Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:28:10 (4650): wrapper (7.7.26015): starting
01:28:10 (4650): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 01:28:10] Arguments: --nthreads 8
[2025-05-28 01:28:10] Threads: 8
[2025-05-28 01:28:10] Checking for CVMFS
[2025-05-28 01:28:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 01:28:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 01:28:12] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 01:28:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 01:28:13] 2.11.2.0 16148 22355 93068 146498 0 59 24329345 25165824 4178 130560 0 12801148 99.771 14330124 1726 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 01:28:13] CVMFS is ok
[2025-05-28 01:28:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 01:28:13] Checking for apptainer binary...
[2025-05-28 01:28:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 01:28:13] Running /usr/bin/apptainer --version
[2025-05-28 01:28:13] apptainer version 1.3.2-1.el7
[2025-05-28 01:28:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 01:28:20] cg-vwn372.simple-grid.lan
[2025-05-28 01:28:20] apptainer works
[2025-05-28 01:28:20] Set ATHENA_PROC_NUMBER=8
[2025-05-28 01:28:20] Set ATHENA_CORE_NUMBER=8
[2025-05-28 01:28:20] Starting ATLAS job with PandaID=6666807057
[2025-05-28 01:28:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 06:52:53]  *** The last 200 lines of the pilot log: ***
[2025-05-28 06:52:53] 2025-05-28 04:51:50,997 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6666807057/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 06:52:53] 2025-05-28 04:51:50,998 | INFO     | extracted standard info from prmon json
[2025-05-28 06:52:53] 2025-05-28 04:51:50,998 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 06:52:53] 2025-05-28 04:51:50,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 06:52:53] 2025-05-28 04:51:50,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 06:52:53] 2025-05-28 04:51:50,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 06:52:53] 2025-05-28 04:51:51,005 | INFO     | fitting pss+swap vs Time
[2025-05-28 06:52:53] 2025-05-28 04:51:51,005 | INFO     | sum of square deviations: 8884603792.5
[2025-05-28 06:52:53] 2025-05-28 04:51:51,008 | INFO     | sum of deviations: 92570730651.50003
[2025-05-28 06:52:53] 2025-05-28 04:51:51,008 | INFO     | mean x: 1748398458.5
[2025-05-28 06:52:53] 2025-05-28 04:51:51,009 | INFO     | mean y: 2463509.7418300654
[2025-05-28 06:52:53] 2025-05-28 04:51:51,009 | INFO     | -- intersect: -18214502215.83488
[2025-05-28 06:52:53] 2025-05-28 04:51:51,009 | INFO     | intersect: -18214502215.83488
[2025-05-28 06:52:53] 2025-05-28 04:51:51,009 | INFO     | chi2: 6.3515179351576885
[2025-05-28 06:52:53] 2025-05-28 04:51:51,010 | INFO     | sum of square deviations: 8456158550.0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,013 | INFO     | sum of deviations: 111956263746.0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,013 | INFO     | mean x: 1748398306.0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,013 | INFO     | mean y: 2470310.495016611
[2025-05-28 06:52:53] 2025-05-28 04:51:51,013 | INFO     | -- intersect: -23145646026.51425
[2025-05-28 06:52:53] 2025-05-28 04:51:51,013 | INFO     | intersect: -23145646026.51425
[2025-05-28 06:52:53] 2025-05-28 04:51:51,014 | INFO     | chi2: 5.5662704136323695
[2025-05-28 06:52:53] 2025-05-28 04:51:51,014 | INFO     | current chi2=5.5662704136323695 (change=12.363147353780143 %)
[2025-05-28 06:52:53] 2025-05-28 04:51:51,014 | INFO     | right removable region: 300
[2025-05-28 06:52:53] 2025-05-28 04:51:51,014 | INFO     | sum of square deviations: 8456158550.0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,017 | INFO     | sum of deviations: -12272323917.99999
[2025-05-28 06:52:53] 2025-05-28 04:51:51,018 | INFO     | mean x: 1748398611.0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,018 | INFO     | mean y: 2500795.6644518273
[2025-05-28 06:52:53] 2025-05-28 04:51:51,018 | INFO     | -- intersect: 2539931233.504724
[2025-05-28 06:52:53] 2025-05-28 04:51:51,018 | INFO     | intersect: 2539931233.504724
[2025-05-28 06:52:53] 2025-05-28 04:51:51,019 | INFO     | chi2: 1.8390464221701663
[2025-05-28 06:52:53] 2025-05-28 04:51:51,019 | INFO     | current chi2=1.8390464221701663 (change=71.04556043224794 %)
[2025-05-28 06:52:53] 2025-05-28 04:51:51,019 | INFO     | sum of square deviations: 8041713570.0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,022 | INFO     | sum of deviations: -49301962930.5
[2025-05-28 06:52:53] 2025-05-28 04:51:51,022 | INFO     | mean x: 1748398763.5
[2025-05-28 06:52:53] 2025-05-28 04:51:51,023 | INFO     | mean y: 2514335.7804054054
[2025-05-28 06:52:53] 2025-05-28 04:51:51,023 | INFO     | -- intersect: 10721559508.861475
[2025-05-28 06:52:53] 2025-05-28 04:51:51,023 | INFO     | intersect: 10721559508.861475
[2025-05-28 06:52:53] 2025-05-28 04:51:51,023 | INFO     | chi2: 1.0318731529566278
[2025-05-28 06:52:53] 2025-05-28 04:51:51,023 | INFO     | current chi2=1.0318731529566278 (change=43.8908588430864 %)
[2025-05-28 06:52:53] 2025-05-28 04:51:51,024 | INFO     | sum of square deviations: 7641036290.0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,027 | INFO     | sum of deviations: -53465772758.0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,027 | INFO     | mean x: 1748398916.0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,027 | INFO     | mean y: 2515920.2783505153
[2025-05-28 06:52:53] 2025-05-28 04:51:51,027 | INFO     | -- intersect: 12236393052.301437
[2025-05-28 06:52:53] 2025-05-28 04:51:51,027 | INFO     | intersect: 12236393052.301437
[2025-05-28 06:52:53] 2025-05-28 04:51:51,028 | INFO     | chi2: 1.0169700130020147
[2025-05-28 06:52:53] 2025-05-28 04:51:51,028 | INFO     | current chi2=1.0169700130020147 (change=1.4442802307542482 %)
[2025-05-28 06:52:53] 2025-05-28 04:51:51,028 | INFO     | left removable region: 30
[2025-05-28 06:52:53] 2025-05-28 04:51:51,028 | INFO     | sum of square deviations: 6103286527.5
[2025-05-28 06:52:53] 2025-05-28 04:51:51,031 | INFO     | sum of deviations: -4553561336.5
[2025-05-28 06:52:53] 2025-05-28 04:51:51,031 | INFO     | mean x: 1748399190.5
[2025-05-28 06:52:53] 2025-05-28 04:51:51,031 | INFO     | mean y: 2512038.907407407
[2025-05-28 06:52:53] 2025-05-28 04:51:51,031 | INFO     | -- intersect: 1306963815.6274214
[2025-05-28 06:52:53] 2025-05-28 04:51:51,031 | INFO     | intersect: 1306963815.6274214
[2025-05-28 06:52:53] 2025-05-28 04:51:51,032 | INFO     | chi2: 0.08241879258832069
[2025-05-28 06:52:53] 2025-05-28 04:51:51,032 | INFO     | -- intersect: 1306963815.6274214
[2025-05-28 06:52:53] 2025-05-28 04:51:51,032 | INFO     | current memory leak: -0.75 B/s (using 270 data points, chi2=0.08)
[2025-05-28 06:52:53] 2025-05-28 04:51:51,033 | INFO     | ..............................
[2025-05-28 06:52:53] 2025-05-28 04:51:51,033 | INFO     | . Timing measurements:
[2025-05-28 06:52:53] 2025-05-28 04:51:51,033 | INFO     | . get job = 0 s
[2025-05-28 06:52:53] 2025-05-28 04:51:51,033 | INFO     | . initial setup = 5 s
[2025-05-28 06:52:53] 2025-05-28 04:51:51,033 | INFO     | . payload setup = 156 s
[2025-05-28 06:52:53] 2025-05-28 04:51:51,033 | INFO     | . stage-in = 0 s
[2025-05-28 06:52:53] 2025-05-28 04:51:51,034 | INFO     | . payload execution = 18804 s
[2025-05-28 06:52:53] 2025-05-28 04:51:51,034 | INFO     | . stage-out = 3 s
[2025-05-28 06:52:53] 2025-05-28 04:51:51,034 | INFO     | . log creation = 1 s
[2025-05-28 06:52:53] 2025-05-28 04:51:51,034 | INFO     | ..............................
[2025-05-28 06:52:53] 2025-05-28 04:51:51,164 | INFO     | 
[2025-05-28 06:52:53] 2025-05-28 04:51:51,164 | INFO     | job summary report
[2025-05-28 06:52:53] 2025-05-28 04:51:51,164 | INFO     | --------------------------------------------------
[2025-05-28 06:52:53] 2025-05-28 04:51:51,164 | INFO     | PanDA job id: 6666807057
[2025-05-28 06:52:53] 2025-05-28 04:51:51,164 | INFO     | task id: 44871837
[2025-05-28 06:52:53] 2025-05-28 04:51:51,164 | INFO     | errors: (none)
[2025-05-28 06:52:53] 2025-05-28 04:51:51,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 06:52:53] 2025-05-28 04:51:51,164 | INFO     | pilot state: finished 
[2025-05-28 06:52:53] 2025-05-28 04:51:51,164 | INFO     | transexitcode: 0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | exeerrorcode: 0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | exeerrordiag: 
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | exitcode: 0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | exitmsg: OK
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | cpuconsumptiontime: 70866 s
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | nevents: 400
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | neventsw: 0
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | pid: 21043
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | pgrp: 21043
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | corecount: 8
[2025-05-28 06:52:53] 2025-05-28 04:51:51,165 | INFO     | event service: False
[2025-05-28 06:52:53] 2025-05-28 04:51:51,166 | INFO     | sizes: {0: 2405234, 1: 2405262, 12: 2405262, 23: 2405290, 33: 2405318, 44: 2405374, 55: 2405530, 66: 2405558, 76: 2405586, 87: 2405876, 18965: 2437944, 18970: 2446
[2025-05-28 06:52:53] 2025-05-28 04:51:51,166 | INFO     | --------------------------------------------------
[2025-05-28 06:52:53] 2025-05-28 04:51:51,166 | INFO     | 
[2025-05-28 06:52:53] 2025-05-28 04:51:51,166 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-05-28 06:52:53] 2025-05-28 04:51:51,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,770 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 06:52:53] 2025-05-28 04:51:51,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 06:52:53] 2025-05-28 04:51:51,772 | INFO     | job 6666807057 has completed (purged errors)
[2025-05-28 06:52:53] 2025-05-28 04:51:51,772 | INFO     | overall cleanup function is called
[2025-05-28 06:52:53] 2025-05-28 04:51:52,781 | INFO     | --- collectZombieJob: --- 10, [21043]
[2025-05-28 06:52:53] 2025-05-28 04:51:52,781 | INFO     | zombie collector waiting for pid 21043
[2025-05-28 06:52:53] 2025-05-28 04:51:52,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 06:52:53] 2025-05-28 04:51:52,781 | INFO     | collected zombie processes
[2025-05-28 06:52:53] 2025-05-28 04:51:52,781 | INFO     | will attempt to kill all subprocesses of pid=21043
[2025-05-28 06:52:53] 2025-05-28 04:51:52,891 | INFO     | process IDs to be killed: [21043] (in reverse order)
[2025-05-28 06:52:53] 2025-05-28 04:51:53,616 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 06:52:53] 2025-05-28 04:51:53,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 06:52:53] 2025-05-28 04:51:53,620 | INFO     | did not find any defunct processes belonging to 21043
[2025-05-28 06:52:53] 2025-05-28 04:51:53,623 | INFO     | did not find any defunct processes belonging to 21043
[2025-05-28 06:52:53] 2025-05-28 04:51:53,623 | INFO     | ready for new job
[2025-05-28 06:52:53] 2025-05-28 04:51:53,623 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 06:52:53] 2025-05-28 04:51:53,625 | INFO     | **************************************
[2025-05-28 06:52:53] 2025-05-28 04:51:53,626 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 06:52:53] 2025-05-28 04:51:53,626 | INFO     | **************************************
[2025-05-28 06:52:53] 2025-05-28 04:51:53,626 | INFO     | 
[2025-05-28 06:52:53] 2025-05-28 04:51:53,626 | INFO     | pilot is running in a VM
[2025-05-28 06:52:53] 2025-05-28 04:51:53,626 | INFO     | architecture information:
[2025-05-28 06:52:53] 2025-05-28 04:51:53,641 | INFO     | executing command: cat /etc/os-release
[2025-05-28 06:52:53] 2025-05-28 04:51:53,846 | INFO     | cat /etc/os-release:
[2025-05-28 06:52:53] NAME="CentOS Linux"
[2025-05-28 06:52:53] VERSION="7 (Core)"
[2025-05-28 06:52:53] ID="centos"
[2025-05-28 06:52:53] ID_LIKE="rhel fedora"
[2025-05-28 06:52:53] VERSION_ID="7"
[2025-05-28 06:52:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 06:52:53] ANSI_COLOR="0;31"
[2025-05-28 06:52:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 06:52:53] HOME_URL="https://www.centos.org/"
[2025-05-28 06:52:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 06:52:53] 
[2025-05-28 06:52:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 06:52:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 06:52:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 06:52:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 06:52:53] 
[2025-05-28 06:52:53] 2025-05-28 04:51:53,847 | INFO     | **************************************
[2025-05-28 06:52:53] 2025-05-28 04:51:54,350 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-05-28 06:52:53] 2025-05-28 04:51:54,521 | INFO     | sufficient remaining disk space (493809041408 B)
[2025-05-28 06:52:53] 2025-05-28 04:51:54,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 06:52:53] 2025-05-28 04:51:54,522 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 06:52:53] 2025-05-28 04:51:54,522 | INFO     | update_server=False
[2025-05-28 06:52:53] 2025-05-28 04:51:54,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 06:52:53] 2025-05-28 04:51:54,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 06:52:53] 2025-05-28 04:51:54,584 | INFO     | all payload control threads have been joined
[2025-05-28 06:52:53] 2025-05-28 04:51:54,763 | INFO     | all data control threads have been joined
[2025-05-28 06:52:53] 2025-05-28 04:51:55,051 | INFO     | all job control threads have been joined
[2025-05-28 06:52:53] 2025-05-28 04:51:55,262 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 06:52:53] 2025-05-28 04:51:55,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 06:52:53] 2025-05-28 04:51:55,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 06:52:53] 2025-05-28 04:51:55,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 06:52:53] 2025-05-28 04:51:55,462 | INFO     | aborting loop
[2025-05-28 06:52:53] 2025-05-28 04:51:55,528 | INFO     | [job] retrieve thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:55,540 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:55,557 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:55,590 | INFO     | [payload] control thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:55,660 | INFO     | [job] validate thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:55,715 | INFO     | [payload] failed_post thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:55,769 | INFO     | [data] control thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:56,035 | INFO     | [payload] validate_post thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:56,057 | INFO     | [job] control thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:56,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 06:52:53] 2025-05-28 04:51:56,468 | INFO     | [job] job monitor thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:56,532 | INFO     | [data] copytool_out thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:56,565 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:56,608 | INFO     | [data] copytool_in thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:56,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:51:57,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 06:52:53] 2025-05-28 04:51:57,185 | INFO     | [job] queue monitor thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:52:01,068 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 06:52:53] 2025-05-28 04:52:01,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140487704221504)>', '<ExcThread(monitor, started 140487272937216)>']
[2025-05-28 06:52:53] 2025-05-28 04:52:01,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 06:52:53] 2025-05-28 04:52:01,298 | INFO     | [monitor] control thread has ended
[2025-05-28 06:52:53] 2025-05-28 04:52:06,099 | INFO     | all workflow threads have been joined
[2025-05-28 06:52:53] 2025-05-28 04:52:06,099 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 06:52:53] 2025-05-28 04:52:06,099 | INFO     | traces error code: 0
[2025-05-28 06:52:53] 2025-05-28 04:52:06,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 06:52:53] 2025-05-28 04:52:06,354 [wrapper] ==== pilot stdout END ====
[2025-05-28 06:52:53] 2025-05-28 04:52:06,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 06:52:53] 2025-05-28 04:52:06,446 [wrapper] pilotpid: 14392
[2025-05-28 06:52:53] 2025-05-28 04:52:06,488 [wrapper] Pilot exit status: 0
[2025-05-28 06:52:53] 2025-05-28 04:52:06,794 [wrapper] pandaids: 6666807057
[2025-05-28 06:52:53] 2025-05-28 04:52:07,074 [wrapper] cleanup supervisor_pilot 24080 14393
[2025-05-28 06:52:53] 2025-05-28 04:52:07,090 [wrapper] Test setup, not cleaning
[2025-05-28 06:52:53] 2025-05-28 04:52:07,168 [wrapper] apfmon messages muted
[2025-05-28 06:52:53] 2025-05-28 04:52:07,257 [wrapper] ==== wrapper stdout END ====
[2025-05-28 06:52:53] 2025-05-28 04:52:07,311 [wrapper] ==== wrapper stderr END ====
[2025-05-28 06:52:53]  *** Error codes and diagnostics ***
[2025-05-28 06:52:53]     "exeErrorCode": 0,
[2025-05-28 06:52:53]     "exeErrorDiag": "",
[2025-05-28 06:52:53]     "pilotErrorCode": 0,
[2025-05-28 06:52:53]     "pilotErrorDiag": "",
[2025-05-28 06:52:53]  *** Listing of results directory ***
[2025-05-28 06:52:53] total 420208
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc    495897 May 27 08:47 pilot3.tar.gz
[2025-05-28 06:52:53] -rwx------. 1 boinc boinc     37140 May 27 09:08 runpilot2-wrapper.sh
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc      5111 May 27 09:08 queuedata.json
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc       100 May 28 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 06:52:53] -rwxr-xr-x. 1 boinc boinc      7986 May 28 01:28 run_atlas
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc       105 May 28 01:28 job.xml
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc      6372 May 28 01:28 init_data.xml
[2025-05-28 06:52:53] -rw-r--r--. 2 boinc boinc 225068669 May 28 01:28 EVNT.44871834._002516.pool.root.1
[2025-05-28 06:52:53] -rw-r--r--. 2 boinc boinc     15093 May 28 01:28 start_atlas.sh
[2025-05-28 06:52:53] drwxrwx--x. 2 boinc boinc        68 May 28 01:28 shared
[2025-05-28 06:52:53] -rw-r--r--. 2 boinc boinc    508870 May 28 01:28 input.tar.gz
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc         0 May 28 01:28 boinc_lockfile
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc      2558 May 28 01:28 pandaJob.out
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc    991177 May 28 01:31 agis_schedconf.cvmfs.json
[2025-05-28 06:52:53] drwx------. 4 boinc boinc      4096 May 28 01:31 pilot3
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc 197269201 May 28 06:49 HITS.44871837._063805.pool.root.1
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc       531 May 28 06:49 boinc_task_state.xml
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc      1017 May 28 06:50 memory_monitor_summary.json
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc   1603667 May 28 06:50 agis_ddmendpoints.agis.ALL.json
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc    434272 May 28 06:50 log.44871837._063805.job.log.tgz.1
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc        95 May 28 06:50 pilot_heartbeat.json
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc      7692 May 28 06:51 heartbeat.json
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc      4417 May 28 06:52 pilotlog.txt
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc   1629233 May 28 06:52 log.44871837._063805.job.log.1
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc       357 May 28 06:52 output.list
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc       620 May 28 06:52 runtime_log
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc   2078720 May 28 06:52 result.tar.gz
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc      8673 May 28 06:52 runtime_log.err
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc       657 May 28 06:52 KHTNDmrb3d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmWURKDm1t4cqn.diag
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc      8192 May 28 06:52 boinc_mmap_file
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc        28 May 28 06:52 wrapper_checkpoint.txt
[2025-05-28 06:52:53] -rw-r--r--. 1 boinc boinc     20527 May 28 06:52 stderr.txt
[2025-05-28 06:52:53] HITS file was successfully produced:
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc 197269201 May 28 06:49 shared/HITS.pool.root.1
[2025-05-28 06:52:53]  *** Contents of shared directory: ***
[2025-05-28 06:52:53] total 414992
[2025-05-28 06:52:53] -rw-r--r--. 2 boinc boinc 225068669 May 28 01:28 ATLAS.root_0
[2025-05-28 06:52:53] -rw-r--r--. 2 boinc boinc     15093 May 28 01:28 start_atlas.sh
[2025-05-28 06:52:53] -rw-r--r--. 2 boinc boinc    508870 May 28 01:28 input.tar.gz
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc 197269201 May 28 06:49 HITS.pool.root.1
[2025-05-28 06:52:53] -rw-------. 1 boinc boinc   2078720 May 28 06:52 result.tar.gz
06:52:55 (4650): run_atlas exited; CPU time 71133.929984
06:52:55 (4650): called boinc_finish(0)

</stderr_txt>
]]>

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