Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:31:57 (4057867): wrapper (7.7.26015): starting
13:31:57 (4057867): wrapper: running run_atlas (--nthreads 12)
[2025-05-27 13:31:57] Arguments: --nthreads 12
[2025-05-27 13:31:57] Threads: 12
[2025-05-27 13:31:57] Checking for CVMFS
[2025-05-27 13:31:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 13:31:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 13:31:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 13:31:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 13:31:57] 2.11.5.0 2138057 12607 249260 146492 3 344 27463450 45568001 10579 130560 0 125901384 99.798 87229738 31031 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-27 13:31:57] CVMFS is ok
[2025-05-27 13:31:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 13:31:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 13:31:57] Further information can be found at the LHC@home message board.
[2025-05-27 13:31:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 13:31:57] Checking for apptainer binary...
[2025-05-27 13:31:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 13:31:57] Running /usr/bin/apptainer --version
[2025-05-27 13:31:57] apptainer version 1.4.0-1.el9
[2025-05-27 13:31:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 13:31:57] wns0049.triumf.lcg
[2025-05-27 13:31:57] apptainer works
[2025-05-27 13:31:57] Set ATHENA_PROC_NUMBER=12
[2025-05-27 13:31:57] Set ATHENA_CORE_NUMBER=12
[2025-05-27 13:31:57] Starting ATLAS job with PandaID=6667365418
[2025-05-27 13:31:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 13:35:02]  *** The last 200 lines of the pilot log: ***
[2025-05-27 13:35:02] 2025-05-27 20:34:46,093 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 13:35:02] 2025-05-27 20:34:46,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | WARNING  | found no stored workdir sizes
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | WARNING  | wrong length of table data, x=[1748377946.0], y=[905.0] (must be same and length>=4)
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | ..............................
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . Timing measurements:
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . get job = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . initial setup = 2 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . payload setup = 3 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . stage-in = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . payload execution = 13 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . stage-out = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . log creation = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | ..............................
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 13:35:02] 2025-05-27 20:34:46,096 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667365418/pilotlog.txt
[2025-05-27 13:35:02] 2025-05-27 20:34:46,105 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-27 13:35:02] - Log from pilotlog.txt -
[2025-05-27 13:35:02] 2025-05-27 20:34:46,093 | INFO     | extracted standard info from prmon json
[2025-05-27 13:35:02] 2025-05-27 20:34:46,093 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 13:35:02] 2025-05-27 20:34:46,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | WARNING  | found no stored workdir sizes
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | WARNING  | wrong length of table data, x=[1748377946.0], y=[905.0] (must be same and length>=4)
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | ..............................
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . Timing measurements:
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . get job = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . initial setup = 2 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . payload setup = 3 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . stage-in = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . payload execution = 13 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . stage-out = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . log creation = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | ..............................
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 13:35:02] 2025-05-27 20:34:46,096 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667365418/pilotlog.txt
[2025-05-27 13:35:02] 2025-05-27 20:34:46,105 | WARNING  | 
[2025-05-27 13:35:02] [begin log extracts]
[2025-05-27 13:35:02] - Log from pilotlog.txt -
[2025-05-27 13:35:02] 2025-05-27 20:34:46,093 | INFO     | extracted standard info from prmon json
[2025-05-27 13:35:02] 2025-05-27 20:34:46,093 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 13:35:02] 2025-05-27 20:34:46,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | WARNING  | found no stored workdir sizes
[2025-05-27 13:35:02] 2025-05-27 20:34:46,094 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | WARNING  | wrong length of table data, x=[1748377946.0], y=[905.0] (must be same and length>=4)
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | ..............................
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . Timing measurements:
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . get job = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . initial setup = 2 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . payload setup = 3 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . stage-in = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . payload execution = 13 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . stage-out = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | . log creation = 0 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | ..............................
[2025-05-27 13:35:02] 2025-05-27 20:34:46,095 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 13:35:02] 2025-05-27 20:34:46,096 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667365418/pilotlog.txt
[2025-05-27 13:35:02] [end log extracts]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,105 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-27 13:35:02] 2025-05-27 20:34:46,106 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-27 13:35:02] 2025-05-27 20:34:46,581 | INFO     | 
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | job summary report
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | --------------------------------------------------
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | PanDA job id: 6667365418
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | task id: 44871837
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-27 13:32:33,398 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | pilot state: failed 
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | transexitcode: 65
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | exeerrorcode: 65
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | exitcode: 65
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | cpuconsumptiontime: 15 s
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | nevents: 0
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | neventsw: 0
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | pid: 4068189
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | pgrp: 4068189
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | corecount: 12
[2025-05-27 13:35:02] 2025-05-27 20:34:46,582 | INFO     | event service: False
[2025-05-27 13:35:02] 2025-05-27 20:34:46,583 | INFO     | sizes: {0: 2405231, 3: 2405437, 11: 2405465, 21: 2428582, 23: 2432817, 25: 2432845, 147: 2433115}
[2025-05-27 13:35:02] 2025-05-27 20:34:46,583 | INFO     | --------------------------------------------------
[2025-05-27 13:35:02] 2025-05-27 20:34:46,583 | INFO     | 
[2025-05-27 13:35:02] 2025-05-27 20:34:46,583 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-27 13:35:02] 2025-05-27 20:34:46,783 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,785 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 13:35:02] 2025-05-27 20:34:46,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,785 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 13:35:02] 2025-05-27 20:34:46,785 | INFO     | job 6667365418 has completed (purged errors)
[2025-05-27 13:35:02] 2025-05-27 20:34:46,785 | INFO     | overall cleanup function is called
[2025-05-27 13:35:02] 2025-05-27 20:34:47,791 | INFO     | --- collectZombieJob: --- 10, [4068189]
[2025-05-27 13:35:02] 2025-05-27 20:34:47,792 | INFO     | zombie collector waiting for pid 4068189
[2025-05-27 13:35:02] 2025-05-27 20:34:47,792 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 13:35:02] 2025-05-27 20:34:47,792 | INFO     | collected zombie processes
[2025-05-27 13:35:02] 2025-05-27 20:34:47,792 | INFO     | will attempt to kill all subprocesses of pid=4068189
[2025-05-27 13:35:02] 2025-05-27 20:34:47,930 | INFO     | process IDs to be killed: [4068189] (in reverse order)
[2025-05-27 13:35:02] 2025-05-27 20:34:47,983 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 13:35:02] 2025-05-27 20:34:47,984 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 13:35:02] 2025-05-27 20:34:47,989 | INFO     | did not find any defunct processes belonging to 4068189
[2025-05-27 13:35:02] 2025-05-27 20:34:47,995 | INFO     | did not find any defunct processes belonging to 4068189
[2025-05-27 13:35:02] 2025-05-27 20:34:47,995 | INFO     | ready for new job
[2025-05-27 13:35:02] 2025-05-27 20:34:47,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 13:35:02] 2025-05-27 20:34:47,997 | INFO     | **************************************
[2025-05-27 13:35:02] 2025-05-27 20:34:47,997 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 13:35:02] 2025-05-27 20:34:47,997 | INFO     | **************************************
[2025-05-27 13:35:02] 2025-05-27 20:34:47,997 | INFO     | 
[2025-05-27 13:35:02] 2025-05-27 20:34:47,999 | INFO     | architecture information:
[2025-05-27 13:35:02] 2025-05-27 20:34:47,999 | INFO     | executing command: cat /etc/os-release
[2025-05-27 13:35:02] 2025-05-27 20:34:48,009 | INFO     | cat /etc/os-release:
[2025-05-27 13:35:02] NAME="CentOS Linux"
[2025-05-27 13:35:02] VERSION="7 (Core)"
[2025-05-27 13:35:02] ID="centos"
[2025-05-27 13:35:02] ID_LIKE="rhel fedora"
[2025-05-27 13:35:02] VERSION_ID="7"
[2025-05-27 13:35:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 13:35:02] ANSI_COLOR="0;31"
[2025-05-27 13:35:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 13:35:02] HOME_URL="https://www.centos.org/"
[2025-05-27 13:35:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 13:35:02] 
[2025-05-27 13:35:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 13:35:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 13:35:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 13:35:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 13:35:02] 
[2025-05-27 13:35:02] 2025-05-27 20:34:48,009 | INFO     | **************************************
[2025-05-27 13:35:02] 2025-05-27 20:34:48,513 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-27 13:35:02] 2025-05-27 20:34:48,542 | INFO     | sufficient remaining disk space (1855668092928 B)
[2025-05-27 13:35:02] 2025-05-27 20:34:48,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 13:35:02] 2025-05-27 20:34:48,542 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 13:35:02] 2025-05-27 20:34:48,542 | INFO     | update_server=False
[2025-05-27 13:35:02] 2025-05-27 20:34:48,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 13:35:02] 2025-05-27 20:34:48,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 13:35:02] 2025-05-27 20:34:48,552 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 13:35:02] 2025-05-27 20:34:48,553 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 13:35:02] 2025-05-27 20:34:48,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 13:35:02] 2025-05-27 20:34:48,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 13:35:02] 2025-05-27 20:34:48,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 13:35:02] 2025-05-27 20:34:48,556 | INFO     | aborting loop
[2025-05-27 13:35:02] 2025-05-27 20:34:48,739 | INFO     | all data control threads have been joined
[2025-05-27 13:35:02] 2025-05-27 20:34:49,205 | INFO     | all job control threads have been joined
[2025-05-27 13:35:02] 2025-05-27 20:34:49,462 | INFO     | all payload control threads have been joined
[2025-05-27 13:35:02] 2025-05-27 20:34:49,548 | INFO     | [job] retrieve thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:49,560 | INFO     | [job] job monitor thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:49,573 | INFO     | [payload] failed_post thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:49,715 | INFO     | [payload] validate_post thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:49,745 | INFO     | [data] control thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:49,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:50,211 | INFO     | [job] control thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:50,471 | INFO     | [payload] control thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:50,479 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:50,561 | INFO     | [data] copytool_out thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:50,625 | INFO     | [job] validate thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:50,657 | INFO     | [data] copytool_in thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:50,771 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:50,880 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:51,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 13:35:02] 2025-05-27 20:34:51,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 13:35:02] 2025-05-27 20:34:52,191 | INFO     | [job] queue monitor thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:55,356 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 13:35:02] 2025-05-27 20:34:56,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114090723136)>', '<ExcThread(monitor, started 140113552066304)>']
[2025-05-27 13:35:02] 2025-05-27 20:34:57,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 13:35:02] 2025-05-27 20:34:57,604 | INFO     | [monitor] control thread has ended
[2025-05-27 13:35:02] 2025-05-27 20:35:01,882 | INFO     | all workflow threads have been joined
[2025-05-27 13:35:02] 2025-05-27 20:35:01,883 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 13:35:02] 2025-05-27 20:35:01,883 | INFO     | traces error code: 0
[2025-05-27 13:35:02] 2025-05-27 20:35:01,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 13:35:02] 2025-05-27 20:35:02,021 [wrapper] ==== pilot stdout END ====
[2025-05-27 13:35:02] 2025-05-27 20:35:02,023 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 13:35:02] 2025-05-27 20:35:02,025 [wrapper] pilotpid: 4061525
[2025-05-27 13:35:02] 2025-05-27 20:35:02,027 [wrapper] Pilot exit status: 0
[2025-05-27 13:35:02] 2025-05-27 20:35:02,117 [wrapper] pandaids: 6667365418
[2025-05-27 13:35:02] 2025-05-27 20:35:02,253 [wrapper] cleanup supervisor_pilot 4061531 4061526
[2025-05-27 13:35:02] 2025-05-27 20:35:02,255 [wrapper] Test setup, not cleaning
[2025-05-27 13:35:02] 2025-05-27 20:35:02,257 [wrapper] apfmon messages muted
[2025-05-27 13:35:02] 2025-05-27 20:35:02,259 [wrapper] ==== wrapper stdout END ====
[2025-05-27 13:35:02] 2025-05-27 20:35:02,261 [wrapper] ==== wrapper stderr END ====
[2025-05-27 13:35:02]  *** Error codes and diagnostics ***
[2025-05-27 13:35:02]     "exeErrorCode": 65,
[2025-05-27 13:35:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 13:35:02]     "pilotErrorCode": 1305,
[2025-05-27 13:35:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 13:35:02]  *** Listing of results directory ***
[2025-05-27 13:35:02] total 221164
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc    495897 May 27 09:39 pilot3.tar.gz
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc      5111 May 27 10:25 queuedata.json
[2025-05-27 13:35:02] -rwx------. 1 boinc boinc     37140 May 27 10:30 runpilot2-wrapper.sh
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc       100 May 27 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 13:35:02] -rwxr-xr-x. 1 boinc boinc      7986 May 27 13:31 run_atlas
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc       105 May 27 13:31 job.xml
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc      6601 May 27 13:31 init_data.xml
[2025-05-27 13:35:02] -rw-r--r--. 2 boinc boinc 222450155 May 27 13:31 EVNT.44871834._002789.pool.root.1
[2025-05-27 13:35:02] -rw-r--r--. 2 boinc boinc     15093 May 27 13:31 start_atlas.sh
[2025-05-27 13:35:02] drwxrwx--x. 2 boinc boinc      4096 May 27 13:31 shared
[2025-05-27 13:35:02] -rw-r--r--. 2 boinc boinc    508876 May 27 13:31 input.tar.gz
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc         0 May 27 13:31 boinc_lockfile
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc      2559 May 27 13:31 pandaJob.out
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc    991111 May 27 13:32 agis_schedconf.cvmfs.json
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc   1603667 May 27 13:32 agis_ddmendpoints.agis.ALL.json
[2025-05-27 13:35:02] drwx------. 4 boinc boinc      4096 May 27 13:32 pilot3
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc       522 May 27 13:32 boinc_task_state.xml
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc       971 May 27 13:32 memory_monitor_summary.json
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc     20413 May 27 13:32 log.44871837._071002.job.log.tgz.1
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc        95 May 27 13:34 pilot_heartbeat.json
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc      8329 May 27 13:34 heartbeat.json
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc      4475 May 27 13:35 pilotlog.txt
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc      8192 May 27 13:35 boinc_mmap_file
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc     73662 May 27 13:35 log.44871837._071002.job.log.1
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc        22 May 27 13:35 wrapper_checkpoint.txt
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc       188 May 27 13:35 output.list
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc       620 May 27 13:35 runtime_log
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc    112640 May 27 13:35 result.tar.gz
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc       644 May 27 13:35 Sc6LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBSKDmC23VHm.diag
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc      8484 May 27 13:35 runtime_log.err
[2025-05-27 13:35:02] -rw-r--r--. 1 boinc boinc     21481 May 27 13:35 stderr.txt
[2025-05-27 13:35:02] No HITS result produced
[2025-05-27 13:35:02]  *** Contents of shared directory: ***
[2025-05-27 13:35:02] total 217868
[2025-05-27 13:35:02] -rw-r--r--. 2 boinc boinc 222450155 May 27 13:31 ATLAS.root_0
[2025-05-27 13:35:02] -rw-r--r--. 2 boinc boinc     15093 May 27 13:31 start_atlas.sh
[2025-05-27 13:35:02] -rw-r--r--. 2 boinc boinc    508876 May 27 13:31 input.tar.gz
[2025-05-27 13:35:02] -rw-------. 1 boinc boinc    112640 May 27 13:35 result.tar.gz
13:35:04 (4057867): run_atlas exited; CPU time 18.257322
13:35:04 (4057867): called boinc_finish(0)

</stderr_txt>
]]>

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