Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-28 02:41:52 (16096): Detected: vboxwrapper 26206
2025-05-28 02:41:52 (16096): Detected: BOINC client v8.0.2
2025-05-28 02:41:53 (16096): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-28 02:41:53 (16096): Successfully copied 'init_data.xml' to the shared directory.
2025-05-28 02:41:53 (16096): Create VM. (boinc_07865764b8cc2d03, slot#0)
2025-05-28 02:41:54 (16096): Setting Memory Size for VM. (4800MB)
2025-05-28 02:41:54 (16096): Setting CPU Count for VM. (8)
2025-05-28 02:41:55 (16096): Setting Chipset Options for VM.
2025-05-28 02:41:55 (16096): Setting Graphics Controller Options for VM.
2025-05-28 02:41:55 (16096): Setting Boot Options for VM.
2025-05-28 02:41:55 (16096): Setting Network Configuration for NAT.
2025-05-28 02:41:56 (16096): Enabling VM Network Access.
2025-05-28 02:41:56 (16096): Disabling USB Support for VM.
2025-05-28 02:41:56 (16096): Disabling COM Port Support for VM.
2025-05-28 02:41:56 (16096): Disabling LPT Port Support for VM.
2025-05-28 02:41:57 (16096): Disabling Audio Support for VM.
2025-05-28 02:41:57 (16096): Disabling Clipboard Support for VM.
2025-05-28 02:41:57 (16096): Disabling Drag and Drop Support for VM.
2025-05-28 02:41:58 (16096): Adding storage controller(s) to VM.
2025-05-28 02:41:58 (16096): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-28 02:42:01 (16096): Adding VirtualBox Guest Additions to VM.
2025-05-28 02:42:01 (16096): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-28 02:42:01 (16096): forwarding host port 52489 to guest port 80
2025-05-28 02:42:01 (16096): Enabling remote desktop for VM.
2025-05-28 02:42:02 (16096): Required extension pack not installed, remote desktop not enabled.
2025-05-28 02:42:02 (16096): Enabling shared directory for VM.
2025-05-28 02:42:02 (16096): Starting VM using VBoxManage interface. (boinc_07865764b8cc2d03, slot#0)
2025-05-28 02:42:08 (16096): Successfully started VM. (PID = '15524')
2025-05-28 02:42:08 (16096): Reporting VM Process ID to BOINC.
2025-05-28 02:42:08 (16096): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-28 02:42:08 (16096): Guest Log: CPUID EDX: 0x178bfbff
2025-05-28 02:42:08 (16096): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-28 02:42:08 (16096): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000006e8e140 sectors
2025-05-28 02:42:08 (16096): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-28 02:42:08 (16096): Detected: Web Application Enabled (http://localhost:52489)
2025-05-28 02:42:08 (16096): Preference change detected
2025-05-28 02:42:08 (16096): Setting CPU throttle for VM. (100%)
2025-05-28 02:42:08 (16096): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-28 02:42:10 (16096): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-28 02:42:10 (16096): Guest Log: BIOS: Booting from Hard Disk...
2025-05-28 02:42:13 (16096): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-28 02:42:13 (16096): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-28 02:42:13 (16096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-28 02:42:21 (16096): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-28 02:42:21 (16096): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-28 02:42:31 (16096): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-28 02:42:31 (16096): Guest Log: 00:00:00.000122 main     Log opened 2025-05-28T02:42:30.147840000Z
2025-05-28 02:42:31 (16096): Guest Log: 00:00:00.000192 main     OS Product: Linux
2025-05-28 02:42:31 (16096): Guest Log: 00:00:00.000218 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-28 02:42:31 (16096): Guest Log: 00:00:00.000238 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-28 02:42:31 (16096): Guest Log: 00:00:00.000257 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-28 02:42:31 (16096): Guest Log: 00:00:00.000258 main     Process ID: 1371
2025-05-28 02:42:31 (16096): Guest Log: 00:00:00.000258 main     Package type: LINUX_64BITS_GENERIC
2025-05-28 02:42:31 (16096): Guest Log: 00:00:00.000735 main     5.2.32 r132073 started. Verbose level = 0
2025-05-28 02:42:31 (16096): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-28 02:42:31 (16096): Guest Log: [INFO] Mounting shared directory
2025-05-28 02:42:32 (16096): Guest Log: [INFO] Checking for init_data.xml
2025-05-28 02:42:41 (16096): Guest Log: 00:00:10.058918 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 230 596 000ns (GuestNow=1 748 396 560 919 448 000 ns GuestLast=1 748 400 150 150 044 000 ns fSetTimeLastLoop=true )
2025-05-28 02:42:54 (16096): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-28 02:42:54 (16096): Guest Log: [INFO] Detected branch: prod
2025-05-28 02:42:56 (16096): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-28 02:42:56 (16096): Guest Log: Copying input files
2025-05-28 02:42:57 (16096): Guest Log: Copied input files into RunAtlas.
2025-05-28 02:42:57 (16096): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-28 02:42:57 (16096): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-28 02:42:57 (16096): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-28 02:42:57 (16096): Guest Log: Further information can be found at the LHC@home message board.
2025-05-28 02:43:15 (16096): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-28 02:43:16 (16096): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-28 02:43:16 (16096): Guest Log: 2.6.3.0 1655 0 30168 146500 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-28 02:43:19 (16096): Guest Log: copied the webapp to /var/www
2025-05-28 02:43:19 (16096): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-28 02:43:19 (16096): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-28 02:43:22 (16096): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-28 02:43:22 (16096): Guest Log:  *** Starting ATLAS job. (PandaID=6667580910 taskID=44871837) ***
2025-05-28 04:41:32 (16096): Guest Log:  *** Job finished ***
2025-05-28 04:41:32 (16096): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:19,643 | INFO     | [data] queue_monitor thread has finished
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:22,982 | INFO     | job.realtimelogging is not enabled
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:23,984 | INFO     | [payload] run_realtimelog thread has finished
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:26,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140404217055040)>', '<ExcThread(monitor, started 140402883557120)>']
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:26,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:26,261 | INFO     | [monitor] control thread has ended
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,187 | INFO     | all workflow threads have been joined
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,188 | INFO     | end of generic workflow (traces error code: 0)
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,189 | INFO     | traces error code: 0
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,310 [wrapper] ==== pilot stdout END ====
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,313 [wrapper] ==== wrapper stdout RESUME ====
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,317 [wrapper] pilotpid: 6002
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,320 [wrapper] Pilot exit status: 0
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,411 [wrapper] pandaids: 6667580910
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,449 [wrapper] cleanup supervisor_pilot  2898 6003
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,453 [wrapper] Test setup, not cleaning
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,457 [wrapper] apfmon messages muted
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,460 [wrapper] ==== wrapper stdout END ====
2025-05-28 04:41:32 (16096): Guest Log: 2025-05-28 03:41:31,464 [wrapper] ==== wrapper stderr END ====
2025-05-28 04:41:32 (16096): Guest Log:  *** Error codes and diagnostics ***
2025-05-28 04:41:32 (16096): Guest Log:     "exeErrorCode": 0,
2025-05-28 04:41:32 (16096): Guest Log:     "exeErrorDiag": "",
2025-05-28 04:41:32 (16096): Guest Log:     "pilotErrorCode": 0,
2025-05-28 04:41:32 (16096): Guest Log:     "pilotErrorDiag": "",
2025-05-28 04:41:32 (16096): Guest Log:  *** Listing of results directory ***
2025-05-28 04:41:32 (16096): Guest Log: total 197048
2025-05-28 04:41:32 (16096): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 20:43 pilot3.tar.gz
2025-05-28 04:41:32 (16096): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 20:56 queuedata.json
2025-05-28 04:41:32 (16096): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 20:56 runpilot2-wrapper.sh
2025-05-28 04:41:32 (16096): Guest Log: -rwxr-xr-x. 1 atlas atlas      8984 May 28 01:42 init_data.xml
2025-05-28 04:41:32 (16096): Guest Log: -rwxr-xr-x. 1 atlas atlas    508883 May 28 01:42 input.tar.gz
2025-05-28 04:41:32 (16096): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 28 01:42 start_atlas.sh
2025-05-28 04:41:32 (16096): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 28 01:42 EVNT.44871834._002877.pool.root.1 -> /data/./ATLAS.root_0
2025-05-28 04:41:32 (16096): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 28 01:43 pandaJob.out
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas    991169 May 28 01:44 agis_schedconf.cvmfs.json
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas   1603667 May 28 01:44 agis_ddmendpoints.agis.ALL.json
2025-05-28 04:41:32 (16096): Guest Log: drwx------. 4 atlas atlas      4096 May 28 01:44 pilot3
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas 196241264 May 28 03:40 HITS.44871837._073350.pool.root.1
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas        95 May 28 03:40 pilot_heartbeat.json
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas      1031 May 28 03:40 memory_monitor_summary.json
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas    317544 May 28 03:41 log.44871837._073350.job.log.tgz.1
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas      7724 May 28 03:41 heartbeat.json
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas      4485 May 28 03:41 pilotlog.txt
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas    567504 May 28 03:41 log.44871837._073350.job.log.1
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas       357 May 28 03:41 output.list
2025-05-28 04:41:32 (16096): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 28 03:41 runtime_log
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas    901120 May 28 03:41 result.tar.gz
2025-05-28 04:41:32 (16096): Guest Log: -rw-r--r--. 1 atlas atlas      8595 May 28 03:41 runtime_log.err
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas       654 May 28 03:41 Qa3MDmuWGe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoNaKDmCTvYdn.diag
2025-05-28 04:41:32 (16096): Guest Log: Looking for outputfile HITS.44871837._073350.pool.root.1
2025-05-28 04:41:32 (16096): Guest Log: HITS file was successfully produced
2025-05-28 04:41:32 (16096): Guest Log: -rw-------. 1 atlas atlas 196241264 May 28 03:40 /home/atlas/RunAtlas/HITS.44871837._073350.pool.root.1
2025-05-28 04:41:33 (16096): Guest Log: Successfully finished the ATLAS job!
2025-05-28 04:41:33 (16096): Guest Log: Copying the results back to the shared directory!
2025-05-28 04:41:33 (16096): Guest Log:  *** Contents of shared directory: ***
2025-05-28 04:41:33 (16096): Guest Log: total 411348
2025-05-28 04:41:33 (16096): Guest Log: -rwxrwxrwx. 1 root root 223533953 May 28 01:41 ATLAS.root_0
2025-05-28 04:41:33 (16096): Guest Log: -rwxrwxrwx. 1 root root 196241264 May 28 03:41 HITS.pool.root.1
2025-05-28 04:41:33 (16096): Guest Log: -rwxrwxrwx. 1 root root      8984 May 28 01:41 init_data.xml
2025-05-28 04:41:33 (16096): Guest Log: -rwxrwxrwx. 1 root root    508883 May 27 23:47 input.tar.gz
2025-05-28 04:41:33 (16096): Guest Log: -rwxrwxrwx. 1 root root    901120 May 28 03:41 result.tar.gz
2025-05-28 04:41:33 (16096): Guest Log: -rwxrwxrwx. 1 root root     15093 May 27 23:47 start_atlas.sh
2025-05-28 04:41:33 (16096): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-28 04:41:33 (16096): VM Completion File Detected.
2025-05-28 04:41:33 (16096): Powering off VM.
2025-05-28 04:41:33 (16096): Successfully stopped VM.
2025-05-28 04:41:33 (16096): Deregistering VM. (boinc_07865764b8cc2d03, slot#0)
2025-05-28 04:41:34 (16096): Removing network bandwidth throttle group from VM.
2025-05-28 04:41:34 (16096): Removing VM from VirtualBox.
04:41:39 (16096): called boinc_finish(0)

</stderr_txt>
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