Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:11:55 (15478): wrapper (7.7.26015): starting
12:11:55 (15478): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 12:11:55] Arguments: --nthreads 8
[2025-05-28 12:11:55] Threads: 8
[2025-05-28 12:11:55] Checking for CVMFS
[2025-05-28 12:11:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 12:11:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 12:11:56] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 12:11:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 12:11:56] 2.11.2.0 16148 22998 93892 146514 1 59 24983174 25165824 4026 130560 0 13168930 99.777 14539835 1742 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 12:11:56] CVMFS is ok
[2025-05-28 12:11:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 12:11:56] Checking for apptainer binary...
[2025-05-28 12:11:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 12:11:56] Running /usr/bin/apptainer --version
[2025-05-28 12:11:56] apptainer version 1.3.2-1.el7
[2025-05-28 12:11:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 12:11:57] cg-vwn372.simple-grid.lan
[2025-05-28 12:11:57] apptainer works
[2025-05-28 12:11:57] Set ATHENA_PROC_NUMBER=8
[2025-05-28 12:11:57] Set ATHENA_CORE_NUMBER=8
[2025-05-28 12:11:57] Starting ATLAS job with PandaID=6667102776
[2025-05-28 12:11:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 17:01:33]  *** The last 200 lines of the pilot log: ***
[2025-05-28 17:01:33] 2025-05-28 15:01:18,937 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6667102776/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 17:01:33] 2025-05-28 15:01:18,938 | INFO     | extracted standard info from prmon json
[2025-05-28 17:01:33] 2025-05-28 15:01:18,938 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 17:01:33] 2025-05-28 15:01:18,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 17:01:33] 2025-05-28 15:01:18,938 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 17:01:33] 2025-05-28 15:01:18,938 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 17:01:33] 2025-05-28 15:01:18,945 | INFO     | fitting pss+swap vs Time
[2025-05-28 17:01:33] 2025-05-28 15:01:18,945 | INFO     | sum of square deviations: 7102775035.0
[2025-05-28 17:01:33] 2025-05-28 15:01:18,948 | INFO     | sum of deviations: -32629820855.999985
[2025-05-28 17:01:33] 2025-05-28 15:01:18,949 | INFO     | mean x: 1748435826.5
[2025-05-28 17:01:33] 2025-05-28 15:01:18,949 | INFO     | mean y: 2519507.823943662
[2025-05-28 17:01:33] 2025-05-28 15:01:18,949 | INFO     | -- intersect: 8034753038.490353
[2025-05-28 17:01:33] 2025-05-28 15:01:18,949 | INFO     | intersect: 8034753038.490353
[2025-05-28 17:01:33] 2025-05-28 15:01:18,949 | INFO     | chi2: 2.596173257678708
[2025-05-28 17:01:33] 2025-05-28 15:01:18,950 | INFO     | sum of square deviations: 6734191380.0
[2025-05-28 17:01:33] 2025-05-28 15:01:18,953 | INFO     | sum of deviations: -12125463184.999992
[2025-05-28 17:01:33] 2025-05-28 15:01:18,953 | INFO     | mean x: 1748435674.0
[2025-05-28 17:01:33] 2025-05-28 15:01:18,953 | INFO     | mean y: 2527875.641577061
[2025-05-28 17:01:33] 2025-05-28 15:01:18,953 | INFO     | -- intersect: 3150729523.0422854
[2025-05-28 17:01:33] 2025-05-28 15:01:18,953 | INFO     | intersect: 3150729523.0422854
[2025-05-28 17:01:33] 2025-05-28 15:01:18,954 | INFO     | chi2: 1.7632106781204087
[2025-05-28 17:01:33] 2025-05-28 15:01:18,954 | INFO     | current chi2=1.7632106781204087 (change=32.08424465103182 %)
[2025-05-28 17:01:33] 2025-05-28 15:01:18,955 | INFO     | sum of square deviations: 6378584712.5
[2025-05-28 17:01:33] 2025-05-28 15:01:18,957 | INFO     | sum of deviations: -11567232909.000011
[2025-05-28 17:01:33] 2025-05-28 15:01:18,958 | INFO     | mean x: 1748435521.5
[2025-05-28 17:01:33] 2025-05-28 15:01:18,958 | INFO     | mean y: 2528115.0656934306
[2025-05-28 17:01:33] 2025-05-28 15:01:18,958 | INFO     | -- intersect: 3173225348.8777146
[2025-05-28 17:01:33] 2025-05-28 15:01:18,958 | INFO     | intersect: 3173225348.8777146
[2025-05-28 17:01:33] 2025-05-28 15:01:18,959 | INFO     | chi2: 1.7631142139845428
[2025-05-28 17:01:33] 2025-05-28 15:01:18,959 | INFO     | current chi2=1.7631142139845428 (change=0.005470936460563417 %)
[2025-05-28 17:01:33] 2025-05-28 15:01:18,959 | INFO     | right removable region: 273
[2025-05-28 17:01:33] 2025-05-28 15:01:18,959 | INFO     | sum of square deviations: 6734191380.0
[2025-05-28 17:01:33] 2025-05-28 15:01:18,962 | INFO     | sum of deviations: -82130120437.0
[2025-05-28 17:01:33] 2025-05-28 15:01:18,962 | INFO     | mean x: 1748435979.0
[2025-05-28 17:01:33] 2025-05-28 15:01:18,963 | INFO     | mean y: 2539853.9283154123
[2025-05-28 17:01:33] 2025-05-28 15:01:18,963 | INFO     | -- intersect: 21326444897.395313
[2025-05-28 17:01:33] 2025-05-28 15:01:18,963 | INFO     | intersect: 21326444897.395313
[2025-05-28 17:01:33] 2025-05-28 15:01:18,963 | INFO     | chi2: 0.9826412230679356
[2025-05-28 17:01:33] 2025-05-28 15:01:18,963 | INFO     | current chi2=0.9826412230679356 (change=62.15039885486937 %)
[2025-05-28 17:01:33] 2025-05-28 15:01:18,964 | INFO     | sum of square deviations: 6378584712.5
[2025-05-28 17:01:33] 2025-05-28 15:01:18,966 | INFO     | sum of deviations: -83076169193.0
[2025-05-28 17:01:33] 2025-05-28 15:01:18,967 | INFO     | mean x: 1748436131.5
[2025-05-28 17:01:33] 2025-05-28 15:01:18,967 | INFO     | mean y: 2540241.5182481753
[2025-05-28 17:01:33] 2025-05-28 15:01:18,967 | INFO     | -- intersect: 22774578621.599323
[2025-05-28 17:01:33] 2025-05-28 15:01:18,967 | INFO     | intersect: 22774578621.599323
[2025-05-28 17:01:33] 2025-05-28 15:01:18,967 | INFO     | chi2: 0.9647013851475446
[2025-05-28 17:01:33] 2025-05-28 15:01:18,967 | INFO     | current chi2=0.9647013851475446 (change=1.8256752820098934 %)
[2025-05-28 17:01:33] 2025-05-28 15:01:18,968 | INFO     | left removable region: 20
[2025-05-28 17:01:33] 2025-05-28 15:01:18,968 | INFO     | sum of square deviations: 5021496942.0
[2025-05-28 17:01:33] 2025-05-28 15:01:18,970 | INFO     | sum of deviations: -54509395894.00001
[2025-05-28 17:01:33] 2025-05-28 15:01:18,971 | INFO     | mean x: 1748436101.0
[2025-05-28 17:01:33] 2025-05-28 15:01:18,971 | INFO     | mean y: 2547026.1027667983
[2025-05-28 17:01:33] 2025-05-28 15:01:18,971 | INFO     | -- intersect: 18982185314.364178
[2025-05-28 17:01:33] 2025-05-28 15:01:18,971 | INFO     | intersect: 18982185314.364178
[2025-05-28 17:01:33] 2025-05-28 15:01:18,972 | INFO     | chi2: 0.10781949025159833
[2025-05-28 17:01:33] 2025-05-28 15:01:18,972 | INFO     | -- intersect: 18982185314.364178
[2025-05-28 17:01:33] 2025-05-28 15:01:18,972 | INFO     | current memory leak: -10.86 B/s (using 253 data points, chi2=0.11)
[2025-05-28 17:01:33] 2025-05-28 15:01:18,973 | INFO     | ..............................
[2025-05-28 17:01:33] 2025-05-28 15:01:18,973 | INFO     | . Timing measurements:
[2025-05-28 17:01:33] 2025-05-28 15:01:18,973 | INFO     | . get job = 0 s
[2025-05-28 17:01:33] 2025-05-28 15:01:18,973 | INFO     | . initial setup = 2 s
[2025-05-28 17:01:33] 2025-05-28 15:01:18,973 | INFO     | . payload setup = 13 s
[2025-05-28 17:01:33] 2025-05-28 15:01:18,973 | INFO     | . stage-in = 0 s
[2025-05-28 17:01:33] 2025-05-28 15:01:18,973 | INFO     | . payload execution = 17291 s
[2025-05-28 17:01:33] 2025-05-28 15:01:18,974 | INFO     | . stage-out = 1 s
[2025-05-28 17:01:33] 2025-05-28 15:01:18,974 | INFO     | . log creation = 0 s
[2025-05-28 17:01:33] 2025-05-28 15:01:18,974 | INFO     | ..............................
[2025-05-28 17:01:33] 2025-05-28 15:01:19,097 | INFO     | 
[2025-05-28 17:01:33] 2025-05-28 15:01:19,098 | INFO     | job summary report
[2025-05-28 17:01:33] 2025-05-28 15:01:19,098 | INFO     | --------------------------------------------------
[2025-05-28 17:01:33] 2025-05-28 15:01:19,098 | INFO     | PanDA job id: 6667102776
[2025-05-28 17:01:33] 2025-05-28 15:01:19,098 | INFO     | task id: 44871837
[2025-05-28 17:01:33] 2025-05-28 15:01:19,098 | INFO     | errors: (none)
[2025-05-28 17:01:33] 2025-05-28 15:01:19,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 17:01:33] 2025-05-28 15:01:19,099 | INFO     | pilot state: finished 
[2025-05-28 17:01:33] 2025-05-28 15:01:19,099 | INFO     | transexitcode: 0
[2025-05-28 17:01:33] 2025-05-28 15:01:19,099 | INFO     | exeerrorcode: 0
[2025-05-28 17:01:33] 2025-05-28 15:01:19,099 | INFO     | exeerrordiag: 
[2025-05-28 17:01:33] 2025-05-28 15:01:19,099 | INFO     | exitcode: 0
[2025-05-28 17:01:33] 2025-05-28 15:01:19,099 | INFO     | exitmsg: OK
[2025-05-28 17:01:33] 2025-05-28 15:01:19,099 | INFO     | cpuconsumptiontime: 69744 s
[2025-05-28 17:01:33] 2025-05-28 15:01:19,099 | INFO     | nevents: 400
[2025-05-28 17:01:33] 2025-05-28 15:01:19,100 | INFO     | neventsw: 0
[2025-05-28 17:01:33] 2025-05-28 15:01:19,100 | INFO     | pid: 25696
[2025-05-28 17:01:33] 2025-05-28 15:01:19,100 | INFO     | pgrp: 25696
[2025-05-28 17:01:33] 2025-05-28 15:01:19,100 | INFO     | corecount: 8
[2025-05-28 17:01:33] 2025-05-28 15:01:19,100 | INFO     | event service: False
[2025-05-28 17:01:33] 2025-05-28 15:01:19,100 | INFO     | sizes: {0: 2405235, 1: 2405235, 8: 2405469, 12: 2405497, 17308: 2436710, 17309: 2436709, 17310: 2445836, 17314: 2445892, 17324: 2446062}
[2025-05-28 17:01:33] 2025-05-28 15:01:19,100 | INFO     | --------------------------------------------------
[2025-05-28 17:01:33] 2025-05-28 15:01:19,100 | INFO     | 
[2025-05-28 17:01:33] 2025-05-28 15:01:19,101 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-05-28 17:01:33] 2025-05-28 15:01:19,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,141 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 17:01:33] 2025-05-28 15:01:19,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 17:01:33] 2025-05-28 15:01:19,141 | INFO     | job 6667102776 has completed (purged errors)
[2025-05-28 17:01:33] 2025-05-28 15:01:19,141 | INFO     | overall cleanup function is called
[2025-05-28 17:01:33] 2025-05-28 15:01:20,150 | INFO     | --- collectZombieJob: --- 10, [25696]
[2025-05-28 17:01:33] 2025-05-28 15:01:20,151 | INFO     | zombie collector waiting for pid 25696
[2025-05-28 17:01:33] 2025-05-28 15:01:20,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 17:01:33] 2025-05-28 15:01:20,151 | INFO     | collected zombie processes
[2025-05-28 17:01:33] 2025-05-28 15:01:20,151 | INFO     | will attempt to kill all subprocesses of pid=25696
[2025-05-28 17:01:33] 2025-05-28 15:01:20,235 | INFO     | process IDs to be killed: [25696] (in reverse order)
[2025-05-28 17:01:33] 2025-05-28 15:01:20,315 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 17:01:33] 2025-05-28 15:01:20,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 17:01:33] 2025-05-28 15:01:20,318 | INFO     | did not find any defunct processes belonging to 25696
[2025-05-28 17:01:33] 2025-05-28 15:01:20,321 | INFO     | did not find any defunct processes belonging to 25696
[2025-05-28 17:01:33] 2025-05-28 15:01:20,321 | INFO     | ready for new job
[2025-05-28 17:01:33] 2025-05-28 15:01:20,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 17:01:33] 2025-05-28 15:01:20,323 | INFO     | **************************************
[2025-05-28 17:01:33] 2025-05-28 15:01:20,324 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 17:01:33] 2025-05-28 15:01:20,324 | INFO     | **************************************
[2025-05-28 17:01:33] 2025-05-28 15:01:20,324 | INFO     | 
[2025-05-28 17:01:33] 2025-05-28 15:01:20,324 | INFO     | pilot is running in a VM
[2025-05-28 17:01:33] 2025-05-28 15:01:20,325 | INFO     | architecture information:
[2025-05-28 17:01:33] 2025-05-28 15:01:20,328 | INFO     | executing command: cat /etc/os-release
[2025-05-28 17:01:33] 2025-05-28 15:01:20,365 | INFO     | cat /etc/os-release:
[2025-05-28 17:01:33] NAME="CentOS Linux"
[2025-05-28 17:01:33] VERSION="7 (Core)"
[2025-05-28 17:01:33] ID="centos"
[2025-05-28 17:01:33] ID_LIKE="rhel fedora"
[2025-05-28 17:01:33] VERSION_ID="7"
[2025-05-28 17:01:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 17:01:33] ANSI_COLOR="0;31"
[2025-05-28 17:01:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 17:01:33] HOME_URL="https://www.centos.org/"
[2025-05-28 17:01:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 17:01:33] 
[2025-05-28 17:01:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 17:01:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 17:01:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 17:01:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 17:01:33] 
[2025-05-28 17:01:33] 2025-05-28 15:01:20,365 | INFO     | **************************************
[2025-05-28 17:01:33] 2025-05-28 15:01:20,868 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-05-28 17:01:33] 2025-05-28 15:01:20,942 | INFO     | sufficient remaining disk space (495953379328 B)
[2025-05-28 17:01:33] 2025-05-28 15:01:20,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 17:01:33] 2025-05-28 15:01:20,943 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 17:01:33] 2025-05-28 15:01:20,943 | INFO     | update_server=False
[2025-05-28 17:01:33] 2025-05-28 15:01:20,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 17:01:33] 2025-05-28 15:01:20,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 17:01:33] 2025-05-28 15:01:20,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 17:01:33] 2025-05-28 15:01:20,944 | INFO     | aborting loop
[2025-05-28 17:01:33] 2025-05-28 15:01:21,084 | INFO     | all data control threads have been joined
[2025-05-28 17:01:33] 2025-05-28 15:01:21,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 17:01:33] 2025-05-28 15:01:21,406 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 17:01:33] 2025-05-28 15:01:21,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 17:01:33] 2025-05-28 15:01:21,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 17:01:33] 2025-05-28 15:01:21,946 | INFO     | [job] queue monitor thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:21,948 | INFO     | [job] job monitor thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:21,948 | INFO     | [job] retrieve thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:22,035 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:22,068 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:22,089 | INFO     | [data] control thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:22,197 | INFO     | all payload control threads have been joined
[2025-05-28 17:01:33] 2025-05-28 15:01:22,232 | INFO     | all job control threads have been joined
[2025-05-28 17:01:33] 2025-05-28 15:01:22,340 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:22,363 | INFO     | [payload] validate_post thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:22,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:23,085 | INFO     | [data] copytool_in thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:23,099 | INFO     | [job] validate thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:23,113 | INFO     | [data] copytool_out thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:23,202 | INFO     | [payload] control thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:23,237 | INFO     | [job] control thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:23,313 | INFO     | [payload] failed_post thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:23,982 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 17:01:33] 2025-05-28 15:01:27,984 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 17:01:33] 2025-05-28 15:01:28,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756528342848)>', '<ExcThread(monitor, started 139755954108160)>']
[2025-05-28 17:01:33] 2025-05-28 15:01:28,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 17:01:33] 2025-05-28 15:01:28,440 | INFO     | [monitor] control thread has ended
[2025-05-28 17:01:33] 2025-05-28 15:01:33,344 | INFO     | all workflow threads have been joined
[2025-05-28 17:01:33] 2025-05-28 15:01:33,344 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 17:01:33] 2025-05-28 15:01:33,344 | INFO     | traces error code: 0
[2025-05-28 17:01:33] 2025-05-28 15:01:33,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 17:01:33] 2025-05-28 15:01:33,519 [wrapper] ==== pilot stdout END ====
[2025-05-28 17:01:33] 2025-05-28 15:01:33,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 17:01:33] 2025-05-28 15:01:33,530 [wrapper] pilotpid: 19169
[2025-05-28 17:01:33] 2025-05-28 15:01:33,534 [wrapper] Pilot exit status: 0
[2025-05-28 17:01:33] 2025-05-28 15:01:33,554 [wrapper] pandaids: 6667102776
[2025-05-28 17:01:33] 2025-05-28 15:01:33,595 [wrapper] cleanup supervisor_pilot 23165 19170
[2025-05-28 17:01:33] 2025-05-28 15:01:33,605 [wrapper] Test setup, not cleaning
[2025-05-28 17:01:33] 2025-05-28 15:01:33,612 [wrapper] apfmon messages muted
[2025-05-28 17:01:33] 2025-05-28 15:01:33,616 [wrapper] ==== wrapper stdout END ====
[2025-05-28 17:01:33] 2025-05-28 15:01:33,620 [wrapper] ==== wrapper stderr END ====
[2025-05-28 17:01:33]  *** Error codes and diagnostics ***
[2025-05-28 17:01:33]     "exeErrorCode": 0,
[2025-05-28 17:01:33]     "exeErrorDiag": "",
[2025-05-28 17:01:33]     "pilotErrorCode": 0,
[2025-05-28 17:01:33]     "pilotErrorDiag": "",
[2025-05-28 17:01:33]  *** Listing of results directory ***
[2025-05-28 17:01:33] total 415900
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc    495897 May 27 15:43 pilot3.tar.gz
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc      5111 May 27 16:25 queuedata.json
[2025-05-28 17:01:33] -rwx------. 1 boinc boinc     37140 May 27 16:29 runpilot2-wrapper.sh
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc       100 May 28 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 17:01:33] -rwxr-xr-x. 1 boinc boinc      7986 May 28 12:11 run_atlas
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc       105 May 28 12:11 job.xml
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc      6372 May 28 12:11 init_data.xml
[2025-05-28 17:01:33] -rw-r--r--. 2 boinc boinc 222980599 May 28 12:11 EVNT.44871834._002704.pool.root.1
[2025-05-28 17:01:33] -rw-r--r--. 2 boinc boinc     15093 May 28 12:11 start_atlas.sh
[2025-05-28 17:01:33] drwxrwx--x. 2 boinc boinc        68 May 28 12:11 shared
[2025-05-28 17:01:33] -rw-r--r--. 2 boinc boinc    508880 May 28 12:11 input.tar.gz
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc         0 May 28 12:11 boinc_lockfile
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc      2559 May 28 12:11 pandaJob.out
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc    991351 May 28 12:12 agis_schedconf.cvmfs.json
[2025-05-28 17:01:33] drwx------. 4 boinc boinc      4096 May 28 12:12 pilot3
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc 195239863 May 28 17:00 HITS.44871837._068760.pool.root.1
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc       531 May 28 17:00 boinc_task_state.xml
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc        95 May 28 17:00 pilot_heartbeat.json
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc      1020 May 28 17:00 memory_monitor_summary.json
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc   1603667 May 28 17:01 agis_ddmendpoints.agis.ALL.json
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc    416843 May 28 17:01 log.44871837._068760.job.log.tgz.1
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc      7697 May 28 17:01 heartbeat.json
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc      8192 May 28 17:01 boinc_mmap_file
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc        28 May 28 17:01 wrapper_checkpoint.txt
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc      4417 May 28 17:01 pilotlog.txt
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc   1497157 May 28 17:01 log.44871837._068760.job.log.1
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc       357 May 28 17:01 output.list
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc       620 May 28 17:01 runtime_log
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc   1935360 May 28 17:01 result.tar.gz
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc      8673 May 28 17:01 runtime_log.err
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc       657 May 28 17:01 RfpNDmNUAe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLwRKDmEXuwqm.diag
[2025-05-28 17:01:33] -rw-r--r--. 1 boinc boinc     20517 May 28 17:01 stderr.txt
[2025-05-28 17:01:33] HITS file was successfully produced:
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc 195239863 May 28 17:00 shared/HITS.pool.root.1
[2025-05-28 17:01:33]  *** Contents of shared directory: ***
[2025-05-28 17:01:33] total 410828
[2025-05-28 17:01:33] -rw-r--r--. 2 boinc boinc 222980599 May 28 12:11 ATLAS.root_0
[2025-05-28 17:01:33] -rw-r--r--. 2 boinc boinc     15093 May 28 12:11 start_atlas.sh
[2025-05-28 17:01:33] -rw-r--r--. 2 boinc boinc    508880 May 28 12:11 input.tar.gz
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc 195239863 May 28 17:00 HITS.pool.root.1
[2025-05-28 17:01:33] -rw-------. 1 boinc boinc   1935360 May 28 17:01 result.tar.gz
17:01:35 (15478): run_atlas exited; CPU time 69936.540434
17:01:35 (15478): called boinc_finish(0)

</stderr_txt>
]]>

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