Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:15:42 (1317069): wrapper (7.7.26015): starting
04:15:42 (1317069): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 04:15:42] Arguments: --nthreads 4
[2025-06-03 04:15:42] Threads: 4
[2025-06-03 04:15:42] Checking for CVMFS
[2025-06-03 04:15:42] No cvmfs_config command found, will try listing directly
[2025-06-03 04:15:42] CVMFS is ok
[2025-06-03 04:15:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 04:15:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 04:15:42] Further information can be found at the LHC@home message board.
[2025-06-03 04:15:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:15:42] Checking for apptainer binary...
[2025-06-03 04:15:42] which: no apptainer in ((null))
[2025-06-03 04:15:42] apptainer is not installed, using version from CVMFS
[2025-06-03 04:15:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:15:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-03 04:15:42] apptainer works
[2025-06-03 04:15:42] Set ATHENA_PROC_NUMBER=4
[2025-06-03 04:15:42] Set ATHENA_CORE_NUMBER=4
[2025-06-03 04:15:42] Starting ATLAS job with PandaID=6666850949
[2025-06-03 04:15:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:56:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:56:20] 2025-06-03 06:54:55,786 | INFO     | PID=1320676 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 08:56:20] 2025-06-03 06:54:55,786 | INFO     | .. there are 3 such processes running
[2025-06-03 08:56:20] 2025-06-03 06:54:57,345 | INFO     | monitor loop #1221: job 0:6666850949 is in state 'finished'
[2025-06-03 08:56:20] 2025-06-03 06:54:57,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:56:20] 2025-06-03 06:54:59,799 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 08:56:20] 2025-06-03 06:54:59,799 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6666850949/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:56:20] 2025-06-03 06:54:59,800 | INFO     | extracted standard info from prmon json
[2025-06-03 08:56:20] 2025-06-03 06:54:59,800 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:56:20] 2025-06-03 06:54:59,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:56:20] 2025-06-03 06:54:59,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:56:20] 2025-06-03 06:54:59,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:56:20] 2025-06-03 06:54:59,806 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:56:20] 2025-06-03 06:54:59,807 | INFO     | sum of square deviations: 6378584712.5
[2025-06-03 08:56:20] 2025-06-03 06:54:59,809 | INFO     | sum of deviations: -30328075708.99999
[2025-06-03 08:56:20] 2025-06-03 06:54:59,809 | INFO     | mean x: 1748925303.5
[2025-06-03 08:56:20] 2025-06-03 06:54:59,810 | INFO     | mean y: 2390148.9489051094
[2025-06-03 08:56:20] 2025-06-03 06:54:59,810 | INFO     | -- intersect: 8317955655.195019
[2025-06-03 08:56:20] 2025-06-03 06:54:59,810 | INFO     | intersect: 8317955655.195019
[2025-06-03 08:56:20] 2025-06-03 06:54:59,810 | INFO     | chi2: 1.5781927595477048
[2025-06-03 08:56:20] 2025-06-03 06:54:59,811 | INFO     | sum of square deviations: 6035722470.0
[2025-06-03 08:56:20] 2025-06-03 06:54:59,813 | INFO     | sum of deviations: -28716011628.999996
[2025-06-03 08:56:20] 2025-06-03 06:54:59,813 | INFO     | mean x: 1748925151.0
[2025-06-03 08:56:20] 2025-06-03 06:54:59,814 | INFO     | mean y: 2390866.0483271377
[2025-06-03 08:56:20] 2025-06-03 06:54:59,814 | INFO     | -- intersect: 8323209993.168758
[2025-06-03 08:56:20] 2025-06-03 06:54:59,814 | INFO     | intersect: 8323209993.168758
[2025-06-03 08:56:20] 2025-06-03 06:54:59,814 | INFO     | chi2: 1.5781723863337602
[2025-06-03 08:56:20] 2025-06-03 06:54:59,815 | INFO     | current chi2=1.5781723863337602 (change=0.001290920505197698 %)
[2025-06-03 08:56:20] 2025-06-03 06:54:59,815 | INFO     | right removable region: 268
[2025-06-03 08:56:20] 2025-06-03 06:54:59,815 | INFO     | sum of square deviations: 6035722470.0
[2025-06-03 08:56:20] 2025-06-03 06:54:59,817 | INFO     | sum of deviations: -70118829793.00002
[2025-06-03 08:56:20] 2025-06-03 06:54:59,817 | INFO     | mean x: 1748925456.0
[2025-06-03 08:56:20] 2025-06-03 06:54:59,818 | INFO     | mean y: 2407696.4869888476
[2025-06-03 08:56:20] 2025-06-03 06:54:59,818 | INFO     | -- intersect: 20320208420.33454
[2025-06-03 08:56:20] 2025-06-03 06:54:59,818 | INFO     | intersect: 20320208420.33454
[2025-06-03 08:56:20] 2025-06-03 06:54:59,818 | INFO     | chi2: 0.10867431000264006
[2025-06-03 08:56:20] 2025-06-03 06:54:59,819 | INFO     | current chi2=0.10867431000264006 (change=93.11400275123647 %)
[2025-06-03 08:56:20] 2025-06-03 06:54:59,819 | INFO     | sum of square deviations: 5705372090.0
[2025-06-03 08:56:20] 2025-06-03 06:54:59,821 | INFO     | sum of deviations: -69464519514.99998
[2025-06-03 08:56:20] 2025-06-03 06:54:59,821 | INFO     | mean x: 1748925608.5
[2025-06-03 08:56:20] 2025-06-03 06:54:59,822 | INFO     | mean y: 2407398.9015151514
[2025-06-03 08:56:20] 2025-06-03 06:54:59,822 | INFO     | -- intersect: 21296071536.051853
[2025-06-03 08:56:20] 2025-06-03 06:54:59,822 | INFO     | intersect: 21296071536.051853
[2025-06-03 08:56:20] 2025-06-03 06:54:59,822 | INFO     | chi2: 0.09806596246303664
[2025-06-03 08:56:20] 2025-06-03 06:54:59,822 | INFO     | current chi2=0.09806596246303664 (change=9.761596406129202 %)
[2025-06-03 08:56:20] 2025-06-03 06:54:59,823 | INFO     | left removable region: 20
[2025-06-03 08:56:20] 2025-06-03 06:54:59,823 | INFO     | sum of square deviations: 4729621702.0
[2025-06-03 08:56:20] 2025-06-03 06:54:59,825 | INFO     | sum of deviations: -61375825727.49999
[2025-06-03 08:56:20] 2025-06-03 06:54:59,825 | INFO     | mean x: 1748925730.5
[2025-06-03 08:56:20] 2025-06-03 06:54:59,825 | INFO     | mean y: 2405951.9717741935
[2025-06-03 08:56:20] 2025-06-03 06:54:59,825 | INFO     | -- intersect: 22698039473.806587
[2025-06-03 08:56:20] 2025-06-03 06:54:59,826 | INFO     | intersect: 22698039473.806587
[2025-06-03 08:56:20] 2025-06-03 06:54:59,826 | INFO     | chi2: 0.09397704304139856
[2025-06-03 08:56:20] 2025-06-03 06:54:59,826 | INFO     | -- intersect: 22698039473.806587
[2025-06-03 08:56:20] 2025-06-03 06:54:59,826 | INFO     | current memory leak: -12.98 B/s (using 248 data points, chi2=0.09)
[2025-06-03 08:56:20] 2025-06-03 06:54:59,827 | INFO     | ..............................
[2025-06-03 08:56:20] 2025-06-03 06:54:59,827 | INFO     | . Timing measurements:
[2025-06-03 08:56:20] 2025-06-03 06:54:59,827 | INFO     | . get job = 0 s
[2025-06-03 08:56:20] 2025-06-03 06:54:59,827 | INFO     | . initial setup = 1 s
[2025-06-03 08:56:20] 2025-06-03 06:54:59,827 | INFO     | . payload setup = 6 s
[2025-06-03 08:56:20] 2025-06-03 06:54:59,828 | INFO     | . stage-in = 0 s
[2025-06-03 08:56:20] 2025-06-03 06:54:59,828 | INFO     | . payload execution = 16710 s
[2025-06-03 08:56:20] 2025-06-03 06:54:59,828 | INFO     | . stage-out = 1 s
[2025-06-03 08:56:20] 2025-06-03 06:54:59,828 | INFO     | . log creation = 0 s
[2025-06-03 08:56:20] 2025-06-03 06:54:59,828 | INFO     | ..............................
[2025-06-03 08:56:20] 2025-06-03 06:55:00,220 | INFO     | 
[2025-06-03 08:56:20] 2025-06-03 06:55:00,221 | INFO     | job summary report
[2025-06-03 08:56:20] 2025-06-03 06:55:00,221 | INFO     | --------------------------------------------------
[2025-06-03 08:56:20] 2025-06-03 06:55:00,221 | INFO     | PanDA job id: 6666850949
[2025-06-03 08:56:20] 2025-06-03 06:55:00,221 | INFO     | task id: 44871837
[2025-06-03 08:56:20] 2025-06-03 06:55:00,221 | INFO     | errors: (none)
[2025-06-03 08:56:20] 2025-06-03 06:55:00,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:56:20] 2025-06-03 06:55:00,221 | INFO     | pilot state: finished 
[2025-06-03 08:56:20] 2025-06-03 06:55:00,221 | INFO     | transexitcode: 0
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | exeerrorcode: 0
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | exeerrordiag: 
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | exitcode: 0
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | exitmsg: OK
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | cpuconsumptiontime: 63790 s
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | nevents: 400
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | neventsw: 0
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | pid: 1327544
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | pgrp: 1327544
[2025-06-03 08:56:20] 2025-06-03 06:55:00,222 | INFO     | corecount: 4
[2025-06-03 08:56:20] 2025-06-03 06:55:00,223 | INFO     | event service: False
[2025-06-03 08:56:20] 2025-06-03 06:55:00,223 | INFO     | sizes: {0: 2405194, 4: 2405400, 11: 2405428, 16720: 2436999, 16722: 2445990, 16726: 2446046, 16733: 2446344}
[2025-06-03 08:56:20] 2025-06-03 06:55:00,223 | INFO     | --------------------------------------------------
[2025-06-03 08:56:20] 2025-06-03 06:55:00,223 | INFO     | 
[2025-06-03 08:56:20] 2025-06-03 06:55:00,223 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-03 08:56:20] 2025-06-03 06:55:00,243 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,244 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,244 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,244 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,244 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,245 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,245 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,245 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,245 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:56:20] 2025-06-03 06:55:00,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,246 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:56:20] 2025-06-03 06:55:00,247 | INFO     | job 6666850949 has completed (purged errors)
[2025-06-03 08:56:20] 2025-06-03 06:55:00,247 | INFO     | overall cleanup function is called
[2025-06-03 08:56:20] 2025-06-03 06:55:01,255 | INFO     | --- collectZombieJob: --- 10, [1327544]
[2025-06-03 08:56:20] 2025-06-03 06:55:01,255 | INFO     | zombie collector waiting for pid 1327544
[2025-06-03 08:56:20] 2025-06-03 06:55:01,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:56:20] 2025-06-03 06:55:01,255 | INFO     | collected zombie processes
[2025-06-03 08:56:20] 2025-06-03 06:55:01,256 | INFO     | will attempt to kill all subprocesses of pid=1327544
[2025-06-03 08:56:20] 2025-06-03 06:55:01,568 | INFO     | process IDs to be killed: [1327544] (in reverse order)
[2025-06-03 08:56:20] 2025-06-03 06:55:01,642 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:56:20] 2025-06-03 06:55:01,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:56:20] 2025-06-03 06:55:01,650 | INFO     | did not find any defunct processes belonging to 1327544
[2025-06-03 08:56:20] 2025-06-03 06:55:01,658 | INFO     | did not find any defunct processes belonging to 1327544
[2025-06-03 08:56:20] 2025-06-03 06:55:01,658 | INFO     | ready for new job
[2025-06-03 08:56:20] 2025-06-03 06:55:01,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:56:20] 2025-06-03 06:55:01,660 | INFO     | **************************************
[2025-06-03 08:56:20] 2025-06-03 06:55:01,660 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:56:20] 2025-06-03 06:55:01,660 | INFO     | **************************************
[2025-06-03 08:56:20] 2025-06-03 06:55:01,660 | INFO     | 
[2025-06-03 08:56:20] 2025-06-03 06:55:01,663 | INFO     | architecture information:
[2025-06-03 08:56:20] 2025-06-03 06:55:01,663 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:56:20] 2025-06-03 06:55:01,675 | INFO     | cat /etc/os-release:
[2025-06-03 08:56:20] NAME="CentOS Linux"
[2025-06-03 08:56:20] VERSION="7 (Core)"
[2025-06-03 08:56:20] ID="centos"
[2025-06-03 08:56:20] ID_LIKE="rhel fedora"
[2025-06-03 08:56:20] VERSION_ID="7"
[2025-06-03 08:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:56:20] ANSI_COLOR="0;31"
[2025-06-03 08:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:56:20] HOME_URL="https://www.centos.org/"
[2025-06-03 08:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:56:20] 
[2025-06-03 08:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:56:20] 
[2025-06-03 08:56:20] 2025-06-03 06:55:01,676 | INFO     | **************************************
[2025-06-03 08:56:20] 2025-06-03 06:55:02,178 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-03 08:56:20] 2025-06-03 06:55:02,192 | INFO     | sufficient remaining disk space (1635533193216 B)
[2025-06-03 08:56:20] 2025-06-03 06:55:02,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:56:20] 2025-06-03 06:55:02,192 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:56:20] 2025-06-03 06:55:02,193 | INFO     | update_server=False
[2025-06-03 08:56:20] 2025-06-03 06:55:02,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:56:20] 2025-06-03 06:55:02,193 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 08:56:20] 2025-06-03 06:55:02,193 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:56:20] 2025-06-03 06:55:02,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:56:20] 2025-06-03 06:55:02,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:56:20] 2025-06-03 06:55:02,218 | INFO     | all data control threads have been joined
[2025-06-03 08:56:20] 2025-06-03 06:55:02,350 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 08:56:20] 2025-06-03 06:55:02,350 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 08:56:20] 2025-06-03 06:55:02,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:56:20] 2025-06-03 06:55:02,350 | INFO     | will abort loop
[2025-06-03 08:56:20] 2025-06-03 06:55:02,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:56:20] 2025-06-03 06:55:02,893 | INFO     | all job control threads have been joined
[2025-06-03 08:56:20] 2025-06-03 06:55:03,198 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:03,223 | INFO     | [data] control thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:03,356 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:03,356 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:03,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:56:20] 2025-06-03 06:55:03,555 | INFO     | all payload control threads have been joined
[2025-06-03 08:56:20] 2025-06-03 06:55:03,898 | INFO     | [job] control thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:03,994 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:04,122 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:04,224 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:04,394 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:04,408 | INFO     | [job] validate thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:04,491 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:04,515 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:04,560 | INFO     | [payload] control thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:04,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:56:20] 2025-06-03 06:55:05,965 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:07,431 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:12,542 | INFO     | job.realtimelogging is not enabled
[2025-06-03 08:56:20] 2025-06-03 06:55:13,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:56:20] 2025-06-03 06:55:14,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22699354490688)>', '<ExcThread(monitor, started 22698226865920)>']
[2025-06-03 08:56:20] 2025-06-03 06:55:15,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:56:20] 2025-06-03 06:55:15,258 | INFO     | [monitor] control thread has ended
[2025-06-03 08:56:20] 2025-06-03 06:55:19,840 | INFO     | all workflow threads have been joined
[2025-06-03 08:56:20] 2025-06-03 06:55:19,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:56:20] 2025-06-03 06:55:19,840 | INFO     | traces error code: 0
[2025-06-03 08:56:20] 2025-06-03 06:55:19,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:56:20] 2025-06-03 06:55:19,972 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:56:20] 2025-06-03 06:55:19,975 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:56:20] 2025-06-03 06:55:19,977 [wrapper] pilotpid: 1320676
[2025-06-03 08:56:20] 2025-06-03 06:55:19,980 [wrapper] Pilot exit status: 0
[2025-06-03 08:56:20] 2025-06-03 06:55:19,989 [wrapper] pandaids: 6666850949
[2025-06-03 08:56:20] 2025-06-03 06:55:20,044 [wrapper] cleanup supervisor_pilot 1632603 1320677
[2025-06-03 08:56:20] 2025-06-03 06:55:20,046 [wrapper] Test setup, not cleaning
[2025-06-03 08:56:20] 2025-06-03 06:55:20,049 [wrapper] apfmon messages muted
[2025-06-03 08:56:20] 2025-06-03 06:55:20,051 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:56:20] 2025-06-03 06:55:20,054 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:56:20]  *** Error codes and diagnostics ***
[2025-06-03 08:56:20]     "exeErrorCode": 0,
[2025-06-03 08:56:20]     "exeErrorDiag": "",
[2025-06-03 08:56:20]     "pilotErrorCode": 0,
[2025-06-03 08:56:20]     "pilotErrorDiag": "",
[2025-06-03 08:56:20]  *** Listing of results directory ***
[2025-06-03 08:56:20] total 419060
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc    495897 May 27 10:13 pilot3.tar.gz
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc      5111 May 27 11:03 queuedata.json
[2025-06-03 08:56:20] -rwx------ 1 boinc boinc     37140 May 27 11:08 runpilot2-wrapper.sh
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc       100 Jun  3 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:56:20] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 04:15 run_atlas
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc       105 Jun  3 04:15 job.xml
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc      6419 Jun  3 04:15 init_data.xml
[2025-06-03 08:56:20] -rw-r--r-- 2 boinc boinc 222982094 Jun  3 04:15 EVNT.44871834._002562.pool.root.1
[2025-06-03 08:56:20] drwxrwx--x 2 boinc boinc      4096 Jun  3 04:15 shared
[2025-06-03 08:56:20] -rw-r--r-- 2 boinc boinc    508880 Jun  3 04:15 input.tar.gz
[2025-06-03 08:56:20] -rw-r--r-- 2 boinc boinc     15093 Jun  3 04:15 start_atlas.sh
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc         0 Jun  3 04:15 boinc_lockfile
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc      2558 Jun  3 04:15 pandaJob.out
[2025-06-03 08:56:20] -rw------- 1 boinc boinc    988073 Jun  3 04:15 agis_schedconf.cvmfs.json
[2025-06-03 08:56:20] drwx------ 4 boinc boinc      4096 Jun  3 04:15 pilot3
[2025-06-03 08:56:20] -rw------- 1 boinc boinc 198457817 Jun  3 08:54 HITS.44871837._065010.pool.root.1
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc       528 Jun  3 08:54 boinc_task_state.xml
[2025-06-03 08:56:20] -rw------- 1 boinc boinc        95 Jun  3 08:54 pilot_heartbeat.json
[2025-06-03 08:56:20] -rw------- 1 boinc boinc      1038 Jun  3 08:54 memory_monitor_summary.json
[2025-06-03 08:56:20] -rw------- 1 boinc boinc   1603667 Jun  3 08:54 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:56:20] -rw------- 1 boinc boinc    364967 Jun  3 08:54 log.44871837._065010.job.log.tgz.1
[2025-06-03 08:56:20] -rw------- 1 boinc boinc      7733 Jun  3 08:54 heartbeat.json
[2025-06-03 08:56:20] -rw------- 1 boinc boinc      4745 Jun  3 08:55 pilotlog.txt
[2025-06-03 08:56:20] -rw------- 1 boinc boinc   1552583 Jun  3 08:55 log.44871837._065010.job.log.1
[2025-06-03 08:56:20] -rw------- 1 boinc boinc       357 Jun  3 08:55 output.list
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc       620 Jun  3 08:55 runtime_log
[2025-06-03 08:56:20] -rw------- 1 boinc boinc   1935360 Jun  3 08:55 result.tar.gz
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc      9026 Jun  3 08:55 runtime_log.err
[2025-06-03 08:56:20] -rw------- 1 boinc boinc       666 Jun  3 08:55 QNLLDmBT5d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmc0YKDm6IGJIn.diag
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc        26 Jun  3 08:56 wrapper_checkpoint.txt
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc      8192 Jun  3 08:56 boinc_mmap_file
[2025-06-03 08:56:20] -rw-r--r-- 1 boinc boinc     20914 Jun  3 08:56 stderr.txt
[2025-06-03 08:56:20] HITS file was successfully produced:
[2025-06-03 08:56:20] -rw------- 1 boinc boinc 198457817 Jun  3 08:54 shared/HITS.pool.root.1
[2025-06-03 08:56:20]  *** Contents of shared directory: ***
[2025-06-03 08:56:20] total 413980
[2025-06-03 08:56:20] -rw-r--r-- 2 boinc boinc 222982094 Jun  3 04:15 ATLAS.root_0
[2025-06-03 08:56:20] -rw-r--r-- 2 boinc boinc    508880 Jun  3 04:15 input.tar.gz
[2025-06-03 08:56:20] -rw-r--r-- 2 boinc boinc     15093 Jun  3 04:15 start_atlas.sh
[2025-06-03 08:56:20] -rw------- 1 boinc boinc 198457817 Jun  3 08:54 HITS.pool.root.1
[2025-06-03 08:56:20] -rw------- 1 boinc boinc   1935360 Jun  3 08:55 result.tar.gz
08:56:22 (1317069): run_atlas exited; CPU time 64447.979916
08:56:22 (1317069): called boinc_finish(0)

</stderr_txt>
]]>

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