Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:24:08 (3462): wrapper (7.7.26015): starting
06:24:08 (3462): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 06:24:08] Arguments: --nthreads 8
[2025-05-28 06:24:08] Threads: 8
[2025-05-28 06:24:08] Checking for CVMFS
[2025-05-28 06:24:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 06:24:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 06:24:10] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 06:24:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 06:24:11] 2.11.2.0 22062 22825 98484 146506 3 14 21966956 25165824 4636 130560 0 13059029 99.786 13855796 1758 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 06:24:11] CVMFS is ok
[2025-05-28 06:24:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 06:24:11] Checking for apptainer binary...
[2025-05-28 06:24:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 06:24:11] Running /usr/bin/apptainer --version
[2025-05-28 06:24:11] apptainer version 1.3.2-1.el7
[2025-05-28 06:24:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 06:24:22] cg-vwn481.simple-grid.lan
[2025-05-28 06:24:22] apptainer works
[2025-05-28 06:24:22] Set ATHENA_PROC_NUMBER=8
[2025-05-28 06:24:22] Set ATHENA_CORE_NUMBER=8
[2025-05-28 06:24:22] Starting ATLAS job with PandaID=6666851160
[2025-05-28 06:24:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 11:31:56]  *** The last 200 lines of the pilot log: ***
[2025-05-28 11:31:56] 2025-05-28 09:19:24,506 | INFO     | extracted standard info from prmon json
[2025-05-28 11:31:56] 2025-05-28 09:19:24,506 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 11:31:56] 2025-05-28 09:19:24,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 11:31:56] 2025-05-28 09:19:24,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 11:31:56] 2025-05-28 09:19:24,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 11:31:56] 2025-05-28 09:19:24,512 | INFO     | fitting pss+swap vs Time
[2025-05-28 11:31:56] 2025-05-28 09:19:24,512 | INFO     | sum of square deviations: 6662039329.5
[2025-05-28 11:31:56] 2025-05-28 09:19:24,515 | INFO     | sum of deviations: 53824347716.00003
[2025-05-28 11:31:56] 2025-05-28 09:19:24,515 | INFO     | mean x: 1748415408.5
[2025-05-28 11:31:56] 2025-05-28 09:19:24,515 | INFO     | mean y: 2458852.510791367
[2025-05-28 11:31:56] 2025-05-28 09:19:24,515 | INFO     | -- intersect: -14123443779.495913
[2025-05-28 11:31:56] 2025-05-28 09:19:24,515 | INFO     | intersect: -14123443779.495913
[2025-05-28 11:31:56] 2025-05-28 09:19:24,515 | INFO     | chi2: 7.354781189877704
[2025-05-28 11:31:56] 2025-05-28 09:19:24,516 | INFO     | sum of square deviations: 6309000152.0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,518 | INFO     | sum of deviations: 90586153083.0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,518 | INFO     | mean x: 1748415256.0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,518 | INFO     | mean y: 2474555.230769231
[2025-05-28 11:31:56] 2025-05-28 09:19:24,518 | INFO     | -- intersect: -25101695395.13138
[2025-05-28 11:31:56] 2025-05-28 09:19:24,519 | INFO     | intersect: -25101695395.13138
[2025-05-28 11:31:56] 2025-05-28 09:19:24,519 | INFO     | chi2: 5.800104891124014
[2025-05-28 11:31:56] 2025-05-28 09:19:24,519 | INFO     | current chi2=5.800104891124014 (change=21.13830797431978 %)
[2025-05-28 11:31:56] 2025-05-28 09:19:24,519 | INFO     | right removable region: 272
[2025-05-28 11:31:56] 2025-05-28 09:19:24,520 | INFO     | sum of square deviations: 6309000152.0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,522 | INFO     | sum of deviations: -42723396916.0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,522 | INFO     | mean x: 1748415561.0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,522 | INFO     | mean y: 2500527.4652014654
[2025-05-28 11:31:56] 2025-05-28 09:19:24,522 | INFO     | -- intersect: 11842451420.957241
[2025-05-28 11:31:56] 2025-05-28 09:19:24,522 | INFO     | intersect: 11842451420.957241
[2025-05-28 11:31:56] 2025-05-28 09:19:24,523 | INFO     | chi2: 2.7168548590867188
[2025-05-28 11:31:56] 2025-05-28 09:19:24,523 | INFO     | current chi2=2.7168548590867188 (change=63.06001784491029 %)
[2025-05-28 11:31:56] 2025-05-28 09:19:24,523 | INFO     | sum of square deviations: 5968658887.0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,526 | INFO     | sum of deviations: -77016990209.99997
[2025-05-28 11:31:56] 2025-05-28 09:19:24,526 | INFO     | mean x: 1748415713.5
[2025-05-28 11:31:56] 2025-05-28 09:19:24,526 | INFO     | mean y: 2515789.119402985
[2025-05-28 11:31:56] 2025-05-28 09:19:24,526 | INFO     | -- intersect: 22563315198.000015
[2025-05-28 11:31:56] 2025-05-28 09:19:24,526 | INFO     | intersect: 22563315198.000015
[2025-05-28 11:31:56] 2025-05-28 09:19:24,526 | INFO     | chi2: 1.869879158393711
[2025-05-28 11:31:56] 2025-05-28 09:19:24,527 | INFO     | current chi2=1.869879158393711 (change=31.174860072492862 %)
[2025-05-28 11:31:56] 2025-05-28 09:19:24,527 | INFO     | sum of square deviations: 5640782972.0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,529 | INFO     | sum of deviations: -74929351220.00002
[2025-05-28 11:31:56] 2025-05-28 09:19:24,529 | INFO     | mean x: 1748415866.0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,530 | INFO     | mean y: 2514794.030418251
[2025-05-28 11:31:56] 2025-05-28 09:19:24,530 | INFO     | -- intersect: 23227600239.160442
[2025-05-28 11:31:56] 2025-05-28 09:19:24,530 | INFO     | intersect: 23227600239.160442
[2025-05-28 11:31:56] 2025-05-28 09:19:24,530 | INFO     | chi2: 1.8583412816654539
[2025-05-28 11:31:56] 2025-05-28 09:19:24,530 | INFO     | current chi2=1.8583412816654539 (change=0.6170386292860047 %)
[2025-05-28 11:31:56] 2025-05-28 09:19:24,530 | INFO     | left removable region: 30
[2025-05-28 11:31:56] 2025-05-28 09:19:24,531 | INFO     | sum of square deviations: 4394577280.5
[2025-05-28 11:31:56] 2025-05-28 09:19:24,533 | INFO     | sum of deviations: -13474270937.500002
[2025-05-28 11:31:56] 2025-05-28 09:19:24,533 | INFO     | mean x: 1748416140.5
[2025-05-28 11:31:56] 2025-05-28 09:19:24,533 | INFO     | mean y: 2519751.144628099
[2025-05-28 11:31:56] 2025-05-28 09:19:24,533 | INFO     | -- intersect: 5363361371.368599
[2025-05-28 11:31:56] 2025-05-28 09:19:24,533 | INFO     | intersect: 5363361371.368599
[2025-05-28 11:31:56] 2025-05-28 09:19:24,533 | INFO     | chi2: 0.10815113113733194
[2025-05-28 11:31:56] 2025-05-28 09:19:24,534 | INFO     | -- intersect: 5363361371.368599
[2025-05-28 11:31:56] 2025-05-28 09:19:24,534 | INFO     | current memory leak: -3.07 B/s (using 242 data points, chi2=0.11)
[2025-05-28 11:31:56] 2025-05-28 09:19:24,534 | INFO     | ..............................
[2025-05-28 11:31:56] 2025-05-28 09:19:24,535 | INFO     | . Timing measurements:
[2025-05-28 11:31:56] 2025-05-28 09:19:24,535 | INFO     | . get job = 0 s
[2025-05-28 11:31:56] 2025-05-28 09:19:24,535 | INFO     | . initial setup = 7 s
[2025-05-28 11:31:56] 2025-05-28 09:19:24,535 | INFO     | . payload setup = 157 s
[2025-05-28 11:31:56] 2025-05-28 09:19:24,535 | INFO     | . stage-in = 0 s
[2025-05-28 11:31:56] 2025-05-28 09:19:24,535 | INFO     | . payload execution = 17050 s
[2025-05-28 11:31:56] 2025-05-28 09:19:24,535 | INFO     | . stage-out = 3 s
[2025-05-28 11:31:56] 2025-05-28 09:19:24,535 | INFO     | . log creation = 1 s
[2025-05-28 11:31:56] 2025-05-28 09:19:24,535 | INFO     | ..............................
[2025-05-28 11:31:56] 2025-05-28 09:19:24,653 | INFO     | 
[2025-05-28 11:31:56] 2025-05-28 09:19:24,653 | INFO     | job summary report
[2025-05-28 11:31:56] 2025-05-28 09:19:24,653 | INFO     | --------------------------------------------------
[2025-05-28 11:31:56] 2025-05-28 09:19:24,653 | INFO     | PanDA job id: 6666851160
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | task id: 44871837
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | errors: (none)
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | pilot state: finished 
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | transexitcode: 0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | exeerrorcode: 0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | exeerrordiag: 
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | exitcode: 0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | exitmsg: OK
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | cpuconsumptiontime: 64125 s
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | nevents: 400
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | neventsw: 0
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | pid: 17520
[2025-05-28 11:31:56] 2025-05-28 09:19:24,654 | INFO     | pgrp: 17520
[2025-05-28 11:31:56] 2025-05-28 09:19:24,655 | INFO     | corecount: 8
[2025-05-28 11:31:56] 2025-05-28 09:19:24,655 | INFO     | event service: False
[2025-05-28 11:31:56] 2025-05-28 09:19:24,655 | INFO     | sizes: {0: 2404406, 1: 2405092, 2: 2405291, 12: 2405291, 23: 2405319, 34: 2405347, 45: 2405503, 55: 2405531, 66: 2405559, 77: 2405587, 88: 2405643, 91: 2406157, 98
[2025-05-28 11:31:56] 2025-05-28 09:19:24,655 | INFO     | --------------------------------------------------
[2025-05-28 11:31:56] 2025-05-28 09:19:24,655 | INFO     | 
[2025-05-28 11:31:56] 2025-05-28 09:19:24,655 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-05-28 11:31:56] 2025-05-28 09:19:24,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 11:31:56] 2025-05-28 09:19:24,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 11:31:56] 2025-05-28 09:19:24,752 | INFO     | job 6666851160 has completed (purged errors)
[2025-05-28 11:31:56] 2025-05-28 09:19:24,752 | INFO     | overall cleanup function is called
[2025-05-28 11:31:56] 2025-05-28 09:19:25,760 | INFO     | --- collectZombieJob: --- 10, [17520]
[2025-05-28 11:31:56] 2025-05-28 09:19:25,760 | INFO     | zombie collector waiting for pid 17520
[2025-05-28 11:31:56] 2025-05-28 09:19:25,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 11:31:56] 2025-05-28 09:19:25,760 | INFO     | collected zombie processes
[2025-05-28 11:31:56] 2025-05-28 09:19:25,760 | INFO     | will attempt to kill all subprocesses of pid=17520
[2025-05-28 11:31:56] 2025-05-28 09:19:25,857 | INFO     | process IDs to be killed: [17520] (in reverse order)
[2025-05-28 11:31:56] 2025-05-28 09:19:25,928 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 11:31:56] 2025-05-28 09:19:25,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 11:31:56] 2025-05-28 09:19:25,931 | INFO     | did not find any defunct processes belonging to 17520
[2025-05-28 11:31:56] 2025-05-28 09:19:25,934 | INFO     | did not find any defunct processes belonging to 17520
[2025-05-28 11:31:56] 2025-05-28 09:19:25,934 | INFO     | ready for new job
[2025-05-28 11:31:56] 2025-05-28 09:19:25,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 11:31:56] 2025-05-28 09:19:25,938 | INFO     | **************************************
[2025-05-28 11:31:56] 2025-05-28 09:19:25,939 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 11:31:56] 2025-05-28 09:19:25,939 | INFO     | **************************************
[2025-05-28 11:31:56] 2025-05-28 09:19:25,939 | INFO     | 
[2025-05-28 11:31:56] 2025-05-28 09:19:25,939 | INFO     | pilot is running in a VM
[2025-05-28 11:31:56] 2025-05-28 09:19:25,939 | INFO     | architecture information:
[2025-05-28 11:31:56] 2025-05-28 09:19:25,940 | INFO     | executing command: cat /etc/os-release
[2025-05-28 11:31:56] 2025-05-28 09:19:26,025 | INFO     | cat /etc/os-release:
[2025-05-28 11:31:56] NAME="CentOS Linux"
[2025-05-28 11:31:56] VERSION="7 (Core)"
[2025-05-28 11:31:56] ID="centos"
[2025-05-28 11:31:56] ID_LIKE="rhel fedora"
[2025-05-28 11:31:56] VERSION_ID="7"
[2025-05-28 11:31:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 11:31:56] ANSI_COLOR="0;31"
[2025-05-28 11:31:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 11:31:56] HOME_URL="https://www.centos.org/"
[2025-05-28 11:31:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 11:31:56] 
[2025-05-28 11:31:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 11:31:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 11:31:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 11:31:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 11:31:56] 
[2025-05-28 11:31:56] 2025-05-28 09:19:26,025 | INFO     | **************************************
[2025-05-28 11:31:56] 2025-05-28 09:19:26,529 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-05-28 11:31:56] 2025-05-28 09:19:26,555 | INFO     | sufficient remaining disk space (496094937088 B)
[2025-05-28 11:31:56] 2025-05-28 09:19:26,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 11:31:56] 2025-05-28 09:19:26,555 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 11:31:56] 2025-05-28 09:19:26,555 | INFO     | update_server=False
[2025-05-28 11:31:56] 2025-05-28 09:19:26,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 11:31:56] 2025-05-28 09:19:26,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 11:31:56] 2025-05-28 09:19:26,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 11:31:56] 2025-05-28 09:19:26,556 | INFO     | aborting loop
[2025-05-28 11:31:56] 2025-05-28 09:19:26,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 11:31:56] 2025-05-28 09:19:26,557 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 11:31:56] 2025-05-28 09:19:26,557 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 11:31:56] 2025-05-28 09:19:26,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 11:31:56] 2025-05-28 09:19:26,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 11:31:56] 2025-05-28 09:19:27,277 | INFO     | all data control threads have been joined
[2025-05-28 11:31:56] 2025-05-28 09:19:27,433 | INFO     | all payload control threads have been joined
[2025-05-28 11:31:56] 2025-05-28 09:19:27,468 | INFO     | all job control threads have been joined
[2025-05-28 11:31:56] 2025-05-28 09:19:27,562 | INFO     | [job] queue monitor thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:27,562 | INFO     | [job] job monitor thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:27,563 | INFO     | [job] retrieve thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:27,685 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,065 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,078 | INFO     | [job] validate thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,196 | INFO     | [data] copytool_in thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,213 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,284 | INFO     | [data] control thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,439 | INFO     | [payload] control thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,474 | INFO     | [job] control thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,564 | INFO     | [data] copytool_out thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,627 | INFO     | [payload] validate_post thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,767 | INFO     | [payload] failed_post thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:28,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 11:31:56] 2025-05-28 09:19:32,949 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 11:31:56] 2025-05-28 09:19:34,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414618818368)>', '<ExcThread(monitor, started 140413956519680)>']
[2025-05-28 11:31:56] 2025-05-28 09:19:35,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 11:31:56] 2025-05-28 09:19:35,612 | INFO     | [monitor] control thread has ended
[2025-05-28 11:31:56] 2025-05-28 09:19:39,830 | INFO     | all workflow threads have been joined
[2025-05-28 11:31:56] 2025-05-28 09:19:39,830 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 11:31:56] 2025-05-28 09:19:39,830 | INFO     | traces error code: 0
[2025-05-28 11:31:56] 2025-05-28 09:19:39,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 11:31:56] 2025-05-28 09:19:40,019 [wrapper] ==== pilot stdout END ====
[2025-05-28 11:31:56] 2025-05-28 09:19:40,026 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 11:31:56] 2025-05-28 09:19:40,038 [wrapper] pilotpid: 10900
[2025-05-28 11:31:56] 2025-05-28 09:19:40,041 [wrapper] Pilot exit status: 0
[2025-05-28 11:31:56] 2025-05-28 09:19:40,061 [wrapper] pandaids: 6666851160
[2025-05-28 11:31:56] 2025-05-28 09:19:40,096 [wrapper] cleanup supervisor_pilot 32709 10901
[2025-05-28 11:31:56] 2025-05-28 09:19:40,109 [wrapper] Test setup, not cleaning
[2025-05-28 11:31:56] 2025-05-28 09:19:40,114 [wrapper] apfmon messages muted
[2025-05-28 11:31:56] 2025-05-28 09:19:40,117 [wrapper] ==== wrapper stdout END ====
[2025-05-28 11:31:56] 2025-05-28 09:19:40,120 [wrapper] ==== wrapper stderr END ====
[2025-05-28 11:31:56]  *** Error codes and diagnostics ***
[2025-05-28 11:31:56]     "exeErrorCode": 0,
[2025-05-28 11:31:56]     "exeErrorDiag": "",
[2025-05-28 11:31:56]     "pilotErrorCode": 0,
[2025-05-28 11:31:56]     "pilotErrorDiag": "",
[2025-05-28 11:31:56]  *** Listing of results directory ***
[2025-05-28 11:31:56] total 424592
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc    495897 May 27 10:13 pilot3.tar.gz
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc      5111 May 27 11:25 queuedata.json
[2025-05-28 11:31:56] -rwx------. 1 boinc boinc     37140 May 27 11:25 runpilot2-wrapper.sh
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc       100 May 28 06:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 11:31:56] -rwxr-xr-x. 1 boinc boinc      7986 May 28 06:24 run_atlas
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc       105 May 28 06:24 job.xml
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc      6373 May 28 06:24 init_data.xml
[2025-05-28 11:31:56] -rw-r--r--. 2 boinc boinc 226214331 May 28 06:24 EVNT.44871834._002570.pool.root.1
[2025-05-28 11:31:56] -rw-r--r--. 2 boinc boinc     15093 May 28 06:24 start_atlas.sh
[2025-05-28 11:31:56] drwxrwx--x. 2 boinc boinc        68 May 28 06:24 shared
[2025-05-28 11:31:56] -rw-r--r--. 2 boinc boinc    508878 May 28 06:24 input.tar.gz
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc         0 May 28 06:24 boinc_lockfile
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc      2559 May 28 06:24 pandaJob.out
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc    991177 May 28 06:27 agis_schedconf.cvmfs.json
[2025-05-28 11:31:56] drwx------. 4 boinc boinc      4096 May 28 06:27 pilot3
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc 200944080 May 28 11:16 HITS.44871837._065208.pool.root.1
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc       531 May 28 11:16 boinc_task_state.xml
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc      1014 May 28 11:17 memory_monitor_summary.json
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc   1603667 May 28 11:17 agis_ddmendpoints.agis.ALL.json
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc    412483 May 28 11:17 log.44871837._065208.job.log.tgz.1
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc        95 May 28 11:18 pilot_heartbeat.json
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc      7692 May 28 11:19 heartbeat.json
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc      4540 May 28 11:19 pilotlog.txt
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc   1487934 May 28 11:19 log.44871837._065208.job.log.1
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc       357 May 28 11:19 output.list
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc       620 May 28 11:19 runtime_log
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc   1914880 May 28 11:19 result.tar.gz
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc      8673 May 28 11:19 runtime_log.err
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc       657 May 28 11:19 gZHLDmlj5d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmC2YKDm0V7rqn.diag
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc      8192 May 28 11:31 boinc_mmap_file
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc        28 May 28 11:31 wrapper_checkpoint.txt
[2025-05-28 11:31:56] -rw-r--r--. 1 boinc boinc     20512 May 28 11:31 stderr.txt
[2025-05-28 11:31:56] HITS file was successfully produced:
[2025-05-28 11:31:56] -rw-------. 1 boinc boinc 200944080 May 28 11:16 shared/HITS.pool.root.1
[2025-05-28 11:31:56]  *** Contents of shared directory: ***
[2025-05-28 11:31:57] total 419540
[2025-05-28 11:31:57] -rw-r--r--. 2 boinc boinc 226214331 May 28 06:24 ATLAS.root_0
[2025-05-28 11:31:57] -rw-r--r--. 2 boinc boinc     15093 May 28 06:24 start_atlas.sh
[2025-05-28 11:31:57] -rw-r--r--. 2 boinc boinc    508878 May 28 06:24 input.tar.gz
[2025-05-28 11:31:57] -rw-------. 1 boinc boinc 200944080 May 28 11:16 HITS.pool.root.1
[2025-05-28 11:31:57] -rw-------. 1 boinc boinc   1914880 May 28 11:19 result.tar.gz
11:31:58 (3462): run_atlas exited; CPU time 64342.846141
11:31:58 (3462): called boinc_finish(0)

</stderr_txt>
]]>

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