Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:36:49 (1554607): wrapper (7.7.26015): starting
07:36:49 (1554607): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 07:36:49] Arguments: --nthreads 4
[2025-06-03 07:36:49] Threads: 4
[2025-06-03 07:36:49] Checking for CVMFS
[2025-06-03 07:36:49] No cvmfs_config command found, will try listing directly
[2025-06-03 07:36:49] CVMFS is ok
[2025-06-03 07:36:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 07:36:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 07:36:49] Further information can be found at the LHC@home message board.
[2025-06-03 07:36:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:36:49] Checking for apptainer binary...
[2025-06-03 07:36:49] which: no apptainer in ((null))
[2025-06-03 07:36:49] apptainer is not installed, using version from CVMFS
[2025-06-03 07:36:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:36:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-03 07:36:49] apptainer works
[2025-06-03 07:36:49] Set ATHENA_PROC_NUMBER=4
[2025-06-03 07:36:49] Set ATHENA_CORE_NUMBER=4
[2025-06-03 07:36:49] Starting ATLAS job with PandaID=6666594359
[2025-06-03 07:36:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:10:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:10:16] 2025-06-03 10:08:39,278 | INFO     | total number of processed events: 400 (read)
[2025-06-03 12:10:16] 2025-06-03 10:08:39,281 | INFO     | executing command: lscpu
[2025-06-03 12:10:16] 2025-06-03 10:08:39,323 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 12:10:16] 2025-06-03 10:08:40,780 | INFO     | monitor loop #1186: job 0:6666594359 is in state 'finished'
[2025-06-03 12:10:16] 2025-06-03 10:08:40,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:10:16] 2025-06-03 10:08:43,296 | INFO     | monitor loop #1187: job 0:6666594359 is in state 'finished'
[2025-06-03 12:10:16] 2025-06-03 10:08:43,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:10:16] 2025-06-03 10:08:44,960 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 12:10:16] 2025-06-03 10:08:44,961 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6666594359/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:10:16] 2025-06-03 10:08:44,962 | INFO     | extracted standard info from prmon json
[2025-06-03 12:10:16] 2025-06-03 10:08:44,962 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:10:16] 2025-06-03 10:08:44,962 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:10:16] 2025-06-03 10:08:44,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:10:16] 2025-06-03 10:08:44,963 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:10:16] 2025-06-03 10:08:44,968 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:10:16] 2025-06-03 10:08:44,969 | INFO     | sum of square deviations: 5902093918.0
[2025-06-03 12:10:16] 2025-06-03 10:08:44,971 | INFO     | sum of deviations: -7712126360.999995
[2025-06-03 12:10:16] 2025-06-03 10:08:44,971 | INFO     | mean x: 1748937158.0
[2025-06-03 12:10:16] 2025-06-03 10:08:44,971 | INFO     | mean y: 2355680.202247191
[2025-06-03 12:10:16] 2025-06-03 10:08:44,971 | INFO     | -- intersect: 2287650449.709203
[2025-06-03 12:10:16] 2025-06-03 10:08:44,971 | INFO     | intersect: 2287650449.709203
[2025-06-03 12:10:16] 2025-06-03 10:08:44,972 | INFO     | chi2: 1.6155040370413247
[2025-06-03 12:10:16] 2025-06-03 10:08:44,972 | INFO     | sum of square deviations: 5576683165.5
[2025-06-03 12:10:16] 2025-06-03 10:08:44,975 | INFO     | sum of deviations: -7532683454.000009
[2025-06-03 12:10:16] 2025-06-03 10:08:44,975 | INFO     | mean x: 1748937005.5
[2025-06-03 12:10:16] 2025-06-03 10:08:44,975 | INFO     | mean y: 2355764.3053435115
[2025-06-03 12:10:16] 2025-06-03 10:08:44,975 | INFO     | -- intersect: 2364725734.4911942
[2025-06-03 12:10:16] 2025-06-03 10:08:44,975 | INFO     | intersect: 2364725734.4911942
[2025-06-03 12:10:16] 2025-06-03 10:08:44,976 | INFO     | chi2: 1.6151613140729355
[2025-06-03 12:10:16] 2025-06-03 10:08:44,976 | INFO     | current chi2=1.6151613140729355 (change=0.02121461540986869 %)
[2025-06-03 12:10:16] 2025-06-03 10:08:44,976 | INFO     | right removable region: 261
[2025-06-03 12:10:16] 2025-06-03 10:08:44,976 | INFO     | sum of square deviations: 5576683165.5
[2025-06-03 12:10:16] 2025-06-03 10:08:44,979 | INFO     | sum of deviations: -46159667277.0
[2025-06-03 12:10:16] 2025-06-03 10:08:44,980 | INFO     | mean x: 1748937310.5
[2025-06-03 12:10:16] 2025-06-03 10:08:44,980 | INFO     | mean y: 2373540.580152672
[2025-06-03 12:10:16] 2025-06-03 10:08:44,980 | INFO     | -- intersect: 14478785763.610405
[2025-06-03 12:10:16] 2025-06-03 10:08:44,980 | INFO     | intersect: 14478785763.610405
[2025-06-03 12:10:16] 2025-06-03 10:08:44,981 | INFO     | chi2: 0.14520162299835362
[2025-06-03 12:10:16] 2025-06-03 10:08:44,981 | INFO     | current chi2=0.14520162299835362 (change=91.01199256274967 %)
[2025-06-03 12:10:16] 2025-06-03 10:08:44,981 | INFO     | sum of square deviations: 5263458688.0
[2025-06-03 12:10:16] 2025-06-03 10:08:44,983 | INFO     | sum of deviations: -39419801188.99999
[2025-06-03 12:10:16] 2025-06-03 10:08:44,984 | INFO     | mean x: 1748937463.0
[2025-06-03 12:10:16] 2025-06-03 10:08:44,984 | INFO     | mean y: 2370264.1206225683
[2025-06-03 12:10:16] 2025-06-03 10:08:44,984 | INFO     | -- intersect: 13100747428.291124
[2025-06-03 12:10:16] 2025-06-03 10:08:44,984 | INFO     | intersect: 13100747428.291124
[2025-06-03 12:10:16] 2025-06-03 10:08:44,984 | INFO     | chi2: 0.13514170216820304
[2025-06-03 12:10:16] 2025-06-03 10:08:44,984 | INFO     | current chi2=0.13514170216820304 (change=6.928242689315292 %)
[2025-06-03 12:10:16] 2025-06-03 10:08:44,985 | INFO     | left removable region: 20
[2025-06-03 12:10:16] 2025-06-03 10:08:44,985 | INFO     | sum of square deviations: 4340323240.0
[2025-06-03 12:10:16] 2025-06-03 10:08:44,987 | INFO     | sum of deviations: -27276769028.000004
[2025-06-03 12:10:16] 2025-06-03 10:08:44,987 | INFO     | mean x: 1748937585.0
[2025-06-03 12:10:16] 2025-06-03 10:08:44,987 | INFO     | mean y: 2364616.385892116
[2025-06-03 12:10:16] 2025-06-03 10:08:44,987 | INFO     | -- intersect: 10993565942.311361
[2025-06-03 12:10:16] 2025-06-03 10:08:44,987 | INFO     | intersect: 10993565942.311361
[2025-06-03 12:10:16] 2025-06-03 10:08:44,988 | INFO     | chi2: 0.11801942424494063
[2025-06-03 12:10:16] 2025-06-03 10:08:44,988 | INFO     | -- intersect: 10993565942.311361
[2025-06-03 12:10:16] 2025-06-03 10:08:44,988 | INFO     | current memory leak: -6.28 B/s (using 241 data points, chi2=0.12)
[2025-06-03 12:10:16] 2025-06-03 10:08:44,989 | INFO     | ..............................
[2025-06-03 12:10:16] 2025-06-03 10:08:44,989 | INFO     | . Timing measurements:
[2025-06-03 12:10:16] 2025-06-03 10:08:44,989 | INFO     | . get job = 0 s
[2025-06-03 12:10:16] 2025-06-03 10:08:44,989 | INFO     | . initial setup = 1 s
[2025-06-03 12:10:16] 2025-06-03 10:08:44,989 | INFO     | . payload setup = 6 s
[2025-06-03 12:10:16] 2025-06-03 10:08:44,989 | INFO     | . stage-in = 0 s
[2025-06-03 12:10:16] 2025-06-03 10:08:44,989 | INFO     | . payload execution = 16268 s
[2025-06-03 12:10:16] 2025-06-03 10:08:44,990 | INFO     | . stage-out = 1 s
[2025-06-03 12:10:16] 2025-06-03 10:08:44,990 | INFO     | . log creation = 0 s
[2025-06-03 12:10:16] 2025-06-03 10:08:44,990 | INFO     | ..............................
[2025-06-03 12:10:16] 2025-06-03 10:08:45,106 | INFO     | 
[2025-06-03 12:10:16] 2025-06-03 10:08:45,106 | INFO     | job summary report
[2025-06-03 12:10:16] 2025-06-03 10:08:45,106 | INFO     | --------------------------------------------------
[2025-06-03 12:10:16] 2025-06-03 10:08:45,106 | INFO     | PanDA job id: 6666594359
[2025-06-03 12:10:16] 2025-06-03 10:08:45,106 | INFO     | task id: 44871837
[2025-06-03 12:10:16] 2025-06-03 10:08:45,107 | INFO     | errors: (none)
[2025-06-03 12:10:16] 2025-06-03 10:08:45,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:10:16] 2025-06-03 10:08:45,107 | INFO     | pilot state: finished 
[2025-06-03 12:10:16] 2025-06-03 10:08:45,107 | INFO     | transexitcode: 0
[2025-06-03 12:10:16] 2025-06-03 10:08:45,107 | INFO     | exeerrorcode: 0
[2025-06-03 12:10:16] 2025-06-03 10:08:45,107 | INFO     | exeerrordiag: 
[2025-06-03 12:10:16] 2025-06-03 10:08:45,107 | INFO     | exitcode: 0
[2025-06-03 12:10:16] 2025-06-03 10:08:45,107 | INFO     | exitmsg: OK
[2025-06-03 12:10:16] 2025-06-03 10:08:45,108 | INFO     | cpuconsumptiontime: 62022 s
[2025-06-03 12:10:16] 2025-06-03 10:08:45,108 | INFO     | nevents: 400
[2025-06-03 12:10:16] 2025-06-03 10:08:45,108 | INFO     | neventsw: 0
[2025-06-03 12:10:16] 2025-06-03 10:08:45,108 | INFO     | pid: 1564998
[2025-06-03 12:10:16] 2025-06-03 10:08:45,108 | INFO     | pgrp: 1564998
[2025-06-03 12:10:16] 2025-06-03 10:08:45,108 | INFO     | corecount: 4
[2025-06-03 12:10:16] 2025-06-03 10:08:45,108 | INFO     | event service: False
[2025-06-03 12:10:16] 2025-06-03 10:08:45,108 | INFO     | sizes: {0: 2405074, 1: 2405273, 5: 2405479, 11: 2405535, 16279: 2436622, 16281: 2445585, 16283: 2445769, 16291: 2445939}
[2025-06-03 12:10:16] 2025-06-03 10:08:45,109 | INFO     | --------------------------------------------------
[2025-06-03 12:10:16] 2025-06-03 10:08:45,109 | INFO     | 
[2025-06-03 12:10:16] 2025-06-03 10:08:45,109 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-03 12:10:16] 2025-06-03 10:08:45,128 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,129 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,129 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,131 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:10:16] 2025-06-03 10:08:45,131 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,131 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:10:16] 2025-06-03 10:08:45,131 | INFO     | job 6666594359 has completed (purged errors)
[2025-06-03 12:10:16] 2025-06-03 10:08:45,131 | INFO     | overall cleanup function is called
[2025-06-03 12:10:16] 2025-06-03 10:08:46,139 | INFO     | --- collectZombieJob: --- 10, [1564998]
[2025-06-03 12:10:16] 2025-06-03 10:08:46,139 | INFO     | zombie collector waiting for pid 1564998
[2025-06-03 12:10:16] 2025-06-03 10:08:46,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:10:16] 2025-06-03 10:08:46,140 | INFO     | collected zombie processes
[2025-06-03 12:10:16] 2025-06-03 10:08:46,140 | INFO     | will attempt to kill all subprocesses of pid=1564998
[2025-06-03 12:10:16] 2025-06-03 10:08:46,465 | INFO     | process IDs to be killed: [1564998] (in reverse order)
[2025-06-03 12:10:16] 2025-06-03 10:08:46,541 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:10:16] 2025-06-03 10:08:46,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:10:16] 2025-06-03 10:08:46,550 | INFO     | did not find any defunct processes belonging to 1564998
[2025-06-03 12:10:16] 2025-06-03 10:08:46,558 | INFO     | did not find any defunct processes belonging to 1564998
[2025-06-03 12:10:16] 2025-06-03 10:08:46,559 | INFO     | ready for new job
[2025-06-03 12:10:16] 2025-06-03 10:08:46,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:10:16] 2025-06-03 10:08:46,561 | INFO     | **************************************
[2025-06-03 12:10:16] 2025-06-03 10:08:46,561 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:10:16] 2025-06-03 10:08:46,561 | INFO     | **************************************
[2025-06-03 12:10:16] 2025-06-03 10:08:46,561 | INFO     | 
[2025-06-03 12:10:16] 2025-06-03 10:08:46,564 | INFO     | architecture information:
[2025-06-03 12:10:16] 2025-06-03 10:08:46,565 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:10:16] 2025-06-03 10:08:46,578 | INFO     | cat /etc/os-release:
[2025-06-03 12:10:16] NAME="CentOS Linux"
[2025-06-03 12:10:16] VERSION="7 (Core)"
[2025-06-03 12:10:16] ID="centos"
[2025-06-03 12:10:16] ID_LIKE="rhel fedora"
[2025-06-03 12:10:16] VERSION_ID="7"
[2025-06-03 12:10:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:10:16] ANSI_COLOR="0;31"
[2025-06-03 12:10:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:10:16] HOME_URL="https://www.centos.org/"
[2025-06-03 12:10:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:10:16] 
[2025-06-03 12:10:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:10:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:10:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:10:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:10:16] 
[2025-06-03 12:10:16] 2025-06-03 10:08:46,579 | INFO     | **************************************
[2025-06-03 12:10:16] 2025-06-03 10:08:47,082 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-03 12:10:16] 2025-06-03 10:08:47,096 | INFO     | sufficient remaining disk space (1652920680448 B)
[2025-06-03 12:10:16] 2025-06-03 10:08:47,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:10:16] 2025-06-03 10:08:47,097 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:10:16] 2025-06-03 10:08:47,097 | INFO     | update_server=False
[2025-06-03 12:10:16] 2025-06-03 10:08:47,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:10:16] 2025-06-03 10:08:47,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:10:16] 2025-06-03 10:08:47,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:10:16] 2025-06-03 10:08:47,098 | INFO     | aborting loop
[2025-06-03 12:10:16] 2025-06-03 10:08:47,158 | INFO     | all data control threads have been joined
[2025-06-03 12:10:16] 2025-06-03 10:08:47,690 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:10:16] 2025-06-03 10:08:47,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:10:16] 2025-06-03 10:08:47,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:10:16] 2025-06-03 10:08:47,713 | INFO     | all payload control threads have been joined
[2025-06-03 12:10:16] 2025-06-03 10:08:47,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:10:16] 2025-06-03 10:08:47,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:10:16] 2025-06-03 10:08:48,102 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,103 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,103 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,106 | INFO     | all job control threads have been joined
[2025-06-03 12:10:16] 2025-06-03 10:08:48,161 | INFO     | [data] control thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,344 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,401 | INFO     | [job] validate thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,455 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,698 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,718 | INFO     | [payload] control thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,809 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,838 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:48,914 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:49,111 | INFO     | [job] control thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:49,824 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:51,930 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:57,574 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:10:16] 2025-06-03 10:08:58,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:10:16] 2025-06-03 10:08:58,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22938120120128)>', '<ExcThread(monitor, started 22937404958464)>']
[2025-06-03 12:10:16] 2025-06-03 10:08:58,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:10:16] 2025-06-03 10:08:58,740 | INFO     | [monitor] control thread has ended
[2025-06-03 12:10:16] 2025-06-03 10:09:03,681 | INFO     | all workflow threads have been joined
[2025-06-03 12:10:16] 2025-06-03 10:09:03,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:10:16] 2025-06-03 10:09:03,681 | INFO     | traces error code: 0
[2025-06-03 12:10:16] 2025-06-03 10:09:03,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:10:16] 2025-06-03 10:09:03,815 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:10:16] 2025-06-03 10:09:03,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:10:16] 2025-06-03 10:09:03,820 [wrapper] pilotpid: 1558190
[2025-06-03 12:10:16] 2025-06-03 10:09:03,822 [wrapper] Pilot exit status: 0
[2025-06-03 12:10:16] 2025-06-03 10:09:03,832 [wrapper] pandaids: 6666594359
[2025-06-03 12:10:16] 2025-06-03 10:09:03,883 [wrapper] cleanup supervisor_pilot 1872510 1558191
[2025-06-03 12:10:16] 2025-06-03 10:09:03,886 [wrapper] Test setup, not cleaning
[2025-06-03 12:10:16] 2025-06-03 10:09:03,888 [wrapper] apfmon messages muted
[2025-06-03 12:10:16] 2025-06-03 10:09:03,891 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:10:16] 2025-06-03 10:09:03,893 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:10:16]  *** Error codes and diagnostics ***
[2025-06-03 12:10:16]     "exeErrorCode": 0,
[2025-06-03 12:10:16]     "exeErrorDiag": "",
[2025-06-03 12:10:16]     "pilotErrorCode": 0,
[2025-06-03 12:10:16]     "pilotErrorDiag": "",
[2025-06-03 12:10:16]  *** Listing of results directory ***
[2025-06-03 12:10:16] total 414224
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc    495897 May 27 03:12 pilot3.tar.gz
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc      5111 May 27 03:14 queuedata.json
[2025-06-03 12:10:16] -rwx------ 1 boinc boinc     37140 May 27 03:15 runpilot2-wrapper.sh
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc       100 Jun  3 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:10:16] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 07:36 run_atlas
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc       105 Jun  3 07:36 job.xml
[2025-06-03 12:10:16] -rw-r--r-- 2 boinc boinc 221431567 Jun  3 07:36 EVNT.44871834._002363.pool.root.1
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc      6419 Jun  3 07:36 init_data.xml
[2025-06-03 12:10:16] drwxrwx--x 2 boinc boinc      4096 Jun  3 07:36 shared
[2025-06-03 12:10:16] -rw-r--r-- 2 boinc boinc    508879 Jun  3 07:36 input.tar.gz
[2025-06-03 12:10:16] -rw-r--r-- 2 boinc boinc     15093 Jun  3 07:36 start_atlas.sh
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc         0 Jun  3 07:36 boinc_lockfile
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc      2559 Jun  3 07:36 pandaJob.out
[2025-06-03 12:10:16] -rw------- 1 boinc boinc    988073 Jun  3 07:36 agis_schedconf.cvmfs.json
[2025-06-03 12:10:16] drwx------ 4 boinc boinc      4096 Jun  3 07:36 pilot3
[2025-06-03 12:10:16] -rw------- 1 boinc boinc 195177687 Jun  3 12:07 HITS.44871837._059812.pool.root.1
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc       529 Jun  3 12:07 boinc_task_state.xml
[2025-06-03 12:10:16] -rw------- 1 boinc boinc        95 Jun  3 12:08 pilot_heartbeat.json
[2025-06-03 12:10:16] -rw------- 1 boinc boinc      1038 Jun  3 12:08 memory_monitor_summary.json
[2025-06-03 12:10:16] -rw------- 1 boinc boinc   1603667 Jun  3 12:08 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:10:16] -rw------- 1 boinc boinc    348684 Jun  3 12:08 log.44871837._059812.job.log.tgz.1
[2025-06-03 12:10:16] -rw------- 1 boinc boinc      7732 Jun  3 12:08 heartbeat.json
[2025-06-03 12:10:16] -rw------- 1 boinc boinc      4436 Jun  3 12:09 pilotlog.txt
[2025-06-03 12:10:16] -rw------- 1 boinc boinc   1508498 Jun  3 12:09 log.44871837._059812.job.log.1
[2025-06-03 12:10:16] -rw------- 1 boinc boinc       357 Jun  3 12:09 output.list
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc       620 Jun  3 12:09 runtime_log
[2025-06-03 12:10:16] -rw------- 1 boinc boinc   1873920 Jun  3 12:09 result.tar.gz
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc      9026 Jun  3 12:09 runtime_log.err
[2025-06-03 12:10:16] -rw------- 1 boinc boinc       666 Jun  3 12:09 pM9NDm65xd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmk7QKDmCTtUom.diag
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc        26 Jun  3 12:10 wrapper_checkpoint.txt
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc      8192 Jun  3 12:10 boinc_mmap_file
[2025-06-03 12:10:16] -rw-r--r-- 1 boinc boinc     20895 Jun  3 12:10 stderr.txt
[2025-06-03 12:10:16] HITS file was successfully produced:
[2025-06-03 12:10:16] -rw------- 1 boinc boinc 195177687 Jun  3 12:07 shared/HITS.pool.root.1
[2025-06-03 12:10:16]  *** Contents of shared directory: ***
[2025-06-03 12:10:16] total 409204
[2025-06-03 12:10:16] -rw-r--r-- 2 boinc boinc 221431567 Jun  3 07:36 ATLAS.root_0
[2025-06-03 12:10:16] -rw-r--r-- 2 boinc boinc    508879 Jun  3 07:36 input.tar.gz
[2025-06-03 12:10:16] -rw-r--r-- 2 boinc boinc     15093 Jun  3 07:36 start_atlas.sh
[2025-06-03 12:10:16] -rw------- 1 boinc boinc 195177687 Jun  3 12:07 HITS.pool.root.1
[2025-06-03 12:10:16] -rw------- 1 boinc boinc   1873920 Jun  3 12:09 result.tar.gz
12:10:18 (1554607): run_atlas exited; CPU time 62629.095211
12:10:18 (1554607): called boinc_finish(0)

</stderr_txt>
]]>

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