Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:12:42 (1243347): wrapper (7.7.26015): starting
03:12:42 (1243347): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 03:12:42] Arguments: --nthreads 4
[2025-06-03 03:12:42] Threads: 4
[2025-06-03 03:12:42] Checking for CVMFS
[2025-06-03 03:12:42] No cvmfs_config command found, will try listing directly
[2025-06-03 03:12:42] CVMFS is ok
[2025-06-03 03:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:12:42] Further information can be found at the LHC@home message board.
[2025-06-03 03:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:12:42] Checking for apptainer binary...
[2025-06-03 03:12:42] which: no apptainer in ((null))
[2025-06-03 03:12:42] apptainer is not installed, using version from CVMFS
[2025-06-03 03:12:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:12:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-03 03:12:42] apptainer works
[2025-06-03 03:12:42] Set ATHENA_PROC_NUMBER=4
[2025-06-03 03:12:42] Set ATHENA_CORE_NUMBER=4
[2025-06-03 03:12:42] Starting ATLAS job with PandaID=6667102890
[2025-06-03 03:12:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:43:31]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:43:31] 2025-06-03 05:40:53,366 | INFO     | mean x: 1748921220.5
[2025-06-03 07:43:31] 2025-06-03 05:40:53,366 | INFO     | mean y: 2361043.140151515
[2025-06-03 07:43:31] 2025-06-03 05:40:53,366 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,366 | INFO     | -- intersect: 8344232986.580631
[2025-06-03 07:43:31] 2025-06-03 05:40:53,367 | INFO     | intersect: 8344232986.580631
[2025-06-03 07:43:31] 2025-06-03 05:40:53,367 | INFO     | chi2: 2.580566451562795
[2025-06-03 07:43:31] 2025-06-03 05:40:53,368 | INFO     | sum of square deviations: 5387301010.0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,370 | INFO     | sum of deviations: -10344328271.999998
[2025-06-03 07:43:31] 2025-06-03 05:40:53,370 | INFO     | mean x: 1748921068.0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,371 | INFO     | mean y: 2369009.749034749
[2025-06-03 07:43:31] 2025-06-03 05:40:53,371 | INFO     | -- intersect: 3360528061.1232276
[2025-06-03 07:43:31] 2025-06-03 05:40:53,371 | INFO     | intersect: 3360528061.1232276
[2025-06-03 07:43:31] 2025-06-03 05:40:53,371 | INFO     | chi2: 1.8217792379573787
[2025-06-03 07:43:31] 2025-06-03 05:40:53,371 | INFO     | current chi2=1.8217792379573787 (change=29.40390134677189 %)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,372 | INFO     | sum of square deviations: 5081276667.5
[2025-06-03 07:43:31] 2025-06-03 05:40:53,374 | INFO     | sum of deviations: -10145823231.0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,374 | INFO     | mean x: 1748920915.5
[2025-06-03 07:43:31] 2025-06-03 05:40:53,374 | INFO     | mean y: 2369109.4645669293
[2025-06-03 07:43:31] 2025-06-03 05:40:53,375 | INFO     | -- intersect: 3494452618.1533184
[2025-06-03 07:43:31] 2025-06-03 05:40:53,375 | INFO     | intersect: 3494452618.1533184
[2025-06-03 07:43:31] 2025-06-03 05:40:53,375 | INFO     | chi2: 1.8210957682795685
[2025-06-03 07:43:31] 2025-06-03 05:40:53,375 | INFO     | current chi2=1.8210957682795685 (change=0.03751660264700958 %)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,376 | INFO     | right removable region: 253
[2025-06-03 07:43:31] 2025-06-03 05:40:53,376 | INFO     | sum of square deviations: 5387301010.0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,378 | INFO     | sum of deviations: -71263294956.99998
[2025-06-03 07:43:31] 2025-06-03 05:40:53,379 | INFO     | mean x: 1748921373.0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,379 | INFO     | mean y: 2382013.2355212355
[2025-06-03 07:43:31] 2025-06-03 05:40:53,379 | INFO     | -- intersect: 23137138996.25036
[2025-06-03 07:43:31] 2025-06-03 05:40:53,379 | INFO     | intersect: 23137138996.25036
[2025-06-03 07:43:31] 2025-06-03 05:40:53,380 | INFO     | chi2: 0.918843427468915
[2025-06-03 07:43:31] 2025-06-03 05:40:53,380 | INFO     | current chi2=0.918843427468915 (change=64.39373119368959 %)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,380 | INFO     | sum of square deviations: 5081276667.5
[2025-06-03 07:43:31] 2025-06-03 05:40:53,382 | INFO     | sum of deviations: -69038810427.5
[2025-06-03 07:43:31] 2025-06-03 05:40:53,383 | INFO     | mean x: 1748921525.5
[2025-06-03 07:43:31] 2025-06-03 05:40:53,383 | INFO     | mean y: 2380891.2637795275
[2025-06-03 07:43:31] 2025-06-03 05:40:53,383 | INFO     | -- intersect: 23764807059.444595
[2025-06-03 07:43:31] 2025-06-03 05:40:53,383 | INFO     | intersect: 23764807059.444595
[2025-06-03 07:43:31] 2025-06-03 05:40:53,384 | INFO     | chi2: 0.9142981750219419
[2025-06-03 07:43:31] 2025-06-03 05:40:53,384 | INFO     | current chi2=0.9142981750219419 (change=0.49467105179101833 %)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,384 | INFO     | left removable region: 20
[2025-06-03 07:43:31] 2025-06-03 05:40:53,385 | INFO     | sum of square deviations: 3922276332.0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,386 | INFO     | sum of deviations: -41734130941.0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,387 | INFO     | mean x: 1748921495.0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,387 | INFO     | mean y: 2384943.244635193
[2025-06-03 07:43:31] 2025-06-03 05:40:53,387 | INFO     | -- intersect: 18611404935.632942
[2025-06-03 07:43:31] 2025-06-03 05:40:53,387 | INFO     | intersect: 18611404935.632942
[2025-06-03 07:43:31] 2025-06-03 05:40:53,388 | INFO     | chi2: 0.12699524605104562
[2025-06-03 07:43:31] 2025-06-03 05:40:53,388 | INFO     | -- intersect: 18611404935.632942
[2025-06-03 07:43:31] 2025-06-03 05:40:53,388 | INFO     | current memory leak: -10.64 B/s (using 233 data points, chi2=0.13)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,389 | INFO     | ..............................
[2025-06-03 07:43:31] 2025-06-03 05:40:53,389 | INFO     | . Timing measurements:
[2025-06-03 07:43:31] 2025-06-03 05:40:53,389 | INFO     | . get job = 0 s
[2025-06-03 07:43:31] 2025-06-03 05:40:53,389 | INFO     | . initial setup = 1 s
[2025-06-03 07:43:31] 2025-06-03 05:40:53,389 | INFO     | . payload setup = 7 s
[2025-06-03 07:43:31] 2025-06-03 05:40:53,390 | INFO     | . stage-in = 0 s
[2025-06-03 07:43:31] 2025-06-03 05:40:53,390 | INFO     | size of work directory /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6667102890: 2414244 B (within 2537553920 B limit)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,390 | INFO     | . payload execution = 16048 s
[2025-06-03 07:43:31] 2025-06-03 05:40:53,390 | INFO     | . stage-out = 1 s
[2025-06-03 07:43:31] 2025-06-03 05:40:53,390 | INFO     | . log creation = 0 s
[2025-06-03 07:43:31] 2025-06-03 05:40:53,390 | INFO     | ..............................
[2025-06-03 07:43:31] 2025-06-03 05:40:53,391 | INFO     | pfn file=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6667102890/HITS.44871837._068874.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,391 | INFO     | total size of present files: 0 B (workdir size: 2414244 B)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,392 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6667102890/HITS.44871837._068874.pool.root.1 since it does not exist
[2025-06-03 07:43:31] 2025-06-03 05:40:53,779 | INFO     | 
[2025-06-03 07:43:31] 2025-06-03 05:40:53,779 | INFO     | job summary report
[2025-06-03 07:43:31] 2025-06-03 05:40:53,779 | INFO     | --------------------------------------------------
[2025-06-03 07:43:31] 2025-06-03 05:40:53,779 | INFO     | PanDA job id: 6667102890
[2025-06-03 07:43:31] 2025-06-03 05:40:53,780 | INFO     | task id: 44871837
[2025-06-03 07:43:31] 2025-06-03 05:40:53,780 | INFO     | errors: (none)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:43:31] 2025-06-03 05:40:53,780 | INFO     | pilot state: finished 
[2025-06-03 07:43:31] 2025-06-03 05:40:53,781 | INFO     | transexitcode: 0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,781 | INFO     | exeerrorcode: 0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,781 | INFO     | exeerrordiag: 
[2025-06-03 07:43:31] 2025-06-03 05:40:53,781 | INFO     | exitcode: 0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,781 | INFO     | exitmsg: OK
[2025-06-03 07:43:31] 2025-06-03 05:40:53,782 | INFO     | cpuconsumptiontime: 61603 s
[2025-06-03 07:43:31] 2025-06-03 05:40:53,782 | INFO     | nevents: 400
[2025-06-03 07:43:31] 2025-06-03 05:40:53,782 | INFO     | neventsw: 0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,782 | INFO     | pid: 1264143
[2025-06-03 07:43:31] 2025-06-03 05:40:53,783 | INFO     | pgrp: 1264143
[2025-06-03 07:43:31] 2025-06-03 05:40:53,783 | INFO     | corecount: 4
[2025-06-03 07:43:31] 2025-06-03 05:40:53,783 | INFO     | event service: False
[2025-06-03 07:43:31] 2025-06-03 05:40:53,783 | INFO     | sizes: {0: 2405074, 1: 2405273, 5: 2405479, 12: 2405535, 16059: 2436482, 16060: 2445445, 16061: 2445629, 16066: 2445827}
[2025-06-03 07:43:31] 2025-06-03 05:40:53,784 | INFO     | --------------------------------------------------
[2025-06-03 07:43:31] 2025-06-03 05:40:53,784 | INFO     | 
[2025-06-03 07:43:31] 2025-06-03 05:40:53,784 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-03 07:43:31] 2025-06-03 05:40:53,797 | INFO     | number of running child processes to parent process 1264143: 1
[2025-06-03 07:43:31] 2025-06-03 05:40:53,797 | INFO     | maximum number of monitored processes: 6
[2025-06-03 07:43:31] 2025-06-03 05:40:53,797 | INFO     | aborting job monitoring since job object (job id=6667102890) has expired
[2025-06-03 07:43:31] 2025-06-03 05:40:53,804 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,804 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,804 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,804 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,805 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,805 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,806 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,806 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:43:31] 2025-06-03 05:40:53,806 | INFO     | job 6667102890 has completed (purged errors)
[2025-06-03 07:43:31] 2025-06-03 05:40:53,806 | INFO     | overall cleanup function is called
[2025-06-03 07:43:31] 2025-06-03 05:40:54,814 | INFO     | --- collectZombieJob: --- 10, [1264143]
[2025-06-03 07:43:31] 2025-06-03 05:40:54,814 | INFO     | zombie collector waiting for pid 1264143
[2025-06-03 07:43:31] 2025-06-03 05:40:54,815 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:43:31] 2025-06-03 05:40:54,815 | INFO     | collected zombie processes
[2025-06-03 07:43:31] 2025-06-03 05:40:54,815 | INFO     | will attempt to kill all subprocesses of pid=1264143
[2025-06-03 07:43:31] 2025-06-03 05:40:55,095 | INFO     | process IDs to be killed: [1264143] (in reverse order)
[2025-06-03 07:43:31] 2025-06-03 05:40:55,168 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:43:31] 2025-06-03 05:40:55,168 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:43:31] 2025-06-03 05:40:55,176 | INFO     | did not find any defunct processes belonging to 1264143
[2025-06-03 07:43:31] 2025-06-03 05:40:55,184 | INFO     | did not find any defunct processes belonging to 1264143
[2025-06-03 07:43:31] 2025-06-03 05:40:55,184 | INFO     | ready for new job
[2025-06-03 07:43:31] 2025-06-03 05:40:55,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:43:31] 2025-06-03 05:40:55,186 | INFO     | **************************************
[2025-06-03 07:43:31] 2025-06-03 05:40:55,187 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:43:31] 2025-06-03 05:40:55,187 | INFO     | **************************************
[2025-06-03 07:43:31] 2025-06-03 05:40:55,187 | INFO     | 
[2025-06-03 07:43:31] 2025-06-03 05:40:55,189 | INFO     | architecture information:
[2025-06-03 07:43:31] 2025-06-03 05:40:55,190 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:43:31] 2025-06-03 05:40:55,203 | INFO     | cat /etc/os-release:
[2025-06-03 07:43:31] NAME="CentOS Linux"
[2025-06-03 07:43:31] VERSION="7 (Core)"
[2025-06-03 07:43:31] ID="centos"
[2025-06-03 07:43:31] ID_LIKE="rhel fedora"
[2025-06-03 07:43:31] VERSION_ID="7"
[2025-06-03 07:43:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:43:31] ANSI_COLOR="0;31"
[2025-06-03 07:43:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:43:31] HOME_URL="https://www.centos.org/"
[2025-06-03 07:43:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:43:31] 
[2025-06-03 07:43:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:43:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:43:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:43:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:43:31] 
[2025-06-03 07:43:31] 2025-06-03 05:40:55,203 | INFO     | **************************************
[2025-06-03 07:43:31] 2025-06-03 05:40:55,521 | INFO     | 16085s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 07:43:31] 2025-06-03 05:40:55,706 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-03 07:43:31] 2025-06-03 05:40:55,720 | INFO     | sufficient remaining disk space (1625822330880 B)
[2025-06-03 07:43:31] 2025-06-03 05:40:55,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:43:31] 2025-06-03 05:40:55,721 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:43:31] 2025-06-03 05:40:55,721 | INFO     | update_server=False
[2025-06-03 07:43:31] 2025-06-03 05:40:55,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:43:31] 2025-06-03 05:40:55,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:43:31] 2025-06-03 05:40:55,721 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:43:31] 2025-06-03 05:40:55,722 | INFO     | aborting loop
[2025-06-03 07:43:31] 2025-06-03 05:40:55,780 | INFO     | all data control threads have been joined
[2025-06-03 07:43:31] 2025-06-03 05:40:56,457 | INFO     | all payload control threads have been joined
[2025-06-03 07:43:31] 2025-06-03 05:40:56,527 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:43:31] 2025-06-03 05:40:56,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:43:31] 2025-06-03 05:40:56,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:43:31] 2025-06-03 05:40:56,726 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:56,727 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:56,786 | INFO     | [data] control thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:56,910 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:56,932 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:57,088 | INFO     | all job control threads have been joined
[2025-06-03 07:43:31] 2025-06-03 05:40:57,462 | INFO     | [payload] control thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:57,493 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:57,547 | INFO     | [job] validate thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:57,641 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:57,685 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:57,727 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:58,043 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:58,093 | INFO     | [job] control thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:40:58,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:43:31] 2025-06-03 05:40:58,515 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:43:31] 2025-06-03 05:40:59,520 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:41:02,167 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:41:06,066 | INFO     | job.realtimelogging is not enabled
[2025-06-03 07:43:31] 2025-06-03 05:41:07,072 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:43:31] 2025-06-03 05:41:08,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22372340324160)>', '<ExcThread(monitor, started 22372100830976)>']
[2025-06-03 07:43:31] 2025-06-03 05:41:08,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:43:31] 2025-06-03 05:41:08,582 | INFO     | [monitor] control thread has ended
[2025-06-03 07:43:31] 2025-06-03 05:41:13,463 | INFO     | all workflow threads have been joined
[2025-06-03 07:43:31] 2025-06-03 05:41:13,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:43:31] 2025-06-03 05:41:13,463 | INFO     | traces error code: 0
[2025-06-03 07:43:31] 2025-06-03 05:41:13,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:43:31] 2025-06-03 05:41:13,596 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:43:31] 2025-06-03 05:41:13,598 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:43:31] 2025-06-03 05:41:13,600 [wrapper] pilotpid: 1250288
[2025-06-03 07:43:31] 2025-06-03 05:41:13,602 [wrapper] Pilot exit status: 0
[2025-06-03 07:43:31] 2025-06-03 05:41:13,611 [wrapper] pandaids: 6667102890
[2025-06-03 07:43:31] 2025-06-03 05:41:13,662 [wrapper] cleanup supervisor_pilot 1546361 1250289
[2025-06-03 07:43:31] 2025-06-03 05:41:13,665 [wrapper] Test setup, not cleaning
[2025-06-03 07:43:31] 2025-06-03 05:41:13,667 [wrapper] apfmon messages muted
[2025-06-03 07:43:31] 2025-06-03 05:41:13,669 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:43:31] 2025-06-03 05:41:13,672 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:43:31]  *** Error codes and diagnostics ***
[2025-06-03 07:43:31]     "exeErrorCode": 0,
[2025-06-03 07:43:31]     "exeErrorDiag": "",
[2025-06-03 07:43:31]     "pilotErrorCode": 0,
[2025-06-03 07:43:31]     "pilotErrorDiag": "",
[2025-06-03 07:43:31]  *** Listing of results directory ***
[2025-06-03 07:43:31] total 418856
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc    495897 May 27 15:43 pilot3.tar.gz
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc      5111 May 27 16:35 queuedata.json
[2025-06-03 07:43:31] -rwx------ 1 boinc boinc     37140 May 27 16:38 runpilot2-wrapper.sh
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc       100 Jun  3 03:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:43:31] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 03:12 run_atlas
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc       105 Jun  3 03:12 job.xml
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc      6419 Jun  3 03:12 init_data.xml
[2025-06-03 07:43:31] -rw-r--r-- 2 boinc boinc 222573488 Jun  3 03:12 EVNT.44871834._002709.pool.root.1
[2025-06-03 07:43:31] drwxrwx--x 2 boinc boinc      4096 Jun  3 03:12 shared
[2025-06-03 07:43:31] -rw-r--r-- 2 boinc boinc    508880 Jun  3 03:12 input.tar.gz
[2025-06-03 07:43:31] -rw-r--r-- 2 boinc boinc     15093 Jun  3 03:12 start_atlas.sh
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc         0 Jun  3 03:12 boinc_lockfile
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc      2559 Jun  3 03:12 pandaJob.out
[2025-06-03 07:43:31] -rw------- 1 boinc boinc    988081 Jun  3 03:12 agis_schedconf.cvmfs.json
[2025-06-03 07:43:31] drwx------ 4 boinc boinc      4096 Jun  3 03:12 pilot3
[2025-06-03 07:43:31] -rw------- 1 boinc boinc 198821177 Jun  3 07:40 HITS.44871837._068874.pool.root.1
[2025-06-03 07:43:31] -rw------- 1 boinc boinc        95 Jun  3 07:40 pilot_heartbeat.json
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc       528 Jun  3 07:40 boinc_task_state.xml
[2025-06-03 07:43:31] -rw------- 1 boinc boinc      1037 Jun  3 07:40 memory_monitor_summary.json
[2025-06-03 07:43:31] -rw------- 1 boinc boinc   1603667 Jun  3 07:40 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:43:31] -rw------- 1 boinc boinc    344236 Jun  3 07:40 log.44871837._068874.job.log.tgz.1
[2025-06-03 07:43:31] -rw------- 1 boinc boinc      7747 Jun  3 07:40 heartbeat.json
[2025-06-03 07:43:31] -rw------- 1 boinc boinc      4552 Jun  3 07:41 pilotlog.txt
[2025-06-03 07:43:31] -rw------- 1 boinc boinc   1489128 Jun  3 07:41 log.44871837._068874.job.log.1
[2025-06-03 07:43:31] -rw------- 1 boinc boinc       357 Jun  3 07:41 output.list
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc       620 Jun  3 07:41 runtime_log
[2025-06-03 07:43:31] -rw------- 1 boinc boinc   1853440 Jun  3 07:41 result.tar.gz
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc      9026 Jun  3 07:41 runtime_log.err
[2025-06-03 07:43:31] -rw------- 1 boinc boinc       665 Jun  3 07:41 4YSNDmLdAe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlfZKDmj33Nom.diag
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc        26 Jun  3 07:43 wrapper_checkpoint.txt
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc      8192 Jun  3 07:43 boinc_mmap_file
[2025-06-03 07:43:31] -rw-r--r-- 1 boinc boinc     21009 Jun  3 07:43 stderr.txt
[2025-06-03 07:43:31] HITS file was successfully produced:
[2025-06-03 07:43:31] -rw------- 1 boinc boinc 198821177 Jun  3 07:40 shared/HITS.pool.root.1
[2025-06-03 07:43:31]  *** Contents of shared directory: ***
[2025-06-03 07:43:31] total 413860
[2025-06-03 07:43:31] -rw-r--r-- 2 boinc boinc 222573488 Jun  3 03:12 ATLAS.root_0
[2025-06-03 07:43:31] -rw-r--r-- 2 boinc boinc    508880 Jun  3 03:12 input.tar.gz
[2025-06-03 07:43:31] -rw-r--r-- 2 boinc boinc     15093 Jun  3 03:12 start_atlas.sh
[2025-06-03 07:43:31] -rw------- 1 boinc boinc 198821177 Jun  3 07:40 HITS.pool.root.1
[2025-06-03 07:43:31] -rw------- 1 boinc boinc   1853440 Jun  3 07:41 result.tar.gz
07:43:33 (1243347): run_atlas exited; CPU time 62218.263628
07:43:33 (1243347): called boinc_finish(0)

</stderr_txt>
]]>

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