Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:46:16 (3881680): wrapper (7.7.26015): starting
13:46:16 (3881680): wrapper: running run_atlas (--nthreads 12)
[2025-05-27 13:46:16] Arguments: --nthreads 12
[2025-05-27 13:46:16] Threads: 12
[2025-05-27 13:46:16] Checking for CVMFS
[2025-05-27 13:46:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 13:46:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 13:46:16] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 13:46:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 13:46:16] 2.11.5.0 2370 39872 249496 146492 1 412 43391556 45568001 13889 130560 0 288259878 99.780 201928060 15851 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-27 13:46:16] CVMFS is ok
[2025-05-27 13:46:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 13:46:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 13:46:16] Further information can be found at the LHC@home message board.
[2025-05-27 13:46:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 13:46:16] Checking for apptainer binary...
[2025-05-27 13:46:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 13:46:16] Running /usr/bin/apptainer --version
[2025-05-27 13:46:17] apptainer version 1.4.0-1.el9
[2025-05-27 13:46:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 13:46:17] wns0142.triumf.lcg
[2025-05-27 13:46:17] apptainer works
[2025-05-27 13:46:17] Set ATHENA_PROC_NUMBER=12
[2025-05-27 13:46:17] Set ATHENA_CORE_NUMBER=12
[2025-05-27 13:46:18] Starting ATLAS job with PandaID=6667366139
[2025-05-27 13:46:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 13:50:12]  *** The last 200 lines of the pilot log: ***
[2025-05-27 13:50:12] 2025-05-27 20:49:56,654 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-27 13:50:12] 2025-05-27 20:49:56,654 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6667366139/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,655 | INFO     | extracted standard info from prmon json
[2025-05-27 13:50:12] 2025-05-27 20:49:56,655 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 13:50:12] 2025-05-27 20:49:56,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 13:50:12] 2025-05-27 20:49:56,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 13:50:12] 2025-05-27 20:49:56,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 13:50:12] 2025-05-27 20:49:56,656 | WARNING  | wrong length of table data, x=[1748378839.0], y=[2454.0] (must be same and length>=4)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | ..............................
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . Timing measurements:
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . get job = 0 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . initial setup = 3 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . payload setup = 12 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . stage-in = 0 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . payload execution = 36 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . stage-out = 1 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . log creation = 0 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | ..............................
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 13:50:12] 2025-05-27 20:49:56,658 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667366139/pilotlog.txt
[2025-05-27 13:50:12] 2025-05-27 20:49:56,679 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-27 13:50:12] - Log from pilotlog.txt -
[2025-05-27 13:50:12] 2025-05-27 20:49:56,654 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-27 13:50:12] 2025-05-27 20:49:56,654 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6667366139/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,655 | INFO     | extracted standard info from prmon json
[2025-05-27 13:50:12] 2025-05-27 20:49:56,655 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 13:50:12] 2025-05-27 20:49:56,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 13:50:12] 2025-05-27 20:49:56,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 13:50:12] 2025-05-27 20:49:56,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 13:50:12] 2025-05-27 20:49:56,656 | WARNING  | wrong length of table data, x=[1748378839.0], y=[2454.0] (must be same and length>=4)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | ..............................
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . Timing measurements:
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . get job = 0 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . initial setup = 3 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . payload setup = 12 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . stage-in = 0 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . payload execution = 36 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . stage-out = 1 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . log creation = 0 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | ..............................
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 13:50:12] 2025-05-27 20:49:56,658 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667366139/pilotlog.txt
[2025-05-27 13:50:12] 2025-05-27 20:49:56,680 | WARNING  | 
[2025-05-27 13:50:12] [begin log extracts]
[2025-05-27 13:50:12] - Log from pilotlog.txt -
[2025-05-27 13:50:12] 2025-05-27 20:49:56,654 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-27 13:50:12] 2025-05-27 20:49:56,654 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6667366139/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,655 | INFO     | extracted standard info from prmon json
[2025-05-27 13:50:12] 2025-05-27 20:49:56,655 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 13:50:12] 2025-05-27 20:49:56,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 13:50:12] 2025-05-27 20:49:56,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 13:50:12] 2025-05-27 20:49:56,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 13:50:12] 2025-05-27 20:49:56,656 | WARNING  | wrong length of table data, x=[1748378839.0], y=[2454.0] (must be same and length>=4)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | ..............................
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . Timing measurements:
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . get job = 0 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . initial setup = 3 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . payload setup = 12 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . stage-in = 0 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . payload execution = 36 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . stage-out = 1 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | . log creation = 0 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | ..............................
[2025-05-27 13:50:12] 2025-05-27 20:49:56,657 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 13:50:12] 2025-05-27 20:49:56,658 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667366139/pilotlog.txt
[2025-05-27 13:50:12] [end log extracts]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,680 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,681 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-27 13:50:12] 2025-05-27 20:49:56,877 | INFO     | 
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | job summary report
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | --------------------------------------------------
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | PanDA job id: 6667366139
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | task id: 44871837
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-27 13:47:41,597 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | pilot state: failed 
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | transexitcode: 65
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | exeerrorcode: 65
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | exitcode: 65
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,878 | INFO     | cpuconsumptiontime: 20 s
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | nevents: 0
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | neventsw: 0
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | pid: 3893558
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | pgrp: 3893558
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | corecount: 12
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | event service: False
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | sizes: {0: 2405060, 1: 2405259, 9: 2405465, 11: 2405493, 53: 2428766, 56: 2433217, 179: 2433331}
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | --------------------------------------------------
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | 
[2025-05-27 13:50:12] 2025-05-27 20:49:56,879 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-27 13:50:12] 2025-05-27 20:49:56,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 13:50:12] 2025-05-27 20:49:56,976 | INFO     | job 6667366139 has completed (purged errors)
[2025-05-27 13:50:12] 2025-05-27 20:49:56,976 | INFO     | overall cleanup function is called
[2025-05-27 13:50:12] 2025-05-27 20:49:57,986 | INFO     | --- collectZombieJob: --- 10, [3893558]
[2025-05-27 13:50:12] 2025-05-27 20:49:57,986 | INFO     | zombie collector waiting for pid 3893558
[2025-05-27 13:50:12] 2025-05-27 20:49:57,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 13:50:12] 2025-05-27 20:49:57,986 | INFO     | collected zombie processes
[2025-05-27 13:50:12] 2025-05-27 20:49:57,986 | INFO     | will attempt to kill all subprocesses of pid=3893558
[2025-05-27 13:50:12] 2025-05-27 20:49:58,229 | INFO     | process IDs to be killed: [3893558] (in reverse order)
[2025-05-27 13:50:12] 2025-05-27 20:49:58,311 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 13:50:12] 2025-05-27 20:49:58,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 13:50:12] 2025-05-27 20:49:58,319 | INFO     | did not find any defunct processes belonging to 3893558
[2025-05-27 13:50:12] 2025-05-27 20:49:58,326 | INFO     | did not find any defunct processes belonging to 3893558
[2025-05-27 13:50:12] 2025-05-27 20:49:58,326 | INFO     | ready for new job
[2025-05-27 13:50:12] 2025-05-27 20:49:58,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 13:50:12] 2025-05-27 20:49:58,327 | INFO     | **************************************
[2025-05-27 13:50:12] 2025-05-27 20:49:58,328 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 13:50:12] 2025-05-27 20:49:58,328 | INFO     | **************************************
[2025-05-27 13:50:12] 2025-05-27 20:49:58,328 | INFO     | 
[2025-05-27 13:50:12] 2025-05-27 20:49:58,330 | INFO     | architecture information:
[2025-05-27 13:50:12] 2025-05-27 20:49:58,330 | INFO     | executing command: cat /etc/os-release
[2025-05-27 13:50:12] 2025-05-27 20:49:58,352 | INFO     | cat /etc/os-release:
[2025-05-27 13:50:12] NAME="CentOS Linux"
[2025-05-27 13:50:12] VERSION="7 (Core)"
[2025-05-27 13:50:12] ID="centos"
[2025-05-27 13:50:12] ID_LIKE="rhel fedora"
[2025-05-27 13:50:12] VERSION_ID="7"
[2025-05-27 13:50:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 13:50:12] ANSI_COLOR="0;31"
[2025-05-27 13:50:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 13:50:12] HOME_URL="https://www.centos.org/"
[2025-05-27 13:50:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 13:50:12] 
[2025-05-27 13:50:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 13:50:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 13:50:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 13:50:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 13:50:12] 
[2025-05-27 13:50:12] 2025-05-27 20:49:58,353 | INFO     | **************************************
[2025-05-27 13:50:12] 2025-05-27 20:49:58,857 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-27 13:50:12] 2025-05-27 20:49:58,959 | INFO     | sufficient remaining disk space (1801458810880 B)
[2025-05-27 13:50:12] 2025-05-27 20:49:58,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 13:50:12] 2025-05-27 20:49:58,959 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 13:50:12] 2025-05-27 20:49:58,959 | INFO     | update_server=False
[2025-05-27 13:50:12] 2025-05-27 20:49:58,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 13:50:12] 2025-05-27 20:49:59,144 | INFO     | all job control threads have been joined
[2025-05-27 13:50:12] 2025-05-27 20:49:59,608 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 13:50:12] 2025-05-27 20:49:59,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 13:50:12] 2025-05-27 20:49:59,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 13:50:12] 2025-05-27 20:49:59,760 | INFO     | all data control threads have been joined
[2025-05-27 13:50:12] 2025-05-27 20:49:59,799 | INFO     | all payload control threads have been joined
[2025-05-27 13:50:12] 2025-05-27 20:49:59,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 13:50:12] 2025-05-27 20:49:59,844 | INFO     | aborting loop
[2025-05-27 13:50:12] 2025-05-27 20:49:59,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 13:50:12] 2025-05-27 20:49:59,966 | INFO     | [job] retrieve thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:00,031 | INFO     | [payload] validate_post thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:00,114 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:00,151 | INFO     | [job] control thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:00,471 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:00,622 | INFO     | [payload] failed_post thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:00,765 | INFO     | [data] control thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:00,805 | INFO     | [payload] control thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:00,850 | INFO     | [job] job monitor thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:01,093 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:01,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:01,266 | INFO     | [data] copytool_in thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:01,449 | INFO     | [job] validate thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:01,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 13:50:12] 2025-05-27 20:50:01,854 | INFO     | [data] copytool_out thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:01,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 13:50:12] 2025-05-27 20:50:02,835 | INFO     | [job] queue monitor thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:05,926 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 13:50:12] 2025-05-27 20:50:06,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525710071616)>', '<ExcThread(monitor, started 140525315270400)>']
[2025-05-27 13:50:12] 2025-05-27 20:50:07,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 13:50:12] 2025-05-27 20:50:07,657 | INFO     | [monitor] control thread has ended
[2025-05-27 13:50:12] 2025-05-27 20:50:11,778 | INFO     | all workflow threads have been joined
[2025-05-27 13:50:12] 2025-05-27 20:50:11,779 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 13:50:12] 2025-05-27 20:50:11,779 | INFO     | traces error code: 0
[2025-05-27 13:50:12] 2025-05-27 20:50:11,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 13:50:12] 2025-05-27 20:50:11,933 [wrapper] ==== pilot stdout END ====
[2025-05-27 13:50:12] 2025-05-27 20:50:11,936 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 13:50:12] 2025-05-27 20:50:11,941 [wrapper] pilotpid: 3886828
[2025-05-27 13:50:12] 2025-05-27 20:50:11,945 [wrapper] Pilot exit status: 0
[2025-05-27 13:50:12] 2025-05-27 20:50:11,957 [wrapper] pandaids: 6667366139
[2025-05-27 13:50:12] 2025-05-27 20:50:12,010 [wrapper] cleanup supervisor_pilot 3886834 3886829
[2025-05-27 13:50:12] 2025-05-27 20:50:12,015 [wrapper] Test setup, not cleaning
[2025-05-27 13:50:12] 2025-05-27 20:50:12,030 [wrapper] apfmon messages muted
[2025-05-27 13:50:12] 2025-05-27 20:50:12,043 [wrapper] ==== wrapper stdout END ====
[2025-05-27 13:50:12] 2025-05-27 20:50:12,066 [wrapper] ==== wrapper stderr END ====
[2025-05-27 13:50:12]  *** Error codes and diagnostics ***
[2025-05-27 13:50:12]     "exeErrorCode": 65,
[2025-05-27 13:50:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 13:50:12]     "pilotErrorCode": 1305,
[2025-05-27 13:50:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 13:50:12]  *** Listing of results directory ***
[2025-05-27 13:50:12] total 225920
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc    495897 May 27 10:43 pilot3.tar.gz
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc      5111 May 27 10:51 queuedata.json
[2025-05-27 13:50:12] -rwx------. 1 boinc boinc     37140 May 27 10:53 runpilot2-wrapper.sh
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc       100 May 27 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 13:50:12] -rwxr-xr-x. 1 boinc boinc      7986 May 27 13:46 run_atlas
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc       105 May 27 13:46 job.xml
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc      6598 May 27 13:46 init_data.xml
[2025-05-27 13:50:12] -rw-r--r--. 2 boinc boinc 227319115 May 27 13:46 EVNT.44871834._002799.pool.root.1
[2025-05-27 13:50:12] drwxrwx--x. 2 boinc boinc      4096 May 27 13:46 shared
[2025-05-27 13:50:12] -rw-r--r--. 2 boinc boinc    508884 May 27 13:46 input.tar.gz
[2025-05-27 13:50:12] -rw-r--r--. 2 boinc boinc     15093 May 27 13:46 start_atlas.sh
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc         0 May 27 13:46 boinc_lockfile
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc      2559 May 27 13:46 pandaJob.out
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc    991111 May 27 13:46 agis_schedconf.cvmfs.json
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc   1603667 May 27 13:46 agis_ddmendpoints.agis.ALL.json
[2025-05-27 13:50:12] drwx------. 4 boinc boinc      4096 May 27 13:46 pilot3
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc       523 May 27 13:47 boinc_task_state.xml
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc       954 May 27 13:47 memory_monitor_summary.json
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc     20050 May 27 13:47 log.44871837._071263.job.log.tgz.1
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc        95 May 27 13:49 pilot_heartbeat.json
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc      8330 May 27 13:49 heartbeat.json
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc      8192 May 27 13:50 boinc_mmap_file
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc      4352 May 27 13:50 pilotlog.txt
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc        23 May 27 13:50 wrapper_checkpoint.txt
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc     76602 May 27 13:50 log.44871837._071263.job.log.1
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc       188 May 27 13:50 output.list
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc       620 May 27 13:50 runtime_log
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc    112640 May 27 13:50 result.tar.gz
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc       644 May 27 13:50 Yc7LDmRfDe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmK2ZKDmqtTIPo.diag
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc      8484 May 27 13:50 runtime_log.err
[2025-05-27 13:50:12] -rw-r--r--. 1 boinc boinc     21624 May 27 13:50 stderr.txt
[2025-05-27 13:50:12] No HITS result produced
[2025-05-27 13:50:12]  *** Contents of shared directory: ***
[2025-05-27 13:50:12] total 222620
[2025-05-27 13:50:12] -rw-r--r--. 2 boinc boinc 227319115 May 27 13:46 ATLAS.root_0
[2025-05-27 13:50:12] -rw-r--r--. 2 boinc boinc    508884 May 27 13:46 input.tar.gz
[2025-05-27 13:50:12] -rw-r--r--. 2 boinc boinc     15093 May 27 13:46 start_atlas.sh
[2025-05-27 13:50:12] -rw-------. 1 boinc boinc    112640 May 27 13:50 result.tar.gz
13:50:14 (3881680): run_atlas exited; CPU time 26.748241
13:50:14 (3881680): called boinc_finish(0)

</stderr_txt>
]]>

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