Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:33:04 (3369888): wrapper (7.7.26015): starting
10:33:04 (3369888): wrapper: running run_atlas (--nthreads 12)
[2025-05-27 10:33:04] Arguments: --nthreads 12
[2025-05-27 10:33:04] Threads: 12
[2025-05-27 10:33:04] Checking for CVMFS
[2025-05-27 10:33:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 10:33:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 10:33:05] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 10:33:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 10:33:05] 2.11.5.0 4147171 12683 238244 146488 2 294 36281384 45568000 13824 130560 0 137177931 99.799 78021094 25601 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-27 10:33:05] CVMFS is ok
[2025-05-27 10:33:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 10:33:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 10:33:05] Further information can be found at the LHC@home message board.
[2025-05-27 10:33:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 10:33:05] Checking for apptainer binary...
[2025-05-27 10:33:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 10:33:05] Running /usr/bin/apptainer --version
[2025-05-27 10:33:05] apptainer version 1.4.0-1.el9
[2025-05-27 10:33:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 10:33:05] wns0047.triumf.lcg
[2025-05-27 10:33:05] apptainer works
[2025-05-27 10:33:05] Set ATHENA_PROC_NUMBER=12
[2025-05-27 10:33:05] Set ATHENA_CORE_NUMBER=12
[2025-05-27 10:33:05] Starting ATLAS job with PandaID=6667103768
[2025-05-27 10:33:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 10:36:19]  *** The last 200 lines of the pilot log: ***
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 10:36:19] 2025-05-27 17:36:04,561 | WARNING  | found no stored workdir sizes
[2025-05-27 10:36:19] 2025-05-27 17:36:04,561 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 10:36:19] 2025-05-27 17:36:04,561 | WARNING  | wrong length of table data, x=[1748367225.0], y=[1308.0] (must be same and length>=4)
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | ..............................
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . Timing measurements:
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . get job = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . initial setup = 3 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . payload setup = 6 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . stage-in = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . payload execution = 20 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . stage-out = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . log creation = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | ..............................
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667103768/pilotlog.txt
[2025-05-27 10:36:19] 2025-05-27 17:36:04,571 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-27 10:36:19] - Log from pilotlog.txt -
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | INFO     | extracted standard info from prmon json
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 10:36:19] 2025-05-27 17:36:04,561 | WARNING  | found no stored workdir sizes
[2025-05-27 10:36:19] 2025-05-27 17:36:04,561 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 10:36:19] 2025-05-27 17:36:04,561 | WARNING  | wrong length of table data, x=[1748367225.0], y=[1308.0] (must be same and length>=4)
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | ..............................
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . Timing measurements:
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . get job = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . initial setup = 3 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . payload setup = 6 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . stage-in = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . payload execution = 20 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . stage-out = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . log creation = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | ..............................
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667103768/pilotlog.txt
[2025-05-27 10:36:19] 2025-05-27 17:36:04,572 | WARNING  | 
[2025-05-27 10:36:19] [begin log extracts]
[2025-05-27 10:36:19] - Log from pilotlog.txt -
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | INFO     | extracted standard info from prmon json
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 10:36:19] 2025-05-27 17:36:04,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 10:36:19] 2025-05-27 17:36:04,561 | WARNING  | found no stored workdir sizes
[2025-05-27 10:36:19] 2025-05-27 17:36:04,561 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 10:36:19] 2025-05-27 17:36:04,561 | WARNING  | wrong length of table data, x=[1748367225.0], y=[1308.0] (must be same and length>=4)
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | ..............................
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . Timing measurements:
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . get job = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . initial setup = 3 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . payload setup = 6 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . stage-in = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . payload execution = 20 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . stage-out = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | . log creation = 0 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | ..............................
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 10:36:19] 2025-05-27 17:36:04,562 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6667103768/pilotlog.txt
[2025-05-27 10:36:19] [end log extracts]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,572 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-27 10:36:19] 2025-05-27 17:36:04,573 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | 
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | job summary report
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | --------------------------------------------------
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | PanDA job id: 6667103768
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | task id: 44871837
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-27 10:33:56,357 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | pilot state: failed 
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | transexitcode: 65
[2025-05-27 10:36:19] 2025-05-27 17:36:04,831 | INFO     | exeerrorcode: 65
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | exitcode: 65
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | cpuconsumptiontime: 14 s
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | nevents: 0
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | neventsw: 0
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | pid: 3382283
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | pgrp: 3382283
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | corecount: 12
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | event service: False
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | sizes: {0: 2405230, 5: 2405436, 11: 2405492, 31: 2433028, 32: 2433028, 152: 2433170}
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | --------------------------------------------------
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | 
[2025-05-27 10:36:19] 2025-05-27 17:36:04,832 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,847 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,848 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 10:36:19] 2025-05-27 17:36:04,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,848 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 10:36:19] 2025-05-27 17:36:04,848 | INFO     | job 6667103768 has completed (purged errors)
[2025-05-27 10:36:19] 2025-05-27 17:36:04,848 | INFO     | overall cleanup function is called
[2025-05-27 10:36:19] 2025-05-27 17:36:05,855 | INFO     | --- collectZombieJob: --- 10, [3382283]
[2025-05-27 10:36:19] 2025-05-27 17:36:05,855 | INFO     | zombie collector waiting for pid 3382283
[2025-05-27 10:36:19] 2025-05-27 17:36:05,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 10:36:19] 2025-05-27 17:36:05,856 | INFO     | collected zombie processes
[2025-05-27 10:36:19] 2025-05-27 17:36:05,856 | INFO     | will attempt to kill all subprocesses of pid=3382283
[2025-05-27 10:36:19] 2025-05-27 17:36:06,045 | INFO     | process IDs to be killed: [3382283] (in reverse order)
[2025-05-27 10:36:19] 2025-05-27 17:36:06,143 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 10:36:19] 2025-05-27 17:36:06,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 10:36:19] 2025-05-27 17:36:06,150 | INFO     | did not find any defunct processes belonging to 3382283
[2025-05-27 10:36:19] 2025-05-27 17:36:06,156 | INFO     | did not find any defunct processes belonging to 3382283
[2025-05-27 10:36:19] 2025-05-27 17:36:06,156 | INFO     | ready for new job
[2025-05-27 10:36:19] 2025-05-27 17:36:06,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 10:36:19] 2025-05-27 17:36:06,157 | INFO     | **************************************
[2025-05-27 10:36:19] 2025-05-27 17:36:06,158 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 10:36:19] 2025-05-27 17:36:06,158 | INFO     | **************************************
[2025-05-27 10:36:19] 2025-05-27 17:36:06,158 | INFO     | 
[2025-05-27 10:36:19] 2025-05-27 17:36:06,159 | INFO     | architecture information:
[2025-05-27 10:36:19] 2025-05-27 17:36:06,160 | INFO     | executing command: cat /etc/os-release
[2025-05-27 10:36:19] 2025-05-27 17:36:06,170 | INFO     | cat /etc/os-release:
[2025-05-27 10:36:19] NAME="CentOS Linux"
[2025-05-27 10:36:19] VERSION="7 (Core)"
[2025-05-27 10:36:19] ID="centos"
[2025-05-27 10:36:19] ID_LIKE="rhel fedora"
[2025-05-27 10:36:19] VERSION_ID="7"
[2025-05-27 10:36:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 10:36:19] ANSI_COLOR="0;31"
[2025-05-27 10:36:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 10:36:19] HOME_URL="https://www.centos.org/"
[2025-05-27 10:36:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 10:36:19] 
[2025-05-27 10:36:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 10:36:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 10:36:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 10:36:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 10:36:19] 
[2025-05-27 10:36:19] 2025-05-27 17:36:06,170 | INFO     | **************************************
[2025-05-27 10:36:19] 2025-05-27 17:36:06,673 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-27 10:36:19] 2025-05-27 17:36:06,701 | INFO     | sufficient remaining disk space (2003713392640 B)
[2025-05-27 10:36:19] 2025-05-27 17:36:06,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 10:36:19] 2025-05-27 17:36:06,702 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 10:36:19] 2025-05-27 17:36:06,702 | INFO     | update_server=False
[2025-05-27 10:36:19] 2025-05-27 17:36:06,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 10:36:19] 2025-05-27 17:36:06,702 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 10:36:19] 2025-05-27 17:36:06,702 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 10:36:19] 2025-05-27 17:36:06,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 10:36:19] 2025-05-27 17:36:06,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 10:36:19] 2025-05-27 17:36:07,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 10:36:19] 2025-05-27 17:36:07,039 | INFO     | aborting loop
[2025-05-27 10:36:19] 2025-05-27 17:36:07,056 | INFO     | all payload control threads have been joined
[2025-05-27 10:36:19] 2025-05-27 17:36:07,181 | INFO     | all data control threads have been joined
[2025-05-27 10:36:19] 2025-05-27 17:36:07,566 | INFO     | all job control threads have been joined
[2025-05-27 10:36:19] 2025-05-27 17:36:07,712 | INFO     | [job] retrieve thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:07,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 10:36:19] 2025-05-27 17:36:07,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 10:36:19] 2025-05-27 17:36:08,044 | INFO     | [job] job monitor thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:08,061 | INFO     | [payload] control thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:08,134 | INFO     | [data] copytool_in thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:08,170 | INFO     | [payload] validate_post thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:08,185 | INFO     | [data] control thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:08,443 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:08,572 | INFO     | [job] control thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:08,718 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:08,857 | INFO     | [payload] failed_post thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:08,863 | INFO     | [job] validate thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:09,002 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:09,174 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:09,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 10:36:19] 2025-05-27 17:36:09,745 | INFO     | [data] copytool_out thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:10,656 | INFO     | [job] queue monitor thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:11,862 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 10:36:19] 2025-05-27 17:36:13,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610319746880)>', '<ExcThread(monitor, started 140609991968512)>']
[2025-05-27 10:36:19] 2025-05-27 17:36:14,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 10:36:19] 2025-05-27 17:36:14,749 | INFO     | [monitor] control thread has ended
[2025-05-27 10:36:19] 2025-05-27 17:36:18,943 | INFO     | all workflow threads have been joined
[2025-05-27 10:36:19] 2025-05-27 17:36:18,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 10:36:19] 2025-05-27 17:36:18,943 | INFO     | traces error code: 0
[2025-05-27 10:36:19] 2025-05-27 17:36:18,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 10:36:19] 2025-05-27 17:36:19,178 [wrapper] ==== pilot stdout END ====
[2025-05-27 10:36:19] 2025-05-27 17:36:19,179 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 10:36:19] 2025-05-27 17:36:19,181 [wrapper] pilotpid: 3373605
[2025-05-27 10:36:19] 2025-05-27 17:36:19,182 [wrapper] Pilot exit status: 0
[2025-05-27 10:36:19] 2025-05-27 17:36:19,216 [wrapper] pandaids: 6667103768
[2025-05-27 10:36:19] 2025-05-27 17:36:19,282 [wrapper] cleanup supervisor_pilot 3373611 3373606
[2025-05-27 10:36:19] 2025-05-27 17:36:19,285 [wrapper] Test setup, not cleaning
[2025-05-27 10:36:19] 2025-05-27 17:36:19,287 [wrapper] apfmon messages muted
[2025-05-27 10:36:19] 2025-05-27 17:36:19,288 [wrapper] ==== wrapper stdout END ====
[2025-05-27 10:36:19] 2025-05-27 17:36:19,290 [wrapper] ==== wrapper stderr END ====
[2025-05-27 10:36:19]  *** Error codes and diagnostics ***
[2025-05-27 10:36:19]     "exeErrorCode": 65,
[2025-05-27 10:36:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 10:36:19]     "pilotErrorCode": 1305,
[2025-05-27 10:36:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 10:36:19]  *** Listing of results directory ***
[2025-05-27 10:36:19] total 221512
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc      5111 May 27 07:40 queuedata.json
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc    495897 May 27 07:41 pilot3.tar.gz
[2025-05-27 10:36:19] -rwx------. 1 boinc boinc     37140 May 27 07:44 runpilot2-wrapper.sh
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc       100 May 27 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 10:36:19] -rwxr-xr-x. 1 boinc boinc      7986 May 27 10:33 run_atlas
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc       105 May 27 10:33 job.xml
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc      6602 May 27 10:33 init_data.xml
[2025-05-27 10:36:19] -rw-r--r--. 2 boinc boinc 222797235 May 27 10:33 EVNT.44871834._002714.pool.root.1
[2025-05-27 10:36:19] -rw-r--r--. 2 boinc boinc     15093 May 27 10:33 start_atlas.sh
[2025-05-27 10:36:19] drwxrwx--x. 2 boinc boinc      4096 May 27 10:33 shared
[2025-05-27 10:36:19] -rw-r--r--. 2 boinc boinc    508873 May 27 10:33 input.tar.gz
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc         0 May 27 10:33 boinc_lockfile
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc      2558 May 27 10:33 pandaJob.out
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc    991119 May 27 10:33 agis_schedconf.cvmfs.json
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc   1603667 May 27 10:33 agis_ddmendpoints.agis.ALL.json
[2025-05-27 10:36:19] drwx------. 4 boinc boinc      4096 May 27 10:33 pilot3
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc       522 May 27 10:33 boinc_task_state.xml
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc       946 May 27 10:34 memory_monitor_summary.json
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc     20520 May 27 10:34 log.44871837._069007.job.log.tgz.1
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc        95 May 27 10:35 pilot_heartbeat.json
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc      8314 May 27 10:36 heartbeat.json
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc      8192 May 27 10:36 boinc_mmap_file
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc      4475 May 27 10:36 pilotlog.txt
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc        22 May 27 10:36 wrapper_checkpoint.txt
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc     73992 May 27 10:36 log.44871837._069007.job.log.1
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc       188 May 27 10:36 output.list
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc       620 May 27 10:36 runtime_log
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc    112640 May 27 10:36 result.tar.gz
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc      8484 May 27 10:36 runtime_log.err
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc       645 May 27 10:36 Ek9LDmriAe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyxRKDmCZKipm.diag
[2025-05-27 10:36:19] -rw-r--r--. 1 boinc boinc     21471 May 27 10:36 stderr.txt
[2025-05-27 10:36:19] No HITS result produced
[2025-05-27 10:36:19]  *** Contents of shared directory: ***
[2025-05-27 10:36:19] total 218208
[2025-05-27 10:36:19] -rw-r--r--. 2 boinc boinc 222797235 May 27 10:33 ATLAS.root_0
[2025-05-27 10:36:19] -rw-r--r--. 2 boinc boinc     15093 May 27 10:33 start_atlas.sh
[2025-05-27 10:36:19] -rw-r--r--. 2 boinc boinc    508873 May 27 10:33 input.tar.gz
[2025-05-27 10:36:19] -rw-------. 1 boinc boinc    112640 May 27 10:36 result.tar.gz
10:36:21 (3369888): run_atlas exited; CPU time 19.694666
10:36:21 (3369888): called boinc_finish(0)

</stderr_txt>
]]>

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