Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:54:16 (85461): wrapper (7.7.26015): starting
10:54:16 (85461): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 10:54:16] Arguments: --nthreads 8
[2025-05-27 10:54:16] Threads: 8
[2025-05-27 10:54:16] Checking for CVMFS
[2025-05-27 10:54:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 10:54:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 10:54:17] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 10:54:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 10:54:18] 2.12.6.0 1699072 11919 316116 146483 1 69 28675635 32935937 25874 16776704 0 59406342 99.573 62177881 28419 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-27 10:54:18] CVMFS is ok
[2025-05-27 10:54:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 10:54:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 10:54:18] Further information can be found at the LHC@home message board.
[2025-05-27 10:54:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 10:54:18] Checking for apptainer binary...
[2025-05-27 10:54:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 10:54:18] Running /usr/bin/apptainer --version
[2025-05-27 10:54:18] apptainer version 1.4.1-1.el9
[2025-05-27 10:54:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 10:54:19] c6-2-11-3.aglt2.org
[2025-05-27 10:54:19] apptainer works
[2025-05-27 10:54:19] Set ATHENA_PROC_NUMBER=8
[2025-05-27 10:54:19] Set ATHENA_CORE_NUMBER=8
[2025-05-27 10:54:19] Starting ATLAS job with PandaID=6666850745
[2025-05-27 10:54:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 16:28:44]  *** The last 200 lines of the pilot log: ***
[2025-05-27 16:28:44] 2025-05-27 20:28:20,697 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6666850745/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 16:28:44] 2025-05-27 20:28:20,697 | INFO     | extracted standard info from prmon json
[2025-05-27 16:28:44] 2025-05-27 20:28:20,697 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 16:28:44] 2025-05-27 20:28:20,698 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 16:28:44] 2025-05-27 20:28:20,698 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 16:28:44] 2025-05-27 20:28:20,698 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 16:28:44] 2025-05-27 20:28:20,708 | INFO     | fitting pss+swap vs Time
[2025-05-27 16:28:44] 2025-05-27 20:28:20,709 | INFO     | sum of square deviations: 10644579451.076954
[2025-05-27 16:28:44] 2025-05-27 20:28:20,716 | INFO     | sum of deviations: 161575778894.9231
[2025-05-27 16:28:44] 2025-05-27 20:28:20,716 | INFO     | mean x: 1748367741.0769231
[2025-05-27 16:28:44] 2025-05-27 20:28:20,716 | INFO     | mean y: 2071317.8430769232
[2025-05-27 16:28:44] 2025-05-27 20:28:20,716 | INFO     | -- intersect: -26536683064.856377
[2025-05-27 16:28:44] 2025-05-27 20:28:20,716 | INFO     | intersect: -26536683064.856377
[2025-05-27 16:28:44] 2025-05-27 20:28:20,717 | INFO     | chi2: 3.6467028542998126
[2025-05-27 16:28:44] 2025-05-27 20:28:20,721 | INFO     | sum of square deviations: 10160740800.621906
[2025-05-27 16:28:44] 2025-05-27 20:28:20,724 | INFO     | sum of deviations: 177838253273.99683
[2025-05-27 16:28:44] 2025-05-27 20:28:20,725 | INFO     | mean x: 1748367588.565625
[2025-05-27 16:28:44] 2025-05-27 20:28:20,725 | INFO     | mean y: 2076374.690625
[2025-05-27 16:28:44] 2025-05-27 20:28:20,725 | INFO     | -- intersect: -30598707970.910423
[2025-05-27 16:28:44] 2025-05-27 20:28:20,729 | INFO     | intersect: -30598707970.910423
[2025-05-27 16:28:44] 2025-05-27 20:28:20,730 | INFO     | chi2: 2.958602508422202
[2025-05-27 16:28:44] 2025-05-27 20:28:20,730 | INFO     | current chi2=2.958602508422202 (change=18.86910925759345 %)
[2025-05-27 16:28:44] 2025-05-27 20:28:20,730 | INFO     | right removable region: 319
[2025-05-27 16:28:44] 2025-05-27 20:28:20,731 | INFO     | sum of square deviations: 10160804616.046875
[2025-05-27 16:28:44] 2025-05-27 20:28:20,738 | INFO     | sum of deviations: 91567221235.74995
[2025-05-27 16:28:44] 2025-05-27 20:28:20,738 | INFO     | mean x: 1748367893.578125
[2025-05-27 16:28:44] 2025-05-27 20:28:20,738 | INFO     | mean y: 2093336.65
[2025-05-27 16:28:44] 2025-05-27 20:28:20,738 | INFO     | -- intersect: -15753862590.296618
[2025-05-27 16:28:44] 2025-05-27 20:28:20,739 | INFO     | intersect: -15753862590.296618
[2025-05-27 16:28:44] 2025-05-27 20:28:20,739 | INFO     | chi2: 1.162968207195676
[2025-05-27 16:28:44] 2025-05-27 20:28:20,739 | INFO     | current chi2=1.162968207195676 (change=68.10904936155066 %)
[2025-05-27 16:28:44] 2025-05-27 20:28:20,740 | INFO     | sum of square deviations: 9691933178.171427
[2025-05-27 16:28:44] 2025-05-27 20:28:20,747 | INFO     | sum of deviations: 65046938052.476234
[2025-05-27 16:28:44] 2025-05-27 20:28:20,747 | INFO     | mean x: 1748368046.0761905
[2025-05-27 16:28:44] 2025-05-27 20:28:20,747 | INFO     | mean y: 2101942.396825397
[2025-05-27 16:28:44] 2025-05-27 20:28:20,747 | INFO     | -- intersect: -11731985147.90475
[2025-05-27 16:28:44] 2025-05-27 20:28:20,747 | INFO     | intersect: -11731985147.90475
[2025-05-27 16:28:44] 2025-05-27 20:28:20,748 | INFO     | chi2: 0.8697144078313254
[2025-05-27 16:28:44] 2025-05-27 20:28:20,748 | INFO     | current chi2=0.8697144078313254 (change=25.215977319920746 %)
[2025-05-27 16:28:44] 2025-05-27 20:28:20,749 | INFO     | sum of square deviations: 9237751606.077353
[2025-05-27 16:28:44] 2025-05-27 20:28:20,756 | INFO     | sum of deviations: 61292371307.37421
[2025-05-27 16:28:44] 2025-05-27 20:28:20,756 | INFO     | mean x: 1748368198.5677419
[2025-05-27 16:28:44] 2025-05-27 20:28:20,757 | INFO     | mean y: 2103189.577419355
[2025-05-27 16:28:44] 2025-05-27 20:28:20,757 | INFO     | -- intersect: -11598298875.587362
[2025-05-27 16:28:44] 2025-05-27 20:28:20,757 | INFO     | intersect: -11598298875.587362
[2025-05-27 16:28:44] 2025-05-27 20:28:20,757 | INFO     | chi2: 0.8511337466427156
[2025-05-27 16:28:44] 2025-05-27 20:28:20,758 | INFO     | current chi2=0.8511337466427156 (change=2.1364094950366024 %)
[2025-05-27 16:28:44] 2025-05-27 20:28:20,758 | INFO     | left removable region: 30
[2025-05-27 16:28:44] 2025-05-27 20:28:20,762 | INFO     | sum of square deviations: 7484639870.000015
[2025-05-27 16:28:44] 2025-05-27 20:28:20,764 | INFO     | sum of deviations: 69144326115.23532
[2025-05-27 16:28:44] 2025-05-27 20:28:20,765 | INFO     | mean x: 1748368473.0588236
[2025-05-27 16:28:44] 2025-05-27 20:28:20,765 | INFO     | mean y: 2112163.221453287
[2025-05-27 16:28:44] 2025-05-27 20:28:20,765 | INFO     | -- intersect: -16149601475.710794
[2025-05-27 16:28:44] 2025-05-27 20:28:20,765 | INFO     | intersect: -16149601475.710794
[2025-05-27 16:28:44] 2025-05-27 20:28:20,770 | INFO     | chi2: 0.13077882773575406
[2025-05-27 16:28:44] 2025-05-27 20:28:20,770 | INFO     | -- intersect: -16149601475.710794
[2025-05-27 16:28:44] 2025-05-27 20:28:20,770 | INFO     | current memory leak: 9.24 B/s (using 289 data points, chi2=0.13)
[2025-05-27 16:28:44] 2025-05-27 20:28:20,775 | INFO     | ..............................
[2025-05-27 16:28:44] 2025-05-27 20:28:20,775 | INFO     | . Timing measurements:
[2025-05-27 16:28:44] 2025-05-27 20:28:20,775 | INFO     | . get job = 0 s
[2025-05-27 16:28:44] 2025-05-27 20:28:20,775 | INFO     | . initial setup = 7 s
[2025-05-27 16:28:44] 2025-05-27 20:28:20,775 | INFO     | . payload setup = 46 s
[2025-05-27 16:28:44] 2025-05-27 20:28:20,775 | INFO     | . stage-in = 0 s
[2025-05-27 16:28:44] 2025-05-27 20:28:20,776 | INFO     | . payload execution = 19829 s
[2025-05-27 16:28:44] 2025-05-27 20:28:20,776 | INFO     | . stage-out = 3 s
[2025-05-27 16:28:44] 2025-05-27 20:28:20,776 | INFO     | . log creation = 0 s
[2025-05-27 16:28:44] 2025-05-27 20:28:20,776 | INFO     | ..............................
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | 
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | job summary report
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | --------------------------------------------------
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | PanDA job id: 6666850745
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | task id: 44871837
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | errors: (none)
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | pilot state: finished 
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | transexitcode: 0
[2025-05-27 16:28:44] 2025-05-27 20:28:20,993 | INFO     | exeerrorcode: 0
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | exeerrordiag: 
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | exitcode: 0
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | exitmsg: OK
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | cpuconsumptiontime: 55637 s
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | nevents: 400
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | neventsw: 0
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | pid: 119744
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | pgrp: 119744
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | corecount: 8
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | event service: False
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | sizes: {0: 2405063, 1: 2405262, 12: 2405262, 23: 2405290, 33: 2405524, 35: 2405580, 19879: 2438443, 19883: 2447384, 19886: 2447440, 19915: 2447610}
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | --------------------------------------------------
[2025-05-27 16:28:44] 2025-05-27 20:28:20,994 | INFO     | 
[2025-05-27 16:28:44] 2025-05-27 20:28:20,995 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-27 16:28:44] 2025-05-27 20:28:21,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | job 6666850745 has completed (purged errors)
[2025-05-27 16:28:44] 2025-05-27 20:28:21,091 | INFO     | overall cleanup function is called
[2025-05-27 16:28:44] 2025-05-27 20:28:22,104 | INFO     | --- collectZombieJob: --- 10, [119744]
[2025-05-27 16:28:44] 2025-05-27 20:28:22,104 | INFO     | zombie collector waiting for pid 119744
[2025-05-27 16:28:44] 2025-05-27 20:28:22,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 16:28:44] 2025-05-27 20:28:22,105 | INFO     | collected zombie processes
[2025-05-27 16:28:44] 2025-05-27 20:28:22,105 | INFO     | will attempt to kill all subprocesses of pid=119744
[2025-05-27 16:28:44] 2025-05-27 20:28:23,171 | INFO     | process IDs to be killed: [119744] (in reverse order)
[2025-05-27 16:28:44] 2025-05-27 20:28:24,072 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 16:28:44] 2025-05-27 20:28:24,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 16:28:44] 2025-05-27 20:28:24,148 | INFO     | did not find any defunct processes belonging to 119744
[2025-05-27 16:28:44] 2025-05-27 20:28:24,206 | INFO     | did not find any defunct processes belonging to 119744
[2025-05-27 16:28:44] 2025-05-27 20:28:24,207 | INFO     | ready for new job
[2025-05-27 16:28:44] 2025-05-27 20:28:24,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 16:28:44] 2025-05-27 20:28:24,209 | INFO     | **************************************
[2025-05-27 16:28:44] 2025-05-27 20:28:24,209 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 16:28:44] 2025-05-27 20:28:24,209 | INFO     | **************************************
[2025-05-27 16:28:44] 2025-05-27 20:28:24,209 | INFO     | 
[2025-05-27 16:28:44] 2025-05-27 20:28:24,235 | INFO     | architecture information:
[2025-05-27 16:28:44] 2025-05-27 20:28:24,239 | INFO     | executing command: cat /etc/os-release
[2025-05-27 16:28:44] 2025-05-27 20:28:24,308 | INFO     | cat /etc/os-release:
[2025-05-27 16:28:44] NAME="CentOS Linux"
[2025-05-27 16:28:44] VERSION="7 (Core)"
[2025-05-27 16:28:44] ID="centos"
[2025-05-27 16:28:44] ID_LIKE="rhel fedora"
[2025-05-27 16:28:44] VERSION_ID="7"
[2025-05-27 16:28:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 16:28:44] ANSI_COLOR="0;31"
[2025-05-27 16:28:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 16:28:44] HOME_URL="https://www.centos.org/"
[2025-05-27 16:28:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 16:28:44] 
[2025-05-27 16:28:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 16:28:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 16:28:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 16:28:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 16:28:44] 
[2025-05-27 16:28:44] 2025-05-27 20:28:24,308 | INFO     | **************************************
[2025-05-27 16:28:44] 2025-05-27 20:28:24,812 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-27 16:28:44] 2025-05-27 20:28:24,881 | INFO     | sufficient remaining disk space (73757884416 B)
[2025-05-27 16:28:44] 2025-05-27 20:28:24,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 16:28:44] 2025-05-27 20:28:24,881 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 16:28:44] 2025-05-27 20:28:24,881 | INFO     | update_server=False
[2025-05-27 16:28:44] 2025-05-27 20:28:24,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 16:28:44] 2025-05-27 20:28:24,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 16:28:44] 2025-05-27 20:28:24,895 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 16:28:44] 2025-05-27 20:28:25,006 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 16:28:44] 2025-05-27 20:28:25,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 16:28:44] 2025-05-27 20:28:25,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 16:28:44] 2025-05-27 20:28:25,304 | INFO     | all data control threads have been joined
[2025-05-27 16:28:44] 2025-05-27 20:28:25,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 16:28:44] 2025-05-27 20:28:25,457 | INFO     | aborting loop
[2025-05-27 16:28:44] 2025-05-27 20:28:25,711 | INFO     | all payload control threads have been joined
[2025-05-27 16:28:44] 2025-05-27 20:28:25,858 | INFO     | all job control threads have been joined
[2025-05-27 16:28:44] 2025-05-27 20:28:25,887 | INFO     | [job] retrieve thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:25,953 | INFO     | [job] validate thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:26,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 16:28:44] 2025-05-27 20:28:26,260 | INFO     | [payload] validate_post thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:26,310 | INFO     | [data] control thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:26,400 | INFO     | [data] copytool_in thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:26,401 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:26,455 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:26,477 | INFO     | [job] job monitor thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:26,717 | INFO     | [payload] control thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:26,864 | INFO     | [job] control thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:26,902 | INFO     | [data] copytool_out thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:27,013 | INFO     | [job] queue monitor thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:27,083 | INFO     | [payload] failed_post thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:27,199 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:28,898 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:35,857 | INFO     | job.realtimelogging is not enabled
[2025-05-27 16:28:44] 2025-05-27 20:28:36,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 16:28:44] 2025-05-27 20:28:37,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336355948352)>', '<ExcThread(monitor, started 140335992772352)>']
[2025-05-27 16:28:44] 2025-05-27 20:28:38,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 16:28:44] 2025-05-27 20:28:38,086 | INFO     | [monitor] control thread has ended
[2025-05-27 16:28:44] 2025-05-27 20:28:42,866 | INFO     | all workflow threads have been joined
[2025-05-27 16:28:44] 2025-05-27 20:28:42,866 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 16:28:44] 2025-05-27 20:28:42,867 | INFO     | traces error code: 0
[2025-05-27 16:28:44] 2025-05-27 20:28:42,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 16:28:44] 2025-05-27 20:28:43,845 [wrapper] ==== pilot stdout END ====
[2025-05-27 16:28:44] 2025-05-27 20:28:43,866 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 16:28:44] 2025-05-27 20:28:43,889 [wrapper] pilotpid: 96198
[2025-05-27 16:28:44] 2025-05-27 20:28:43,909 [wrapper] Pilot exit status: 0
[2025-05-27 16:28:44] 2025-05-27 20:28:44,043 [wrapper] pandaids: 6666850745
[2025-05-27 16:28:44] 2025-05-27 20:28:44,176 [wrapper] cleanup supervisor_pilot 1764698 96199
[2025-05-27 16:28:44] 2025-05-27 20:28:44,200 [wrapper] Test setup, not cleaning
[2025-05-27 16:28:44] 2025-05-27 20:28:44,211 [wrapper] apfmon messages muted
[2025-05-27 16:28:44] 2025-05-27 20:28:44,225 [wrapper] ==== wrapper stdout END ====
[2025-05-27 16:28:44] 2025-05-27 20:28:44,275 [wrapper] ==== wrapper stderr END ====
[2025-05-27 16:28:44]  *** Error codes and diagnostics ***
[2025-05-27 16:28:44]     "exeErrorCode": 0,
[2025-05-27 16:28:44]     "exeErrorDiag": "",
[2025-05-27 16:28:44]     "pilotErrorCode": 0,
[2025-05-27 16:28:44]     "pilotErrorDiag": "",
[2025-05-27 16:28:44]  *** Listing of results directory ***
[2025-05-27 16:28:44] total 419904
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas      5111 May 27 04:53 queuedata.json
[2025-05-27 16:28:44] -rwx------. 1 boincer umatlas     37140 May 27 04:55 runpilot2-wrapper.sh
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas       100 May 27 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 16:28:44] -rwxr-xr-x. 1 boincer umatlas      7986 May 27 10:54 run_atlas
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas       105 May 27 10:54 job.xml
[2025-05-27 16:28:44] -rw-r--r--. 2 boincer umatlas 226150279 May 27 10:54 EVNT.44871834._002555.pool.root.1
[2025-05-27 16:28:44] -rw-r--r--. 2 boincer umatlas     15093 May 27 10:54 start_atlas.sh
[2025-05-27 16:28:44] drwxrwx--x. 2 boincer umatlas      4096 May 27 10:54 shared
[2025-05-27 16:28:44] -rw-r--r--. 2 boincer umatlas    508879 May 27 10:54 input.tar.gz
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas         0 May 27 10:54 boinc_lockfile
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas      2559 May 27 10:54 pandaJob.out
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas    990964 May 27 10:55 agis_schedconf.cvmfs.json
[2025-05-27 16:28:44] drwx------. 4 boincer umatlas      4096 May 27 10:55 pilot3
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas 195990610 May 27 16:26 HITS.44871837._064825.pool.root.1
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas       531 May 27 16:26 boinc_task_state.xml
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas      1046 May 27 16:27 memory_monitor_summary.json
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas   1603667 May 27 16:27 agis_ddmendpoints.agis.ALL.json
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas    429951 May 27 16:27 log.44871837._064825.job.log.tgz.1
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas        95 May 27 16:27 pilot_heartbeat.json
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas      6854 May 27 16:28 init_data.xml
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas      8192 May 27 16:28 boinc_mmap_file
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas        28 May 27 16:28 wrapper_checkpoint.txt
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas      7736 May 27 16:28 heartbeat.json
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas      4425 May 27 16:28 pilotlog.txt
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas   1572246 May 27 16:28 log.44871837._064825.job.log.1
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas       357 May 27 16:28 output.list
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas       620 May 27 16:28 runtime_log
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas   2017280 May 27 16:28 result.tar.gz
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas      8665 May 27 16:28 runtime_log.err
[2025-05-27 16:28:44] -rw-------. 1 boincer umatlas       656 May 27 16:28 HE3LDmkG5d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcyYKDmVU5YLm.diag
[2025-05-27 16:28:44] -rw-r--r--. 1 boincer umatlas     20907 May 27 16:28 stderr.txt
[2025-05-27 16:28:45] HITS file was successfully produced:
[2025-05-27 16:28:45] -rw-------. 1 boincer umatlas 195990610 May 27 16:26 shared/HITS.pool.root.1
[2025-05-27 16:28:45]  *** Contents of shared directory: ***
[2025-05-27 16:28:45] total 414748
[2025-05-27 16:28:45] -rw-r--r--. 2 boincer umatlas 226150279 May 27 10:54 ATLAS.root_0
[2025-05-27 16:28:45] -rw-r--r--. 2 boincer umatlas     15093 May 27 10:54 start_atlas.sh
[2025-05-27 16:28:45] -rw-r--r--. 2 boincer umatlas    508879 May 27 10:54 input.tar.gz
[2025-05-27 16:28:45] -rw-------. 1 boincer umatlas 195990610 May 27 16:26 HITS.pool.root.1
[2025-05-27 16:28:45] -rw-------. 1 boincer umatlas   2017280 May 27 16:28 result.tar.gz
16:28:46 (85461): run_atlas exited; CPU time 56598.854491
16:28:46 (85461): called boinc_finish(0)

</stderr_txt>
]]>

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