Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
21:41:01 (1679860): wrapper (7.7.26015): starting
21:41:01 (1679860): wrapper: running run_atlas (--nthreads 4)
[2025-05-28 21:41:01] Arguments: --nthreads 4
[2025-05-28 21:41:01] Threads: 4
[2025-05-28 21:41:01] Checking for CVMFS
[2025-05-28 21:41:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 21:41:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 21:41:01] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 21:41:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 21:41:01] 2.12.7.0 14849 12801 45724 146528 3 56 27813363 33554432 0 130560 0 4882204 99.988 1607840 1725 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2025-05-28 21:41:01] CVMFS is ok
[2025-05-28 21:41:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 21:41:01] Checking for apptainer binary...
[2025-05-28 21:41:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 21:41:01] Running /usr/bin/apptainer --version
[2025-05-28 21:41:01] apptainer version 1.4.0
[2025-05-28 21:41:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 21:41:01] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2025-05-28 21:41:01] apptainer works
[2025-05-28 21:41:01] Set ATHENA_PROC_NUMBER=4
[2025-05-28 21:41:01] Set ATHENA_CORE_NUMBER=4
[2025-05-28 21:41:01] Starting ATLAS job with PandaID=6666949714
[2025-05-28 21:41:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 22:58:44]  *** The last 200 lines of the pilot log: ***
[2025-05-28 22:58:44]  filetype=log
[2025-05-28 22:58:44]  guid=fe05ec69-fb2e-4276-a748-8d234b27f5de
[2025-05-28 22:58:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-28 22:58:44]  is_altstaged=None
[2025-05-28 22:58:44]  is_tar=False
[2025-05-28 22:58:44]  lfn=log.44871837._067147.job.log.tgz.1
[2025-05-28 22:58:44]  mtime=0
[2025-05-28 22:58:44]  protocol_id=None
[2025-05-28 22:58:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-28 22:58:44]  replicas=None
[2025-05-28 22:58:44]  scope=mc23_13p6TeV
[2025-05-28 22:58:44]  status=None
[2025-05-28 22:58:44]  status_code=0
[2025-05-28 22:58:44]  storage_token=
[2025-05-28 22:58:44]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6666949714/log.44871837._067147.job.log.tgz.1
[2025-05-28 22:58:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/c8/log.44871837._067147.job.log.tgz.1
[2025-05-28 22:58:44]  workdir=None
[2025-05-28 22:58:44] ]
[2025-05-28 22:58:44] 2025-05-28 19:58:22,882 | INFO     | transferring file log.44871837._067147.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6666949714/log.44871837._067147.job.log.tgz.1 to /home/ek/BOINC/slots/
[2025-05-28 22:58:44] 2025-05-28 19:58:22,882 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6666949714/log.44871837._067147.job.log.tgz.1 /home/ek/BOINC/slots/1/log.44871837._067147.job
[2025-05-28 22:58:44] 2025-05-28 19:58:22,892 | INFO     | adding to output.list: log.44871837._067147.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/c8/log.44871837._067147.job.log.tg
[2025-05-28 22:58:44] 2025-05-28 19:58:22,893 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-28 22:58:44] 2025-05-28 19:58:22,893 | INFO     | summary of transferred files:
[2025-05-28 22:58:44] 2025-05-28 19:58:22,893 | INFO     |  -- lfn=log.44871837._067147.job.log.tgz.1, status_code=0, status=transferred
[2025-05-28 22:58:44] 2025-05-28 19:58:22,893 | INFO     | stage-out finished correctly
[2025-05-28 22:58:44] 2025-05-28 19:58:22,923 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-28 22:58:44] 2025-05-28 19:58:22,968 | INFO     | job 6666949714 has state=finished
[2025-05-28 22:58:44] 2025-05-28 19:58:22,968 | INFO     | preparing for final server update for job 6666949714 in state='finished'
[2025-05-28 22:58:44] 2025-05-28 19:58:22,968 | INFO     | this job has now completed (state=finished)
[2025-05-28 22:58:44] 2025-05-28 19:58:22,968 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-28 22:58:44] 2025-05-28 19:58:22,968 | INFO     | log transfer has been attempted: DONE
[2025-05-28 22:58:44] 2025-05-28 19:58:22,968 | INFO     | job 6666949714 has finished - writing final server update
[2025-05-28 22:58:44] 2025-05-28 19:58:22,968 | INFO     | total number of processed events: 400 (read)
[2025-05-28 22:58:44] 2025-05-28 19:58:22,969 | INFO     | executing command: lscpu
[2025-05-28 22:58:44] 2025-05-28 19:58:22,984 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-28 22:58:44] 2025-05-28 19:58:23,873 | WARNING  | process 1690433 can no longer be monitored (due to stat problems) - aborting
[2025-05-28 22:58:44] 2025-05-28 19:58:23,874 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6666949714/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 22:58:44] 2025-05-28 19:58:23,985 | INFO     | number of running child processes to parent process 1690433: 1
[2025-05-28 22:58:44] 2025-05-28 19:58:23,985 | INFO     | maximum number of monitored processes: 6
[2025-05-28 22:58:44] 2025-05-28 19:58:24,746 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-28 22:58:44] 2025-05-28 19:58:24,746 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6666949714/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 22:58:44] 2025-05-28 19:58:24,746 | INFO     | extracted standard info from prmon json
[2025-05-28 22:58:44] 2025-05-28 19:58:24,746 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 22:58:44] 2025-05-28 19:58:24,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 22:58:44] 2025-05-28 19:58:24,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 22:58:44] 2025-05-28 19:58:24,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 22:58:44] 2025-05-28 19:58:24,747 | INFO     | fitting pss+swap vs Time
[2025-05-28 22:58:44] 2025-05-28 19:58:24,747 | INFO     | sum of square deviations: 101843770.0
[2025-05-28 22:58:44] 2025-05-28 19:58:24,747 | INFO     | sum of deviations: -13899886939.000002
[2025-05-28 22:58:44] 2025-05-28 19:58:24,747 | INFO     | mean x: 1748460065.0
[2025-05-28 22:58:44] 2025-05-28 19:58:24,747 | INFO     | mean y: 2554036.9565217393
[2025-05-28 22:58:44] 2025-05-28 19:58:24,747 | INFO     | -- intersect: 238636662150.35995
[2025-05-28 22:58:44] 2025-05-28 19:58:24,747 | INFO     | intersect: 238636662150.35995
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | chi2: 0.1288921609182699
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | -- intersect: 238636662150.35995
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | current memory leak: -136.48 B/s (using 69 data points, chi2=0.13)
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | ..............................
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | . Timing measurements:
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | . get job = 0 s
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | . initial setup = 1 s
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | . payload setup = 3 s
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | . stage-in = 0 s
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | . payload execution = 4615 s
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | . stage-out = 0 s
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | . log creation = 0 s
[2025-05-28 22:58:44] 2025-05-28 19:58:24,748 | INFO     | ..............................
[2025-05-28 22:58:44] 2025-05-28 19:58:25,135 | INFO     | 
[2025-05-28 22:58:44] 2025-05-28 19:58:25,135 | INFO     | job summary report
[2025-05-28 22:58:44] 2025-05-28 19:58:25,135 | INFO     | --------------------------------------------------
[2025-05-28 22:58:44] 2025-05-28 19:58:25,135 | INFO     | PanDA job id: 6666949714
[2025-05-28 22:58:44] 2025-05-28 19:58:25,135 | INFO     | task id: 44871837
[2025-05-28 22:58:44] 2025-05-28 19:58:25,135 | INFO     | errors: (none)
[2025-05-28 22:58:44] 2025-05-28 19:58:25,135 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | pilot state: finished 
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | transexitcode: 0
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | exeerrorcode: 0
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | exeerrordiag: 
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | exitcode: 0
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | exitmsg: OK
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | cpuconsumptiontime: 17482 s
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | nevents: 400
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | neventsw: 0
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | pid: 1690433
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | pgrp: 1690433
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | corecount: 4
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | event service: False
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | sizes: {0: 2405234, 2: 2405440, 11: 2405468, 4622: 2431645, 4623: 2440642, 4625: 2440756}
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | --------------------------------------------------
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | 
[2025-05-28 22:58:44] 2025-05-28 19:58:25,136 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | job 6666949714 has completed (purged errors)
[2025-05-28 22:58:44] 2025-05-28 19:58:25,147 | INFO     | overall cleanup function is called
[2025-05-28 22:58:44] 2025-05-28 19:58:26,154 | INFO     | --- collectZombieJob: --- 10, [1690433]
[2025-05-28 22:58:44] 2025-05-28 19:58:26,154 | INFO     | zombie collector waiting for pid 1690433
[2025-05-28 22:58:44] 2025-05-28 19:58:26,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 22:58:44] 2025-05-28 19:58:26,154 | INFO     | collected zombie processes
[2025-05-28 22:58:44] 2025-05-28 19:58:26,154 | INFO     | will attempt to kill all subprocesses of pid=1690433
[2025-05-28 22:58:44] 2025-05-28 19:58:26,256 | INFO     | process IDs to be killed: [1690433] (in reverse order)
[2025-05-28 22:58:44] 2025-05-28 19:58:26,291 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 22:58:44] 2025-05-28 19:58:26,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 22:58:44] 2025-05-28 19:58:26,294 | INFO     | did not find any defunct processes belonging to 1690433
[2025-05-28 22:58:44] 2025-05-28 19:58:26,296 | INFO     | did not find any defunct processes belonging to 1690433
[2025-05-28 22:58:44] 2025-05-28 19:58:26,296 | INFO     | ready for new job
[2025-05-28 22:58:44] 2025-05-28 19:58:26,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 22:58:44] 2025-05-28 19:58:26,297 | INFO     | **************************************
[2025-05-28 22:58:44] 2025-05-28 19:58:26,297 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 22:58:44] 2025-05-28 19:58:26,297 | INFO     | **************************************
[2025-05-28 22:58:44] 2025-05-28 19:58:26,297 | INFO     | 
[2025-05-28 22:58:44] 2025-05-28 19:58:26,298 | INFO     | architecture information:
[2025-05-28 22:58:44] 2025-05-28 19:58:26,298 | INFO     | executing command: cat /etc/os-release
[2025-05-28 22:58:44] 2025-05-28 19:58:26,304 | INFO     | cat /etc/os-release:
[2025-05-28 22:58:44] NAME="CentOS Linux"
[2025-05-28 22:58:44] VERSION="7 (Core)"
[2025-05-28 22:58:44] ID="centos"
[2025-05-28 22:58:44] ID_LIKE="rhel fedora"
[2025-05-28 22:58:44] VERSION_ID="7"
[2025-05-28 22:58:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 22:58:44] ANSI_COLOR="0;31"
[2025-05-28 22:58:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 22:58:44] HOME_URL="https://www.centos.org/"
[2025-05-28 22:58:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 22:58:44] 
[2025-05-28 22:58:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 22:58:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 22:58:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 22:58:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 22:58:44] 
[2025-05-28 22:58:44] 2025-05-28 19:58:26,304 | INFO     | **************************************
[2025-05-28 22:58:44] 2025-05-28 19:58:26,807 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2025-05-28 22:58:44] 2025-05-28 19:58:26,815 | INFO     | sufficient remaining disk space (131896180736 B)
[2025-05-28 22:58:44] 2025-05-28 19:58:26,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 22:58:44] 2025-05-28 19:58:26,816 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 22:58:44] 2025-05-28 19:58:26,816 | INFO     | update_server=False
[2025-05-28 22:58:44] 2025-05-28 19:58:26,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 22:58:44] 2025-05-28 19:58:26,816 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 22:58:44] 2025-05-28 19:58:26,816 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 22:58:44] 2025-05-28 19:58:26,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 22:58:44] 2025-05-28 19:58:26,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 22:58:44] 2025-05-28 19:58:26,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 22:58:44] 2025-05-28 19:58:26,835 | INFO     | all data control threads have been joined
[2025-05-28 22:58:44] 2025-05-28 19:58:26,890 | INFO     | all payload control threads have been joined
[2025-05-28 22:58:44] 2025-05-28 19:58:27,357 | INFO     | all job control threads have been joined
[2025-05-28 22:58:44] 2025-05-28 19:58:27,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 22:58:44] 2025-05-28 19:58:27,493 | INFO     | aborting loop
[2025-05-28 22:58:44] 2025-05-28 19:58:27,821 | INFO     | [job] retrieve thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:27,840 | INFO     | [data] control thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:27,847 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:27,849 | INFO     | [payload] validate_post thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:27,895 | INFO     | [payload] control thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:28,010 | INFO     | [payload] failed_post thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:28,362 | INFO     | [job] control thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:28,456 | INFO     | [data] copytool_in thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:28,498 | INFO     | [job] job monitor thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:28,821 | INFO     | [data] copytool_out thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:28,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 22:58:44] 2025-05-28 19:58:29,015 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:29,197 | INFO     | [job] validate thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:29,262 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:29,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 22:58:44] 2025-05-28 19:58:30,795 | INFO     | [job] queue monitor thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:32,962 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:37,215 | INFO     | job.realtimelogging is not enabled
[2025-05-28 22:58:44] 2025-05-28 19:58:38,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 22:58:44] 2025-05-28 19:58:39,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528954455872)>', '<ExcThread(monitor, started 140528159020800)>']
[2025-05-28 22:58:44] 2025-05-28 19:58:39,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 22:58:44] 2025-05-28 19:58:39,881 | INFO     | [monitor] control thread has ended
[2025-05-28 22:58:44] 2025-05-28 19:58:44,574 | INFO     | all workflow threads have been joined
[2025-05-28 22:58:44] 2025-05-28 19:58:44,574 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 22:58:44] 2025-05-28 19:58:44,574 | INFO     | traces error code: 0
[2025-05-28 22:58:44] 2025-05-28 19:58:44,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 22:58:44] 2025-05-28 19:58:44,619 [wrapper] ==== pilot stdout END ====
[2025-05-28 22:58:44] 2025-05-28 19:58:44,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 22:58:44] 2025-05-28 19:58:44,623 [wrapper] pilotpid: 1683593
[2025-05-28 22:58:44] 2025-05-28 19:58:44,624 [wrapper] Pilot exit status: 0
[2025-05-28 22:58:44] 2025-05-28 19:58:44,631 [wrapper] pandaids: 6666949714
[2025-05-28 22:58:44] 2025-05-28 19:58:44,652 [wrapper] cleanup supervisor_pilot 1748274 1683594
[2025-05-28 22:58:44] 2025-05-28 19:58:44,654 [wrapper] Test setup, not cleaning
[2025-05-28 22:58:44] 2025-05-28 19:58:44,655 [wrapper] apfmon messages muted
[2025-05-28 22:58:44] 2025-05-28 19:58:44,656 [wrapper] ==== wrapper stdout END ====
[2025-05-28 22:58:44] 2025-05-28 19:58:44,658 [wrapper] ==== wrapper stderr END ====
[2025-05-28 22:58:44]  *** Error codes and diagnostics ***
[2025-05-28 22:58:44]     "exeErrorCode": 0,
[2025-05-28 22:58:44]     "exeErrorDiag": "",
[2025-05-28 22:58:44]     "pilotErrorCode": 0,
[2025-05-28 22:58:44]     "pilotErrorDiag": "",
[2025-05-28 22:58:44]  *** Listing of results directory ***
[2025-05-28 22:58:44] total 419720
[2025-05-28 22:58:44] -rw-r--r-- 1 ek ek    495897 May 27 14:59 pilot3.tar.gz
[2025-05-28 22:58:44] -rwx------ 1 ek ek     37140 May 27 15:08 runpilot2-wrapper.sh
[2025-05-28 22:58:44] -rw-r--r-- 1 ek ek      5111 May 27 15:08 queuedata.json
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek       100 May 28 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 22:58:44] -rwxr-xr-x 1 ek ek      7986 May 28 21:41 run_atlas
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek       105 May 28 21:41 job.xml
[2025-05-28 22:58:44] -rw-r--r-- 2 ek ek 225831006 May 28 21:41 EVNT.44871834._002644.pool.root.1
[2025-05-28 22:58:44] drwxrwx--x 2 ek ek      4096 May 28 21:41 shared
[2025-05-28 22:58:44] -rw-r--r-- 2 ek ek    508883 May 28 21:41 input.tar.gz
[2025-05-28 22:58:44] -rw-r--r-- 2 ek ek     15093 May 28 21:41 start_atlas.sh
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek         0 May 28 21:41 boinc_setup_complete
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek      9842 May 28 21:41 init_data.xml
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek         0 May 28 21:41 boinc_lockfile
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek      2559 May 28 21:41 pandaJob.out
[2025-05-28 22:58:44] -rw------- 1 ek ek    992485 May 28 21:41 agis_schedconf.cvmfs.json
[2025-05-28 22:58:44] -rw------- 1 ek ek   1603667 May 28 21:41 agis_ddmendpoints.agis.ALL.json
[2025-05-28 22:58:44] drwx------ 4 ek ek      4096 May 28 21:41 pilot3
[2025-05-28 22:58:44] -rw------- 1 ek ek        95 May 28 22:57 pilot_heartbeat.json
[2025-05-28 22:58:44] -rw------- 1 ek ek 198732129 May 28 22:58 HITS.44871837._067147.pool.root.1
[2025-05-28 22:58:44] -rw------- 1 ek ek      1019 May 28 22:58 memory_monitor_summary.json
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek      8192 May 28 22:58 boinc_mmap_file
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek        27 May 28 22:58 wrapper_checkpoint.txt
[2025-05-28 22:58:44] -rw------- 1 ek ek    239696 May 28 22:58 log.44871837._067147.job.log.tgz.1
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek       529 May 28 22:58 boinc_task_state.xml
[2025-05-28 22:58:44] -rw------- 1 ek ek      7675 May 28 22:58 heartbeat.json
[2025-05-28 22:58:44] -rw------- 1 ek ek      4549 May 28 22:58 pilotlog.txt
[2025-05-28 22:58:44] -rw------- 1 ek ek    452601 May 28 22:58 log.44871837._067147.job.log.1
[2025-05-28 22:58:44] -rw------- 1 ek ek       357 May 28 22:58 output.list
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek       620 May 28 22:58 runtime_log
[2025-05-28 22:58:44] -rw------- 1 ek ek    706560 May 28 22:58 result.tar.gz
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek      8854 May 28 22:58 runtime_log.err
[2025-05-28 22:58:44] -rw------- 1 ek ek       661 May 28 22:58 DMGNDmuH8d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdnRKDmYKFhWo.diag
[2025-05-28 22:58:44] -rw-rw-r-- 1 ek ek     21033 May 28 22:58 stderr.txt
[2025-05-28 22:58:44] HITS file was successfully produced:
[2025-05-28 22:58:44] -rw------- 1 ek ek 198732129 May 28 22:58 shared/HITS.pool.root.1
[2025-05-28 22:58:44]  *** Contents of shared directory: ***
[2025-05-28 22:58:44] total 415832
[2025-05-28 22:58:44] -rw-r--r-- 2 ek ek 225831006 May 28 21:41 ATLAS.root_0
[2025-05-28 22:58:44] -rw-r--r-- 2 ek ek    508883 May 28 21:41 input.tar.gz
[2025-05-28 22:58:44] -rw-r--r-- 2 ek ek     15093 May 28 21:41 start_atlas.sh
[2025-05-28 22:58:44] -rw------- 1 ek ek 198732129 May 28 22:58 HITS.pool.root.1
[2025-05-28 22:58:44] -rw------- 1 ek ek    706560 May 28 22:58 result.tar.gz
22:58:46 (1679860): run_atlas exited; CPU time 17520.951881
22:58:46 (1679860): called boinc_finish(0)

</stderr_txt>
]]>

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