Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:02:36 (1273697): wrapper (7.7.26015): starting
23:02:36 (1273697): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 23:02:36] Arguments: --nthreads 4
[2025-06-03 23:02:36] Threads: 4
[2025-06-03 23:02:36] Checking for CVMFS
[2025-06-03 23:02:36] No cvmfs_config command found, will try listing directly
[2025-06-03 23:02:36] CVMFS is ok
[2025-06-03 23:02:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:02:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:02:36] Further information can be found at the LHC@home message board.
[2025-06-03 23:02:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:02:36] Checking for apptainer binary...
[2025-06-03 23:02:36] which: no apptainer in ((null))
[2025-06-03 23:02:36] apptainer is not installed, using version from CVMFS
[2025-06-03 23:02:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:02:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-06-03 23:02:37] apptainer works
[2025-06-03 23:02:37] Set ATHENA_PROC_NUMBER=4
[2025-06-03 23:02:37] Set ATHENA_CORE_NUMBER=4
[2025-06-03 23:02:37] Starting ATLAS job with PandaID=6667435385
[2025-06-03 23:02:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:43:57]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:43:57] 2025-06-04 01:33:22,829 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4748/.job.ad'
[2025-06-04 03:43:57] 2025-06-04 01:33:22,829 | INFO     | total number of processed events: 400 (read)
[2025-06-04 03:43:57] 2025-06-04 01:33:22,832 | INFO     | executing command: lscpu
[2025-06-04 03:43:57] 2025-06-04 01:33:22,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:43:57] 2025-06-04 01:33:24,508 | INFO     | monitor loop #1184: job 0:6667435385 is in state 'finished'
[2025-06-04 03:43:57] 2025-06-04 01:33:24,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:43:57] 2025-06-04 01:33:26,492 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 03:43:57] 2025-06-04 01:33:26,492 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6667435385/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:43:57] 2025-06-04 01:33:26,493 | INFO     | extracted standard info from prmon json
[2025-06-04 03:43:57] 2025-06-04 01:33:26,493 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:43:57] 2025-06-04 01:33:26,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:43:57] 2025-06-04 01:33:26,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:43:57] 2025-06-04 01:33:26,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:43:57] 2025-06-04 01:33:26,500 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:43:57] 2025-06-04 01:33:26,501 | INFO     | sum of square deviations: 5836025702.5
[2025-06-04 03:43:57] 2025-06-04 01:33:26,503 | INFO     | sum of deviations: -11038195952.000002
[2025-06-04 03:43:57] 2025-06-04 01:33:26,503 | INFO     | mean x: 1748992676.5
[2025-06-04 03:43:57] 2025-06-04 01:33:26,503 | INFO     | mean y: 2356144.5037593986
[2025-06-04 03:43:57] 2025-06-04 01:33:26,503 | INFO     | -- intersect: 3310381993.935828
[2025-06-04 03:43:57] 2025-06-04 01:33:26,504 | INFO     | intersect: 3310381993.935828
[2025-06-04 03:43:57] 2025-06-04 01:33:26,504 | INFO     | chi2: 1.6366691280777865
[2025-06-04 03:43:57] 2025-06-04 01:33:26,505 | INFO     | sum of square deviations: 5513070810.0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,507 | INFO     | sum of deviations: -10836430766.000011
[2025-06-04 03:43:57] 2025-06-04 01:33:26,507 | INFO     | mean x: 1748992524.0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,507 | INFO     | mean y: 2356239.7816091953
[2025-06-04 03:43:57] 2025-06-04 01:33:26,507 | INFO     | -- intersect: 3440156523.8265033
[2025-06-04 03:43:57] 2025-06-04 01:33:26,507 | INFO     | intersect: 3440156523.8265033
[2025-06-04 03:43:57] 2025-06-04 01:33:26,508 | INFO     | chi2: 1.636041853025686
[2025-06-04 03:43:57] 2025-06-04 01:33:26,508 | INFO     | current chi2=1.636041853025686 (change=0.038326320289141035 %)
[2025-06-04 03:43:57] 2025-06-04 01:33:26,508 | INFO     | right removable region: 260
[2025-06-04 03:43:57] 2025-06-04 01:33:26,509 | INFO     | sum of square deviations: 5513070810.0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,511 | INFO     | sum of deviations: -48931224603.0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,511 | INFO     | mean x: 1748992829.0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,511 | INFO     | mean y: 2373879.9118773947
[2025-06-04 03:43:57] 2025-06-04 01:33:26,511 | INFO     | -- intersect: 15525548512.38778
[2025-06-04 03:43:57] 2025-06-04 01:33:26,511 | INFO     | intersect: 15525548512.38778
[2025-06-04 03:43:57] 2025-06-04 01:33:26,512 | INFO     | chi2: 0.18192012302035712
[2025-06-04 03:43:57] 2025-06-04 01:33:26,512 | INFO     | current chi2=0.18192012302035712 (change=88.88473425083687 %)
[2025-06-04 03:43:57] 2025-06-04 01:33:26,513 | INFO     | sum of square deviations: 5202255680.0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,514 | INFO     | sum of deviations: -39392429208.0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,515 | INFO     | mean x: 1748992981.5
[2025-06-04 03:43:57] 2025-06-04 01:33:26,515 | INFO     | mean y: 2369186.8125
[2025-06-04 03:43:57] 2025-06-04 01:33:26,515 | INFO     | -- intersect: 13246063162.466463
[2025-06-04 03:43:57] 2025-06-04 01:33:26,515 | INFO     | intersect: 13246063162.466463
[2025-06-04 03:43:57] 2025-06-04 01:33:26,516 | INFO     | chi2: 0.15243440673541528
[2025-06-04 03:43:57] 2025-06-04 01:33:26,516 | INFO     | current chi2=0.15243440673541528 (change=16.20805647852511 %)
[2025-06-04 03:43:57] 2025-06-04 01:33:26,516 | INFO     | left removable region: 20
[2025-06-04 03:43:57] 2025-06-04 01:33:26,516 | INFO     | sum of square deviations: 4286517580.0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,518 | INFO     | sum of deviations: -17048873102.999998
[2025-06-04 03:43:57] 2025-06-04 01:33:26,518 | INFO     | mean x: 1748993103.5
[2025-06-04 03:43:57] 2025-06-04 01:33:26,519 | INFO     | mean y: 2357944.7583333333
[2025-06-04 03:43:57] 2025-06-04 01:33:26,519 | INFO     | -- intersect: 6958671764.33064
[2025-06-04 03:43:57] 2025-06-04 01:33:26,519 | INFO     | intersect: 6958671764.33064
[2025-06-04 03:43:57] 2025-06-04 01:33:26,519 | INFO     | chi2: 0.030842189798048338
[2025-06-04 03:43:57] 2025-06-04 01:33:26,520 | INFO     | -- intersect: 6958671764.33064
[2025-06-04 03:43:57] 2025-06-04 01:33:26,520 | INFO     | current memory leak: -3.98 B/s (using 240 data points, chi2=0.03)
[2025-06-04 03:43:57] 2025-06-04 01:33:26,521 | INFO     | ..............................
[2025-06-04 03:43:57] 2025-06-04 01:33:26,521 | INFO     | . Timing measurements:
[2025-06-04 03:43:57] 2025-06-04 01:33:26,521 | INFO     | . get job = 0 s
[2025-06-04 03:43:57] 2025-06-04 01:33:26,521 | INFO     | . initial setup = 1 s
[2025-06-04 03:43:57] 2025-06-04 01:33:26,521 | INFO     | . payload setup = 7 s
[2025-06-04 03:43:57] 2025-06-04 01:33:26,521 | INFO     | . stage-in = 0 s
[2025-06-04 03:43:57] 2025-06-04 01:33:26,521 | INFO     | . payload execution = 16203 s
[2025-06-04 03:43:57] 2025-06-04 01:33:26,522 | INFO     | . stage-out = 1 s
[2025-06-04 03:43:57] 2025-06-04 01:33:26,522 | INFO     | . log creation = 0 s
[2025-06-04 03:43:57] 2025-06-04 01:33:26,522 | INFO     | ..............................
[2025-06-04 03:43:57] 2025-06-04 01:33:26,640 | INFO     | 
[2025-06-04 03:43:57] 2025-06-04 01:33:26,640 | INFO     | job summary report
[2025-06-04 03:43:57] 2025-06-04 01:33:26,640 | INFO     | --------------------------------------------------
[2025-06-04 03:43:57] 2025-06-04 01:33:26,641 | INFO     | PanDA job id: 6667435385
[2025-06-04 03:43:57] 2025-06-04 01:33:26,641 | INFO     | task id: 44871837
[2025-06-04 03:43:57] 2025-06-04 01:33:26,641 | INFO     | errors: (none)
[2025-06-04 03:43:57] 2025-06-04 01:33:26,641 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:43:57] 2025-06-04 01:33:26,641 | INFO     | pilot state: finished 
[2025-06-04 03:43:57] 2025-06-04 01:33:26,641 | INFO     | transexitcode: 0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,641 | INFO     | exeerrorcode: 0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,641 | INFO     | exeerrordiag: 
[2025-06-04 03:43:57] 2025-06-04 01:33:26,642 | INFO     | exitcode: 0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,642 | INFO     | exitmsg: OK
[2025-06-04 03:43:57] 2025-06-04 01:33:26,642 | INFO     | cpuconsumptiontime: 62521 s
[2025-06-04 03:43:57] 2025-06-04 01:33:26,642 | INFO     | nevents: 400
[2025-06-04 03:43:57] 2025-06-04 01:33:26,642 | INFO     | neventsw: 0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,642 | INFO     | pid: 1284188
[2025-06-04 03:43:57] 2025-06-04 01:33:26,642 | INFO     | pgrp: 1284188
[2025-06-04 03:43:57] 2025-06-04 01:33:26,642 | INFO     | corecount: 4
[2025-06-04 03:43:57] 2025-06-04 01:33:26,642 | INFO     | event service: False
[2025-06-04 03:43:57] 2025-06-04 01:33:26,643 | INFO     | sizes: {0: 2404355, 1: 2405222, 5: 2405428, 12: 2405484, 16214: 2436487, 16216: 2445450, 16218: 2445634, 16225: 2445804}
[2025-06-04 03:43:57] 2025-06-04 01:33:26,643 | INFO     | --------------------------------------------------
[2025-06-04 03:43:57] 2025-06-04 01:33:26,643 | INFO     | 
[2025-06-04 03:43:57] 2025-06-04 01:33:26,643 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-04 03:43:57] 2025-06-04 01:33:26,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,661 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,661 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,661 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,661 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,661 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,662 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,662 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,662 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,662 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,663 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:43:57] 2025-06-04 01:33:26,663 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,663 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:43:57] 2025-06-04 01:33:26,664 | INFO     | job 6667435385 has completed (purged errors)
[2025-06-04 03:43:57] 2025-06-04 01:33:26,664 | INFO     | overall cleanup function is called
[2025-06-04 03:43:57] 2025-06-04 01:33:27,672 | INFO     | --- collectZombieJob: --- 10, [1284188]
[2025-06-04 03:43:57] 2025-06-04 01:33:27,672 | INFO     | zombie collector waiting for pid 1284188
[2025-06-04 03:43:57] 2025-06-04 01:33:27,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:43:57] 2025-06-04 01:33:27,672 | INFO     | collected zombie processes
[2025-06-04 03:43:57] 2025-06-04 01:33:27,672 | INFO     | will attempt to kill all subprocesses of pid=1284188
[2025-06-04 03:43:57] 2025-06-04 01:33:27,995 | INFO     | process IDs to be killed: [1284188] (in reverse order)
[2025-06-04 03:43:57] 2025-06-04 01:33:28,077 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:43:57] 2025-06-04 01:33:28,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:43:57] 2025-06-04 01:33:28,087 | INFO     | did not find any defunct processes belonging to 1284188
[2025-06-04 03:43:57] 2025-06-04 01:33:28,097 | INFO     | did not find any defunct processes belonging to 1284188
[2025-06-04 03:43:57] 2025-06-04 01:33:28,098 | INFO     | ready for new job
[2025-06-04 03:43:57] 2025-06-04 01:33:28,098 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:43:57] 2025-06-04 01:33:28,100 | INFO     | **************************************
[2025-06-04 03:43:57] 2025-06-04 01:33:28,100 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:43:57] 2025-06-04 01:33:28,100 | INFO     | **************************************
[2025-06-04 03:43:57] 2025-06-04 01:33:28,100 | INFO     | 
[2025-06-04 03:43:57] 2025-06-04 01:33:28,103 | INFO     | architecture information:
[2025-06-04 03:43:57] 2025-06-04 01:33:28,103 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:43:57] 2025-06-04 01:33:28,118 | INFO     | cat /etc/os-release:
[2025-06-04 03:43:57] NAME="CentOS Linux"
[2025-06-04 03:43:57] VERSION="7 (Core)"
[2025-06-04 03:43:57] ID="centos"
[2025-06-04 03:43:57] ID_LIKE="rhel fedora"
[2025-06-04 03:43:57] VERSION_ID="7"
[2025-06-04 03:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:43:57] ANSI_COLOR="0;31"
[2025-06-04 03:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:43:57] HOME_URL="https://www.centos.org/"
[2025-06-04 03:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:43:57] 
[2025-06-04 03:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:43:57] 
[2025-06-04 03:43:57] 2025-06-04 01:33:28,118 | INFO     | **************************************
[2025-06-04 03:43:57] 2025-06-04 01:33:28,621 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-04 03:43:57] 2025-06-04 01:33:28,637 | INFO     | sufficient remaining disk space (1648383492096 B)
[2025-06-04 03:43:57] 2025-06-04 01:33:28,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:43:57] 2025-06-04 01:33:28,638 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:43:57] 2025-06-04 01:33:28,638 | INFO     | update_server=False
[2025-06-04 03:43:57] 2025-06-04 01:33:28,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:43:57] 2025-06-04 01:33:28,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:43:57] 2025-06-04 01:33:28,639 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 03:43:57] 2025-06-04 01:33:28,639 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:43:57] 2025-06-04 01:33:28,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:43:57] 2025-06-04 01:33:28,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:43:57] 2025-06-04 01:33:28,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:43:57] 2025-06-04 01:33:28,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:43:57] 2025-06-04 01:33:28,640 | INFO     | aborting loop
[2025-06-04 03:43:57] 2025-06-04 01:33:29,448 | INFO     | all data control threads have been joined
[2025-06-04 03:43:57] 2025-06-04 01:33:29,466 | INFO     | all payload control threads have been joined
[2025-06-04 03:43:57] 2025-06-04 01:33:29,643 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:29,644 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:29,644 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:29,887 | INFO     | all job control threads have been joined
[2025-06-04 03:43:57] 2025-06-04 01:33:29,985 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:30,064 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:30,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:43:57] 2025-06-04 01:33:30,453 | INFO     | [data] control thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:30,471 | INFO     | [payload] control thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:30,587 | INFO     | [job] validate thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:30,617 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:30,644 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:30,661 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:30,739 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:30,891 | INFO     | [job] control thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:31,028 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:34,149 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:38,878 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:43:57] 2025-06-04 01:33:39,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:43:57] 2025-06-04 01:33:41,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23221694998336)>', '<ExcThread(monitor, started 23221449475840)>']
[2025-06-04 03:43:57] 2025-06-04 01:33:42,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:43:57] 2025-06-04 01:33:42,693 | INFO     | [monitor] control thread has ended
[2025-06-04 03:43:57] 2025-06-04 01:33:46,821 | INFO     | all workflow threads have been joined
[2025-06-04 03:43:57] 2025-06-04 01:33:46,821 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:43:57] 2025-06-04 01:33:46,821 | INFO     | traces error code: 0
[2025-06-04 03:43:57] 2025-06-04 01:33:46,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:43:57] 2025-06-04 01:33:46,958 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:43:57] 2025-06-04 01:33:46,962 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:43:57] 2025-06-04 01:33:46,964 [wrapper] pilotpid: 1277277
[2025-06-04 03:43:57] 2025-06-04 01:33:46,967 [wrapper] Pilot exit status: 0
[2025-06-04 03:43:57] 2025-06-04 01:33:46,978 [wrapper] pandaids: 6667435385
[2025-06-04 03:43:57] 2025-06-04 01:33:47,027 [wrapper] cleanup supervisor_pilot 1559233 1277278
[2025-06-04 03:43:57] 2025-06-04 01:33:47,029 [wrapper] Test setup, not cleaning
[2025-06-04 03:43:57] 2025-06-04 01:33:47,032 [wrapper] apfmon messages muted
[2025-06-04 03:43:57] 2025-06-04 01:33:47,034 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:43:57] 2025-06-04 01:33:47,036 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:43:57]  *** Error codes and diagnostics ***
[2025-06-04 03:43:57]     "exeErrorCode": 0,
[2025-06-04 03:43:57]     "exeErrorDiag": "",
[2025-06-04 03:43:57]     "pilotErrorCode": 0,
[2025-06-04 03:43:57]     "pilotErrorDiag": "",
[2025-06-04 03:43:57]  *** Listing of results directory ***
[2025-06-04 03:43:57] total 412732
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc    495897 May 27 20:37 pilot3.tar.gz
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc      5111 May 27 21:30 queuedata.json
[2025-06-04 03:43:57] -rwx------ 1 boinc boinc     37140 May 27 21:30 runpilot2-wrapper.sh
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc       100 Jun  3 23:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:43:57] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 23:02 run_atlas
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc       105 Jun  3 23:02 job.xml
[2025-06-04 03:43:57] -rw-r--r-- 2 boinc boinc 221262580 Jun  3 23:02 EVNT.44871834._002840.pool.root.1
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc      6419 Jun  3 23:02 init_data.xml
[2025-06-04 03:43:57] drwxrwx--x 2 boinc boinc      4096 Jun  3 23:02 shared
[2025-06-04 03:43:57] -rw-r--r-- 2 boinc boinc    508880 Jun  3 23:02 input.tar.gz
[2025-06-04 03:43:57] -rw-r--r-- 2 boinc boinc     15093 Jun  3 23:02 start_atlas.sh
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc         0 Jun  3 23:02 boinc_lockfile
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc      2558 Jun  3 23:02 pandaJob.out
[2025-06-04 03:43:57] -rw------- 1 boinc boinc    986853 Jun  3 23:02 agis_schedconf.cvmfs.json
[2025-06-04 03:43:57] drwx------ 4 boinc boinc      4096 Jun  3 23:02 pilot3
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc       529 Jun  4 03:32 boinc_task_state.xml
[2025-06-04 03:43:57] -rw------- 1 boinc boinc 193828621 Jun  4 03:32 HITS.44871837._072342.pool.root.1
[2025-06-04 03:43:57] -rw------- 1 boinc boinc        95 Jun  4 03:32 pilot_heartbeat.json
[2025-06-04 03:43:57] -rw------- 1 boinc boinc      1036 Jun  4 03:33 memory_monitor_summary.json
[2025-06-04 03:43:57] -rw------- 1 boinc boinc   1603667 Jun  4 03:33 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:43:57] -rw------- 1 boinc boinc    351114 Jun  4 03:33 log.44871837._072342.job.log.tgz.1
[2025-06-04 03:43:57] -rw------- 1 boinc boinc      7725 Jun  4 03:33 heartbeat.json
[2025-06-04 03:43:57] -rw------- 1 boinc boinc      4559 Jun  4 03:33 pilotlog.txt
[2025-06-04 03:43:57] -rw------- 1 boinc boinc   1503814 Jun  4 03:33 log.44871837._072342.job.log.1
[2025-06-04 03:43:57] -rw------- 1 boinc boinc       357 Jun  4 03:33 output.list
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc       620 Jun  4 03:33 runtime_log
[2025-06-04 03:43:57] -rw------- 1 boinc boinc   1873920 Jun  4 03:33 result.tar.gz
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc      9026 Jun  4 03:33 runtime_log.err
[2025-06-04 03:43:57] -rw------- 1 boinc boinc       666 Jun  4 03:33 3Y1MDmsBFe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlDaKDmVQVh4n.diag
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc        27 Jun  4 03:43 wrapper_checkpoint.txt
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc      8192 Jun  4 03:43 boinc_mmap_file
[2025-06-04 03:43:57] -rw-r--r-- 1 boinc boinc     20945 Jun  4 03:43 stderr.txt
[2025-06-04 03:43:57] HITS file was successfully produced:
[2025-06-04 03:43:57] -rw------- 1 boinc boinc 193828621 Jun  4 03:32 shared/HITS.pool.root.1
[2025-06-04 03:43:57]  *** Contents of shared directory: ***
[2025-06-04 03:43:57] total 407720
[2025-06-04 03:43:57] -rw-r--r-- 2 boinc boinc 221262580 Jun  3 23:02 ATLAS.root_0
[2025-06-04 03:43:57] -rw-r--r-- 2 boinc boinc    508880 Jun  3 23:02 input.tar.gz
[2025-06-04 03:43:57] -rw-r--r-- 2 boinc boinc     15093 Jun  3 23:02 start_atlas.sh
[2025-06-04 03:43:57] -rw------- 1 boinc boinc 193828621 Jun  4 03:32 HITS.pool.root.1
[2025-06-04 03:43:57] -rw------- 1 boinc boinc   1873920 Jun  4 03:33 result.tar.gz
03:43:59 (1273697): run_atlas exited; CPU time 63166.499594
03:43:59 (1273697): called boinc_finish(0)

</stderr_txt>
]]>

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