Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-28 09:49:58 (12408): Detected: vboxwrapper 26206
2025-05-28 09:49:58 (12408): Detected: BOINC client v7.16.20
2025-05-28 09:49:58 (12408): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-05-28 09:49:59 (12408): Successfully copied 'init_data.xml' to the shared directory.
2025-05-28 09:49:59 (12408): Create VM. (boinc_eb85d3a63778dec2, slot#2)
2025-05-28 09:50:00 (12408): Setting Memory Size for VM. (4800MB)
2025-05-28 09:50:00 (12408): Setting CPU Count for VM. (8)
2025-05-28 09:50:00 (12408): Setting Chipset Options for VM.
2025-05-28 09:50:01 (12408): Setting Graphics Controller Options for VM.
2025-05-28 09:50:01 (12408): Setting Boot Options for VM.
2025-05-28 09:50:01 (12408): Setting Network Configuration for NAT.
2025-05-28 09:50:01 (12408): Enabling VM Network Access.
2025-05-28 09:50:02 (12408): Disabling USB Support for VM.
2025-05-28 09:50:02 (12408): Disabling COM Port Support for VM.
2025-05-28 09:50:02 (12408): Disabling LPT Port Support for VM.
2025-05-28 09:50:02 (12408): Disabling Audio Support for VM.
2025-05-28 09:50:03 (12408): Disabling Clipboard Support for VM.
2025-05-28 09:50:03 (12408): Disabling Drag and Drop Support for VM.
2025-05-28 09:50:03 (12408): Adding storage controller(s) to VM.
2025-05-28 09:50:04 (12408): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-28 09:50:05 (12408): Adding VirtualBox Guest Additions to VM.
2025-05-28 09:50:05 (12408): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-28 09:50:05 (12408): forwarding host port 61469 to guest port 80
2025-05-28 09:50:05 (12408): Enabling remote desktop for VM.
2025-05-28 09:50:06 (12408): Required extension pack not installed, remote desktop not enabled.
2025-05-28 09:50:06 (12408): Enabling shared directory for VM.
2025-05-28 09:50:06 (12408): Starting VM using VBoxManage interface. (boinc_eb85d3a63778dec2, slot#2)
2025-05-28 09:50:10 (12408): Successfully started VM. (PID = '11172')
2025-05-28 09:50:10 (12408): Reporting VM Process ID to BOINC.
2025-05-28 09:50:10 (12408): Guest Log: BIOS: VirtualBox 6.0.14
2025-05-28 09:50:10 (12408): Guest Log: CPUID EDX: 0x178bfbff
2025-05-28 09:50:10 (12408): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-28 09:50:10 (12408): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-28 09:50:10 (12408): Detected: Web Application Enabled (http://localhost:61469)
2025-05-28 09:50:10 (12408): Preference change detected
2025-05-28 09:50:10 (12408): Setting CPU throttle for VM. (80%)
2025-05-28 09:50:10 (12408): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-28 09:50:12 (12408): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-28 09:50:12 (12408): Guest Log: BIOS: Booting from Hard Disk...
2025-05-28 09:50:15 (12408): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-28 09:50:15 (12408): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-28 09:50:15 (12408): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-28 09:50:20 (12408): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-28 09:50:20 (12408): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-28 09:50:25 (12408): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-28 09:50:25 (12408): Guest Log: 00:00:00.000153 main     Log opened 2025-05-28T09:50:23.793791000Z
2025-05-28 09:50:25 (12408): Guest Log: 00:00:00.000224 main     OS Product: Linux
2025-05-28 09:50:25 (12408): Guest Log: 00:00:00.000251 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-28 09:50:25 (12408): Guest Log: 00:00:00.000272 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-28 09:50:25 (12408): Guest Log: 00:00:00.000293 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-28 09:50:25 (12408): Guest Log: 00:00:00.000293 main     Process ID: 1363
2025-05-28 09:50:25 (12408): Guest Log: 00:00:00.000294 main     Package type: LINUX_64BITS_GENERIC
2025-05-28 09:50:25 (12408): Guest Log: 00:00:00.000964 main     5.2.32 r132073 started. Verbose level = 0
2025-05-28 09:50:25 (12408): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-28 09:50:25 (12408): Guest Log: [INFO] Mounting shared directory
2025-05-28 09:50:25 (12408): Guest Log: [INFO] Checking for init_data.xml
2025-05-28 09:50:27 (12408): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-28 09:50:27 (12408): Guest Log: [INFO] Detected branch: prod
2025-05-28 09:50:28 (12408): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-28 09:50:28 (12408): Guest Log: Copying input files
2025-05-28 09:50:28 (12408): Guest Log: Copied input files into RunAtlas.
2025-05-28 09:50:28 (12408): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-28 09:50:28 (12408): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-28 09:50:28 (12408): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-28 09:50:28 (12408): Guest Log: Further information can be found at the LHC@home message board.
2025-05-28 09:50:35 (12408): Guest Log: 00:00:10.002665 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 468 757 000ns (GuestNow=1 748 418 634 326 759 000 ns GuestLast=1 748 425 823 795 516 000 ns fSetTimeLastLoop=true )
2025-05-28 09:50:36 (12408): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-28 09:50:36 (12408): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-28 09:50:36 (12408): Guest Log: 2.6.3.0 1638 0 30168 146510 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-28 09:50:36 (12408): Guest Log: copied the webapp to /var/www
2025-05-28 09:50:36 (12408): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-28 09:50:36 (12408): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-28 09:50:36 (12408): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-28 09:50:36 (12408): Guest Log:  *** Starting ATLAS job. (PandaID=6666906661 taskID=44871837) ***
2025-05-28 11:30:15 (12408): Status Report: Elapsed Time: '6000.000000'
2025-05-28 11:30:15 (12408): Status Report: CPU Time: '35914.953125'
2025-05-28 12:03:03 (12408): Guest Log:  *** Job finished ***
2025-05-28 12:03:03 (12408): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:02:47,933 | INFO     | [data] queue_monitor thread has finished
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:02:54,311 | INFO     | job.realtimelogging is not enabled
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:02:55,313 | INFO     | [payload] run_realtimelog thread has finished
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:02:57,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140315258103616)>', '<ExcThread(monitor, started 140314148853504)>']
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:02:57,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:02:57,776 | INFO     | [monitor] control thread has ended
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,347 | INFO     | all workflow threads have been joined
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,347 | INFO     | end of generic workflow (traces error code: 0)
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,348 | INFO     | traces error code: 0
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,431 [wrapper] ==== pilot stdout END ====
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,435 [wrapper] ==== wrapper stdout RESUME ====
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,439 [wrapper] pilotpid: 5971
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,443 [wrapper] Pilot exit status: 0
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,506 [wrapper] pandaids: 6666906661
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,538 [wrapper] cleanup supervisor_pilot  3739 5972
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,542 [wrapper] Test setup, not cleaning
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,546 [wrapper] apfmon messages muted
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,549 [wrapper] ==== wrapper stdout END ====
2025-05-28 12:03:03 (12408): Guest Log: 2025-05-28 10:03:02,553 [wrapper] ==== wrapper stderr END ====
2025-05-28 12:03:03 (12408): Guest Log:  *** Error codes and diagnostics ***
2025-05-28 12:03:03 (12408): Guest Log:     "exeErrorCode": 0,
2025-05-28 12:03:03 (12408): Guest Log:     "exeErrorDiag": "",
2025-05-28 12:03:03 (12408): Guest Log:     "pilotErrorCode": 0,
2025-05-28 12:03:03 (12408): Guest Log:     "pilotErrorDiag": "",
2025-05-28 12:03:03 (12408): Guest Log:  *** Listing of results directory ***
2025-05-28 12:03:03 (12408): Guest Log: total 198344
2025-05-28 12:03:03 (12408): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 10:25 pilot3.tar.gz
2025-05-28 12:03:03 (12408): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 10:28 queuedata.json
2025-05-28 12:03:03 (12408): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 10:32 runpilot2-wrapper.sh
2025-05-28 12:03:03 (12408): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 28 07:50 start_atlas.sh
2025-05-28 12:03:03 (12408): Guest Log: -rwxr-xr-x. 1 atlas atlas    508869 May 28 07:50 input.tar.gz
2025-05-28 12:03:03 (12408): Guest Log: -rwxr-xr-x. 1 atlas atlas      9079 May 28 07:50 init_data.xml
2025-05-28 12:03:03 (12408): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 28 07:50 EVNT.44871834._002597.pool.root.1 -> /data/./ATLAS.root_0
2025-05-28 12:03:03 (12408): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 28 07:50 pandaJob.out
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas    991169 May 28 07:50 agis_schedconf.cvmfs.json
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas   1603667 May 28 07:50 agis_ddmendpoints.agis.ALL.json
2025-05-28 12:03:03 (12408): Guest Log: drwx------. 4 atlas atlas      4096 May 28 07:51 pilot3
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas        95 May 28 10:01 pilot_heartbeat.json
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas 197449711 May 28 10:01 HITS.44871837._065934.pool.root.1
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas      1027 May 28 10:02 memory_monitor_summary.json
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas    311023 May 28 10:02 log.44871837._065934.job.log.tgz.1
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas      7710 May 28 10:02 heartbeat.json
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas      4485 May 28 10:03 pilotlog.txt
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas    633849 May 28 10:03 log.44871837._065934.job.log.1
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas       357 May 28 10:03 output.list
2025-05-28 12:03:03 (12408): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 28 10:03 runtime_log
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas    962560 May 28 10:03 result.tar.gz
2025-05-28 12:03:03 (12408): Guest Log: -rw-r--r--. 1 atlas atlas      8631 May 28 10:03 runtime_log.err
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas       665 May 28 10:03 poBLDmrm6d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU9YKDmbghn9m.diag
2025-05-28 12:03:03 (12408): Guest Log: Looking for outputfile HITS.44871837._065934.pool.root.1
2025-05-28 12:03:03 (12408): Guest Log: HITS file was successfully produced
2025-05-28 12:03:03 (12408): Guest Log: -rw-------. 1 atlas atlas 197449711 May 28 10:01 /home/atlas/RunAtlas/HITS.44871837._065934.pool.root.1
2025-05-28 12:03:03 (12408): Guest Log: Successfully finished the ATLAS job!
2025-05-28 12:03:03 (12408): Guest Log: Copying the results back to the shared directory!
2025-05-28 12:03:03 (12408): Guest Log:  *** Contents of shared directory: ***
2025-05-28 12:03:03 (12408): Guest Log: total 415340
2025-05-28 12:03:03 (12408): Guest Log: -rwxrwxrwx. 1 root root 226350712 May 28 07:49 ATLAS.root_0
2025-05-28 12:03:03 (12408): Guest Log: -rwxrwxrwx. 1 root root 197449711 May 28 10:03 HITS.pool.root.1
2025-05-28 12:03:03 (12408): Guest Log: -rwxrwxrwx. 1 root root      9079 May 28 07:49 init_data.xml
2025-05-28 12:03:03 (12408): Guest Log: -rwxrwxrwx. 1 root root    508869 May 27 16:25 input.tar.gz
2025-05-28 12:03:03 (12408): Guest Log: -rwxrwxrwx. 1 root root    962560 May 28  2025 result.tar.gz
2025-05-28 12:03:03 (12408): Guest Log: -rwxrwxrwx. 1 root root     15093 May 27 16:25 start_atlas.sh
2025-05-28 12:03:03 (12408): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-28 12:03:03 (12408): VM Completion File Detected.
2025-05-28 12:03:03 (12408): Powering off VM.
2025-05-28 12:03:04 (12408): Successfully stopped VM.
2025-05-28 12:03:04 (12408): Deregistering VM. (boinc_eb85d3a63778dec2, slot#2)
2025-05-28 12:03:04 (12408): Removing network bandwidth throttle group from VM.
2025-05-28 12:03:04 (12408): Removing VM from VirtualBox.
12:03:10 (12408): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN