Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:42:08 (8392): wrapper (7.7.26015): starting
05:42:08 (8392): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 05:42:08] Arguments: --nthreads 8
[2025-05-28 05:42:08] Threads: 8
[2025-05-28 05:42:08] Checking for CVMFS
[2025-05-28 05:42:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 05:42:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 05:42:09] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 05:42:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 05:42:10] 2.11.2.0 11048 22652 96432 146504 3 18 20929539 25165825 3845 130560 0 12229205 99.724 14276435 5223 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 05:42:10] CVMFS is ok
[2025-05-28 05:42:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 05:42:10] Checking for apptainer binary...
[2025-05-28 05:42:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 05:42:10] Running /usr/bin/apptainer --version
[2025-05-28 05:42:10] apptainer version 1.3.2-1.el7
[2025-05-28 05:42:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 05:42:20] cg-vwn330.simple-grid.lan
[2025-05-28 05:42:20] apptainer works
[2025-05-28 05:42:20] Set ATHENA_PROC_NUMBER=8
[2025-05-28 05:42:20] Set ATHENA_CORE_NUMBER=8
[2025-05-28 05:42:20] Starting ATLAS job with PandaID=6666907279
[2025-05-28 05:42:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 11:10:13]  *** The last 200 lines of the pilot log: ***
[2025-05-28 11:10:13] 2025-05-28 09:09:52,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 11:10:13] 2025-05-28 09:09:52,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 11:10:13] 2025-05-28 09:09:52,490 | INFO     | fitting pss+swap vs Time
[2025-05-28 11:10:13] 2025-05-28 09:09:52,491 | INFO     | sum of square deviations: 9327281860.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,494 | INFO     | sum of deviations: 128940985894.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,494 | INFO     | mean x: 1748413875.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,494 | INFO     | mean y: 2464303.990353698
[2025-05-28 11:10:13] 2025-05-28 09:09:52,494 | INFO     | -- intersect: -24167729346.965626
[2025-05-28 11:10:13] 2025-05-28 09:09:52,494 | INFO     | intersect: -24167729346.965626
[2025-05-28 11:10:13] 2025-05-28 09:09:52,495 | INFO     | chi2: 5.2792591689923745
[2025-05-28 11:10:13] 2025-05-28 09:09:52,495 | INFO     | sum of square deviations: 8884603792.5
[2025-05-28 11:10:13] 2025-05-28 09:09:52,498 | INFO     | sum of deviations: 126656637947.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,498 | INFO     | mean x: 1748413722.5
[2025-05-28 11:10:13] 2025-05-28 09:09:52,499 | INFO     | mean y: 2463516.9803921566
[2025-05-28 11:10:13] 2025-05-28 09:09:52,499 | INFO     | -- intersect: -24922475062.631462
[2025-05-28 11:10:13] 2025-05-28 09:09:52,499 | INFO     | intersect: -24922475062.631462
[2025-05-28 11:10:13] 2025-05-28 09:09:52,499 | INFO     | chi2: 5.284112745008517
[2025-05-28 11:10:13] 2025-05-28 09:09:52,500 | INFO     | current chi2=5.284112745008517 (change=-0.09193668772030548 %)
[2025-05-28 11:10:13] 2025-05-28 09:09:52,500 | INFO     | right removable region: 305
[2025-05-28 11:10:13] 2025-05-28 09:09:52,500 | INFO     | sum of square deviations: 8884603792.5
[2025-05-28 11:10:13] 2025-05-28 09:09:52,503 | INFO     | sum of deviations: 23813035613.00001
[2025-05-28 11:10:13] 2025-05-28 09:09:52,503 | INFO     | mean x: 1748414027.5
[2025-05-28 11:10:13] 2025-05-28 09:09:52,503 | INFO     | mean y: 2500478.9281045753
[2025-05-28 11:10:13] 2025-05-28 09:09:52,503 | INFO     | -- intersect: -4683701233.102407
[2025-05-28 11:10:13] 2025-05-28 09:09:52,504 | INFO     | intersect: -4683701233.102407
[2025-05-28 11:10:13] 2025-05-28 09:09:52,504 | INFO     | chi2: 0.8372045885001559
[2025-05-28 11:10:13] 2025-05-28 09:09:52,504 | INFO     | current chi2=0.8372045885001559 (change=84.14162741966788 %)
[2025-05-28 11:10:13] 2025-05-28 09:09:52,505 | INFO     | sum of square deviations: 8456158550.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,508 | INFO     | sum of deviations: -13699504988.999998
[2025-05-28 11:10:13] 2025-05-28 09:09:52,508 | INFO     | mean x: 1748414180.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,508 | INFO     | mean y: 2513759.2790697673
[2025-05-28 11:10:13] 2025-05-28 09:09:52,508 | INFO     | -- intersect: 2835053929.8685083
[2025-05-28 11:10:13] 2025-05-28 09:09:52,508 | INFO     | intersect: 2835053929.8685083
[2025-05-28 11:10:13] 2025-05-28 09:09:52,509 | INFO     | chi2: 0.10129497081762535
[2025-05-28 11:10:13] 2025-05-28 09:09:52,509 | INFO     | current chi2=0.10129497081762535 (change=87.90081036236384 %)
[2025-05-28 11:10:13] 2025-05-28 09:09:52,509 | INFO     | sum of square deviations: 8041713570.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,512 | INFO     | sum of deviations: -10161187423.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,512 | INFO     | mean x: 1748414332.5
[2025-05-28 11:10:13] 2025-05-28 09:09:52,512 | INFO     | mean y: 2512436.641891892
[2025-05-28 11:10:13] 2025-05-28 09:09:52,513 | INFO     | -- intersect: 2211738812.45671
[2025-05-28 11:10:13] 2025-05-28 09:09:52,513 | INFO     | intersect: 2211738812.45671
[2025-05-28 11:10:13] 2025-05-28 09:09:52,513 | INFO     | chi2: 0.08162872314857529
[2025-05-28 11:10:13] 2025-05-28 09:09:52,514 | INFO     | current chi2=0.08162872314857529 (change=19.414831269814762 %)
[2025-05-28 11:10:13] 2025-05-28 09:09:52,514 | INFO     | left removable region: 30
[2025-05-28 11:10:13] 2025-05-28 09:09:52,514 | INFO     | sum of square deviations: 6448679050.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,517 | INFO     | sum of deviations: 6554511060.999999
[2025-05-28 11:10:13] 2025-05-28 09:09:52,517 | INFO     | mean x: 1748414607.0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,517 | INFO     | mean y: 2505744.9345454546
[2025-05-28 11:10:13] 2025-05-28 09:09:52,517 | INFO     | -- intersect: -1774602836.82926
[2025-05-28 11:10:13] 2025-05-28 09:09:52,517 | INFO     | intersect: -1774602836.82926
[2025-05-28 11:10:13] 2025-05-28 09:09:52,518 | INFO     | chi2: 0.0006573971306514458
[2025-05-28 11:10:13] 2025-05-28 09:09:52,518 | INFO     | -- intersect: -1774602836.82926
[2025-05-28 11:10:13] 2025-05-28 09:09:52,518 | INFO     | current memory leak: 1.02 B/s (using 275 data points, chi2=0.00)
[2025-05-28 11:10:13] 2025-05-28 09:09:52,519 | INFO     | ..............................
[2025-05-28 11:10:13] 2025-05-28 09:09:52,519 | INFO     | . Timing measurements:
[2025-05-28 11:10:13] 2025-05-28 09:09:52,519 | INFO     | . get job = 0 s
[2025-05-28 11:10:13] 2025-05-28 09:09:52,519 | INFO     | . initial setup = 5 s
[2025-05-28 11:10:13] 2025-05-28 09:09:52,519 | INFO     | . payload setup = 163 s
[2025-05-28 11:10:13] 2025-05-28 09:09:52,519 | INFO     | . stage-in = 0 s
[2025-05-28 11:10:13] 2025-05-28 09:09:52,519 | INFO     | . payload execution = 19108 s
[2025-05-28 11:10:13] 2025-05-28 09:09:52,519 | INFO     | . stage-out = 1 s
[2025-05-28 11:10:13] 2025-05-28 09:09:52,520 | INFO     | . log creation = 0 s
[2025-05-28 11:10:13] 2025-05-28 09:09:52,520 | INFO     | ..............................
[2025-05-28 11:10:13] 2025-05-28 09:09:52,636 | INFO     | 
[2025-05-28 11:10:13] 2025-05-28 09:09:52,636 | INFO     | job summary report
[2025-05-28 11:10:13] 2025-05-28 09:09:52,636 | INFO     | --------------------------------------------------
[2025-05-28 11:10:13] 2025-05-28 09:09:52,636 | INFO     | PanDA job id: 6666907279
[2025-05-28 11:10:13] 2025-05-28 09:09:52,636 | INFO     | task id: 44871837
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | errors: (none)
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | pilot state: finished 
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | transexitcode: 0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | exeerrorcode: 0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | exeerrordiag: 
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | exitcode: 0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | exitmsg: OK
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | cpuconsumptiontime: 72286 s
[2025-05-28 11:10:13] 2025-05-28 09:09:52,637 | INFO     | nevents: 400
[2025-05-28 11:10:13] 2025-05-28 09:09:52,638 | INFO     | neventsw: 0
[2025-05-28 11:10:13] 2025-05-28 09:09:52,638 | INFO     | pid: 27072
[2025-05-28 11:10:13] 2025-05-28 09:09:52,638 | INFO     | pgrp: 27072
[2025-05-28 11:10:13] 2025-05-28 09:09:52,638 | INFO     | corecount: 8
[2025-05-28 11:10:13] 2025-05-28 09:09:52,638 | INFO     | event service: False
[2025-05-28 11:10:13] 2025-05-28 09:09:52,638 | INFO     | sizes: {0: 2404406, 1: 2405091, 2: 2405290, 13: 2405290, 23: 2405346, 34: 2405374, 45: 2405530, 56: 2405558, 66: 2405586, 77: 2405614, 79: 2405876, 88: 2406212, 19
[2025-05-28 11:10:13] 2025-05-28 09:09:52,638 | INFO     | --------------------------------------------------
[2025-05-28 11:10:13] 2025-05-28 09:09:52,638 | INFO     | 
[2025-05-28 11:10:13] 2025-05-28 09:09:52,638 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-28 11:10:13] 2025-05-28 09:09:52,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 11:10:13] 2025-05-28 09:09:52,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 11:10:13] 2025-05-28 09:09:52,666 | INFO     | job 6666907279 has completed (purged errors)
[2025-05-28 11:10:13] 2025-05-28 09:09:52,666 | INFO     | overall cleanup function is called
[2025-05-28 11:10:13] 2025-05-28 09:09:53,671 | INFO     | --- collectZombieJob: --- 10, [27072]
[2025-05-28 11:10:13] 2025-05-28 09:09:53,672 | INFO     | zombie collector waiting for pid 27072
[2025-05-28 11:10:13] 2025-05-28 09:09:53,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 11:10:13] 2025-05-28 09:09:53,672 | INFO     | collected zombie processes
[2025-05-28 11:10:13] 2025-05-28 09:09:53,672 | INFO     | will attempt to kill all subprocesses of pid=27072
[2025-05-28 11:10:13] 2025-05-28 09:09:53,774 | INFO     | process IDs to be killed: [27072] (in reverse order)
[2025-05-28 11:10:13] 2025-05-28 09:09:53,908 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 11:10:13] 2025-05-28 09:09:53,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 11:10:13] 2025-05-28 09:09:53,911 | INFO     | did not find any defunct processes belonging to 27072
[2025-05-28 11:10:13] 2025-05-28 09:09:53,914 | INFO     | did not find any defunct processes belonging to 27072
[2025-05-28 11:10:13] 2025-05-28 09:09:53,914 | INFO     | ready for new job
[2025-05-28 11:10:13] 2025-05-28 09:09:53,914 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 11:10:13] 2025-05-28 09:09:53,916 | INFO     | **************************************
[2025-05-28 11:10:13] 2025-05-28 09:09:53,917 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 11:10:13] 2025-05-28 09:09:53,917 | INFO     | **************************************
[2025-05-28 11:10:13] 2025-05-28 09:09:53,917 | INFO     | 
[2025-05-28 11:10:13] 2025-05-28 09:09:53,917 | INFO     | pilot is running in a VM
[2025-05-28 11:10:13] 2025-05-28 09:09:53,918 | INFO     | architecture information:
[2025-05-28 11:10:13] 2025-05-28 09:09:53,919 | INFO     | executing command: cat /etc/os-release
[2025-05-28 11:10:13] 2025-05-28 09:09:53,967 | INFO     | cat /etc/os-release:
[2025-05-28 11:10:13] NAME="CentOS Linux"
[2025-05-28 11:10:13] VERSION="7 (Core)"
[2025-05-28 11:10:13] ID="centos"
[2025-05-28 11:10:13] ID_LIKE="rhel fedora"
[2025-05-28 11:10:13] VERSION_ID="7"
[2025-05-28 11:10:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 11:10:13] ANSI_COLOR="0;31"
[2025-05-28 11:10:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 11:10:13] HOME_URL="https://www.centos.org/"
[2025-05-28 11:10:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 11:10:13] 
[2025-05-28 11:10:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 11:10:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 11:10:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 11:10:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 11:10:13] 
[2025-05-28 11:10:13] 2025-05-28 09:09:53,967 | INFO     | **************************************
[2025-05-28 11:10:13] 2025-05-28 09:09:54,470 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-28 11:10:13] 2025-05-28 09:09:54,497 | INFO     | sufficient remaining disk space (496514367488 B)
[2025-05-28 11:10:13] 2025-05-28 09:09:54,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 11:10:13] 2025-05-28 09:09:54,498 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 11:10:13] 2025-05-28 09:09:54,498 | INFO     | update_server=False
[2025-05-28 11:10:13] 2025-05-28 09:09:54,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 11:10:13] 2025-05-28 09:09:54,498 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 11:10:13] 2025-05-28 09:09:54,498 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 11:10:13] 2025-05-28 09:09:54,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 11:10:13] 2025-05-28 09:09:54,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 11:10:13] 2025-05-28 09:09:54,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 11:10:13] 2025-05-28 09:09:54,792 | INFO     | all data control threads have been joined
[2025-05-28 11:10:13] 2025-05-28 09:09:54,890 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 11:10:13] 2025-05-28 09:09:54,890 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 11:10:13] 2025-05-28 09:09:54,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 11:10:13] 2025-05-28 09:09:54,891 | INFO     | will abort loop
[2025-05-28 11:10:13] 2025-05-28 09:09:55,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 11:10:13] 2025-05-28 09:09:55,148 | INFO     | all payload control threads have been joined
[2025-05-28 11:10:13] 2025-05-28 09:09:55,501 | INFO     | [job] queue monitor thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:55,503 | INFO     | [job] retrieve thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:55,532 | INFO     | all job control threads have been joined
[2025-05-28 11:10:13] 2025-05-28 09:09:55,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 11:10:13] 2025-05-28 09:09:55,677 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:55,795 | INFO     | [data] control thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:55,801 | INFO     | [job] validate thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:55,894 | INFO     | [job] job monitor thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:55,930 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:56,059 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:56,099 | INFO     | [data] copytool_in thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:56,152 | INFO     | [payload] control thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:56,537 | INFO     | [job] control thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:56,816 | INFO     | [payload] failed_post thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:57,043 | INFO     | [payload] validate_post thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:57,063 | INFO     | [data] copytool_out thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:09:59,677 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:10:05,218 | INFO     | job.realtimelogging is not enabled
[2025-05-28 11:10:13] 2025-05-28 09:10:06,224 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 11:10:13] 2025-05-28 09:10:08,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232848316224)>', '<ExcThread(monitor, started 140232267646720)>']
[2025-05-28 11:10:13] 2025-05-28 09:10:08,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 11:10:13] 2025-05-28 09:10:08,539 | INFO     | [monitor] control thread has ended
[2025-05-28 11:10:13] 2025-05-28 09:10:13,043 | INFO     | all workflow threads have been joined
[2025-05-28 11:10:13] 2025-05-28 09:10:13,043 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 11:10:13] 2025-05-28 09:10:13,043 | INFO     | traces error code: 0
[2025-05-28 11:10:13] 2025-05-28 09:10:13,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 11:10:13] 2025-05-28 09:10:13,227 [wrapper] ==== pilot stdout END ====
[2025-05-28 11:10:13] 2025-05-28 09:10:13,231 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 11:10:13] 2025-05-28 09:10:13,234 [wrapper] pilotpid: 14432
[2025-05-28 11:10:13] 2025-05-28 09:10:13,238 [wrapper] Pilot exit status: 0
[2025-05-28 11:10:13] 2025-05-28 09:10:13,255 [wrapper] pandaids: 6666907279
[2025-05-28 11:10:13] 2025-05-28 09:10:13,294 [wrapper] cleanup supervisor_pilot  4322 14433
[2025-05-28 11:10:13] 2025-05-28 09:10:13,298 [wrapper] Test setup, not cleaning
[2025-05-28 11:10:13] 2025-05-28 09:10:13,302 [wrapper] apfmon messages muted
[2025-05-28 11:10:13] 2025-05-28 09:10:13,306 [wrapper] ==== wrapper stdout END ====
[2025-05-28 11:10:13] 2025-05-28 09:10:13,310 [wrapper] ==== wrapper stderr END ====
[2025-05-28 11:10:13]  *** Error codes and diagnostics ***
[2025-05-28 11:10:13]     "exeErrorCode": 0,
[2025-05-28 11:10:13]     "exeErrorDiag": "",
[2025-05-28 11:10:13]     "pilotErrorCode": 0,
[2025-05-28 11:10:13]     "pilotErrorDiag": "",
[2025-05-28 11:10:13]  *** Listing of results directory ***
[2025-05-28 11:10:13] total 423116
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc    495897 May 27 12:25 pilot3.tar.gz
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc      5111 May 27 12:38 queuedata.json
[2025-05-28 11:10:13] -rwx------. 1 boinc boinc     37140 May 27 12:41 runpilot2-wrapper.sh
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc       100 May 28 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 11:10:13] -rwxr-xr-x. 1 boinc boinc      7986 May 28 05:42 run_atlas
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc       105 May 28 05:42 job.xml
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc      6370 May 28 05:42 init_data.xml
[2025-05-28 11:10:13] -rw-r--r--. 2 boinc boinc 223847280 May 28 05:42 EVNT.44871834._002602.pool.root.1
[2025-05-28 11:10:13] -rw-r--r--. 2 boinc boinc     15093 May 28 05:42 start_atlas.sh
[2025-05-28 11:10:13] drwxrwx--x. 2 boinc boinc        68 May 28 05:42 shared
[2025-05-28 11:10:13] -rw-r--r--. 2 boinc boinc    508876 May 28 05:42 input.tar.gz
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc         0 May 28 05:42 boinc_lockfile
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc      2559 May 28 05:42 pandaJob.out
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc    991169 May 28 05:45 agis_schedconf.cvmfs.json
[2025-05-28 11:10:13] drwx------. 4 boinc boinc      4096 May 28 05:45 pilot3
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc       531 May 28 11:08 boinc_task_state.xml
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc 201414455 May 28 11:08 HITS.44871837._066074.pool.root.1
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc        95 May 28 11:09 pilot_heartbeat.json
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc      1020 May 28 11:09 memory_monitor_summary.json
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc   1603667 May 28 11:09 agis_ddmendpoints.agis.ALL.json
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc    437806 May 28 11:09 log.44871837._066074.job.log.tgz.1
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc      7704 May 28 11:09 heartbeat.json
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc      8192 May 28 11:10 boinc_mmap_file
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc        28 May 28 11:10 wrapper_checkpoint.txt
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc      4797 May 28 11:10 pilotlog.txt
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc   1656255 May 28 11:10 log.44871837._066074.job.log.1
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc       357 May 28 11:10 output.list
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc       620 May 28 11:10 runtime_log
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc   2109440 May 28 11:10 result.tar.gz
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc      8659 May 28 11:10 runtime_log.err
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc       658 May 28 11:10 b1YKDmhv6d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTBZKDmQgaVwn.diag
[2025-05-28 11:10:13] -rw-r--r--. 1 boinc boinc     20534 May 28 11:10 stderr.txt
[2025-05-28 11:10:13] HITS file was successfully produced:
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc 201414455 May 28 11:08 shared/HITS.pool.root.1
[2025-05-28 11:10:13]  *** Contents of shared directory: ***
[2025-05-28 11:10:13] total 417876
[2025-05-28 11:10:13] -rw-r--r--. 2 boinc boinc 223847280 May 28 05:42 ATLAS.root_0
[2025-05-28 11:10:13] -rw-r--r--. 2 boinc boinc     15093 May 28 05:42 start_atlas.sh
[2025-05-28 11:10:13] -rw-r--r--. 2 boinc boinc    508876 May 28 05:42 input.tar.gz
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc 201414455 May 28 11:08 HITS.pool.root.1
[2025-05-28 11:10:13] -rw-------. 1 boinc boinc   2109440 May 28 11:10 result.tar.gz
11:10:14 (8392): run_atlas exited; CPU time 72555.003198
11:10:14 (8392): called boinc_finish(0)

</stderr_txt>
]]>

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