Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:02 (2327329): wrapper (7.7.26015): starting
10:57:02 (2327329): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 10:57:02] Arguments: --nthreads 8
[2025-05-27 10:57:02] Threads: 8
[2025-05-27 10:57:02] Checking for CVMFS
[2025-05-27 10:57:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 10:57:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 10:57:03] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 10:57:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 10:57:04] 2.12.6.0 3467197 79941 534076 146483 3 241 29510255 32935937 28182 16776704 0 636537494 99.672 540556730 16838 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-27 10:57:04] CVMFS is ok
[2025-05-27 10:57:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 10:57:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 10:57:04] Further information can be found at the LHC@home message board.
[2025-05-27 10:57:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 10:57:04] Checking for apptainer binary...
[2025-05-27 10:57:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 10:57:04] Running /usr/bin/apptainer --version
[2025-05-27 10:57:04] apptainer version 1.4.1-1.el9
[2025-05-27 10:57:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 10:57:05] lc-10-11.aglt2.org
[2025-05-27 10:57:05] apptainer works
[2025-05-27 10:57:05] Set ATHENA_PROC_NUMBER=8
[2025-05-27 10:57:05] Set ATHENA_CORE_NUMBER=8
[2025-05-27 10:57:05] Starting ATLAS job with PandaID=6666763052
[2025-05-27 10:57:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 15:14:00]  *** The last 200 lines of the pilot log: ***
[2025-05-27 15:14:00] 2025-05-27 19:13:39,870 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6666763052/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 15:14:00] 2025-05-27 19:13:39,871 | INFO     | extracted standard info from prmon json
[2025-05-27 15:14:00] 2025-05-27 19:13:39,871 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 15:14:00] 2025-05-27 19:13:39,871 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 15:14:00] 2025-05-27 19:13:39,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 15:14:00] 2025-05-27 19:13:39,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 15:14:00] 2025-05-27 19:13:39,890 | INFO     | fitting pss+swap vs Time
[2025-05-27 15:14:00] 2025-05-27 19:13:39,891 | INFO     | sum of square deviations: 4786970410.891567
[2025-05-27 15:14:00] 2025-05-27 19:13:39,918 | INFO     | sum of deviations: 46065742390.77104
[2025-05-27 15:14:00] 2025-05-27 19:13:39,918 | INFO     | mean x: 1748365553.1566265
[2025-05-27 15:14:00] 2025-05-27 19:13:39,918 | INFO     | mean y: 2075025.7751004016
[2025-05-27 15:14:00] 2025-05-27 19:13:39,918 | INFO     | -- intersect: -16822711898.615068
[2025-05-27 15:14:00] 2025-05-27 19:13:39,918 | INFO     | intersect: -16822711898.615068
[2025-05-27 15:14:00] 2025-05-27 19:13:39,919 | INFO     | chi2: 4.770100056685566
[2025-05-27 15:14:00] 2025-05-27 19:13:39,919 | INFO     | sum of square deviations: 4504338805.081953
[2025-05-27 15:14:00] 2025-05-27 19:13:39,939 | INFO     | sum of deviations: 75852034132.42627
[2025-05-27 15:14:00] 2025-05-27 19:13:39,939 | INFO     | mean x: 1748365400.6557376
[2025-05-27 15:14:00] 2025-05-27 19:13:39,939 | INFO     | mean y: 2090924.1598360655
[2025-05-27 15:14:00] 2025-05-27 19:13:39,940 | INFO     | -- intersect: -29439982104.820335
[2025-05-27 15:14:00] 2025-05-27 19:13:39,940 | INFO     | intersect: -29439982104.820335
[2025-05-27 15:14:00] 2025-05-27 19:13:39,940 | INFO     | chi2: 3.220816709046559
[2025-05-27 15:14:00] 2025-05-27 19:13:39,940 | INFO     | current chi2=3.220816709046559 (change=32.47905346278006 %)
[2025-05-27 15:14:00] 2025-05-27 19:13:39,941 | INFO     | sum of square deviations: 4233070889.958153
[2025-05-27 15:14:00] 2025-05-27 19:13:39,942 | INFO     | sum of deviations: 76422509804.49794
[2025-05-27 15:14:00] 2025-05-27 19:13:39,942 | INFO     | mean x: 1748365248.1589959
[2025-05-27 15:14:00] 2025-05-27 19:13:39,942 | INFO     | mean y: 2091248.9079497908
[2025-05-27 15:14:00] 2025-05-27 19:13:39,943 | INFO     | -- intersect: -31562336513.509045
[2025-05-27 15:14:00] 2025-05-27 19:13:39,969 | INFO     | intersect: -31562336513.509045
[2025-05-27 15:14:00] 2025-05-27 19:13:39,969 | INFO     | chi2: 3.2114493929542087
[2025-05-27 15:14:00] 2025-05-27 19:13:39,976 | INFO     | current chi2=3.2114493929542087 (change=0.2908366708990141 %)
[2025-05-27 15:14:00] 2025-05-27 19:13:39,976 | INFO     | right removable region: 238
[2025-05-27 15:14:00] 2025-05-27 19:13:39,976 | INFO     | sum of square deviations: 4504329960.766418
[2025-05-27 15:14:00] 2025-05-27 19:13:39,988 | INFO     | sum of deviations: -5016983871.442604
[2025-05-27 15:14:00] 2025-05-27 19:13:39,989 | INFO     | mean x: 1748365705.659836
[2025-05-27 15:14:00] 2025-05-27 19:13:39,989 | INFO     | mean y: 2102503.9344262294
[2025-05-27 15:14:00] 2025-05-27 19:13:39,989 | INFO     | -- intersect: 1949455966.7314272
[2025-05-27 15:14:00] 2025-05-27 19:13:39,989 | INFO     | intersect: 1949455966.7314272
[2025-05-27 15:14:00] 2025-05-27 19:13:39,989 | INFO     | chi2: 2.4016036507734597
[2025-05-27 15:14:00] 2025-05-27 19:13:39,989 | INFO     | current chi2=2.4016036507734597 (change=49.65297116970375 %)
[2025-05-27 15:14:00] 2025-05-27 19:13:39,998 | INFO     | sum of square deviations: 4233038560.6359844
[2025-05-27 15:14:00] 2025-05-27 19:13:40,000 | INFO     | sum of deviations: -29859508795.937237
[2025-05-27 15:14:00] 2025-05-27 19:13:40,000 | INFO     | mean x: 1748365858.1631799
[2025-05-27 15:14:00] 2025-05-27 19:13:40,000 | INFO     | mean y: 2116429.0753138075
[2025-05-27 15:14:00] 2025-05-27 19:13:40,000 | INFO     | -- intersect: 12334946610.640287
[2025-05-27 15:14:00] 2025-05-27 19:13:40,000 | INFO     | intersect: 12334946610.640287
[2025-05-27 15:14:00] 2025-05-27 19:13:40,000 | INFO     | chi2: 1.8415437712696436
[2025-05-27 15:14:00] 2025-05-27 19:13:40,001 | INFO     | current chi2=1.8415437712696436 (change=23.320246008263826 %)
[2025-05-27 15:14:00] 2025-05-27 19:13:40,001 | INFO     | left removable region: 20
[2025-05-27 15:14:00] 2025-05-27 19:13:40,001 | INFO     | sum of square deviations: 3212349684.220178
[2025-05-27 15:14:00] 2025-05-27 19:13:40,003 | INFO     | sum of deviations: -8926228632.100924
[2025-05-27 15:14:00] 2025-05-27 19:13:40,003 | INFO     | mean x: 1748365827.6697247
[2025-05-27 15:14:00] 2025-05-27 19:13:40,005 | INFO     | mean y: 2142569.651376147
[2025-05-27 15:14:00] 2025-05-27 19:13:40,005 | INFO     | -- intersect: 4860366189.263597
[2025-05-27 15:14:00] 2025-05-27 19:13:40,005 | INFO     | intersect: 4860366189.263597
[2025-05-27 15:14:00] 2025-05-27 19:13:40,005 | INFO     | chi2: 0.13402248102615422
[2025-05-27 15:14:00] 2025-05-27 19:13:40,005 | INFO     | -- intersect: 4860366189.263597
[2025-05-27 15:14:00] 2025-05-27 19:13:40,005 | INFO     | current memory leak: -2.78 B/s (using 218 data points, chi2=0.13)
[2025-05-27 15:14:00] 2025-05-27 19:13:40,006 | INFO     | ..............................
[2025-05-27 15:14:00] 2025-05-27 19:13:40,006 | INFO     | . Timing measurements:
[2025-05-27 15:14:00] 2025-05-27 19:13:40,006 | INFO     | . get job = 0 s
[2025-05-27 15:14:00] 2025-05-27 19:13:40,006 | INFO     | . initial setup = 3 s
[2025-05-27 15:14:00] 2025-05-27 19:13:40,006 | INFO     | . payload setup = 31 s
[2025-05-27 15:14:00] 2025-05-27 19:13:40,007 | INFO     | . stage-in = 0 s
[2025-05-27 15:14:00] 2025-05-27 19:13:40,036 | INFO     | . payload execution = 15196 s
[2025-05-27 15:14:00] 2025-05-27 19:13:40,036 | INFO     | . stage-out = 12 s
[2025-05-27 15:14:00] 2025-05-27 19:13:40,036 | INFO     | . log creation = 1 s
[2025-05-27 15:14:00] 2025-05-27 19:13:40,036 | INFO     | ..............................
[2025-05-27 15:14:00] 2025-05-27 19:13:40,697 | INFO     | 
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | job summary report
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | --------------------------------------------------
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | PanDA job id: 6666763052
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | task id: 44871837
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | errors: (none)
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | pilot state: finished 
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | transexitcode: 0
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | exeerrorcode: 0
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | exeerrordiag: 
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | exitcode: 0
[2025-05-27 15:14:00] 2025-05-27 19:13:40,698 | INFO     | exitmsg: OK
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | cpuconsumptiontime: 54786 s
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | nevents: 400
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | neventsw: 0
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | pid: 2355779
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | pgrp: 2355779
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | corecount: 8
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | event service: False
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | sizes: {0: 2404404, 1: 2405089, 2: 2405288, 13: 2405288, 24: 2405344, 26: 2405578, 35: 2405734, 15233: 2436301, 15235: 2436300, 15248: 2445297, 15252: 2445353, 152
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | --------------------------------------------------
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | 
[2025-05-27 15:14:00] 2025-05-27 19:13:40,699 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-27 15:14:00] 2025-05-27 19:13:40,902 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,902 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 15:14:00] 2025-05-27 19:13:40,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 15:14:00] 2025-05-27 19:13:40,904 | INFO     | job 6666763052 has completed (purged errors)
[2025-05-27 15:14:00] 2025-05-27 19:13:40,904 | INFO     | overall cleanup function is called
[2025-05-27 15:14:00] 2025-05-27 19:13:41,932 | INFO     | --- collectZombieJob: --- 10, [2355779]
[2025-05-27 15:14:00] 2025-05-27 19:13:41,932 | INFO     | zombie collector waiting for pid 2355779
[2025-05-27 15:14:00] 2025-05-27 19:13:41,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 15:14:00] 2025-05-27 19:13:41,932 | INFO     | collected zombie processes
[2025-05-27 15:14:00] 2025-05-27 19:13:41,932 | INFO     | will attempt to kill all subprocesses of pid=2355779
[2025-05-27 15:14:00] 2025-05-27 19:13:44,139 | INFO     | process IDs to be killed: [2355779] (in reverse order)
[2025-05-27 15:14:00] 2025-05-27 19:13:44,691 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 15:14:00] 2025-05-27 19:13:44,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 15:14:00] 2025-05-27 19:13:44,787 | INFO     | did not find any defunct processes belonging to 2355779
[2025-05-27 15:14:00] 2025-05-27 19:13:44,920 | INFO     | did not find any defunct processes belonging to 2355779
[2025-05-27 15:14:00] 2025-05-27 19:13:44,920 | INFO     | ready for new job
[2025-05-27 15:14:00] 2025-05-27 19:13:44,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 15:14:00] 2025-05-27 19:13:44,946 | INFO     | **************************************
[2025-05-27 15:14:00] 2025-05-27 19:13:44,946 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 15:14:00] 2025-05-27 19:13:44,946 | INFO     | **************************************
[2025-05-27 15:14:00] 2025-05-27 19:13:44,946 | INFO     | 
[2025-05-27 15:14:00] 2025-05-27 19:13:45,008 | INFO     | architecture information:
[2025-05-27 15:14:00] 2025-05-27 19:13:45,020 | INFO     | executing command: cat /etc/os-release
[2025-05-27 15:14:00] 2025-05-27 19:13:45,104 | INFO     | cat /etc/os-release:
[2025-05-27 15:14:00] NAME="CentOS Linux"
[2025-05-27 15:14:00] VERSION="7 (Core)"
[2025-05-27 15:14:00] ID="centos"
[2025-05-27 15:14:00] ID_LIKE="rhel fedora"
[2025-05-27 15:14:00] VERSION_ID="7"
[2025-05-27 15:14:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 15:14:00] ANSI_COLOR="0;31"
[2025-05-27 15:14:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 15:14:00] HOME_URL="https://www.centos.org/"
[2025-05-27 15:14:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 15:14:00] 
[2025-05-27 15:14:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 15:14:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 15:14:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 15:14:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 15:14:00] 
[2025-05-27 15:14:00] 2025-05-27 19:13:45,104 | INFO     | **************************************
[2025-05-27 15:14:00] 2025-05-27 19:13:45,608 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-27 15:14:00] 2025-05-27 19:13:45,685 | INFO     | sufficient remaining disk space (94006935552 B)
[2025-05-27 15:14:00] 2025-05-27 19:13:45,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 15:14:00] 2025-05-27 19:13:45,686 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 15:14:00] 2025-05-27 19:13:45,686 | INFO     | update_server=False
[2025-05-27 15:14:00] 2025-05-27 19:13:45,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 15:14:00] 2025-05-27 19:13:45,686 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 15:14:00] 2025-05-27 19:13:45,687 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 15:14:00] 2025-05-27 19:13:45,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 15:14:00] 2025-05-27 19:13:45,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 15:14:00] 2025-05-27 19:13:45,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 15:14:00] 2025-05-27 19:13:45,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 15:14:00] 2025-05-27 19:13:45,776 | INFO     | all job control threads have been joined
[2025-05-27 15:14:00] 2025-05-27 19:13:45,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 15:14:00] 2025-05-27 19:13:45,782 | INFO     | aborting loop
[2025-05-27 15:14:00] 2025-05-27 19:13:45,849 | INFO     | all data control threads have been joined
[2025-05-27 15:14:00] 2025-05-27 19:13:46,692 | INFO     | [job] retrieve thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:46,692 | INFO     | [job] queue monitor thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:46,782 | INFO     | [job] control thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:46,788 | INFO     | [job] job monitor thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:46,875 | INFO     | [data] control thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:47,004 | INFO     | [payload] validate_post thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:47,080 | INFO     | [payload] failed_post thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:47,114 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:47,178 | INFO     | all payload control threads have been joined
[2025-05-27 15:14:00] 2025-05-27 19:13:47,241 | INFO     | [job] validate thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:47,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:47,306 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:47,340 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:47,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 15:14:00] 2025-05-27 19:13:47,712 | INFO     | [data] copytool_out thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:48,009 | INFO     | [data] copytool_in thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:48,184 | INFO     | [payload] control thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:51,702 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 15:14:00] 2025-05-27 19:13:53,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831748990784)>', '<ExcThread(monitor, started 139831116035840)>']
[2025-05-27 15:14:00] 2025-05-27 19:13:53,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 15:14:00] 2025-05-27 19:13:53,747 | INFO     | [monitor] control thread has ended
[2025-05-27 15:14:00] 2025-05-27 19:13:58,071 | INFO     | all workflow threads have been joined
[2025-05-27 15:14:00] 2025-05-27 19:13:58,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 15:14:00] 2025-05-27 19:13:58,071 | INFO     | traces error code: 0
[2025-05-27 15:14:00] 2025-05-27 19:13:58,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 15:14:00] 2025-05-27 19:13:59,452 [wrapper] ==== pilot stdout END ====
[2025-05-27 15:14:00] 2025-05-27 19:13:59,477 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 15:14:00] 2025-05-27 19:13:59,485 [wrapper] pilotpid: 2342280
[2025-05-27 15:14:00] 2025-05-27 19:13:59,488 [wrapper] Pilot exit status: 0
[2025-05-27 15:14:00] 2025-05-27 19:13:59,565 [wrapper] pandaids: 6666763052
[2025-05-27 15:14:00] 2025-05-27 19:13:59,747 [wrapper] cleanup supervisor_pilot   30076 2342281
[2025-05-27 15:14:00] 2025-05-27 19:13:59,784 [wrapper] Test setup, not cleaning
[2025-05-27 15:14:00] 2025-05-27 19:13:59,814 [wrapper] apfmon messages muted
[2025-05-27 15:14:00] 2025-05-27 19:13:59,833 [wrapper] ==== wrapper stdout END ====
[2025-05-27 15:14:00] 2025-05-27 19:13:59,864 [wrapper] ==== wrapper stderr END ====
[2025-05-27 15:14:00]  *** Error codes and diagnostics ***
[2025-05-27 15:14:00]     "exeErrorCode": 0,
[2025-05-27 15:14:00]     "exeErrorDiag": "",
[2025-05-27 15:14:00]     "pilotErrorCode": 0,
[2025-05-27 15:14:00]     "pilotErrorDiag": "",
[2025-05-27 15:14:00]  *** Listing of results directory ***
[2025-05-27 15:14:00] total 418948
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas    495897 May 27 00:09 pilot3.tar.gz
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas      5111 May 27 00:18 queuedata.json
[2025-05-27 15:14:00] -rwx------. 1 boincer umatlas     37140 May 27 00:19 runpilot2-wrapper.sh
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas       100 May 27 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 15:14:00] -rwxr-xr-x. 1 boincer umatlas      7986 May 27 10:57 run_atlas
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas       105 May 27 10:57 job.xml
[2025-05-27 15:14:00] -rw-r--r--. 2 boincer umatlas 224166197 May 27 10:57 EVNT.44871834._002448.pool.root.1
[2025-05-27 15:14:00] -rw-r--r--. 2 boincer umatlas     15093 May 27 10:57 start_atlas.sh
[2025-05-27 15:14:00] drwxrwx--x. 2 boincer umatlas      4096 May 27 10:57 shared
[2025-05-27 15:14:00] -rw-r--r--. 2 boincer umatlas    508878 May 27 10:57 input.tar.gz
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas         0 May 27 10:57 boinc_lockfile
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas      2558 May 27 10:57 pandaJob.out
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas    990964 May 27 10:57 agis_schedconf.cvmfs.json
[2025-05-27 15:14:00] drwx------. 4 boincer umatlas      4096 May 27 10:57 pilot3
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas 197774241 May 27 15:10 HITS.44871837._062043.pool.root.1
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas       531 May 27 15:10 boinc_task_state.xml
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas      6867 May 27 15:12 init_data.xml
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas      1047 May 27 15:12 memory_monitor_summary.json
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas   1603667 May 27 15:12 agis_ddmendpoints.agis.ALL.json
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas    388680 May 27 15:12 log.44871837._062043.job.log.tgz.1
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas        95 May 27 15:13 pilot_heartbeat.json
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas      7732 May 27 15:13 heartbeat.json
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas      8192 May 27 15:13 boinc_mmap_file
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas        28 May 27 15:13 wrapper_checkpoint.txt
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas      4476 May 27 15:13 pilotlog.txt
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas   1221627 May 27 15:13 log.44871837._062043.job.log.1
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas       357 May 27 15:14 output.list
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas       620 May 27 15:14 runtime_log
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas   1628160 May 27 15:14 result.tar.gz
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas      8660 May 27 15:14 runtime_log.err
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas       655 May 27 15:14 1zKNDmCy0d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQIRKDmOaxiJm.diag
[2025-05-27 15:14:00] -rw-r--r--. 1 boincer umatlas     21002 May 27 15:14 stderr.txt
[2025-05-27 15:14:00] HITS file was successfully produced:
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas 197774241 May 27 15:10 shared/HITS.pool.root.1
[2025-05-27 15:14:00]  *** Contents of shared directory: ***
[2025-05-27 15:14:00] total 414172
[2025-05-27 15:14:00] -rw-r--r--. 2 boincer umatlas 224166197 May 27 10:57 ATLAS.root_0
[2025-05-27 15:14:00] -rw-r--r--. 2 boincer umatlas     15093 May 27 10:57 start_atlas.sh
[2025-05-27 15:14:00] -rw-r--r--. 2 boincer umatlas    508878 May 27 10:57 input.tar.gz
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas 197774241 May 27 15:10 HITS.pool.root.1
[2025-05-27 15:14:00] -rw-------. 1 boincer umatlas   1628160 May 27 15:14 result.tar.gz
15:14:22 (2327329): run_atlas exited; CPU time 55512.553725
15:14:22 (2327329): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN