heartbeat.json
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc        28 May 28 18:35 wrapper_checkpoint.txt
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc      8192 May 28 18:35 boinc_mmap_file
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc      4726 May 28 18:35 pilotlog.txt
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc   1533708 May 28 18:35 log.44871837._072432.job.log.1
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc       357 May 28 18:35 output.list
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc       620 May 28 18:35 runtime_log
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc   1986560 May 28 18:35 result.tar.gz
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc      8673 May 28 18:35 runtime_log.err
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc       657 May 28 18:35 lnCMDmNFFe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOEaKDmfxyYQn.diag
[2025-05-28 18:35:33] -rw-r--r--. 1 boinc boinc     20505 May 28 18:35 stderr.txt
[2025-05-28 18:35:33] HITS file was successfully produced:
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc 191917591 May 28 18:34 shared/HITS.pool.root.1
[2025-05-28 18:35:33]  *** Contents of shared directory: ***
[2025-05-28 18:35:33] total 407100
[2025-05-28 18:35:33] -rw-r--r--. 2 boinc boinc 222434679 May 28 13:35 ATLAS.root_0
[2025-05-28 18:35:33] -rw-r--r--. 2 boinc boinc     15093 May 28 13:35 start_atlas.sh
[2025-05-28 18:35:33] -rw-r--r--. 2 boinc boinc    508880 May 28 13:35 input.tar.gz
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc 191917591 May 28 18:34 HITS.pool.root.1
[2025-05-28 18:35:33] -rw-------. 1 boinc boinc   1986560 May 28 18:35 result.tar.gz
18:35:35 (32516): run_atlas exited; CPU time 69889.457761
18:35:35 (32516): called boinc_finish(0)

</stderr_txt>
]]>

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