Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:42:01 (1978516): wrapper (7.7.26015): starting
04:42:01 (1978516): wrapper: running run_atlas (--nthreads 4)
[2025-05-30 04:42:01] Arguments: --nthreads 4
[2025-05-30 04:42:01] Threads: 4
[2025-05-30 04:42:01] Checking for CVMFS
[2025-05-30 04:42:01] No cvmfs_config command found, will try listing directly
[2025-05-30 04:42:01] CVMFS is ok
[2025-05-30 04:42:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 04:42:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 04:42:01] Further information can be found at the LHC@home message board.
[2025-05-30 04:42:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 04:42:01] Checking for apptainer binary...
[2025-05-30 04:42:01] which: no apptainer in ((null))
[2025-05-30 04:42:01] apptainer is not installed, using version from CVMFS
[2025-05-30 04:42:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 04:42:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-05-30 04:42:01] apptainer works
[2025-05-30 04:42:01] Set ATHENA_PROC_NUMBER=4
[2025-05-30 04:42:01] Set ATHENA_CORE_NUMBER=4
[2025-05-30 04:42:01] Starting ATLAS job with PandaID=6667098639
[2025-05-30 04:42:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 07:09:02]  *** The last 200 lines of the pilot log: ***
[2025-05-30 07:09:02] 2025-05-30 05:08:46,200 | INFO     | job 6667098639 has finished - writing final server update
[2025-05-30 07:09:02] 2025-05-30 05:08:46,200 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1639118/.job.ad'
[2025-05-30 07:09:02] 2025-05-30 05:08:46,200 | INFO     | total number of processed events: 400 (read)
[2025-05-30 07:09:02] 2025-05-30 05:08:46,204 | INFO     | executing command: lscpu
[2025-05-30 07:09:02] 2025-05-30 05:08:46,264 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-30 07:09:02] 2025-05-30 05:08:48,539 | INFO     | monitor loop #655: job 0:6667098639 is in state 'finished'
[2025-05-30 07:09:02] 2025-05-30 05:08:48,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 07:09:02] 2025-05-30 05:08:49,472 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-30 07:09:02] 2025-05-30 05:08:49,473 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6667098639/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 07:09:02] 2025-05-30 05:08:49,474 | INFO     | extracted standard info from prmon json
[2025-05-30 07:09:02] 2025-05-30 05:08:49,474 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 07:09:02] 2025-05-30 05:08:49,474 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 07:09:02] 2025-05-30 05:08:49,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 07:09:02] 2025-05-30 05:08:49,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 07:09:02] 2025-05-30 05:08:49,477 | INFO     | fitting pss+swap vs Time
[2025-05-30 07:09:02] 2025-05-30 05:08:49,478 | INFO     | sum of square deviations: 925859220.0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,478 | INFO     | sum of deviations: 5908044254.499999
[2025-05-30 07:09:02] 2025-05-30 05:08:49,478 | INFO     | mean x: 1748577313.5
[2025-05-30 07:09:02] 2025-05-30 05:08:49,479 | INFO     | mean y: 2333308.5208333335
[2025-05-30 07:09:02] 2025-05-30 05:08:49,479 | INFO     | -- intersect: -11155596458.137125
[2025-05-30 07:09:02] 2025-05-30 05:08:49,479 | INFO     | intersect: -11155596458.137125
[2025-05-30 07:09:02] 2025-05-30 05:08:49,479 | INFO     | chi2: 1.533734194965872
[2025-05-30 07:09:02] 2025-05-30 05:08:49,479 | INFO     | sum of square deviations: 832722590.0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,480 | INFO     | sum of deviations: 5770269014.000005
[2025-05-30 07:09:02] 2025-05-30 05:08:49,480 | INFO     | mean x: 1748577161.0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,480 | INFO     | mean y: 2333082.841726619
[2025-05-30 07:09:02] 2025-05-30 05:08:49,480 | INFO     | -- intersect: -12114259803.999973
[2025-05-30 07:09:02] 2025-05-30 05:08:49,480 | INFO     | intersect: -12114259803.999973
[2025-05-30 07:09:02] 2025-05-30 05:08:49,481 | INFO     | chi2: 1.5352115250688438
[2025-05-30 07:09:02] 2025-05-30 05:08:49,481 | INFO     | current chi2=1.5352115250688438 (change=-0.09632243369293006 %)
[2025-05-30 07:09:02] 2025-05-30 05:08:49,481 | INFO     | right removable region: 138
[2025-05-30 07:09:02] 2025-05-30 05:08:49,481 | INFO     | sum of square deviations: 832722590.0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,482 | INFO     | sum of deviations: -13675811674.000002
[2025-05-30 07:09:02] 2025-05-30 05:08:49,482 | INFO     | mean x: 1748577466.0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,482 | INFO     | mean y: 2364815.151079137
[2025-05-30 07:09:02] 2025-05-30 05:08:49,482 | INFO     | -- intersect: 28719270552.530125
[2025-05-30 07:09:02] 2025-05-30 05:08:49,482 | INFO     | intersect: 28719270552.530125
[2025-05-30 07:09:02] 2025-05-30 05:08:49,482 | INFO     | chi2: 0.0588178435766497
[2025-05-30 07:09:02] 2025-05-30 05:08:49,482 | INFO     | current chi2=0.0588178435766497 (change=96.16505625487743 %)
[2025-05-30 07:09:02] 2025-05-30 05:08:49,483 | INFO     | sum of square deviations: 746051197.5
[2025-05-30 07:09:02] 2025-05-30 05:08:49,483 | INFO     | sum of deviations: -11542152149.000002
[2025-05-30 07:09:02] 2025-05-30 05:08:49,483 | INFO     | mean x: 1748577618.5
[2025-05-30 07:09:02] 2025-05-30 05:08:49,484 | INFO     | mean y: 2361052.2985074627
[2025-05-30 07:09:02] 2025-05-30 05:08:49,484 | INFO     | -- intersect: 27054591495.32126
[2025-05-30 07:09:02] 2025-05-30 05:08:49,484 | INFO     | intersect: 27054591495.32126
[2025-05-30 07:09:02] 2025-05-30 05:08:49,484 | INFO     | chi2: 0.05763196318250816
[2025-05-30 07:09:02] 2025-05-30 05:08:49,484 | INFO     | current chi2=0.05763196318250816 (change=2.016191553497085 %)
[2025-05-30 07:09:02] 2025-05-30 05:08:49,484 | INFO     | left removable region: 20
[2025-05-30 07:09:02] 2025-05-30 05:08:49,484 | INFO     | sum of square deviations: 509440249.5
[2025-05-30 07:09:02] 2025-05-30 05:08:49,485 | INFO     | sum of deviations: -6201069466.5
[2025-05-30 07:09:02] 2025-05-30 05:08:49,485 | INFO     | mean x: 1748577740.5
[2025-05-30 07:09:02] 2025-05-30 05:08:49,485 | INFO     | mean y: 2351591.686440678
[2025-05-30 07:09:02] 2025-05-30 05:08:49,485 | INFO     | -- intersect: 21286598462.75372
[2025-05-30 07:09:02] 2025-05-30 05:08:49,485 | INFO     | intersect: 21286598462.75372
[2025-05-30 07:09:02] 2025-05-30 05:08:49,486 | INFO     | chi2: 0.046621163466495044
[2025-05-30 07:09:02] 2025-05-30 05:08:49,486 | INFO     | -- intersect: 21286598462.75372
[2025-05-30 07:09:02] 2025-05-30 05:08:49,486 | INFO     | current memory leak: -12.17 B/s (using 118 data points, chi2=0.05)
[2025-05-30 07:09:02] 2025-05-30 05:08:49,486 | INFO     | ..............................
[2025-05-30 07:09:02] 2025-05-30 05:08:49,487 | INFO     | . Timing measurements:
[2025-05-30 07:09:02] 2025-05-30 05:08:49,487 | INFO     | . get job = 0 s
[2025-05-30 07:09:02] 2025-05-30 05:08:49,487 | INFO     | . initial setup = 1 s
[2025-05-30 07:09:02] 2025-05-30 05:08:49,487 | INFO     | . payload setup = 5 s
[2025-05-30 07:09:02] 2025-05-30 05:08:49,487 | INFO     | . stage-in = 0 s
[2025-05-30 07:09:02] 2025-05-30 05:08:49,487 | INFO     | . payload execution = 8771 s
[2025-05-30 07:09:02] 2025-05-30 05:08:49,487 | INFO     | . stage-out = 0 s
[2025-05-30 07:09:02] 2025-05-30 05:08:49,487 | INFO     | . log creation = 0 s
[2025-05-30 07:09:02] 2025-05-30 05:08:49,487 | INFO     | ..............................
[2025-05-30 07:09:02] 2025-05-30 05:08:49,725 | INFO     | 
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | job summary report
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | --------------------------------------------------
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | PanDA job id: 6667098639
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | task id: 44871837
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | errors: (none)
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | pilot state: finished 
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | transexitcode: 0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | exeerrorcode: 0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | exeerrordiag: 
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | exitcode: 0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,726 | INFO     | exitmsg: OK
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | cpuconsumptiontime: 33686 s
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | nevents: 400
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | neventsw: 0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | pid: 1991536
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | pgrp: 1991536
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | corecount: 4
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | event service: False
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | sizes: {0: 2405245, 3: 2405451, 11: 2405479, 8780: 2433420, 8782: 2442439, 8787: 2442553}
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | --------------------------------------------------
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | 
[2025-05-30 07:09:02] 2025-05-30 05:08:49,727 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-05-30 07:09:02] 2025-05-30 05:08:49,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,744 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,744 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,744 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 07:09:02] 2025-05-30 05:08:49,745 | INFO     | job 6667098639 has completed (purged errors)
[2025-05-30 07:09:02] 2025-05-30 05:08:49,746 | INFO     | overall cleanup function is called
[2025-05-30 07:09:02] 2025-05-30 05:08:50,750 | INFO     | --- collectZombieJob: --- 10, [1991536]
[2025-05-30 07:09:02] 2025-05-30 05:08:50,750 | INFO     | zombie collector waiting for pid 1991536
[2025-05-30 07:09:02] 2025-05-30 05:08:50,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 07:09:02] 2025-05-30 05:08:50,750 | INFO     | collected zombie processes
[2025-05-30 07:09:02] 2025-05-30 05:08:50,750 | INFO     | will attempt to kill all subprocesses of pid=1991536
[2025-05-30 07:09:02] 2025-05-30 05:08:50,906 | INFO     | process IDs to be killed: [1991536] (in reverse order)
[2025-05-30 07:09:02] 2025-05-30 05:08:50,970 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 07:09:02] 2025-05-30 05:08:50,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 07:09:02] 2025-05-30 05:08:50,979 | INFO     | did not find any defunct processes belonging to 1991536
[2025-05-30 07:09:02] 2025-05-30 05:08:50,986 | INFO     | did not find any defunct processes belonging to 1991536
[2025-05-30 07:09:02] 2025-05-30 05:08:50,986 | INFO     | ready for new job
[2025-05-30 07:09:02] 2025-05-30 05:08:50,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 07:09:02] 2025-05-30 05:08:50,988 | INFO     | **************************************
[2025-05-30 07:09:02] 2025-05-30 05:08:50,989 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 07:09:02] 2025-05-30 05:08:50,989 | INFO     | **************************************
[2025-05-30 07:09:02] 2025-05-30 05:08:50,989 | INFO     | 
[2025-05-30 07:09:02] 2025-05-30 05:08:50,992 | INFO     | architecture information:
[2025-05-30 07:09:02] 2025-05-30 05:08:50,993 | INFO     | executing command: cat /etc/os-release
[2025-05-30 07:09:02] 2025-05-30 05:08:51,004 | INFO     | cat /etc/os-release:
[2025-05-30 07:09:02] NAME="CentOS Linux"
[2025-05-30 07:09:02] VERSION="7 (Core)"
[2025-05-30 07:09:02] ID="centos"
[2025-05-30 07:09:02] ID_LIKE="rhel fedora"
[2025-05-30 07:09:02] VERSION_ID="7"
[2025-05-30 07:09:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 07:09:02] ANSI_COLOR="0;31"
[2025-05-30 07:09:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 07:09:02] HOME_URL="https://www.centos.org/"
[2025-05-30 07:09:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 07:09:02] 
[2025-05-30 07:09:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 07:09:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 07:09:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 07:09:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 07:09:02] 
[2025-05-30 07:09:02] 2025-05-30 05:08:51,004 | INFO     | **************************************
[2025-05-30 07:09:02] 2025-05-30 05:08:51,507 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-05-30 07:09:02] 2025-05-30 05:08:51,517 | INFO     | sufficient remaining disk space (677131583488 B)
[2025-05-30 07:09:02] 2025-05-30 05:08:51,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 07:09:02] 2025-05-30 05:08:51,518 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 07:09:02] 2025-05-30 05:08:51,518 | INFO     | update_server=False
[2025-05-30 07:09:02] 2025-05-30 05:08:51,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 07:09:02] 2025-05-30 05:08:51,518 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 07:09:02] 2025-05-30 05:08:51,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 07:09:02] 2025-05-30 05:08:51,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 07:09:02] 2025-05-30 05:08:51,519 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 07:09:02] 2025-05-30 05:08:51,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 07:09:02] 2025-05-30 05:08:51,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 07:09:02] 2025-05-30 05:08:52,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 07:09:02] 2025-05-30 05:08:52,053 | INFO     | aborting loop
[2025-05-30 07:09:02] 2025-05-30 05:08:52,166 | INFO     | all data control threads have been joined
[2025-05-30 07:09:02] 2025-05-30 05:08:52,167 | INFO     | all job control threads have been joined
[2025-05-30 07:09:02] 2025-05-30 05:08:52,244 | INFO     | all payload control threads have been joined
[2025-05-30 07:09:02] 2025-05-30 05:08:52,523 | INFO     | [job] retrieve thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:52,524 | INFO     | [job] queue monitor thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:52,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 07:09:02] 2025-05-30 05:08:52,936 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,053 | INFO     | [payload] failed_post thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,058 | INFO     | [job] job monitor thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,170 | INFO     | [job] control thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,171 | INFO     | [data] control thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,177 | INFO     | [job] validate thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,249 | INFO     | [payload] control thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,438 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,439 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,439 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,497 | INFO     | [data] copytool_in thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:53,732 | INFO     | [payload] validate_post thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:54,788 | INFO     | [data] copytool_out thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:55,525 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 07:09:02] 2025-05-30 05:08:57,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23229225645888)>', '<ExcThread(monitor, started 23228785342208)>']
[2025-05-30 07:09:02] 2025-05-30 05:08:57,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 07:09:02] 2025-05-30 05:08:57,547 | INFO     | [monitor] control thread has ended
[2025-05-30 07:09:02] 2025-05-30 05:09:02,474 | INFO     | all workflow threads have been joined
[2025-05-30 07:09:02] 2025-05-30 05:09:02,474 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 07:09:02] 2025-05-30 05:09:02,475 | INFO     | traces error code: 0
[2025-05-30 07:09:02] 2025-05-30 05:09:02,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 07:09:02] 2025-05-30 05:09:02,598 [wrapper] ==== pilot stdout END ====
[2025-05-30 07:09:02] 2025-05-30 05:09:02,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 07:09:02] 2025-05-30 05:09:02,602 [wrapper] pilotpid: 1982297
[2025-05-30 07:09:02] 2025-05-30 05:09:02,604 [wrapper] Pilot exit status: 0
[2025-05-30 07:09:02] 2025-05-30 05:09:02,611 [wrapper] pandaids: 6667098639
[2025-05-30 07:09:02] 2025-05-30 05:09:02,647 [wrapper] cleanup supervisor_pilot 2256947 1982298
[2025-05-30 07:09:02] 2025-05-30 05:09:02,649 [wrapper] Test setup, not cleaning
[2025-05-30 07:09:02] 2025-05-30 05:09:02,650 [wrapper] apfmon messages muted
[2025-05-30 07:09:02] 2025-05-30 05:09:02,652 [wrapper] ==== wrapper stdout END ====
[2025-05-30 07:09:02] 2025-05-30 05:09:02,654 [wrapper] ==== wrapper stderr END ====
[2025-05-30 07:09:02]  *** Error codes and diagnostics ***
[2025-05-30 07:09:02]     "exeErrorCode": 0,
[2025-05-30 07:09:02]     "exeErrorDiag": "",
[2025-05-30 07:09:02]     "pilotErrorCode": 0,
[2025-05-30 07:09:02]     "pilotErrorDiag": "",
[2025-05-30 07:09:02]  *** Listing of results directory ***
[2025-05-30 07:09:02] total 415232
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc    495897 May 27 15:20 pilot3.tar.gz
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc      5111 May 27 15:30 queuedata.json
[2025-05-30 07:09:02] -rwx------ 1 boinc boinc     37140 May 27 15:31 runpilot2-wrapper.sh
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc       100 May 30 04:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 07:09:02] -rwxr-xr-x 1 boinc boinc      7986 May 30 04:41 run_atlas
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc       105 May 30 04:41 job.xml
[2025-05-30 07:09:02] -rw-r--r-- 2 boinc boinc 224377278 May 30 04:42 EVNT.44871834._002679.pool.root.1
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc      6637 May 30 04:42 init_data.xml
[2025-05-30 07:09:02] -rw-r--r-- 2 boinc boinc     15093 May 30 04:42 start_atlas.sh
[2025-05-30 07:09:02] drwxrwx--x 2 boinc boinc      4096 May 30 04:42 shared
[2025-05-30 07:09:02] -rw-r--r-- 2 boinc boinc    508883 May 30 04:42 input.tar.gz
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc         0 May 30 04:42 boinc_lockfile
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc      2559 May 30 04:42 pandaJob.out
[2025-05-30 07:09:02] -rw------- 1 boinc boinc    992350 May 30 04:42 agis_schedconf.cvmfs.json
[2025-05-30 07:09:02] -rw------- 1 boinc boinc   1603667 May 30 04:42 agis_ddmendpoints.agis.ALL.json
[2025-05-30 07:09:02] drwx------ 4 boinc boinc      4096 May 30 04:42 pilot3
[2025-05-30 07:09:02] -rw------- 1 boinc boinc 194744059 May 30 07:08 HITS.44871837._068120.pool.root.1
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc       529 May 30 07:08 boinc_task_state.xml
[2025-05-30 07:09:02] -rw------- 1 boinc boinc        95 May 30 07:08 pilot_heartbeat.json
[2025-05-30 07:09:02] -rw------- 1 boinc boinc      1040 May 30 07:08 memory_monitor_summary.json
[2025-05-30 07:09:02] -rw------- 1 boinc boinc    275356 May 30 07:08 log.44871837._068120.job.log.tgz.1
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc      8192 May 30 07:08 boinc_mmap_file
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc        27 May 30 07:08 wrapper_checkpoint.txt
[2025-05-30 07:09:02] -rw------- 1 boinc boinc      7716 May 30 07:08 heartbeat.json
[2025-05-30 07:09:02] -rw------- 1 boinc boinc      4486 May 30 07:09 pilotlog.txt
[2025-05-30 07:09:02] -rw------- 1 boinc boinc    839133 May 30 07:09 log.44871837._068120.job.log.1
[2025-05-30 07:09:02] -rw------- 1 boinc boinc       357 May 30 07:09 output.list
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc       620 May 30 07:09 runtime_log
[2025-05-30 07:09:02] -rw------- 1 boinc boinc   1136640 May 30 07:09 result.tar.gz
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc      9025 May 30 07:09 runtime_log.err
[2025-05-30 07:09:02] -rw------- 1 boinc boinc       661 May 30 07:09 3K1MDm7Z9d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQsRKDmwTqLKm.diag
[2025-05-30 07:09:02] -rw-r--r-- 1 boinc boinc     20944 May 30 07:09 stderr.txt
[2025-05-30 07:09:02] HITS file was successfully produced:
[2025-05-30 07:09:02] -rw------- 1 boinc boinc 194744059 May 30 07:08 shared/HITS.pool.root.1
[2025-05-30 07:09:02]  *** Contents of shared directory: ***
[2025-05-30 07:09:02] total 410936
[2025-05-30 07:09:02] -rw-r--r-- 2 boinc boinc 224377278 May 30 04:42 ATLAS.root_0
[2025-05-30 07:09:02] -rw-r--r-- 2 boinc boinc     15093 May 30 04:42 start_atlas.sh
[2025-05-30 07:09:02] -rw-r--r-- 2 boinc boinc    508883 May 30 04:42 input.tar.gz
[2025-05-30 07:09:02] -rw------- 1 boinc boinc 194744059 May 30 07:08 HITS.pool.root.1
[2025-05-30 07:09:02] -rw------- 1 boinc boinc   1136640 May 30 07:09 result.tar.gz
07:09:03 (1978516): run_atlas exited; CPU time 33948.318188
07:09:03 (1978516): called boinc_finish(0)

</stderr_txt>
]]>

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