Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:39:25 (1504711): wrapper (7.7.26015): starting
15:39:25 (1504711): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 15:39:25] Arguments: --nthreads 4
[2025-06-06 15:39:25] Threads: 4
[2025-06-06 15:39:25] Checking for CVMFS
[2025-06-06 15:39:25] No cvmfs_config command found, will try listing directly
[2025-06-06 15:39:25] CVMFS is ok
[2025-06-06 15:39:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 15:39:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 15:39:25] Further information can be found at the LHC@home message board.
[2025-06-06 15:39:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 15:39:25] Checking for apptainer binary...
[2025-06-06 15:39:25] which: no apptainer in ((null))
[2025-06-06 15:39:25] apptainer is not installed, using version from CVMFS
[2025-06-06 15:39:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 15:39:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 15:39:25] apptainer works
[2025-06-06 15:39:25] Set ATHENA_PROC_NUMBER=4
[2025-06-06 15:39:25] Set ATHENA_CORE_NUMBER=4
[2025-06-06 15:39:25] Starting ATLAS job with PandaID=6666850413
[2025-06-06 15:39:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 18:08:35]  *** The last 200 lines of the pilot log: ***
[2025-06-06 18:08:35] 2025-06-06 16:08:11,679 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 18:08:35] 2025-06-06 16:08:12,592 | INFO     | monitor loop #661: job 0:6666850413 is in state 'finished'
[2025-06-06 18:08:35] 2025-06-06 16:08:12,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 18:08:35] 2025-06-06 16:08:15,095 | INFO     | monitor loop #662: job 0:6666850413 is in state 'finished'
[2025-06-06 18:08:35] 2025-06-06 16:08:15,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 18:08:35] 2025-06-06 16:08:16,254 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 18:08:35] 2025-06-06 16:08:16,254 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6666850413/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 18:08:35] 2025-06-06 16:08:16,254 | INFO     | extracted standard info from prmon json
[2025-06-06 18:08:35] 2025-06-06 16:08:16,254 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 18:08:35] 2025-06-06 16:08:16,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 18:08:35] 2025-06-06 16:08:16,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 18:08:35] 2025-06-06 16:08:16,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 18:08:35] 2025-06-06 16:08:16,256 | INFO     | fitting pss+swap vs Time
[2025-06-06 18:08:35] 2025-06-06 16:08:16,257 | INFO     | sum of square deviations: 964976232.5
[2025-06-06 18:08:35] 2025-06-06 16:08:16,257 | INFO     | sum of deviations: 12778586799.5
[2025-06-06 18:08:35] 2025-06-06 16:08:16,257 | INFO     | mean x: 1749221620.5
[2025-06-06 18:08:35] 2025-06-06 16:08:16,257 | INFO     | mean y: 2322544.404109589
[2025-06-06 18:08:35] 2025-06-06 16:08:16,257 | INFO     | -- intersect: -23161543627.93843
[2025-06-06 18:08:35] 2025-06-06 16:08:16,257 | INFO     | intersect: -23161543627.93843
[2025-06-06 18:08:35] 2025-06-06 16:08:16,257 | INFO     | chi2: 1.3354127127079387
[2025-06-06 18:08:35] 2025-06-06 16:08:16,258 | INFO     | sum of square deviations: 869188390.0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,258 | INFO     | sum of deviations: 12169557401.0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,258 | INFO     | mean x: 1749221468.0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,258 | INFO     | mean y: 2321574.3971631206
[2025-06-06 18:08:35] 2025-06-06 16:08:16,258 | INFO     | -- intersect: -24488630337.5209
[2025-06-06 18:08:35] 2025-06-06 16:08:16,258 | INFO     | intersect: -24488630337.5209
[2025-06-06 18:08:35] 2025-06-06 16:08:16,258 | INFO     | chi2: 1.3369191702047944
[2025-06-06 18:08:35] 2025-06-06 16:08:16,258 | INFO     | current chi2=1.3369191702047944 (change=-0.1128083836944279 %)
[2025-06-06 18:08:35] 2025-06-06 16:08:16,258 | INFO     | right removable region: 140
[2025-06-06 18:08:35] 2025-06-06 16:08:16,259 | INFO     | sum of square deviations: 869188390.0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,259 | INFO     | sum of deviations: -4106959443.9999986
[2025-06-06 18:08:35] 2025-06-06 16:08:16,259 | INFO     | mean x: 1749221773.0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,259 | INFO     | mean y: 2348867.5177304964
[2025-06-06 18:08:35] 2025-06-06 16:08:16,259 | INFO     | -- intersect: 8267510900.196023
[2025-06-06 18:08:35] 2025-06-06 16:08:16,259 | INFO     | intersect: 8267510900.196023
[2025-06-06 18:08:35] 2025-06-06 16:08:16,259 | INFO     | chi2: 0.03233199090132088
[2025-06-06 18:08:35] 2025-06-06 16:08:16,259 | INFO     | current chi2=0.03233199090132088 (change=97.57887650809027 %)
[2025-06-06 18:08:35] 2025-06-06 16:08:16,259 | INFO     | sum of square deviations: 779958810.0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,260 | INFO     | sum of deviations: -2207873558.5
[2025-06-06 18:08:35] 2025-06-06 16:08:16,260 | INFO     | mean x: 1749221925.5
[2025-06-06 18:08:35] 2025-06-06 16:08:16,260 | INFO     | mean y: 2345608.1397058824
[2025-06-06 18:08:35] 2025-06-06 16:08:16,260 | INFO     | -- intersect: 4953967139.615075
[2025-06-06 18:08:35] 2025-06-06 16:08:16,260 | INFO     | intersect: 4953967139.615075
[2025-06-06 18:08:35] 2025-06-06 16:08:16,260 | INFO     | chi2: 0.027290991419789534
[2025-06-06 18:08:35] 2025-06-06 16:08:16,260 | INFO     | current chi2=0.027290991419789534 (change=15.591367376406753 %)
[2025-06-06 18:08:35] 2025-06-06 16:08:16,260 | INFO     | left removable region: 20
[2025-06-06 18:08:35] 2025-06-06 16:08:16,260 | INFO     | sum of square deviations: 535786790.0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | sum of deviations: 2283785801.5
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | mean x: 1749222047.5
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | mean y: 2335726.1083333334
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | -- intersect: -7453705651.379266
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | intersect: -7453705651.379266
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | chi2: 0.0002257193569131697
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | -- intersect: -7453705651.379266
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | current memory leak: 4.26 B/s (using 120 data points, chi2=0.00)
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | ..............................
[2025-06-06 18:08:35] 2025-06-06 16:08:16,261 | INFO     | . Timing measurements:
[2025-06-06 18:08:35] 2025-06-06 16:08:16,262 | INFO     | . get job = 0 s
[2025-06-06 18:08:35] 2025-06-06 16:08:16,262 | INFO     | . initial setup = 1 s
[2025-06-06 18:08:35] 2025-06-06 16:08:16,262 | INFO     | . payload setup = 6 s
[2025-06-06 18:08:35] 2025-06-06 16:08:16,262 | INFO     | . stage-in = 0 s
[2025-06-06 18:08:35] 2025-06-06 16:08:16,262 | INFO     | . payload execution = 8893 s
[2025-06-06 18:08:35] 2025-06-06 16:08:16,262 | INFO     | . stage-out = 0 s
[2025-06-06 18:08:35] 2025-06-06 16:08:16,262 | INFO     | . log creation = 0 s
[2025-06-06 18:08:35] 2025-06-06 16:08:16,262 | INFO     | ..............................
[2025-06-06 18:08:35] 2025-06-06 16:08:16,328 | INFO     | 
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | job summary report
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | --------------------------------------------------
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | PanDA job id: 6666850413
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | task id: 44871837
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | errors: (none)
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | pilot state: finished 
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | transexitcode: 0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | exeerrorcode: 0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | exeerrordiag: 
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | exitcode: 0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | exitmsg: OK
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | cpuconsumptiontime: 34540 s
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | nevents: 400
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | neventsw: 0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | pid: 1515603
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | pgrp: 1515603
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | corecount: 4
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | event service: False
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | sizes: {0: 2397289, 1: 2397431, 4: 2397637, 11: 2397665, 8903: 2425826, 8904: 2434973, 8908: 2435087}
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | --------------------------------------------------
[2025-06-06 18:08:35] 2025-06-06 16:08:16,329 | INFO     | 
[2025-06-06 18:08:35] 2025-06-06 16:08:16,330 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | job 6666850413 has completed (purged errors)
[2025-06-06 18:08:35] 2025-06-06 16:08:16,344 | INFO     | overall cleanup function is called
[2025-06-06 18:08:35] 2025-06-06 16:08:16,841 | INFO     | 8925s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 18:08:35] 2025-06-06 16:08:17,350 | INFO     | --- collectZombieJob: --- 10, [1515603]
[2025-06-06 18:08:35] 2025-06-06 16:08:17,350 | INFO     | zombie collector waiting for pid 1515603
[2025-06-06 18:08:35] 2025-06-06 16:08:17,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 18:08:35] 2025-06-06 16:08:17,350 | INFO     | collected zombie processes
[2025-06-06 18:08:35] 2025-06-06 16:08:17,350 | INFO     | will attempt to kill all subprocesses of pid=1515603
[2025-06-06 18:08:35] 2025-06-06 16:08:17,508 | INFO     | process IDs to be killed: [1515603] (in reverse order)
[2025-06-06 18:08:35] 2025-06-06 16:08:17,569 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 18:08:35] 2025-06-06 16:08:17,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 18:08:35] 2025-06-06 16:08:17,575 | INFO     | did not find any defunct processes belonging to 1515603
[2025-06-06 18:08:35] 2025-06-06 16:08:17,580 | INFO     | did not find any defunct processes belonging to 1515603
[2025-06-06 18:08:35] 2025-06-06 16:08:17,581 | INFO     | ready for new job
[2025-06-06 18:08:35] 2025-06-06 16:08:17,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 18:08:35] 2025-06-06 16:08:17,582 | INFO     | **************************************
[2025-06-06 18:08:35] 2025-06-06 16:08:17,582 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 18:08:35] 2025-06-06 16:08:17,582 | INFO     | **************************************
[2025-06-06 18:08:35] 2025-06-06 16:08:17,582 | INFO     | 
[2025-06-06 18:08:35] 2025-06-06 16:08:17,585 | INFO     | architecture information:
[2025-06-06 18:08:35] 2025-06-06 16:08:17,585 | INFO     | executing command: cat /etc/os-release
[2025-06-06 18:08:35] 2025-06-06 16:08:17,595 | INFO     | cat /etc/os-release:
[2025-06-06 18:08:35] NAME="CentOS Linux"
[2025-06-06 18:08:35] VERSION="7 (Core)"
[2025-06-06 18:08:35] ID="centos"
[2025-06-06 18:08:35] ID_LIKE="rhel fedora"
[2025-06-06 18:08:35] VERSION_ID="7"
[2025-06-06 18:08:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 18:08:35] ANSI_COLOR="0;31"
[2025-06-06 18:08:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 18:08:35] HOME_URL="https://www.centos.org/"
[2025-06-06 18:08:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 18:08:35] 
[2025-06-06 18:08:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 18:08:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 18:08:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 18:08:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 18:08:35] 
[2025-06-06 18:08:35] 2025-06-06 16:08:17,596 | INFO     | **************************************
[2025-06-06 18:08:35] 2025-06-06 16:08:18,099 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-06 18:08:35] 2025-06-06 16:08:18,109 | INFO     | sufficient remaining disk space (702800723968 B)
[2025-06-06 18:08:35] 2025-06-06 16:08:18,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 18:08:35] 2025-06-06 16:08:18,110 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 18:08:35] 2025-06-06 16:08:18,110 | INFO     | update_server=False
[2025-06-06 18:08:35] 2025-06-06 16:08:18,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 18:08:35] 2025-06-06 16:08:18,110 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 18:08:35] 2025-06-06 16:08:18,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 18:08:35] 2025-06-06 16:08:18,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:08:35] 2025-06-06 16:08:18,111 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 18:08:35] 2025-06-06 16:08:18,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 18:08:35] 2025-06-06 16:08:18,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 18:08:35] 2025-06-06 16:08:18,279 | INFO     | all payload control threads have been joined
[2025-06-06 18:08:35] 2025-06-06 16:08:18,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:08:35] 2025-06-06 16:08:18,603 | INFO     | aborting loop
[2025-06-06 18:08:35] 2025-06-06 16:08:19,027 | INFO     | all job control threads have been joined
[2025-06-06 18:08:35] 2025-06-06 16:08:19,106 | INFO     | all data control threads have been joined
[2025-06-06 18:08:35] 2025-06-06 16:08:19,115 | INFO     | [job] retrieve thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:19,116 | INFO     | [job] queue monitor thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:19,192 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:19,284 | INFO     | [payload] control thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:19,285 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:19,552 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 18:08:35] 2025-06-06 16:08:19,609 | INFO     | [job] job monitor thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:19,838 | INFO     | [payload] validate_post thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:19,943 | INFO     | [data] copytool_in thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:20,032 | INFO     | [job] control thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:20,112 | INFO     | [data] control thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:20,170 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:20,376 | INFO     | [job] validate thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:20,652 | INFO     | [payload] failed_post thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:21,557 | INFO     | [data] copytool_out thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:22,117 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:28,983 | INFO     | job.realtimelogging is not enabled
[2025-06-06 18:08:35] 2025-06-06 16:08:29,988 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 18:08:35] 2025-06-06 16:08:30,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22879775737664)>', '<ExcThread(monitor, started 22879531915008)>']
[2025-06-06 18:08:35] 2025-06-06 16:08:31,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 18:08:35] 2025-06-06 16:08:31,177 | INFO     | [monitor] control thread has ended
[2025-06-06 18:08:35] 2025-06-06 16:08:35,407 | INFO     | all workflow threads have been joined
[2025-06-06 18:08:35] 2025-06-06 16:08:35,408 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 18:08:35] 2025-06-06 16:08:35,408 | INFO     | traces error code: 0
[2025-06-06 18:08:35] 2025-06-06 16:08:35,408 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 18:08:35] 2025-06-06 16:08:35,550 [wrapper] ==== pilot stdout END ====
[2025-06-06 18:08:35] 2025-06-06 16:08:35,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 18:08:35] 2025-06-06 16:08:35,554 [wrapper] pilotpid: 1508458
[2025-06-06 18:08:35] 2025-06-06 16:08:35,556 [wrapper] Pilot exit status: 0
[2025-06-06 18:08:35] 2025-06-06 16:08:35,563 [wrapper] pandaids: 6666850413
[2025-06-06 18:08:35] 2025-06-06 16:08:35,600 [wrapper] cleanup supervisor_pilot 1735079 1508459
[2025-06-06 18:08:35] 2025-06-06 16:08:35,602 [wrapper] Test setup, not cleaning
[2025-06-06 18:08:35] 2025-06-06 16:08:35,604 [wrapper] apfmon messages muted
[2025-06-06 18:08:35] 2025-06-06 16:08:35,606 [wrapper] ==== wrapper stdout END ====
[2025-06-06 18:08:35] 2025-06-06 16:08:35,608 [wrapper] ==== wrapper stderr END ====
[2025-06-06 18:08:35]  *** Error codes and diagnostics ***
[2025-06-06 18:08:35]     "exeErrorCode": 0,
[2025-06-06 18:08:35]     "exeErrorDiag": "",
[2025-06-06 18:08:35]     "pilotErrorCode": 0,
[2025-06-06 18:08:35]     "pilotErrorDiag": "",
[2025-06-06 18:08:35]  *** Listing of results directory ***
[2025-06-06 18:08:35] total 576652
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc      5111 May 27 10:13 queuedata.json
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc    495897 May 27 10:13 pilot3.tar.gz
[2025-06-06 18:08:35] -rwx------ 1 boinc boinc     37140 May 27 10:16 runpilot2-wrapper.sh
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc       100 Jun  2 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 18:08:35] -rwxr-xr-x 1 boinc boinc      7986 Jun  2 10:20 run_atlas
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc       105 Jun  2 10:20 job.xml
[2025-06-06 18:08:35] -rw------- 2 boinc boinc 147193856 Jun  2 10:41 copy_I9MwfD
[2025-06-06 18:08:35] -rw------- 2 boinc boinc  18219008 Jun  4 22:57 copy_ErWQLU
[2025-06-06 18:08:35] -rw-r--r-- 2 boinc boinc 224190271 Jun  6 15:39 EVNT.44871834._002543.pool.root.1
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc      6635 Jun  6 15:39 init_data.xml
[2025-06-06 18:08:35] -rw-r--r-- 2 boinc boinc     15093 Jun  6 15:39 start_atlas.sh
[2025-06-06 18:08:35] drwxrwx--x 2 boinc boinc      4096 Jun  6 15:39 shared
[2025-06-06 18:08:35] -rw-r--r-- 2 boinc boinc    508881 Jun  6 15:39 input.tar.gz
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc         0 Jun  6 15:39 boinc_lockfile
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc      2559 Jun  6 15:39 pandaJob.out
[2025-06-06 18:08:35] -rw------- 1 boinc boinc    985728 Jun  6 15:39 agis_schedconf.cvmfs.json
[2025-06-06 18:08:35] -rw------- 1 boinc boinc   1598969 Jun  6 15:39 agis_ddmendpoints.agis.ALL.json
[2025-06-06 18:08:35] drwx------ 4 boinc boinc      4096 Jun  6 15:39 pilot3
[2025-06-06 18:08:35] -rw------- 1 boinc boinc 194750033 Jun  6 18:07 HITS.44871837._064542.pool.root.1
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc       529 Jun  6 18:07 boinc_task_state.xml
[2025-06-06 18:08:35] -rw------- 1 boinc boinc      1033 Jun  6 18:08 memory_monitor_summary.json
[2025-06-06 18:08:35] -rw------- 1 boinc boinc    299196 Jun  6 18:08 log.44871837._064542.job.log.tgz.1
[2025-06-06 18:08:35] -rw------- 1 boinc boinc        95 Jun  6 18:08 pilot_heartbeat.json
[2025-06-06 18:08:35] -rw------- 1 boinc boinc      7721 Jun  6 18:08 heartbeat.json
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc      8192 Jun  6 18:08 boinc_mmap_file
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc        27 Jun  6 18:08 wrapper_checkpoint.txt
[2025-06-06 18:08:35] -rw------- 1 boinc boinc      4558 Jun  6 18:08 pilotlog.txt
[2025-06-06 18:08:35] -rw------- 1 boinc boinc    849564 Jun  6 18:08 log.44871837._064542.job.log.1
[2025-06-06 18:08:35] -rw------- 1 boinc boinc       357 Jun  6 18:08 output.list
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc       620 Jun  6 18:08 runtime_log
[2025-06-06 18:08:35] -rw------- 1 boinc boinc   1167360 Jun  6 18:08 result.tar.gz
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc      9025 Jun  6 18:08 runtime_log.err
[2025-06-06 18:08:35] -rw------- 1 boinc boinc       661 Jun  6 18:08 X6jMDmme4d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmHZRKDmwvy0Im.diag
[2025-06-06 18:08:35] -rw-r--r-- 1 boinc boinc     20946 Jun  6 18:08 stderr.txt
[2025-06-06 18:08:35] HITS file was successfully produced:
[2025-06-06 18:08:35] -rw------- 1 boinc boinc 194750033 Jun  6 18:07 shared/HITS.pool.root.1
[2025-06-06 18:08:35]  *** Contents of shared directory: ***
[2025-06-06 18:08:35] total 572332
[2025-06-06 18:08:35] -rw------- 2 boinc boinc 147193856 Jun  2 10:41 copy_I9MwfD
[2025-06-06 18:08:35] -rw------- 2 boinc boinc  18219008 Jun  4 22:57 copy_ErWQLU
[2025-06-06 18:08:35] -rw-r--r-- 2 boinc boinc 224190271 Jun  6 15:39 ATLAS.root_0
[2025-06-06 18:08:35] -rw-r--r-- 2 boinc boinc     15093 Jun  6 15:39 start_atlas.sh
[2025-06-06 18:08:35] -rw-r--r-- 2 boinc boinc    508881 Jun  6 15:39 input.tar.gz
[2025-06-06 18:08:35] -rw------- 1 boinc boinc 194750033 Jun  6 18:07 HITS.pool.root.1
[2025-06-06 18:08:35] -rw------- 1 boinc boinc   1167360 Jun  6 18:08 result.tar.gz
18:08:36 (1504711): run_atlas exited; CPU time 34821.681312
18:08:36 (1504711): called boinc_finish(0)

</stderr_txt>
]]>

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