Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:49:07 (20795): wrapper (7.7.26015): starting
04:49:07 (20795): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 04:49:07] Arguments: --nthreads 8
[2025-05-28 04:49:07] Threads: 8
[2025-05-28 04:49:07] Checking for CVMFS
[2025-05-28 04:49:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 04:49:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 04:49:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 04:49:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 04:49:09] 2.11.2.0 1855 22556 97064 146502 3 59 20332582 25165825 4632 130560 0 12659723 99.797 13983113 1781 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 04:49:09] CVMFS is ok
[2025-05-28 04:49:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 04:49:09] Checking for apptainer binary...
[2025-05-28 04:49:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 04:49:09] Running /usr/bin/apptainer --version
[2025-05-28 04:49:09] apptainer version 1.3.2-1.el7
[2025-05-28 04:49:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 04:49:18] cg-vwn348.simple-grid.lan
[2025-05-28 04:49:18] apptainer works
[2025-05-28 04:49:18] Set ATHENA_PROC_NUMBER=8
[2025-05-28 04:49:18] Set ATHENA_CORE_NUMBER=8
[2025-05-28 04:49:18] Starting ATLAS job with PandaID=6666763928
[2025-05-28 04:49:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 10:28:03]  *** The last 200 lines of the pilot log: ***
[2025-05-28 10:28:03] 2025-05-28 08:12:14,264 | INFO     | using path: /var/lib/boinc/slots/28/PanDA_Pilot-6666763928/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 10:28:03] 2025-05-28 08:12:14,265 | INFO     | extracted standard info from prmon json
[2025-05-28 10:28:03] 2025-05-28 08:12:14,265 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 10:28:03] 2025-05-28 08:12:14,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 10:28:03] 2025-05-28 08:12:14,265 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 10:28:03] 2025-05-28 08:12:14,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 10:28:03] 2025-05-28 08:12:14,273 | INFO     | fitting pss+swap vs Time
[2025-05-28 10:28:03] 2025-05-28 08:12:14,274 | INFO     | sum of square deviations: 8797783560.0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,277 | INFO     | sum of deviations: 126903814644.00002
[2025-05-28 10:28:03] 2025-05-28 08:12:14,277 | INFO     | mean x: 1748410520.0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,277 | INFO     | mean y: 2450774.629508197
[2025-05-28 10:28:03] 2025-05-28 08:12:14,277 | INFO     | -- intersect: -25217533672.419067
[2025-05-28 10:28:03] 2025-05-28 08:12:14,278 | INFO     | intersect: -25217533672.419067
[2025-05-28 10:28:03] 2025-05-28 08:12:14,278 | INFO     | chi2: 5.862336391281769
[2025-05-28 10:28:03] 2025-05-28 08:12:14,279 | INFO     | sum of square deviations: 8372156975.0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,282 | INFO     | sum of deviations: 144850205665.5
[2025-05-28 10:28:03] 2025-05-28 08:12:14,282 | INFO     | mean x: 1748410367.5
[2025-05-28 10:28:03] 2025-05-28 08:12:14,283 | INFO     | mean y: 2457108.21
[2025-05-28 10:28:03] 2025-05-28 08:12:14,283 | INFO     | -- intersect: -30247525312.84553
[2025-05-28 10:28:03] 2025-05-28 08:12:14,283 | INFO     | intersect: -30247525312.84553
[2025-05-28 10:28:03] 2025-05-28 08:12:14,283 | INFO     | chi2: 5.121826149188043
[2025-05-28 10:28:03] 2025-05-28 08:12:14,284 | INFO     | current chi2=5.121826149188043 (change=12.631657289318692 %)
[2025-05-28 10:28:03] 2025-05-28 08:12:14,284 | INFO     | right removable region: 299
[2025-05-28 10:28:03] 2025-05-28 08:12:14,284 | INFO     | sum of square deviations: 8372156975.0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,287 | INFO     | sum of deviations: 23422642536.5
[2025-05-28 10:28:03] 2025-05-28 08:12:14,288 | INFO     | mean x: 1748410672.5
[2025-05-28 10:28:03] 2025-05-28 08:12:14,288 | INFO     | mean y: 2487817.49
[2025-05-28 10:28:03] 2025-05-28 08:12:14,288 | INFO     | -- intersect: -4889011268.26013
[2025-05-28 10:28:03] 2025-05-28 08:12:14,288 | INFO     | intersect: -4889011268.26013
[2025-05-28 10:28:03] 2025-05-28 08:12:14,289 | INFO     | chi2: 1.4452541771407343
[2025-05-28 10:28:03] 2025-05-28 08:12:14,289 | INFO     | current chi2=1.4452541771407343 (change=75.34678870884895 %)
[2025-05-28 10:28:03] 2025-05-28 08:12:14,289 | INFO     | sum of square deviations: 7960484140.0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,292 | INFO     | sum of deviations: -8526682174.999998
[2025-05-28 10:28:03] 2025-05-28 08:12:14,293 | INFO     | mean x: 1748410825.0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,293 | INFO     | mean y: 2499569.311864407
[2025-05-28 10:28:03] 2025-05-28 08:12:14,293 | INFO     | -- intersect: 1875268003.230827
[2025-05-28 10:28:03] 2025-05-28 08:12:14,293 | INFO     | intersect: 1875268003.230827
[2025-05-28 10:28:03] 2025-05-28 08:12:14,294 | INFO     | chi2: 0.8239940362733074
[2025-05-28 10:28:03] 2025-05-28 08:12:14,294 | INFO     | current chi2=0.8239940362733074 (change=42.986220049992674 %)
[2025-05-28 10:28:03] 2025-05-28 08:12:14,294 | INFO     | sum of square deviations: 7562532492.5
[2025-05-28 10:28:03] 2025-05-28 08:12:14,297 | INFO     | sum of deviations: -4596106823.5
[2025-05-28 10:28:03] 2025-05-28 08:12:14,297 | INFO     | mean x: 1748410977.5
[2025-05-28 10:28:03] 2025-05-28 08:12:14,297 | INFO     | mean y: 2498042.7206896553
[2025-05-28 10:28:03] 2025-05-28 08:12:14,298 | INFO     | -- intersect: 1065089658.9470651
[2025-05-28 10:28:03] 2025-05-28 08:12:14,298 | INFO     | intersect: 1065089658.9470651
[2025-05-28 10:28:03] 2025-05-28 08:12:14,298 | INFO     | chi2: 0.8020811179653305
[2025-05-28 10:28:03] 2025-05-28 08:12:14,298 | INFO     | current chi2=0.8020811179653305 (change=2.6593539932743644 %)
[2025-05-28 10:28:03] 2025-05-28 08:12:14,299 | INFO     | left removable region: 30
[2025-05-28 10:28:03] 2025-05-28 08:12:14,299 | INFO     | sum of square deviations: 6035722470.0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,302 | INFO     | sum of deviations: 10092019035.0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,302 | INFO     | mean x: 1748411252.0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,302 | INFO     | mean y: 2507414.182156134
[2025-05-28 10:28:03] 2025-05-28 08:12:14,302 | INFO     | -- intersect: -2920920514.105637
[2025-05-28 10:28:03] 2025-05-28 08:12:14,302 | INFO     | intersect: -2920920514.105637
[2025-05-28 10:28:03] 2025-05-28 08:12:14,303 | INFO     | chi2: 0.0007979794377364517
[2025-05-28 10:28:03] 2025-05-28 08:12:14,303 | INFO     | -- intersect: -2920920514.105637
[2025-05-28 10:28:03] 2025-05-28 08:12:14,303 | INFO     | current memory leak: 1.67 B/s (using 269 data points, chi2=0.00)
[2025-05-28 10:28:03] 2025-05-28 08:12:14,304 | INFO     | ..............................
[2025-05-28 10:28:03] 2025-05-28 08:12:14,304 | INFO     | . Timing measurements:
[2025-05-28 10:28:03] 2025-05-28 08:12:14,304 | INFO     | . get job = 0 s
[2025-05-28 10:28:03] 2025-05-28 08:12:14,304 | INFO     | . initial setup = 6 s
[2025-05-28 10:28:03] 2025-05-28 08:12:14,304 | INFO     | . payload setup = 161 s
[2025-05-28 10:28:03] 2025-05-28 08:12:14,305 | INFO     | . stage-in = 0 s
[2025-05-28 10:28:03] 2025-05-28 08:12:14,305 | INFO     | . payload execution = 18740 s
[2025-05-28 10:28:03] 2025-05-28 08:12:14,305 | INFO     | . stage-out = 2 s
[2025-05-28 10:28:03] 2025-05-28 08:12:14,305 | INFO     | . log creation = 0 s
[2025-05-28 10:28:03] 2025-05-28 08:12:14,305 | INFO     | ..............................
[2025-05-28 10:28:03] 2025-05-28 08:12:14,441 | INFO     | 
[2025-05-28 10:28:03] 2025-05-28 08:12:14,441 | INFO     | job summary report
[2025-05-28 10:28:03] 2025-05-28 08:12:14,441 | INFO     | --------------------------------------------------
[2025-05-28 10:28:03] 2025-05-28 08:12:14,441 | INFO     | PanDA job id: 6666763928
[2025-05-28 10:28:03] 2025-05-28 08:12:14,441 | INFO     | task id: 44871837
[2025-05-28 10:28:03] 2025-05-28 08:12:14,441 | INFO     | errors: (none)
[2025-05-28 10:28:03] 2025-05-28 08:12:14,441 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | pilot state: finished 
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | transexitcode: 0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | exeerrorcode: 0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | exeerrordiag: 
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | exitcode: 0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | exitmsg: OK
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | cpuconsumptiontime: 71045 s
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | nevents: 400
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | neventsw: 0
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | pid: 6282
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | pgrp: 6282
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | corecount: 8
[2025-05-28 10:28:03] 2025-05-28 08:12:14,442 | INFO     | event service: False
[2025-05-28 10:28:03] 2025-05-28 08:12:14,443 | INFO     | sizes: {0: 2405064, 1: 2405263, 12: 2405263, 23: 2405291, 34: 2405319, 44: 2405347, 55: 2405503, 66: 2405531, 77: 2405559, 86: 2405821, 87: 2405849, 18906: 2437944
[2025-05-28 10:28:03] 2025-05-28 08:12:14,443 | INFO     | --------------------------------------------------
[2025-05-28 10:28:03] 2025-05-28 08:12:14,443 | INFO     | 
[2025-05-28 10:28:03] 2025-05-28 08:12:14,443 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-05-28 10:28:03] 2025-05-28 08:12:14,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,473 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 10:28:03] 2025-05-28 08:12:14,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 10:28:03] 2025-05-28 08:12:14,475 | INFO     | job 6666763928 has completed (purged errors)
[2025-05-28 10:28:03] 2025-05-28 08:12:14,475 | INFO     | overall cleanup function is called
[2025-05-28 10:28:03] 2025-05-28 08:12:15,485 | INFO     | --- collectZombieJob: --- 10, [6282]
[2025-05-28 10:28:03] 2025-05-28 08:12:15,485 | INFO     | zombie collector waiting for pid 6282
[2025-05-28 10:28:03] 2025-05-28 08:12:15,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 10:28:03] 2025-05-28 08:12:15,485 | INFO     | collected zombie processes
[2025-05-28 10:28:03] 2025-05-28 08:12:15,485 | INFO     | will attempt to kill all subprocesses of pid=6282
[2025-05-28 10:28:03] 2025-05-28 08:12:15,622 | INFO     | process IDs to be killed: [6282] (in reverse order)
[2025-05-28 10:28:03] 2025-05-28 08:12:15,685 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 10:28:03] 2025-05-28 08:12:15,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 10:28:03] 2025-05-28 08:12:15,688 | INFO     | did not find any defunct processes belonging to 6282
[2025-05-28 10:28:03] 2025-05-28 08:12:15,692 | INFO     | did not find any defunct processes belonging to 6282
[2025-05-28 10:28:03] 2025-05-28 08:12:15,692 | INFO     | ready for new job
[2025-05-28 10:28:03] 2025-05-28 08:12:15,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 10:28:03] 2025-05-28 08:12:15,694 | INFO     | **************************************
[2025-05-28 10:28:03] 2025-05-28 08:12:15,694 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 10:28:03] 2025-05-28 08:12:15,695 | INFO     | **************************************
[2025-05-28 10:28:03] 2025-05-28 08:12:15,695 | INFO     | 
[2025-05-28 10:28:03] 2025-05-28 08:12:15,695 | INFO     | pilot is running in a VM
[2025-05-28 10:28:03] 2025-05-28 08:12:15,695 | INFO     | architecture information:
[2025-05-28 10:28:03] 2025-05-28 08:12:15,696 | INFO     | executing command: cat /etc/os-release
[2025-05-28 10:28:03] 2025-05-28 08:12:15,725 | INFO     | cat /etc/os-release:
[2025-05-28 10:28:03] NAME="CentOS Linux"
[2025-05-28 10:28:03] VERSION="7 (Core)"
[2025-05-28 10:28:03] ID="centos"
[2025-05-28 10:28:03] ID_LIKE="rhel fedora"
[2025-05-28 10:28:03] VERSION_ID="7"
[2025-05-28 10:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 10:28:03] ANSI_COLOR="0;31"
[2025-05-28 10:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 10:28:03] HOME_URL="https://www.centos.org/"
[2025-05-28 10:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 10:28:03] 
[2025-05-28 10:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 10:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 10:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 10:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 10:28:03] 
[2025-05-28 10:28:03] 2025-05-28 08:12:15,726 | INFO     | **************************************
[2025-05-28 10:28:03] 2025-05-28 08:12:16,228 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-05-28 10:28:03] 2025-05-28 08:12:16,473 | INFO     | sufficient remaining disk space (494314455040 B)
[2025-05-28 10:28:03] 2025-05-28 08:12:16,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 10:28:03] 2025-05-28 08:12:16,474 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 10:28:03] 2025-05-28 08:12:16,474 | INFO     | update_server=False
[2025-05-28 10:28:03] 2025-05-28 08:12:16,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 10:28:03] 2025-05-28 08:12:16,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 10:28:03] 2025-05-28 08:12:16,474 | INFO     | aborting loop
[2025-05-28 10:28:03] 2025-05-28 08:12:16,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 10:28:03] 2025-05-28 08:12:16,814 | INFO     | all data control threads have been joined
[2025-05-28 10:28:03] 2025-05-28 08:12:16,899 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 10:28:03] 2025-05-28 08:12:17,283 | INFO     | all payload control threads have been joined
[2025-05-28 10:28:03] 2025-05-28 08:12:17,379 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 10:28:03] 2025-05-28 08:12:17,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 10:28:03] 2025-05-28 08:12:17,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 10:28:03] 2025-05-28 08:12:17,480 | INFO     | [job] retrieve thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:17,480 | INFO     | [job] job monitor thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:17,488 | INFO     | all job control threads have been joined
[2025-05-28 10:28:03] 2025-05-28 08:12:17,820 | INFO     | [data] control thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,006 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,032 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,289 | INFO     | [payload] control thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,302 | INFO     | [payload] validate_post thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,465 | INFO     | [payload] failed_post thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,494 | INFO     | [job] control thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,530 | INFO     | [job] validate thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,619 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,792 | INFO     | [data] copytool_in thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,905 | INFO     | [data] copytool_out thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:18,912 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:19,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 10:28:03] 2025-05-28 08:12:20,462 | INFO     | [job] queue monitor thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:20,492 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 10:28:03] 2025-05-28 08:12:20,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621928695616)>', '<ExcThread(monitor, started 140621490665216)>']
[2025-05-28 10:28:03] 2025-05-28 08:12:21,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 10:28:03] 2025-05-28 08:12:21,403 | INFO     | [monitor] control thread has ended
[2025-05-28 10:28:03] 2025-05-28 08:12:25,813 | INFO     | all workflow threads have been joined
[2025-05-28 10:28:03] 2025-05-28 08:12:25,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 10:28:03] 2025-05-28 08:12:25,813 | INFO     | traces error code: 0
[2025-05-28 10:28:03] 2025-05-28 08:12:25,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 10:28:03] 2025-05-28 08:12:26,157 [wrapper] ==== pilot stdout END ====
[2025-05-28 10:28:03] 2025-05-28 08:12:26,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 10:28:03] 2025-05-28 08:12:26,352 [wrapper] pilotpid: 30071
[2025-05-28 10:28:03] 2025-05-28 08:12:26,449 [wrapper] Pilot exit status: 0
[2025-05-28 10:28:03] 2025-05-28 08:12:26,856 [wrapper] pandaids: 6666763928
[2025-05-28 10:28:03] 2025-05-28 08:12:27,797 [wrapper] cleanup supervisor_pilot  8089 30072
[2025-05-28 10:28:03] 2025-05-28 08:12:27,836 [wrapper] Test setup, not cleaning
[2025-05-28 10:28:03] 2025-05-28 08:12:27,935 [wrapper] apfmon messages muted
[2025-05-28 10:28:03] 2025-05-28 08:12:28,019 [wrapper] ==== wrapper stdout END ====
[2025-05-28 10:28:03] 2025-05-28 08:12:28,087 [wrapper] ==== wrapper stderr END ====
[2025-05-28 10:28:03]  *** Error codes and diagnostics ***
[2025-05-28 10:28:03]     "exeErrorCode": 0,
[2025-05-28 10:28:03]     "exeErrorDiag": "",
[2025-05-28 10:28:03]     "pilotErrorCode": 0,
[2025-05-28 10:28:03]     "pilotErrorDiag": "",
[2025-05-28 10:28:03]  *** Listing of results directory ***
[2025-05-28 10:28:03] total 423304
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc    495897 May 27 06:09 pilot3.tar.gz
[2025-05-28 10:28:03] -rwx------. 1 boinc boinc     37140 May 27 07:15 runpilot2-wrapper.sh
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc      5111 May 27 07:15 queuedata.json
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc       100 May 28 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 10:28:03] -rwxr-xr-x. 1 boinc boinc      7986 May 28 04:49 run_atlas
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc       105 May 28 04:49 job.xml
[2025-05-28 10:28:03] -rw-r--r--. 2 boinc boinc 223201811 May 28 04:49 EVNT.44871834._002472.pool.root.1
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc      6372 May 28 04:49 init_data.xml
[2025-05-28 10:28:03] -rw-r--r--. 2 boinc boinc     15093 May 28 04:49 start_atlas.sh
[2025-05-28 10:28:03] drwxrwx--x. 2 boinc boinc        68 May 28 04:49 shared
[2025-05-28 10:28:03] -rw-r--r--. 2 boinc boinc    508879 May 28 04:49 input.tar.gz
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc         0 May 28 04:49 boinc_lockfile
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc      2559 May 28 04:49 pandaJob.out
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc    991161 May 28 04:52 agis_schedconf.cvmfs.json
[2025-05-28 10:28:03] drwx------. 4 boinc boinc      4096 May 28 04:52 pilot3
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc 202277941 May 28 10:09 HITS.44871837._062665.pool.root.1
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc       531 May 28 10:09 boinc_task_state.xml
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc      1016 May 28 10:10 memory_monitor_summary.json
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc   1603667 May 28 10:10 agis_ddmendpoints.agis.ALL.json
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc    445410 May 28 10:10 log.44871837._062665.job.log.tgz.1
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc        95 May 28 10:11 pilot_heartbeat.json
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc      7689 May 28 10:12 heartbeat.json
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc      4417 May 28 10:12 pilotlog.txt
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc   1632691 May 28 10:12 log.44871837._062665.job.log.1
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc       357 May 28 10:12 output.list
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc       620 May 28 10:12 runtime_log
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc   2099200 May 28 10:12 result.tar.gz
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc      8673 May 28 10:12 runtime_log.err
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc       656 May 28 10:12 G2BMDm2p1d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVMRKDmkIdx8n.diag
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc      8192 May 28 10:28 boinc_mmap_file
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc        28 May 28 10:28 wrapper_checkpoint.txt
[2025-05-28 10:28:03] -rw-r--r--. 1 boinc boinc     20502 May 28 10:28 stderr.txt
[2025-05-28 10:28:03] HITS file was successfully produced:
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc 202277941 May 28 10:09 shared/HITS.pool.root.1
[2025-05-28 10:28:03]  *** Contents of shared directory: ***
[2025-05-28 10:28:03] total 418080
[2025-05-28 10:28:03] -rw-r--r--. 2 boinc boinc 223201811 May 28 04:49 ATLAS.root_0
[2025-05-28 10:28:03] -rw-r--r--. 2 boinc boinc     15093 May 28 04:49 start_atlas.sh
[2025-05-28 10:28:03] -rw-r--r--. 2 boinc boinc    508879 May 28 04:49 input.tar.gz
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc 202277941 May 28 10:09 HITS.pool.root.1
[2025-05-28 10:28:03] -rw-------. 1 boinc boinc   2099200 May 28 10:12 result.tar.gz
10:28:05 (20795): run_atlas exited; CPU time 71321.654730
10:28:05 (20795): called boinc_finish(0)

</stderr_txt>
]]>

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