Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:04:43 (4137747): wrapper (7.7.26015): starting
07:04:43 (4137747): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 07:04:43] Arguments: --nthreads 8
[2025-05-27 07:04:43] Threads: 8
[2025-05-27 07:04:43] Checking for CVMFS
[2025-05-27 07:04:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 07:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 07:04:43] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 07:04:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 07:04:44] 2.11.3.0 22717 391142 236124 146481 1 517 26674928 45568000 10670 130560 0 1837988727 99.752 1519354493 21851 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-05-27 07:04:44] CVMFS is ok
[2025-05-27 07:04:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 07:04:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 07:04:44] Further information can be found at the LHC@home message board.
[2025-05-27 07:04:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 07:04:44] Checking for apptainer binary...
[2025-05-27 07:04:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 07:04:44] Running /usr/bin/apptainer --version
[2025-05-27 07:04:44] apptainer version 1.3.3-1.el9
[2025-05-27 07:04:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 07:04:44] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0017.triumf.lcg
[2025-05-27 07:04:44] apptainer works
[2025-05-27 07:04:44] Set ATHENA_PROC_NUMBER=8
[2025-05-27 07:04:44] Set ATHENA_CORE_NUMBER=8
[2025-05-27 07:04:44] Starting ATLAS job with PandaID=6666949012
[2025-05-27 07:04:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 07:09:07]  *** The last 200 lines of the pilot log: ***
[2025-05-27 07:09:07] 2025-05-27 14:08:52,167 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6666949012/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 07:09:07] 2025-05-27 14:08:52,168 | INFO     | extracted standard info from prmon json
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | WARNING  | wrong length of table data, x=[1748354771.0], y=[1506.0] (must be same and length>=4)
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | ..............................
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . Timing measurements:
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . get job = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . initial setup = 4 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . payload setup = 13 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . stage-in = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . payload execution = 27 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . stage-out = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . log creation = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | ..............................
[2025-05-27 07:09:07] 2025-05-27 14:08:52,171 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 07:09:07] 2025-05-27 14:08:52,188 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666949012/pilotlog.txt
[2025-05-27 07:09:07] 2025-05-27 14:08:52,263 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-27 07:09:07] - Log from pilotlog.txt -
[2025-05-27 07:09:07] 2025-05-27 14:08:52,167 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-27 07:09:07] 2025-05-27 14:08:52,167 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6666949012/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 07:09:07] 2025-05-27 14:08:52,168 | INFO     | extracted standard info from prmon json
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | WARNING  | wrong length of table data, x=[1748354771.0], y=[1506.0] (must be same and length>=4)
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | ..............................
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . Timing measurements:
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . get job = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . initial setup = 4 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . payload setup = 13 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . stage-in = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . payload execution = 27 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . stage-out = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . log creation = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | ..............................
[2025-05-27 07:09:07] 2025-05-27 14:08:52,171 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 07:09:07] 2025-05-27 14:08:52,188 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666949012/pilotlog.txt
[2025-05-27 07:09:07] 2025-05-27 14:08:52,263 | WARNING  | 
[2025-05-27 07:09:07] [begin log extracts]
[2025-05-27 07:09:07] - Log from pilotlog.txt -
[2025-05-27 07:09:07] 2025-05-27 14:08:52,167 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-27 07:09:07] 2025-05-27 14:08:52,167 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6666949012/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 07:09:07] 2025-05-27 14:08:52,168 | INFO     | extracted standard info from prmon json
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 07:09:07] 2025-05-27 14:08:52,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | WARNING  | wrong length of table data, x=[1748354771.0], y=[1506.0] (must be same and length>=4)
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | ..............................
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . Timing measurements:
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . get job = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . initial setup = 4 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . payload setup = 13 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . stage-in = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . payload execution = 27 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . stage-out = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | . log creation = 0 s
[2025-05-27 07:09:07] 2025-05-27 14:08:52,170 | INFO     | ..............................
[2025-05-27 07:09:07] 2025-05-27 14:08:52,171 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 07:09:07] 2025-05-27 14:08:52,188 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666949012/pilotlog.txt
[2025-05-27 07:09:07] [end log extracts]
[2025-05-27 07:09:07] 2025-05-27 14:08:52,264 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-27 07:09:07] 2025-05-27 14:08:52,264 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-27 07:09:07] 2025-05-27 14:08:53,045 | INFO     | 
[2025-05-27 07:09:07] 2025-05-27 14:08:53,045 | INFO     | job summary report
[2025-05-27 07:09:07] 2025-05-27 14:08:53,045 | INFO     | --------------------------------------------------
[2025-05-27 07:09:07] 2025-05-27 14:08:53,045 | INFO     | PanDA job id: 6666949012
[2025-05-27 07:09:07] 2025-05-27 14:08:53,045 | INFO     | task id: 44871837
[2025-05-27 07:09:07] 2025-05-27 14:08:53,045 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-27 07:06:25,248 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | pilot state: failed 
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | transexitcode: 65
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | exeerrorcode: 65
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | exitcode: 65
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | cpuconsumptiontime: 15 s
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | nevents: 0
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | neventsw: 0
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | pid: 4147622
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | pgrp: 4147622
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | corecount: 8
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | event service: False
[2025-05-27 07:09:07] 2025-05-27 14:08:53,046 | INFO     | sizes: {0: 2405060, 1: 2405259, 11: 2405259, 20: 2405493, 22: 2405521, 45: 2433085, 47: 2433085, 184: 2433255}
[2025-05-27 07:09:07] 2025-05-27 14:08:53,047 | INFO     | --------------------------------------------------
[2025-05-27 07:09:07] 2025-05-27 14:08:53,047 | INFO     | 
[2025-05-27 07:09:07] 2025-05-27 14:08:53,047 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-27 07:09:07] 2025-05-27 14:08:53,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 07:09:07] 2025-05-27 14:08:53,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 07:09:07] 2025-05-27 14:08:53,268 | INFO     | job 6666949012 has completed (purged errors)
[2025-05-27 07:09:07] 2025-05-27 14:08:53,268 | INFO     | overall cleanup function is called
[2025-05-27 07:09:07] 2025-05-27 14:08:54,275 | INFO     | --- collectZombieJob: --- 10, [4147622]
[2025-05-27 07:09:07] 2025-05-27 14:08:54,275 | INFO     | zombie collector waiting for pid 4147622
[2025-05-27 07:09:07] 2025-05-27 14:08:54,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 07:09:07] 2025-05-27 14:08:54,275 | INFO     | collected zombie processes
[2025-05-27 07:09:07] 2025-05-27 14:08:54,275 | INFO     | will attempt to kill all subprocesses of pid=4147622
[2025-05-27 07:09:07] 2025-05-27 14:08:54,968 | INFO     | process IDs to be killed: [4147622] (in reverse order)
[2025-05-27 07:09:07] 2025-05-27 14:08:55,025 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 07:09:07] 2025-05-27 14:08:55,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 07:09:07] 2025-05-27 14:08:55,030 | INFO     | did not find any defunct processes belonging to 4147622
[2025-05-27 07:09:07] 2025-05-27 14:08:55,035 | INFO     | did not find any defunct processes belonging to 4147622
[2025-05-27 07:09:07] 2025-05-27 14:08:55,035 | INFO     | ready for new job
[2025-05-27 07:09:07] 2025-05-27 14:08:55,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 07:09:07] 2025-05-27 14:08:55,037 | INFO     | **************************************
[2025-05-27 07:09:07] 2025-05-27 14:08:55,037 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 07:09:07] 2025-05-27 14:08:55,037 | INFO     | **************************************
[2025-05-27 07:09:07] 2025-05-27 14:08:55,037 | INFO     | 
[2025-05-27 07:09:07] 2025-05-27 14:08:55,051 | INFO     | architecture information:
[2025-05-27 07:09:07] 2025-05-27 14:08:55,052 | INFO     | executing command: cat /etc/os-release
[2025-05-27 07:09:07] 2025-05-27 14:08:55,063 | INFO     | cat /etc/os-release:
[2025-05-27 07:09:07] NAME="CentOS Linux"
[2025-05-27 07:09:07] VERSION="7 (Core)"
[2025-05-27 07:09:07] ID="centos"
[2025-05-27 07:09:07] ID_LIKE="rhel fedora"
[2025-05-27 07:09:07] VERSION_ID="7"
[2025-05-27 07:09:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 07:09:07] ANSI_COLOR="0;31"
[2025-05-27 07:09:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 07:09:07] HOME_URL="https://www.centos.org/"
[2025-05-27 07:09:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 07:09:07] 
[2025-05-27 07:09:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 07:09:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 07:09:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 07:09:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 07:09:07] 
[2025-05-27 07:09:07] 2025-05-27 14:08:55,063 | INFO     | **************************************
[2025-05-27 07:09:07] 2025-05-27 14:08:55,567 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-27 07:09:07] 2025-05-27 14:08:55,670 | INFO     | sufficient remaining disk space (1248150421504 B)
[2025-05-27 07:09:07] 2025-05-27 14:08:55,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 07:09:07] 2025-05-27 14:08:55,671 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 07:09:07] 2025-05-27 14:08:55,671 | INFO     | update_server=False
[2025-05-27 07:09:07] 2025-05-27 14:08:55,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 07:09:07] 2025-05-27 14:08:55,682 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 07:09:07] 2025-05-27 14:08:55,682 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 07:09:07] 2025-05-27 14:08:55,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 07:09:07] 2025-05-27 14:08:55,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 07:09:07] 2025-05-27 14:08:55,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 07:09:07] 2025-05-27 14:08:55,853 | INFO     | aborting loop
[2025-05-27 07:09:07] 2025-05-27 14:08:56,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 07:09:07] 2025-05-27 14:08:56,612 | INFO     | all data control threads have been joined
[2025-05-27 07:09:07] 2025-05-27 14:08:56,677 | INFO     | [job] retrieve thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:56,812 | INFO     | all payload control threads have been joined
[2025-05-27 07:09:07] 2025-05-27 14:08:56,859 | INFO     | [job] job monitor thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:56,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 07:09:07] 2025-05-27 14:08:57,082 | INFO     | [job] validate thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:57,111 | INFO     | all job control threads have been joined
[2025-05-27 07:09:07] 2025-05-27 14:08:57,154 | INFO     | [payload] validate_post thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:57,156 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:57,259 | INFO     | [payload] failed_post thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:57,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:57,424 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:57,520 | INFO     | [data] copytool_in thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:57,618 | INFO     | [data] control thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:57,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 07:09:07] 2025-05-27 14:08:57,759 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:57,818 | INFO     | [payload] control thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:58,116 | INFO     | [job] control thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:58,673 | INFO     | [job] queue monitor thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:08:58,970 | INFO     | [data] copytool_out thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:09:00,160 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 07:09:07] 2025-05-27 14:09:02,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375733536576)>', '<ExcThread(monitor, started 140374815266560)>']
[2025-05-27 07:09:07] 2025-05-27 14:09:02,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 07:09:07] 2025-05-27 14:09:02,730 | INFO     | [monitor] control thread has ended
[2025-05-27 07:09:07] 2025-05-27 14:09:07,162 | INFO     | all workflow threads have been joined
[2025-05-27 07:09:07] 2025-05-27 14:09:07,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 07:09:07] 2025-05-27 14:09:07,162 | INFO     | traces error code: 0
[2025-05-27 07:09:07] 2025-05-27 14:09:07,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 07:09:07] 2025-05-27 14:09:07,558 [wrapper] ==== pilot stdout END ====
[2025-05-27 07:09:07] 2025-05-27 14:09:07,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 07:09:07] 2025-05-27 14:09:07,609 [wrapper] pilotpid: 4141306
[2025-05-27 07:09:07] 2025-05-27 14:09:07,637 [wrapper] Pilot exit status: 0
[2025-05-27 07:09:07] 2025-05-27 14:09:07,674 [wrapper] pandaids: 6666949012
[2025-05-27 07:09:07] 2025-05-27 14:09:07,705 [wrapper] cleanup supervisor_pilot 4141312 4141307
[2025-05-27 07:09:07] 2025-05-27 14:09:07,707 [wrapper] Test setup, not cleaning
[2025-05-27 07:09:07] 2025-05-27 14:09:07,709 [wrapper] apfmon messages muted
[2025-05-27 07:09:07] 2025-05-27 14:09:07,715 [wrapper] ==== wrapper stdout END ====
[2025-05-27 07:09:07] 2025-05-27 14:09:07,721 [wrapper] ==== wrapper stderr END ====
[2025-05-27 07:09:07]  *** Error codes and diagnostics ***
[2025-05-27 07:09:07]     "exeErrorCode": 65,
[2025-05-27 07:09:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 07:09:07]     "pilotErrorCode": 1305,
[2025-05-27 07:09:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 07:09:07]  *** Listing of results directory ***
[2025-05-27 07:09:07] total 223556
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc    495897 May 27 04:17 pilot3.tar.gz
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc      5111 May 27 04:24 queuedata.json
[2025-05-27 07:09:07] -rwx------. 1 boinc boinc     37140 May 27 04:25 runpilot2-wrapper.sh
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc       100 May 27 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 07:09:07] -rwxr-xr-x. 1 boinc boinc      7986 May 27 07:04 run_atlas
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc       105 May 27 07:04 job.xml
[2025-05-27 07:09:07] -rw-r--r--. 2 boinc boinc 224882549 May 27 07:04 EVNT.44871834._002621.pool.root.1
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc      6453 May 27 07:04 init_data.xml
[2025-05-27 07:09:07] -rw-r--r--. 2 boinc boinc     15093 May 27 07:04 start_atlas.sh
[2025-05-27 07:09:07] drwxrwx--x. 2 boinc boinc      4096 May 27 07:04 shared
[2025-05-27 07:09:07] -rw-r--r--. 2 boinc boinc    508875 May 27 07:04 input.tar.gz
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc         0 May 27 07:04 boinc_lockfile
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc      2559 May 27 07:04 pandaJob.out
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc    990967 May 27 07:05 agis_schedconf.cvmfs.json
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc   1603667 May 27 07:05 agis_ddmendpoints.agis.ALL.json
[2025-05-27 07:09:07] drwx------. 4 boinc boinc      4096 May 27 07:05 pilot3
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc       521 May 27 07:06 boinc_task_state.xml
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc       948 May 27 07:06 memory_monitor_summary.json
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc     20977 May 27 07:06 log.44871837._066573.job.log.tgz.1
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc        95 May 27 07:08 pilot_heartbeat.json
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc      8338 May 27 07:08 heartbeat.json
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc      8192 May 27 07:09 boinc_mmap_file
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc        22 May 27 07:09 wrapper_checkpoint.txt
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc      4475 May 27 07:09 pilotlog.txt
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc     78392 May 27 07:09 log.44871837._066573.job.log.1
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc       188 May 27 07:09 output.list
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc       620 May 27 07:09 runtime_log
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc    122880 May 27 07:09 result.tar.gz
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc      8647 May 27 07:09 runtime_log.err
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc       644 May 27 07:09 lTtNDmhb7d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmelRKDm3S2O0n.diag
[2025-05-27 07:09:07] -rw-r--r--. 1 boinc boinc     21851 May 27 07:09 stderr.txt
[2025-05-27 07:09:07] No HITS result produced
[2025-05-27 07:09:07]  *** Contents of shared directory: ***
[2025-05-27 07:09:07] total 220248
[2025-05-27 07:09:07] -rw-r--r--. 2 boinc boinc 224882549 May 27 07:04 ATLAS.root_0
[2025-05-27 07:09:07] -rw-r--r--. 2 boinc boinc     15093 May 27 07:04 start_atlas.sh
[2025-05-27 07:09:07] -rw-r--r--. 2 boinc boinc    508875 May 27 07:04 input.tar.gz
[2025-05-27 07:09:07] -rw-------. 1 boinc boinc    122880 May 27 07:09 result.tar.gz
07:09:09 (4137747): run_atlas exited; CPU time 24.138550
07:09:09 (4137747): called boinc_finish(0)

</stderr_txt>
]]>

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