Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:40:00 (2149516): wrapper (7.7.26015): starting
04:40:00 (2149516): wrapper: running run_atlas (--nthreads 12)
[2025-05-27 04:40:00] Arguments: --nthreads 12
[2025-05-27 04:40:00] Threads: 12
[2025-05-27 04:40:00] Checking for CVMFS
[2025-05-27 04:40:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 04:40:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 04:40:01] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 04:40:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 04:40:02] 2.11.5.0 2456725 12067 203540 146479 2 198 34448342 45568000 9362 130560 0 125471074 99.809 77811674 35945 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-27 04:40:02] CVMFS is ok
[2025-05-27 04:40:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 04:40:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 04:40:02] Further information can be found at the LHC@home message board.
[2025-05-27 04:40:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 04:40:02] Checking for apptainer binary...
[2025-05-27 04:40:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 04:40:02] Running /usr/bin/apptainer --version
[2025-05-27 04:40:02] apptainer version 1.4.0-1.el9
[2025-05-27 04:40:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 04:40:03] wns0077.triumf.lcg
[2025-05-27 04:40:03] apptainer works
[2025-05-27 04:40:03] Set ATHENA_PROC_NUMBER=12
[2025-05-27 04:40:03] Set ATHENA_CORE_NUMBER=12
[2025-05-27 04:40:03] Starting ATLAS job with PandaID=6666763208
[2025-05-27 04:40:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 04:44:02]  *** The last 200 lines of the pilot log: ***
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | INFO     | extracted standard info from prmon json
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | found no stored workdir sizes
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | WARNING  | wrong length of table data, x=[1748346074.0], y=[2257.0] (must be same and length>=4)
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | ..............................
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . Timing measurements:
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . get job = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . initial setup = 3 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . payload setup = 14 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . stage-in = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . payload execution = 21 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | . stage-out = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | . log creation = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | ..............................
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666763208/pilotlog.txt
[2025-05-27 04:44:02] 2025-05-27 11:43:46,969 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-27 04:44:02] - Log from pilotlog.txt -
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | INFO     | extracted standard info from prmon json
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | found no stored workdir sizes
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | WARNING  | wrong length of table data, x=[1748346074.0], y=[2257.0] (must be same and length>=4)
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | ..............................
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . Timing measurements:
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . get job = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . initial setup = 3 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . payload setup = 14 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . stage-in = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . payload execution = 21 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | . stage-out = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | . log creation = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | ..............................
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666763208/pilotlog.txt
[2025-05-27 04:44:02] 2025-05-27 11:43:46,970 | WARNING  | 
[2025-05-27 04:44:02] [begin log extracts]
[2025-05-27 04:44:02] - Log from pilotlog.txt -
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | INFO     | extracted standard info from prmon json
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 04:44:02] 2025-05-27 11:43:46,956 | WARNING  | found no stored workdir sizes
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | WARNING  | wrong length of table data, x=[1748346074.0], y=[2257.0] (must be same and length>=4)
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | ..............................
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . Timing measurements:
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . get job = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . initial setup = 3 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . payload setup = 14 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . stage-in = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,957 | INFO     | . payload execution = 21 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | . stage-out = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | . log creation = 0 s
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | ..............................
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 04:44:02] 2025-05-27 11:43:46,958 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666763208/pilotlog.txt
[2025-05-27 04:44:02] [end log extracts]
[2025-05-27 04:44:02] 2025-05-27 11:43:46,970 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-27 04:44:02] 2025-05-27 11:43:46,971 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | 
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | job summary report
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | --------------------------------------------------
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | PanDA job id: 6666763208
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | task id: 44871837
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-27 04:41:24,009 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | pilot state: failed 
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | transexitcode: 65
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | exeerrorcode: 65
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | exitcode: 65
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | cpuconsumptiontime: 14 s
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | nevents: 0
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | neventsw: 0
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | pid: 2159588
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | pgrp: 2159588
[2025-05-27 04:44:02] 2025-05-27 11:43:47,029 | INFO     | corecount: 12
[2025-05-27 04:44:02] 2025-05-27 11:43:47,030 | INFO     | event service: False
[2025-05-27 04:44:02] 2025-05-27 11:43:47,030 | INFO     | sizes: {0: 2404406, 1: 2405259, 12: 2405259, 13: 2405493, 22: 2405549, 39: 2428842, 40: 2433077, 42: 2433105, 174: 2433275}
[2025-05-27 04:44:02] 2025-05-27 11:43:47,030 | INFO     | --------------------------------------------------
[2025-05-27 04:44:02] 2025-05-27 11:43:47,030 | INFO     | 
[2025-05-27 04:44:02] 2025-05-27 11:43:47,030 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | job 6666763208 has completed (purged errors)
[2025-05-27 04:44:02] 2025-05-27 11:43:47,183 | INFO     | overall cleanup function is called
[2025-05-27 04:44:02] 2025-05-27 11:43:48,193 | INFO     | --- collectZombieJob: --- 10, [2159588]
[2025-05-27 04:44:02] 2025-05-27 11:43:48,193 | INFO     | zombie collector waiting for pid 2159588
[2025-05-27 04:44:02] 2025-05-27 11:43:48,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 04:44:02] 2025-05-27 11:43:48,194 | INFO     | collected zombie processes
[2025-05-27 04:44:02] 2025-05-27 11:43:48,194 | INFO     | will attempt to kill all subprocesses of pid=2159588
[2025-05-27 04:44:02] 2025-05-27 11:43:48,423 | INFO     | process IDs to be killed: [2159588] (in reverse order)
[2025-05-27 04:44:02] 2025-05-27 11:43:48,703 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 04:44:02] 2025-05-27 11:43:48,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 04:44:02] 2025-05-27 11:43:48,717 | INFO     | did not find any defunct processes belonging to 2159588
[2025-05-27 04:44:02] 2025-05-27 11:43:48,734 | INFO     | did not find any defunct processes belonging to 2159588
[2025-05-27 04:44:02] 2025-05-27 11:43:48,734 | INFO     | ready for new job
[2025-05-27 04:44:02] 2025-05-27 11:43:48,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 04:44:02] 2025-05-27 11:43:48,744 | INFO     | **************************************
[2025-05-27 04:44:02] 2025-05-27 11:43:48,744 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 04:44:02] 2025-05-27 11:43:48,744 | INFO     | **************************************
[2025-05-27 04:44:02] 2025-05-27 11:43:48,744 | INFO     | 
[2025-05-27 04:44:02] 2025-05-27 11:43:48,746 | INFO     | architecture information:
[2025-05-27 04:44:02] 2025-05-27 11:43:48,748 | INFO     | executing command: cat /etc/os-release
[2025-05-27 04:44:02] 2025-05-27 11:43:48,786 | INFO     | cat /etc/os-release:
[2025-05-27 04:44:02] NAME="CentOS Linux"
[2025-05-27 04:44:02] VERSION="7 (Core)"
[2025-05-27 04:44:02] ID="centos"
[2025-05-27 04:44:02] ID_LIKE="rhel fedora"
[2025-05-27 04:44:02] VERSION_ID="7"
[2025-05-27 04:44:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 04:44:02] ANSI_COLOR="0;31"
[2025-05-27 04:44:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 04:44:02] HOME_URL="https://www.centos.org/"
[2025-05-27 04:44:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 04:44:02] 
[2025-05-27 04:44:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 04:44:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 04:44:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 04:44:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 04:44:02] 
[2025-05-27 04:44:02] 2025-05-27 11:43:48,786 | INFO     | **************************************
[2025-05-27 04:44:02] 2025-05-27 11:43:49,290 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-27 04:44:02] 2025-05-27 11:43:49,412 | INFO     | sufficient remaining disk space (1891789438976 B)
[2025-05-27 04:44:02] 2025-05-27 11:43:49,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 04:44:02] 2025-05-27 11:43:49,413 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 04:44:02] 2025-05-27 11:43:49,413 | INFO     | update_server=False
[2025-05-27 04:44:02] 2025-05-27 11:43:49,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 04:44:02] 2025-05-27 11:43:49,421 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 04:44:02] 2025-05-27 11:43:49,489 | INFO     | all data control threads have been joined
[2025-05-27 04:44:02] 2025-05-27 11:43:49,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 04:44:02] 2025-05-27 11:43:49,671 | INFO     | aborting loop
[2025-05-27 04:44:02] 2025-05-27 11:43:49,792 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 04:44:02] 2025-05-27 11:43:49,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 04:44:02] 2025-05-27 11:43:49,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 04:44:02] 2025-05-27 11:43:50,166 | INFO     | all payload control threads have been joined
[2025-05-27 04:44:02] 2025-05-27 11:43:50,418 | INFO     | [job] retrieve thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:50,495 | INFO     | [data] control thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:50,497 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:50,561 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:50,563 | INFO     | [data] copytool_in thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:50,621 | INFO     | all job control threads have been joined
[2025-05-27 04:44:02] 2025-05-27 11:43:50,677 | INFO     | [job] job monitor thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:50,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:50,900 | INFO     | [payload] failed_post thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:51,172 | INFO     | [payload] control thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:51,224 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:51,428 | INFO     | [data] copytool_out thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:51,627 | INFO     | [job] control thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:51,805 | INFO     | [job] validate thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:51,864 | INFO     | [payload] validate_post thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:52,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 04:44:02] 2025-05-27 11:43:52,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 04:44:02] 2025-05-27 11:43:53,049 | INFO     | [job] queue monitor thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:56,089 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 04:44:02] 2025-05-27 11:43:56,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511009974080)>', '<ExcThread(monitor, started 140510610036480)>']
[2025-05-27 04:44:02] 2025-05-27 11:43:56,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 04:44:02] 2025-05-27 11:43:56,834 | INFO     | [monitor] control thread has ended
[2025-05-27 04:44:02] 2025-05-27 11:44:01,484 | INFO     | all workflow threads have been joined
[2025-05-27 04:44:02] 2025-05-27 11:44:01,488 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 04:44:02] 2025-05-27 11:44:01,489 | INFO     | traces error code: 0
[2025-05-27 04:44:02] 2025-05-27 11:44:01,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 04:44:02] 2025-05-27 11:44:01,704 [wrapper] ==== pilot stdout END ====
[2025-05-27 04:44:02] 2025-05-27 11:44:01,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 04:44:02] 2025-05-27 11:44:01,707 [wrapper] pilotpid: 2153281
[2025-05-27 04:44:02] 2025-05-27 11:44:01,709 [wrapper] Pilot exit status: 0
[2025-05-27 04:44:02] 2025-05-27 11:44:01,723 [wrapper] pandaids: 6666763208
[2025-05-27 04:44:02] 2025-05-27 11:44:01,766 [wrapper] cleanup supervisor_pilot 2153287 2153282
[2025-05-27 04:44:02] 2025-05-27 11:44:01,779 [wrapper] Test setup, not cleaning
[2025-05-27 04:44:02] 2025-05-27 11:44:01,781 [wrapper] apfmon messages muted
[2025-05-27 04:44:02] 2025-05-27 11:44:01,795 [wrapper] ==== wrapper stdout END ====
[2025-05-27 04:44:02] 2025-05-27 11:44:01,815 [wrapper] ==== wrapper stderr END ====
[2025-05-27 04:44:02]  *** Error codes and diagnostics ***
[2025-05-27 04:44:02]     "exeErrorCode": 65,
[2025-05-27 04:44:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 04:44:02]     "pilotErrorCode": 1305,
[2025-05-27 04:44:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 04:44:02]  *** Listing of results directory ***
[2025-05-27 04:44:02] total 220068
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc    495897 May 26 21:09 pilot3.tar.gz
[2025-05-27 04:44:02] -rwx------. 1 boinc boinc     37140 May 26 21:37 runpilot2-wrapper.sh
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc      5111 May 26 21:37 queuedata.json
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc       100 May 27 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 04:44:02] -rwxr-xr-x. 1 boinc boinc      7986 May 27 04:40 run_atlas
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc       105 May 27 04:40 job.xml
[2025-05-27 04:44:02] -rw-r--r--. 2 boinc boinc 221325124 May 27 04:40 EVNT.44871834._002454.pool.root.1
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc      6601 May 27 04:40 init_data.xml
[2025-05-27 04:44:02] -rw-r--r--. 2 boinc boinc     15093 May 27 04:40 start_atlas.sh
[2025-05-27 04:44:02] drwxrwx--x. 2 boinc boinc      4096 May 27 04:40 shared
[2025-05-27 04:44:02] -rw-r--r--. 2 boinc boinc    508871 May 27 04:40 input.tar.gz
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc         0 May 27 04:40 boinc_lockfile
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc      2559 May 27 04:40 pandaJob.out
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc    990747 May 27 04:40 agis_schedconf.cvmfs.json
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc   1603667 May 27 04:40 agis_ddmendpoints.agis.ALL.json
[2025-05-27 04:44:02] drwx------. 4 boinc boinc      4096 May 27 04:40 pilot3
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc       522 May 27 04:41 boinc_task_state.xml
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc       954 May 27 04:41 memory_monitor_summary.json
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc     20342 May 27 04:41 log.44871837._062199.job.log.tgz.1
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc        95 May 27 04:43 pilot_heartbeat.json
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc      8313 May 27 04:43 heartbeat.json
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc      4352 May 27 04:44 pilotlog.txt
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc     75822 May 27 04:44 log.44871837._062199.job.log.1
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc      8192 May 27 04:44 boinc_mmap_file
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc       188 May 27 04:44 output.list
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc        22 May 27 04:44 wrapper_checkpoint.txt
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc       620 May 27 04:44 runtime_log
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc    112640 May 27 04:44 result.tar.gz
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc      8484 May 27 04:44 runtime_log.err
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc       645 May 27 04:44 4tVMDmgF1d7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0JRKDmfed6zn.diag
[2025-05-27 04:44:02] -rw-r--r--. 1 boinc boinc     21466 May 27 04:44 stderr.txt
[2025-05-27 04:44:02] No HITS result produced
[2025-05-27 04:44:02]  *** Contents of shared directory: ***
[2025-05-27 04:44:02] total 216768
[2025-05-27 04:44:02] -rw-r--r--. 2 boinc boinc 221325124 May 27 04:40 ATLAS.root_0
[2025-05-27 04:44:02] -rw-r--r--. 2 boinc boinc     15093 May 27 04:40 start_atlas.sh
[2025-05-27 04:44:02] -rw-r--r--. 2 boinc boinc    508871 May 27 04:40 input.tar.gz
[2025-05-27 04:44:02] -rw-------. 1 boinc boinc    112640 May 27 04:44 result.tar.gz
04:44:04 (2149516): run_atlas exited; CPU time 20.663806
04:44:04 (2149516): called boinc_finish(0)

</stderr_txt>
]]>

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