Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:11:17 (1917328): wrapper (7.7.26015): starting
05:11:17 (1917328): wrapper: running run_atlas (--nthreads 12)
[2025-05-27 05:11:17] Arguments: --nthreads 12
[2025-05-27 05:11:17] Threads: 12
[2025-05-27 05:11:17] Checking for CVMFS
[2025-05-27 05:11:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 05:11:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 05:11:17] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 05:11:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 05:11:17] 2.11.5.0 361037 12361 236812 146479 0 464 29745326 45568000 12651 130560 0 133046040 99.800 81444828 25025 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-27 05:11:17] CVMFS is ok
[2025-05-27 05:11:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 05:11:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 05:11:17] Further information can be found at the LHC@home message board.
[2025-05-27 05:11:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 05:11:17] Checking for apptainer binary...
[2025-05-27 05:11:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 05:11:17] Running /usr/bin/apptainer --version
[2025-05-27 05:11:17] apptainer version 1.4.0-1.el9
[2025-05-27 05:11:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 05:11:17] wns0026.triumf.lcg
[2025-05-27 05:11:17] apptainer works
[2025-05-27 05:11:17] Set ATHENA_PROC_NUMBER=12
[2025-05-27 05:11:17] Set ATHENA_CORE_NUMBER=12
[2025-05-27 05:11:17] Starting ATLAS job with PandaID=6666851199
[2025-05-27 05:11:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 05:14:17]  *** The last 200 lines of the pilot log: ***
[2025-05-27 05:14:17] 2025-05-27 12:14:03,407 | INFO     | extracted standard info from prmon json
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | found no stored workdir sizes
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | WARNING  | wrong length of table data, x=[1748347907.0], y=[1045.0] (must be same and length>=4)
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | ..............................
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . Timing measurements:
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . get job = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . initial setup = 2 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . payload setup = 4 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . stage-in = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . payload execution = 14 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . stage-out = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . log creation = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | ..............................
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 05:14:17] 2025-05-27 12:14:03,410 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666851199/pilotlog.txt
[2025-05-27 05:14:17] 2025-05-27 12:14:03,420 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-27 05:14:17] - Log from pilotlog.txt -
[2025-05-27 05:14:17] 2025-05-27 12:14:03,407 | INFO     | extracted standard info from prmon json
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | found no stored workdir sizes
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | WARNING  | wrong length of table data, x=[1748347907.0], y=[1045.0] (must be same and length>=4)
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | ..............................
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . Timing measurements:
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . get job = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . initial setup = 2 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . payload setup = 4 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . stage-in = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . payload execution = 14 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . stage-out = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . log creation = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | ..............................
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 05:14:17] 2025-05-27 12:14:03,410 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666851199/pilotlog.txt
[2025-05-27 05:14:17] 2025-05-27 12:14:03,420 | WARNING  | 
[2025-05-27 05:14:17] [begin log extracts]
[2025-05-27 05:14:17] - Log from pilotlog.txt -
[2025-05-27 05:14:17] 2025-05-27 12:14:03,407 | INFO     | extracted standard info from prmon json
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | WARNING  | found no stored workdir sizes
[2025-05-27 05:14:17] 2025-05-27 12:14:03,408 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | WARNING  | wrong length of table data, x=[1748347907.0], y=[1045.0] (must be same and length>=4)
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | ..............................
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . Timing measurements:
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . get job = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . initial setup = 2 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . payload setup = 4 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . stage-in = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . payload execution = 14 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . stage-out = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | . log creation = 0 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | ..............................
[2025-05-27 05:14:17] 2025-05-27 12:14:03,409 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 05:14:17] 2025-05-27 12:14:03,410 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666851199/pilotlog.txt
[2025-05-27 05:14:17] [end log extracts]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,420 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-27 05:14:17] 2025-05-27 12:14:03,421 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | 
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | job summary report
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | --------------------------------------------------
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | PanDA job id: 6666851199
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | task id: 44871837
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-27 05:11:53,482 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | pilot state: failed 
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | transexitcode: 65
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | exeerrorcode: 65
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | exitcode: 65
[2025-05-27 05:14:17] 2025-05-27 12:14:03,477 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | cpuconsumptiontime: 15 s
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | nevents: 0
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | neventsw: 0
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | pid: 1935434
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | pgrp: 1935434
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | corecount: 12
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | event service: False
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | sizes: {0: 2405229, 3: 2405435, 11: 2405463, 22: 2428731, 23: 2432966, 25: 2432994, 144: 2433264}
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | --------------------------------------------------
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | 
[2025-05-27 05:14:17] 2025-05-27 12:14:03,478 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-27 05:14:17] 2025-05-27 12:14:03,491 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,493 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,493 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 05:14:17] 2025-05-27 12:14:03,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,493 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 05:14:17] 2025-05-27 12:14:03,493 | INFO     | job 6666851199 has completed (purged errors)
[2025-05-27 05:14:17] 2025-05-27 12:14:03,493 | INFO     | overall cleanup function is called
[2025-05-27 05:14:17] 2025-05-27 12:14:04,498 | INFO     | --- collectZombieJob: --- 10, [1935434]
[2025-05-27 05:14:17] 2025-05-27 12:14:04,499 | INFO     | zombie collector waiting for pid 1935434
[2025-05-27 05:14:17] 2025-05-27 12:14:04,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 05:14:17] 2025-05-27 12:14:04,499 | INFO     | collected zombie processes
[2025-05-27 05:14:17] 2025-05-27 12:14:04,499 | INFO     | will attempt to kill all subprocesses of pid=1935434
[2025-05-27 05:14:17] 2025-05-27 12:14:04,657 | INFO     | process IDs to be killed: [1935434] (in reverse order)
[2025-05-27 05:14:17] 2025-05-27 12:14:04,714 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 05:14:17] 2025-05-27 12:14:04,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 05:14:17] 2025-05-27 12:14:04,721 | INFO     | did not find any defunct processes belonging to 1935434
[2025-05-27 05:14:17] 2025-05-27 12:14:04,727 | INFO     | did not find any defunct processes belonging to 1935434
[2025-05-27 05:14:17] 2025-05-27 12:14:04,727 | INFO     | ready for new job
[2025-05-27 05:14:17] 2025-05-27 12:14:04,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 05:14:17] 2025-05-27 12:14:04,729 | INFO     | **************************************
[2025-05-27 05:14:17] 2025-05-27 12:14:04,729 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 05:14:17] 2025-05-27 12:14:04,729 | INFO     | **************************************
[2025-05-27 05:14:17] 2025-05-27 12:14:04,729 | INFO     | 
[2025-05-27 05:14:17] 2025-05-27 12:14:04,731 | INFO     | architecture information:
[2025-05-27 05:14:17] 2025-05-27 12:14:04,731 | INFO     | executing command: cat /etc/os-release
[2025-05-27 05:14:17] 2025-05-27 12:14:04,741 | INFO     | cat /etc/os-release:
[2025-05-27 05:14:17] NAME="CentOS Linux"
[2025-05-27 05:14:17] VERSION="7 (Core)"
[2025-05-27 05:14:17] ID="centos"
[2025-05-27 05:14:17] ID_LIKE="rhel fedora"
[2025-05-27 05:14:17] VERSION_ID="7"
[2025-05-27 05:14:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 05:14:17] ANSI_COLOR="0;31"
[2025-05-27 05:14:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 05:14:17] HOME_URL="https://www.centos.org/"
[2025-05-27 05:14:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 05:14:17] 
[2025-05-27 05:14:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 05:14:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 05:14:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 05:14:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 05:14:17] 
[2025-05-27 05:14:17] 2025-05-27 12:14:04,741 | INFO     | **************************************
[2025-05-27 05:14:17] 2025-05-27 12:14:05,244 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-27 05:14:17] 2025-05-27 12:14:05,257 | INFO     | sufficient remaining disk space (1855620907008 B)
[2025-05-27 05:14:17] 2025-05-27 12:14:05,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 05:14:17] 2025-05-27 12:14:05,257 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 05:14:17] 2025-05-27 12:14:05,257 | INFO     | update_server=False
[2025-05-27 05:14:17] 2025-05-27 12:14:05,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 05:14:17] 2025-05-27 12:14:05,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 05:14:17] 2025-05-27 12:14:05,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 05:14:17] 2025-05-27 12:14:05,549 | INFO     | all job control threads have been joined
[2025-05-27 05:14:17] 2025-05-27 12:14:05,726 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 05:14:17] 2025-05-27 12:14:05,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 05:14:17] 2025-05-27 12:14:05,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 05:14:17] 2025-05-27 12:14:06,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 05:14:17] 2025-05-27 12:14:06,004 | INFO     | aborting loop
[2025-05-27 05:14:17] 2025-05-27 12:14:06,203 | INFO     | all payload control threads have been joined
[2025-05-27 05:14:17] 2025-05-27 12:14:06,262 | INFO     | [job] retrieve thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:06,263 | INFO     | [job] queue monitor thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:06,340 | INFO     | [payload] validate_post thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:06,351 | INFO     | all data control threads have been joined
[2025-05-27 05:14:17] 2025-05-27 12:14:06,554 | INFO     | [job] control thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:06,595 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:06,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 05:14:17] 2025-05-27 12:14:06,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:06,976 | INFO     | [payload] failed_post thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:07,009 | INFO     | [job] job monitor thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:07,209 | INFO     | [payload] control thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:07,263 | INFO     | [data] copytool_out thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:07,356 | INFO     | [data] control thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:07,498 | INFO     | [job] validate thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:07,630 | INFO     | [data] copytool_in thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:07,631 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:07,723 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:10,717 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 05:14:17] 2025-05-27 12:14:12,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967160162112)>', '<ExcThread(monitor, started 139966399112960)>']
[2025-05-27 05:14:17] 2025-05-27 12:14:12,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 05:14:17] 2025-05-27 12:14:12,762 | INFO     | [monitor] control thread has ended
[2025-05-27 05:14:17] 2025-05-27 12:14:17,110 | INFO     | all workflow threads have been joined
[2025-05-27 05:14:17] 2025-05-27 12:14:17,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 05:14:17] 2025-05-27 12:14:17,110 | INFO     | traces error code: 0
[2025-05-27 05:14:17] 2025-05-27 12:14:17,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 05:14:17] 2025-05-27 12:14:17,217 [wrapper] ==== pilot stdout END ====
[2025-05-27 05:14:17] 2025-05-27 12:14:17,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 05:14:17] 2025-05-27 12:14:17,222 [wrapper] pilotpid: 1920898
[2025-05-27 05:14:17] 2025-05-27 12:14:17,223 [wrapper] Pilot exit status: 0
[2025-05-27 05:14:17] 2025-05-27 12:14:17,231 [wrapper] pandaids: 6666851199
[2025-05-27 05:14:17] 2025-05-27 12:14:17,269 [wrapper] cleanup supervisor_pilot 1920904 1920899
[2025-05-27 05:14:17] 2025-05-27 12:14:17,271 [wrapper] Test setup, not cleaning
[2025-05-27 05:14:17] 2025-05-27 12:14:17,273 [wrapper] apfmon messages muted
[2025-05-27 05:14:17] 2025-05-27 12:14:17,275 [wrapper] ==== wrapper stdout END ====
[2025-05-27 05:14:17] 2025-05-27 12:14:17,277 [wrapper] ==== wrapper stderr END ====
[2025-05-27 05:14:17]  *** Error codes and diagnostics ***
[2025-05-27 05:14:17]     "exeErrorCode": 65,
[2025-05-27 05:14:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 05:14:17]     "pilotErrorCode": 1305,
[2025-05-27 05:14:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 05:14:17]  *** Listing of results directory ***
[2025-05-27 05:14:17] total 222560
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc      5111 May 27 02:25 queuedata.json
[2025-05-27 05:14:17] -rwx------. 1 boinc boinc     37140 May 27 02:27 runpilot2-wrapper.sh
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc    495897 May 27 02:27 pilot3.tar.gz
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc       100 May 27 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 05:14:17] -rwxr-xr-x. 1 boinc boinc      7986 May 27 05:11 run_atlas
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc       105 May 27 05:11 job.xml
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc      6601 May 27 05:11 init_data.xml
[2025-05-27 05:14:17] -rw-r--r--. 2 boinc boinc 223876013 May 27 05:11 EVNT.44871834._002572.pool.root.1
[2025-05-27 05:14:17] -rw-r--r--. 2 boinc boinc    508866 May 27 05:11 input.tar.gz
[2025-05-27 05:14:17] -rw-r--r--. 2 boinc boinc     15093 May 27 05:11 start_atlas.sh
[2025-05-27 05:14:17] drwxrwx--x. 2 boinc boinc      4096 May 27 05:11 shared
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc         0 May 27 05:11 boinc_lockfile
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc      2558 May 27 05:11 pandaJob.out
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc    990747 May 27 05:11 agis_schedconf.cvmfs.json
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc   1603667 May 27 05:11 agis_ddmendpoints.agis.ALL.json
[2025-05-27 05:14:17] drwx------. 4 boinc boinc      4096 May 27 05:11 pilot3
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc       522 May 27 05:11 boinc_task_state.xml
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc       992 May 27 05:11 memory_monitor_summary.json
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc     20721 May 27 05:12 log.44871837._065247.job.log.tgz.1
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc        95 May 27 05:13 pilot_heartbeat.json
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc      8362 May 27 05:14 heartbeat.json
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc        22 May 27 05:14 wrapper_checkpoint.txt
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc      4352 May 27 05:14 pilotlog.txt
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc      8192 May 27 05:14 boinc_mmap_file
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc     72735 May 27 05:14 log.44871837._065247.job.log.1
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc       188 May 27 05:14 output.list
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc       620 May 27 05:14 runtime_log
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc    112640 May 27 05:14 result.tar.gz
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc      8484 May 27 05:14 runtime_log.err
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc       644 May 27 05:14 g1rLDm6l5d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsdRKDmrlHbtn.diag
[2025-05-27 05:14:17] -rw-r--r--. 1 boinc boinc     21437 May 27 05:14 stderr.txt
[2025-05-27 05:14:17] No HITS result produced
[2025-05-27 05:14:17]  *** Contents of shared directory: ***
[2025-05-27 05:14:17] total 219260
[2025-05-27 05:14:17] -rw-r--r--. 2 boinc boinc 223876013 May 27 05:11 ATLAS.root_0
[2025-05-27 05:14:17] -rw-r--r--. 2 boinc boinc    508866 May 27 05:11 input.tar.gz
[2025-05-27 05:14:17] -rw-r--r--. 2 boinc boinc     15093 May 27 05:11 start_atlas.sh
[2025-05-27 05:14:17] -rw-------. 1 boinc boinc    112640 May 27 05:14 result.tar.gz
05:14:18 (1917328): run_atlas exited; CPU time 18.338863
05:14:18 (1917328): called boinc_finish(0)

</stderr_txt>
]]>

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