Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-27 17:33:20 (11044): Detected: vboxwrapper 26206
2025-05-27 17:33:20 (11044): Detected: BOINC client v8.0.2
2025-05-27 17:33:22 (11044): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-05-27 17:33:22 (11044): Successfully copied 'init_data.xml' to the shared directory.
2025-05-27 17:33:23 (11044): Create VM. (boinc_eb3c8303c95d8429, slot#1)
2025-05-27 17:33:23 (11044): Setting Memory Size for VM. (4400MB)
2025-05-27 17:33:23 (11044): Setting CPU Count for VM. (4)
2025-05-27 17:33:24 (11044): Setting Chipset Options for VM.
2025-05-27 17:33:24 (11044): Setting Graphics Controller Options for VM.
2025-05-27 17:33:24 (11044): Setting Boot Options for VM.
2025-05-27 17:33:25 (11044): Setting Network Configuration for NAT.
2025-05-27 17:33:25 (11044): Enabling VM Network Access.
2025-05-27 17:33:25 (11044): Disabling USB Support for VM.
2025-05-27 17:33:25 (11044): Disabling COM Port Support for VM.
2025-05-27 17:33:26 (11044): Disabling LPT Port Support for VM.
2025-05-27 17:33:26 (11044): Disabling Audio Support for VM.
2025-05-27 17:33:26 (11044): Disabling Clipboard Support for VM.
2025-05-27 17:33:27 (11044): Disabling Drag and Drop Support for VM.
2025-05-27 17:33:27 (11044): Adding storage controller(s) to VM.
2025-05-27 17:33:27 (11044): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-27 17:33:30 (11044): Adding VirtualBox Guest Additions to VM.
2025-05-27 17:33:30 (11044): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-27 17:33:31 (11044): forwarding host port 50434 to guest port 80
2025-05-27 17:33:31 (11044): Enabling remote desktop for VM.
2025-05-27 17:33:31 (11044): Required extension pack not installed, remote desktop not enabled.
2025-05-27 17:33:31 (11044): Enabling shared directory for VM.
2025-05-27 17:33:32 (11044): Starting VM using VBoxManage interface. (boinc_eb3c8303c95d8429, slot#1)
2025-05-27 17:33:43 (11044): Successfully started VM. (PID = '10492')
2025-05-27 17:33:43 (11044): Reporting VM Process ID to BOINC.
2025-05-27 17:33:43 (11044): Guest Log: BIOS: VirtualBox 7.0.18
2025-05-27 17:33:43 (11044): Guest Log: CPUID EDX: 0x178bfbff
2025-05-27 17:33:43 (11044): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-27 17:33:43 (11044): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-27 17:33:43 (11044): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-27 17:33:43 (11044): Detected: Web Application Enabled (http://localhost:50434)
2025-05-27 17:33:43 (11044): Preference change detected
2025-05-27 17:33:43 (11044): Setting CPU throttle for VM. (100%)
2025-05-27 17:33:43 (11044): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-27 17:33:45 (11044): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-27 17:33:45 (11044): Guest Log: BIOS: Booting from Hard Disk...
2025-05-27 17:33:48 (11044): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-27 17:33:48 (11044): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-27 17:33:48 (11044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-27 17:34:00 (11044): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-27 17:34:00 (11044): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-27 17:34:17 (11044): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-27 17:34:17 (11044): Guest Log: 00:00:00.000397 main     Log opened 2025-05-27T17:34:15.616348000Z
2025-05-27 17:34:17 (11044): Guest Log: 00:00:00.000643 main     OS Product: Linux
2025-05-27 17:34:17 (11044): Guest Log: 00:00:00.000746 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-27 17:34:17 (11044): Guest Log: 00:00:00.000834 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-27 17:34:17 (11044): Guest Log: 00:00:00.001001 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-27 17:34:17 (11044): Guest Log: 00:00:00.001004 main     Process ID: 1307
2025-05-27 17:34:17 (11044): Guest Log: 00:00:00.001006 main     Package type: LINUX_64BITS_GENERIC
2025-05-27 17:34:17 (11044): Guest Log: 00:00:00.003350 main     5.2.32 r132073 started. Verbose level = 0
2025-05-27 17:34:17 (11044): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-27 17:34:17 (11044): Guest Log: [INFO] Mounting shared directory
2025-05-27 17:34:17 (11044): Guest Log: [INFO] Checking for init_data.xml
2025-05-27 17:34:23 (11044): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-27 17:34:23 (11044): Guest Log: [INFO] Detected branch: prod
2025-05-27 17:34:23 (11044): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-27 17:34:23 (11044): Guest Log: Copying input files
2025-05-27 17:34:27 (11044): Guest Log: 00:00:10.007681 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 120 607 000ns (GuestNow=1 748 381 666 743 343 000 ns GuestLast=1 748 367 255 622 736 000 ns fSetTimeLastLoop=true )
2025-05-27 17:34:27 (11044): Guest Log: Copied input files into RunAtlas.
2025-05-27 17:34:27 (11044): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-27 17:34:27 (11044): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-27 17:34:27 (11044): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-27 17:34:27 (11044): Guest Log: Further information can be found at the LHC@home message board.
2025-05-27 17:34:38 (11044): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-27 17:34:38 (11044): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-27 17:34:38 (11044): Guest Log: 2.6.3.0 1585 0 30132 146494 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-27 17:34:40 (11044): Guest Log: copied the webapp to /var/www
2025-05-27 17:34:41 (11044): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-27 17:34:41 (11044): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-27 17:34:41 (11044): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-27 17:34:41 (11044): Guest Log:  *** Starting ATLAS job. (PandaID=6667366257 taskID=44871837) ***
2025-05-27 19:16:19 (11044): Status Report: Elapsed Time: '6000.324371'
2025-05-27 19:16:19 (11044): Status Report: CPU Time: '19469.078125'
2025-05-27 21:01:44 (11044): Status Report: Elapsed Time: '12002.516500'
2025-05-27 21:01:44 (11044): Status Report: CPU Time: '44564.078125'
2025-05-27 22:45:26 (11044): Status Report: Elapsed Time: '18002.877439'
2025-05-27 22:45:26 (11044): Status Report: CPU Time: '69148.750000'
2025-05-28 00:30:21 (11044): Status Report: Elapsed Time: '24003.186987'
2025-05-28 00:30:21 (11044): Status Report: CPU Time: '94072.812500'
2025-05-28 02:15:10 (11044): Status Report: Elapsed Time: '30003.226292'
2025-05-28 02:15:10 (11044): Status Report: CPU Time: '118985.875000'
2025-05-28 04:00:29 (11044): Status Report: Elapsed Time: '36004.103916'
2025-05-28 04:00:29 (11044): Status Report: CPU Time: '143974.171875'
2025-05-28 05:46:54 (11044): Status Report: Elapsed Time: '42004.684832'
2025-05-28 05:46:54 (11044): Status Report: CPU Time: '169235.578125'
2025-05-28 06:48:26 (11044): Guest Log:  *** Job finished ***
2025-05-28 06:48:26 (11044): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:13,071 | INFO     | [job] control thread has finished
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:14,073 | INFO     | [job] queue monitor thread has finished
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:14,467 | INFO     | [data] queue_monitor thread has finished
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:15,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467584689984)>', '<ExcThread(monitor, started 140466762802944)>']
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:16,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:16,549 | INFO     | [monitor] control thread has ended
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:20,717 | INFO     | all workflow threads have been joined
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:20,717 | INFO     | end of generic workflow (traces error code: 0)
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:20,718 | INFO     | traces error code: 0
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:20,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:20,975 [wrapper] ==== pilot stdout END ====
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:20,992 [wrapper] ==== wrapper stdout RESUME ====
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:21,010 [wrapper] pilotpid: 5904
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:21,027 [wrapper] Pilot exit status: 0
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:21,118 [wrapper] pandaids: 6667366257
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:21,221 [wrapper] cleanup supervisor_pilot 30071 5905
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:21,237 [wrapper] Test setup, not cleaning
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:21,253 [wrapper] apfmon messages muted
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:21,268 [wrapper] ==== wrapper stdout END ====
2025-05-28 06:48:26 (11044): Guest Log: 2025-05-28 10:48:21,286 [wrapper] ==== wrapper stderr END ====
2025-05-28 06:48:26 (11044): Guest Log:  *** Error codes and diagnostics ***
2025-05-28 06:48:26 (11044): Guest Log:     "exeErrorCode": 0,
2025-05-28 06:48:26 (11044): Guest Log:     "exeErrorDiag": "",
2025-05-28 06:48:26 (11044): Guest Log:     "pilotErrorCode": 0,
2025-05-28 06:48:26 (11044): Guest Log:     "pilotErrorDiag": "",
2025-05-28 06:48:26 (11044): Guest Log:  *** Listing of results directory ***
2025-05-28 06:48:26 (11044): Guest Log: total 210936
2025-05-28 06:48:26 (11044): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 17:43 pilot3.tar.gz
2025-05-28 06:48:26 (11044): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 17:55 queuedata.json
2025-05-28 06:48:26 (11044): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 17:56 runpilot2-wrapper.sh
2025-05-28 06:48:26 (11044): Guest Log: -rwxr-xr-x. 1 atlas atlas      6382 May 27 21:34 init_data.xml
2025-05-28 06:48:26 (11044): Guest Log: -rwxr-xr-x. 1 atlas atlas    508879 May 27 21:34 input.tar.gz
2025-05-28 06:48:26 (11044): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 27 21:34 start_atlas.sh
2025-05-28 06:48:26 (11044): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 27 21:34 EVNT.44871834._002801.pool.root.1 -> /data/./ATLAS.root_0
2025-05-28 06:48:26 (11044): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 27 21:34 pandaJob.out
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas    991111 May 27 21:35 agis_schedconf.cvmfs.json
2025-05-28 06:48:26 (11044): Guest Log: drwx------. 4 atlas atlas      4096 May 27 21:35 pilot3
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas 203529042 May 28 10:46 HITS.44871837._071309.pool.root.1
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas      1030 May 28 10:47 memory_monitor_summary.json
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas        96 May 28 10:47 pilot_heartbeat.json
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas   1603667 May 28 10:47 agis_ddmendpoints.agis.ALL.json
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas    605723 May 28 10:47 log.44871837._071309.job.log.tgz.1
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas      7729 May 28 10:48 heartbeat.json
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas      4536 May 28 10:48 pilotlog.txt
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas   3742471 May 28 10:48 log.44871837._071309.job.log.1
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas       357 May 28 10:48 output.list
2025-05-28 06:48:26 (11044): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 28 10:48 runtime_log
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas   4372480 May 28 10:48 result.tar.gz
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas       658 May 28 10:48 UWwLDmWiDe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp2ZKDmCwmtmn.diag
2025-05-28 06:48:26 (11044): Guest Log: -rw-r--r--. 1 atlas atlas      8587 May 28 10:48 runtime_log.err
2025-05-28 06:48:26 (11044): Guest Log: Looking for outputfile HITS.44871837._071309.pool.root.1
2025-05-28 06:48:26 (11044): Guest Log: HITS file was successfully produced
2025-05-28 06:48:26 (11044): Guest Log: -rw-------. 1 atlas atlas 203529042 May 28 10:46 /home/atlas/RunAtlas/HITS.44871837._071309.pool.root.1
2025-05-28 06:48:29 (11044): Guest Log: Successfully finished the ATLAS job!
2025-05-28 06:48:29 (11044): Guest Log: Copying the results back to the shared directory!
2025-05-28 06:48:29 (11044): Guest Log:  *** Contents of shared directory: ***
2025-05-28 06:48:29 (11044): Guest Log: total 426364
2025-05-28 06:48:29 (11044): Guest Log: -rwxrwxrwx. 1 root root 228152354 May 27 21:33 ATLAS.root_0
2025-05-28 06:48:29 (11044): Guest Log: -rwxrwxrwx. 1 root root 203529042 May 28 10:48 HITS.pool.root.1
2025-05-28 06:48:29 (11044): Guest Log: -rwxrwxrwx. 1 root root      6382 May 27 21:33 init_data.xml
2025-05-28 06:48:29 (11044): Guest Log: -rwxrwxrwx. 1 root root    508879 May 27 20:44 input.tar.gz
2025-05-28 06:48:29 (11044): Guest Log: -rwxrwxrwx. 1 root root   4372480 May 28 10:48 result.tar.gz
2025-05-28 06:48:29 (11044): Guest Log: -rwxrwxrwx. 1 root root     15093 May 27 20:44 start_atlas.sh
2025-05-28 06:48:29 (11044): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-28 06:48:29 (11044): VM Completion File Detected.
2025-05-28 06:48:29 (11044): Powering off VM.
2025-05-28 06:48:30 (11044): Successfully stopped VM.
2025-05-28 06:48:30 (11044): Deregistering VM. (boinc_eb3c8303c95d8429, slot#1)
2025-05-28 06:48:31 (11044): Removing network bandwidth throttle group from VM.
2025-05-28 06:48:31 (11044): Removing VM from VirtualBox.
06:48:36 (11044): called boinc_finish(0)

</stderr_txt>
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