Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:23:51 (5247): wrapper (7.7.26015): starting
17:23:51 (5247): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 17:23:51] Arguments: --nthreads 8
[2025-05-27 17:23:51] Threads: 8
[2025-05-27 17:23:51] Checking for CVMFS
[2025-05-27 17:23:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 17:23:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 17:23:51] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 17:23:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 17:23:52] 2.11.2.0 1598 18018 95612 146494 3 56 18462613 20275200 917 130560 0 16815391 99.992 3229683 4192 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-27 17:23:52] CVMFS is ok
[2025-05-27 17:23:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 17:23:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 17:23:52] Further information can be found at the LHC@home message board.
[2025-05-27 17:23:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 17:23:52] Checking for apptainer binary...
[2025-05-27 17:23:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 17:23:52] Running /usr/bin/apptainer --version
[2025-05-27 17:23:52] apptainer version 1.3.2-1.el7
[2025-05-27 17:23:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 17:23:52] c-205-36.aglt2.org
[2025-05-27 17:23:52] apptainer works
[2025-05-27 17:23:52] Set ATHENA_PROC_NUMBER=8
[2025-05-27 17:23:52] Set ATHENA_CORE_NUMBER=8
[2025-05-27 17:23:52] Starting ATLAS job with PandaID=6666948716
[2025-05-27 17:23:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 18:48:01]  *** The last 200 lines of the pilot log: ***
[2025-05-27 18:48:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/0d/log.44871837._066369.job.log.tgz.1
[2025-05-27 18:48:01]  workdir=None
[2025-05-27 18:48:01] ]
[2025-05-27 18:48:01] 2025-05-27 22:47:34,315 | INFO     | transferring file log.44871837._066369.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6666948716/log.44871837._066369.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-27 18:48:01] 2025-05-27 22:47:34,316 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6666948716/log.44871837._066369.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._066369.job
[2025-05-27 18:48:01] 2025-05-27 22:47:34,338 | INFO     | adding to output.list: log.44871837._066369.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/0d/log.44871837._066369.job.log.tg
[2025-05-27 18:48:01] 2025-05-27 22:47:34,339 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-27 18:48:01] 2025-05-27 22:47:34,340 | INFO     | summary of transferred files:
[2025-05-27 18:48:01] 2025-05-27 22:47:34,340 | INFO     |  -- lfn=log.44871837._066369.job.log.tgz.1, status_code=0, status=transferred
[2025-05-27 18:48:01] 2025-05-27 22:47:34,340 | INFO     | stage-out finished correctly
[2025-05-27 18:48:01] 2025-05-27 22:47:34,412 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-27 18:48:01] 2025-05-27 22:47:34,495 | INFO     | job 6666948716 has state=finished
[2025-05-27 18:48:01] 2025-05-27 22:47:34,496 | INFO     | preparing for final server update for job 6666948716 in state='finished'
[2025-05-27 18:48:01] 2025-05-27 22:47:34,496 | INFO     | this job has now completed (state=finished)
[2025-05-27 18:48:01] 2025-05-27 22:47:34,496 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-27 18:48:01] 2025-05-27 22:47:34,496 | INFO     | log transfer has been attempted: DONE
[2025-05-27 18:48:01] 2025-05-27 22:47:34,496 | INFO     | job 6666948716 has finished - writing final server update
[2025-05-27 18:48:01] 2025-05-27 22:47:34,496 | INFO     | total number of processed events: 400 (read)
[2025-05-27 18:48:01] 2025-05-27 22:47:34,497 | INFO     | executing command: lscpu
[2025-05-27 18:48:01] 2025-05-27 22:47:34,525 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-27 18:48:01] 2025-05-27 22:47:35,935 | INFO     | PID=8834 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-27 18:48:01] 2025-05-27 22:47:35,935 | INFO     | .. there are 2 such processes running
[2025-05-27 18:48:01] 2025-05-27 22:47:37,284 | WARNING  | process 15307 can no longer be monitored (due to stat problems) - aborting
[2025-05-27 18:48:01] 2025-05-27 22:47:37,284 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6666948716/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 18:48:01] 2025-05-27 22:47:37,285 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6666948716/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 18:48:01] 2025-05-27 22:47:37,286 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3059740 B
[2025-05-27 18:48:01] 2025-05-27 22:47:37,286 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15789 B
[2025-05-27 18:48:01] 2025-05-27 22:47:37,286 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-27 18:48:01] 2025-05-27 22:47:40,295 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-27 18:48:01] 2025-05-27 22:47:40,296 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6666948716/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,302 | INFO     | extracted standard info from prmon json
[2025-05-27 18:48:01] 2025-05-27 22:47:40,303 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 18:48:01] 2025-05-27 22:47:40,303 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 18:48:01] 2025-05-27 22:47:40,304 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 18:48:01] 2025-05-27 22:47:40,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 18:48:01] 2025-05-27 22:47:40,307 | INFO     | fitting pss+swap vs Time
[2025-05-27 18:48:01] 2025-05-27 22:47:40,307 | INFO     | sum of square deviations: 130793150.0
[2025-05-27 18:48:01] 2025-05-27 22:47:40,308 | INFO     | sum of deviations: -12058189945.0
[2025-05-27 18:48:01] 2025-05-27 22:47:40,308 | INFO     | mean x: 1748383632.0
[2025-05-27 18:48:01] 2025-05-27 22:47:40,308 | INFO     | mean y: 2641987.36
[2025-05-27 18:48:01] 2025-05-27 22:47:40,308 | INFO     | -- intersect: 161191067615.0399
[2025-05-27 18:48:01] 2025-05-27 22:47:40,308 | INFO     | intersect: 161191067615.0399
[2025-05-27 18:48:01] 2025-05-27 22:47:40,309 | INFO     | chi2: 0.06437609266905947
[2025-05-27 18:48:01] 2025-05-27 22:47:40,309 | INFO     | -- intersect: 161191067615.0399
[2025-05-27 18:48:01] 2025-05-27 22:47:40,309 | INFO     | current memory leak: -92.19 B/s (using 75 data points, chi2=0.06)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,310 | INFO     | ..............................
[2025-05-27 18:48:01] 2025-05-27 22:47:40,310 | INFO     | . Timing measurements:
[2025-05-27 18:48:01] 2025-05-27 22:47:40,310 | INFO     | . get job = 0 s
[2025-05-27 18:48:01] 2025-05-27 22:47:40,310 | INFO     | . initial setup = 2 s
[2025-05-27 18:48:01] 2025-05-27 22:47:40,310 | INFO     | . payload setup = 7 s
[2025-05-27 18:48:01] 2025-05-27 22:47:40,310 | INFO     | . stage-in = 0 s
[2025-05-27 18:48:01] 2025-05-27 22:47:40,310 | INFO     | . payload execution = 4983 s
[2025-05-27 18:48:01] 2025-05-27 22:47:40,310 | INFO     | . stage-out = 0 s
[2025-05-27 18:48:01] 2025-05-27 22:47:40,310 | INFO     | . log creation = 0 s
[2025-05-27 18:48:01] 2025-05-27 22:47:40,311 | INFO     | ..............................
[2025-05-27 18:48:01] 2025-05-27 22:47:40,349 | INFO     | sufficient remaining disk space (32808894464 B)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,364 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,398 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6666948716: 3362018 B (within 2537553920 B limit)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,398 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6666948716/HITS.44871837._066369.pool.root.1 does not exist (skip from workdir size calculation)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,398 | INFO     | total size of present files: 0 B (workdir size: 3362018 B)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,398 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6666948716/HITS.44871837._066369.pool.root.1 since it does not exist
[2025-05-27 18:48:01] 2025-05-27 22:47:40,514 | INFO     | number of running child processes to parent process 15307: 1
[2025-05-27 18:48:01] 2025-05-27 22:47:40,514 | INFO     | maximum number of monitored processes: 6
[2025-05-27 18:48:01] 2025-05-27 22:47:40,514 | INFO     | aborting job monitoring since job object (job id=6666948716) has expired
[2025-05-27 18:48:01] 2025-05-27 22:47:40,805 | INFO     | 
[2025-05-27 18:48:01] 2025-05-27 22:47:40,806 | INFO     | job summary report
[2025-05-27 18:48:01] 2025-05-27 22:47:40,806 | INFO     | --------------------------------------------------
[2025-05-27 18:48:01] 2025-05-27 22:47:40,806 | INFO     | PanDA job id: 6666948716
[2025-05-27 18:48:01] 2025-05-27 22:47:40,806 | INFO     | task id: 44871837
[2025-05-27 18:48:01] 2025-05-27 22:47:40,806 | INFO     | errors: (none)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,806 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 18:48:01] 2025-05-27 22:47:40,806 | INFO     | pilot state: finished 
[2025-05-27 18:48:01] 2025-05-27 22:47:40,807 | INFO     | transexitcode: 0
[2025-05-27 18:48:01] 2025-05-27 22:47:40,807 | INFO     | exeerrorcode: 0
[2025-05-27 18:48:01] 2025-05-27 22:47:40,807 | INFO     | exeerrordiag: 
[2025-05-27 18:48:01] 2025-05-27 22:47:40,807 | INFO     | exitcode: 0
[2025-05-27 18:48:01] 2025-05-27 22:47:40,807 | INFO     | exitmsg: OK
[2025-05-27 18:48:01] 2025-05-27 22:47:40,807 | INFO     | cpuconsumptiontime: 37486 s
[2025-05-27 18:48:01] 2025-05-27 22:47:40,807 | INFO     | nevents: 400
[2025-05-27 18:48:01] 2025-05-27 22:47:40,807 | INFO     | neventsw: 0
[2025-05-27 18:48:01] 2025-05-27 22:47:40,807 | INFO     | pid: 15307
[2025-05-27 18:48:01] 2025-05-27 22:47:40,808 | INFO     | pgrp: 15307
[2025-05-27 18:48:01] 2025-05-27 22:47:40,808 | INFO     | corecount: 8
[2025-05-27 18:48:01] 2025-05-27 22:47:40,808 | INFO     | event service: False
[2025-05-27 18:48:01] 2025-05-27 22:47:40,808 | INFO     | sizes: {0: 2405234, 4: 2405440, 11: 2405468, 4994: 2431729, 4995: 2440726, 5001: 2440840}
[2025-05-27 18:48:01] 2025-05-27 22:47:40,808 | INFO     | --------------------------------------------------
[2025-05-27 18:48:01] 2025-05-27 22:47:40,808 | INFO     | 
[2025-05-27 18:48:01] 2025-05-27 22:47:40,808 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-27 18:48:01] 2025-05-27 22:47:40,831 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,831 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,831 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,831 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,831 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,833 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,833 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 18:48:01] 2025-05-27 22:47:40,833 | INFO     | job 6666948716 has completed (purged errors)
[2025-05-27 18:48:01] 2025-05-27 22:47:40,833 | INFO     | overall cleanup function is called
[2025-05-27 18:48:01] 2025-05-27 22:47:41,841 | INFO     | --- collectZombieJob: --- 10, [15307]
[2025-05-27 18:48:01] 2025-05-27 22:47:41,842 | INFO     | zombie collector waiting for pid 15307
[2025-05-27 18:48:01] 2025-05-27 22:47:41,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 18:48:01] 2025-05-27 22:47:41,842 | INFO     | collected zombie processes
[2025-05-27 18:48:01] 2025-05-27 22:47:41,842 | INFO     | will attempt to kill all subprocesses of pid=15307
[2025-05-27 18:48:01] 2025-05-27 22:47:41,961 | INFO     | process IDs to be killed: [15307] (in reverse order)
[2025-05-27 18:48:01] 2025-05-27 22:47:42,022 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 18:48:01] 2025-05-27 22:47:42,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 18:48:01] 2025-05-27 22:47:42,025 | INFO     | did not find any defunct processes belonging to 15307
[2025-05-27 18:48:01] 2025-05-27 22:47:42,028 | INFO     | did not find any defunct processes belonging to 15307
[2025-05-27 18:48:01] 2025-05-27 22:47:42,028 | INFO     | ready for new job
[2025-05-27 18:48:01] 2025-05-27 22:47:42,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 18:48:01] 2025-05-27 22:47:42,030 | INFO     | **************************************
[2025-05-27 18:48:01] 2025-05-27 22:47:42,030 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 18:48:01] 2025-05-27 22:47:42,030 | INFO     | **************************************
[2025-05-27 18:48:01] 2025-05-27 22:47:42,030 | INFO     | 
[2025-05-27 18:48:01] 2025-05-27 22:47:42,031 | INFO     | architecture information:
[2025-05-27 18:48:01] 2025-05-27 22:47:42,031 | INFO     | executing command: cat /etc/os-release
[2025-05-27 18:48:01] 2025-05-27 22:47:42,047 | INFO     | cat /etc/os-release:
[2025-05-27 18:48:01] NAME="CentOS Linux"
[2025-05-27 18:48:01] VERSION="7 (Core)"
[2025-05-27 18:48:01] ID="centos"
[2025-05-27 18:48:01] ID_LIKE="rhel fedora"
[2025-05-27 18:48:01] VERSION_ID="7"
[2025-05-27 18:48:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 18:48:01] ANSI_COLOR="0;31"
[2025-05-27 18:48:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 18:48:01] HOME_URL="https://www.centos.org/"
[2025-05-27 18:48:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 18:48:01] 
[2025-05-27 18:48:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 18:48:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 18:48:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 18:48:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 18:48:01] 
[2025-05-27 18:48:01] 2025-05-27 22:47:42,047 | INFO     | **************************************
[2025-05-27 18:48:01] 2025-05-27 22:47:42,551 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-27 18:48:01] 2025-05-27 22:47:42,569 | INFO     | sufficient remaining disk space (32813088768 B)
[2025-05-27 18:48:01] 2025-05-27 22:47:42,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 18:48:01] 2025-05-27 22:47:42,570 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 18:48:01] 2025-05-27 22:47:42,570 | INFO     | update_server=False
[2025-05-27 18:48:01] 2025-05-27 22:47:42,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 18:48:01] 2025-05-27 22:47:42,571 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 18:48:01] 2025-05-27 22:47:42,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 18:48:01] 2025-05-27 22:47:42,571 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 18:48:01] 2025-05-27 22:47:42,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 18:48:01] 2025-05-27 22:47:42,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 18:48:01] 2025-05-27 22:47:43,017 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-27 18:48:01] 2025-05-27 22:47:43,017 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-27 18:48:01] 2025-05-27 22:47:43,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 18:48:01] 2025-05-27 22:47:43,018 | INFO     | will abort loop
[2025-05-27 18:48:01] 2025-05-27 22:47:43,403 | INFO     | all payload control threads have been joined
[2025-05-27 18:48:01] 2025-05-27 22:47:43,576 | INFO     | [job] retrieve thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:43,595 | INFO     | [job] validate thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:43,649 | INFO     | all data control threads have been joined
[2025-05-27 18:48:01] 2025-05-27 22:47:43,735 | INFO     | [data] copytool_in thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:43,746 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:43,763 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:44,023 | INFO     | [job] job monitor thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:44,241 | INFO     | [payload] validate_post thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:44,271 | INFO     | all job control threads have been joined
[2025-05-27 18:48:01] 2025-05-27 22:47:44,409 | INFO     | [payload] control thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:44,577 | INFO     | [data] copytool_out thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:44,650 | INFO     | [data] control thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:44,914 | INFO     | [payload] failed_post thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:45,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 18:48:01] 2025-05-27 22:47:45,053 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:45,276 | INFO     | [job] control thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:45,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 18:48:01] 2025-05-27 22:47:46,414 | INFO     | [job] queue monitor thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:49,010 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:53,548 | INFO     | job.realtimelogging is not enabled
[2025-05-27 18:48:01] 2025-05-27 22:47:54,554 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 18:48:01] 2025-05-27 22:47:56,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175269066560)>', '<ExcThread(monitor, started 140174705026816)>']
[2025-05-27 18:48:01] 2025-05-27 22:47:56,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 18:48:01] 2025-05-27 22:47:56,638 | INFO     | [monitor] control thread has ended
[2025-05-27 18:48:01] 2025-05-27 22:48:01,165 | INFO     | all workflow threads have been joined
[2025-05-27 18:48:01] 2025-05-27 22:48:01,165 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 18:48:01] 2025-05-27 22:48:01,165 | INFO     | traces error code: 0
[2025-05-27 18:48:01] 2025-05-27 22:48:01,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 18:48:01] 2025-05-27 22:48:01,271 [wrapper] ==== pilot stdout END ====
[2025-05-27 18:48:01] 2025-05-27 22:48:01,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 18:48:01] 2025-05-27 22:48:01,278 [wrapper] pilotpid: 8834
[2025-05-27 18:48:01] 2025-05-27 22:48:01,281 [wrapper] Pilot exit status: 0
[2025-05-27 18:48:01] 2025-05-27 22:48:01,293 [wrapper] pandaids: 6666948716
[2025-05-27 18:48:01] 2025-05-27 22:48:01,334 [wrapper] cleanup supervisor_pilot  1743 8835
[2025-05-27 18:48:01] 2025-05-27 22:48:01,338 [wrapper] Test setup, not cleaning
[2025-05-27 18:48:01] 2025-05-27 22:48:01,342 [wrapper] apfmon messages muted
[2025-05-27 18:48:01] 2025-05-27 22:48:01,345 [wrapper] ==== wrapper stdout END ====
[2025-05-27 18:48:01] 2025-05-27 22:48:01,349 [wrapper] ==== wrapper stderr END ====
[2025-05-27 18:48:01]  *** Error codes and diagnostics ***
[2025-05-27 18:48:01]     "exeErrorCode": 0,
[2025-05-27 18:48:01]     "exeErrorDiag": "",
[2025-05-27 18:48:01]     "pilotErrorCode": 0,
[2025-05-27 18:48:01]     "pilotErrorDiag": "",
[2025-05-27 18:48:01]  *** Listing of results directory ***
[2025-05-27 18:48:01] total 415228
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas    495897 May 27 06:25 pilot3.tar.gz
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas      5111 May 27 07:08 queuedata.json
[2025-05-27 18:48:01] -rwx------ 1 boincer umatlas     37140 May 27 07:09 runpilot2-wrapper.sh
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas       100 May 27 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 18:48:01] -rwxr-xr-x 1 boincer umatlas      7986 May 27 17:23 run_atlas
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas       105 May 27 17:23 job.xml
[2025-05-27 18:48:01] -rw-r--r-- 2 boincer umatlas 224623690 May 27 17:23 EVNT.44871834._002613.pool.root.1
[2025-05-27 18:48:01] -rw-r--r-- 2 boincer umatlas     15093 May 27 17:23 start_atlas.sh
[2025-05-27 18:48:01] drwxrwx--x 2 boincer umatlas      4096 May 27 17:23 shared
[2025-05-27 18:48:01] -rw-r--r-- 2 boincer umatlas    508872 May 27 17:23 input.tar.gz
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas         0 May 27 17:23 boinc_lockfile
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas      2559 May 27 17:23 pandaJob.out
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas    991111 May 27 17:24 agis_schedconf.cvmfs.json
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas   1603667 May 27 17:24 agis_ddmendpoints.agis.ALL.json
[2025-05-27 18:48:01] drwx------ 4 boincer umatlas      4096 May 27 17:24 pilot3
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas      6050 May 27 18:40 init_data.xml
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas        95 May 27 18:47 pilot_heartbeat.json
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas 195150496 May 27 18:47 HITS.44871837._066369.pool.root.1
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas       529 May 27 18:47 boinc_task_state.xml
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas      1047 May 27 18:47 memory_monitor_summary.json
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas    301918 May 27 18:47 log.44871837._066369.job.log.tgz.1
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas      7743 May 27 18:47 heartbeat.json
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas      8192 May 27 18:47 boinc_mmap_file
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas        27 May 27 18:47 wrapper_checkpoint.txt
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas      4734 May 27 18:48 pilotlog.txt
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas    490228 May 27 18:48 log.44871837._066369.job.log.1
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas       357 May 27 18:48 output.list
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas       620 May 27 18:48 runtime_log
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas    808960 May 27 18:48 result.tar.gz
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas      8659 May 27 18:48 runtime_log.err
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas       658 May 27 18:48 3RbLDmiM7d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgkRKDmYPB50m.diag
[2025-05-27 18:48:01] -rw-r--r-- 1 boincer umatlas     22484 May 27 18:48 stderr.txt
[2025-05-27 18:48:01] HITS file was successfully produced:
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas 195150496 May 27 18:47 shared/HITS.pool.root.1
[2025-05-27 18:48:01]  *** Contents of shared directory: ***
[2025-05-27 18:48:01] total 411252
[2025-05-27 18:48:01] -rw-r--r-- 2 boincer umatlas 224623690 May 27 17:23 ATLAS.root_0
[2025-05-27 18:48:01] -rw-r--r-- 2 boincer umatlas     15093 May 27 17:23 start_atlas.sh
[2025-05-27 18:48:01] -rw-r--r-- 2 boincer umatlas    508872 May 27 17:23 input.tar.gz
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas 195150496 May 27 18:47 HITS.pool.root.1
[2025-05-27 18:48:01] -rw------- 1 boincer umatlas    808960 May 27 18:48 result.tar.gz
18:48:02 (5247): run_atlas exited; CPU time 37497.165607
18:48:02 (5247): called boinc_finish(0)

</stderr_txt>
]]>

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