Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:14:40 (1076043): wrapper (7.7.26015): starting
13:14:40 (1076043): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 13:14:40] Arguments: --nthreads 4
[2025-06-03 13:14:40] Threads: 4
[2025-06-03 13:14:40] Checking for CVMFS
[2025-06-03 13:14:40] No cvmfs_config command found, will try listing directly
[2025-06-03 13:14:40] CVMFS is ok
[2025-06-03 13:14:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:14:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:14:40] Further information can be found at the LHC@home message board.
[2025-06-03 13:14:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:14:40] Checking for apptainer binary...
[2025-06-03 13:14:40] which: no apptainer in ((null))
[2025-06-03 13:14:40] apptainer is not installed, using version from CVMFS
[2025-06-03 13:14:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:14:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-06-03 13:14:40] apptainer works
[2025-06-03 13:14:40] Set ATHENA_PROC_NUMBER=4
[2025-06-03 13:14:40] Set ATHENA_CORE_NUMBER=4
[2025-06-03 13:14:40] Starting ATLAS job with PandaID=6666763556
[2025-06-03 13:14:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:06:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:06:36] 2025-06-03 15:04:52,386 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:06:36] 2025-06-03 15:04:52,386 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:06:36] 2025-06-03 15:04:52,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:06:36] 2025-06-03 15:04:52,391 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:06:36] 2025-06-03 15:04:52,391 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 17:06:36] 2025-06-03 15:04:52,393 | INFO     | sum of deviations: 20526776878.999996
[2025-06-03 17:06:36] 2025-06-03 15:04:52,393 | INFO     | mean x: 1748956182.5
[2025-06-03 17:06:36] 2025-06-03 15:04:52,393 | INFO     | mean y: 2356366.530973451
[2025-06-03 17:06:36] 2025-06-03 15:04:52,393 | INFO     | -- intersect: -10027724910.217892
[2025-06-03 17:06:36] 2025-06-03 15:04:52,393 | INFO     | intersect: -10027724910.217892
[2025-06-03 17:06:36] 2025-06-03 15:04:52,394 | INFO     | chi2: 1.7485681283660843
[2025-06-03 17:06:36] 2025-06-03 15:04:52,394 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,395 | INFO     | sum of deviations: 20741822314.000004
[2025-06-03 17:06:36] 2025-06-03 15:04:52,396 | INFO     | mean x: 1748956030.0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,396 | INFO     | mean y: 2356507.696832579
[2025-06-03 17:06:36] 2025-06-03 15:04:52,396 | INFO     | -- intersect: -10836399694.497288
[2025-06-03 17:06:36] 2025-06-03 15:04:52,396 | INFO     | intersect: -10836399694.497288
[2025-06-03 17:06:36] 2025-06-03 15:04:52,396 | INFO     | chi2: 1.7492779911918463
[2025-06-03 17:06:36] 2025-06-03 15:04:52,396 | INFO     | current chi2=1.7492779911918463 (change=-0.040596806852778305 %)
[2025-06-03 17:06:36] 2025-06-03 15:04:52,396 | INFO     | right removable region: 220
[2025-06-03 17:06:36] 2025-06-03 15:04:52,397 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,398 | INFO     | sum of deviations: -17429571114.0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,398 | INFO     | mean x: 1748956335.0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,398 | INFO     | mean y: 2381073.846153846
[2025-06-03 17:06:36] 2025-06-03 15:04:52,399 | INFO     | -- intersect: 9110303323.799902
[2025-06-03 17:06:36] 2025-06-03 15:04:52,399 | INFO     | intersect: 9110303323.799902
[2025-06-03 17:06:36] 2025-06-03 15:04:52,399 | INFO     | chi2: 0.07827169693456514
[2025-06-03 17:06:36] 2025-06-03 15:04:52,399 | INFO     | current chi2=0.07827169693456514 (change=95.52366901438924 %)
[2025-06-03 17:06:36] 2025-06-03 15:04:52,400 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,401 | INFO     | sum of deviations: -24019071042.999996
[2025-06-03 17:06:36] 2025-06-03 15:04:52,401 | INFO     | mean x: 1748956487.5
[2025-06-03 17:06:36] 2025-06-03 15:04:52,401 | INFO     | mean y: 2385585.037037037
[2025-06-03 17:06:36] 2025-06-03 15:04:52,401 | INFO     | -- intersect: 13445653148.827255
[2025-06-03 17:06:36] 2025-06-03 15:04:52,401 | INFO     | intersect: 13445653148.827255
[2025-06-03 17:06:36] 2025-06-03 15:04:52,402 | INFO     | chi2: 0.022112999973389034
[2025-06-03 17:06:36] 2025-06-03 15:04:52,402 | INFO     | current chi2=0.022112999973389034 (change=71.74840863374226 %)
[2025-06-03 17:06:36] 2025-06-03 15:04:52,402 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,403 | INFO     | sum of deviations: -24152165113.000004
[2025-06-03 17:06:36] 2025-06-03 15:04:52,403 | INFO     | mean x: 1748956640.0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,403 | INFO     | mean y: 2385678.1184834125
[2025-06-03 17:06:36] 2025-06-03 15:04:52,404 | INFO     | -- intersect: 14504091026.356646
[2025-06-03 17:06:36] 2025-06-03 15:04:52,404 | INFO     | intersect: 14504091026.356646
[2025-06-03 17:06:36] 2025-06-03 15:04:52,404 | INFO     | chi2: 0.019339763889892506
[2025-06-03 17:06:36] 2025-06-03 15:04:52,404 | INFO     | current chi2=0.019339763889892506 (change=12.541202400551091 %)
[2025-06-03 17:06:36] 2025-06-03 15:04:52,404 | INFO     | left removable region: 30
[2025-06-03 17:06:36] 2025-06-03 15:04:52,404 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 17:06:36] 2025-06-03 15:04:52,406 | INFO     | sum of deviations: -21109945571.49999
[2025-06-03 17:06:36] 2025-06-03 15:04:52,406 | INFO     | mean x: 1748956914.5
[2025-06-03 17:06:36] 2025-06-03 15:04:52,406 | INFO     | mean y: 2385276.247368421
[2025-06-03 17:06:36] 2025-06-03 15:04:52,406 | INFO     | -- intersect: 17361957857.276943
[2025-06-03 17:06:36] 2025-06-03 15:04:52,406 | INFO     | intersect: 17361957857.276943
[2025-06-03 17:06:36] 2025-06-03 15:04:52,406 | INFO     | chi2: 0.015132166344093007
[2025-06-03 17:06:36] 2025-06-03 15:04:52,406 | INFO     | -- intersect: 17361957857.276943
[2025-06-03 17:06:36] 2025-06-03 15:04:52,407 | INFO     | current memory leak: -9.93 B/s (using 190 data points, chi2=0.02)
[2025-06-03 17:06:36] 2025-06-03 15:04:52,407 | INFO     | ..............................
[2025-06-03 17:06:36] 2025-06-03 15:04:52,407 | INFO     | . Timing measurements:
[2025-06-03 17:06:36] 2025-06-03 15:04:52,407 | INFO     | . get job = 0 s
[2025-06-03 17:06:36] 2025-06-03 15:04:52,407 | INFO     | . initial setup = 1 s
[2025-06-03 17:06:36] 2025-06-03 15:04:52,408 | INFO     | . payload setup = 7 s
[2025-06-03 17:06:36] 2025-06-03 15:04:52,408 | INFO     | . stage-in = 0 s
[2025-06-03 17:06:36] 2025-06-03 15:04:52,408 | INFO     | . payload execution = 13764 s
[2025-06-03 17:06:36] 2025-06-03 15:04:52,408 | INFO     | . stage-out = 1 s
[2025-06-03 17:06:36] 2025-06-03 15:04:52,408 | INFO     | . log creation = 0 s
[2025-06-03 17:06:36] 2025-06-03 15:04:52,408 | INFO     | ..............................
[2025-06-03 17:06:36] 2025-06-03 15:04:52,510 | INFO     | 
[2025-06-03 17:06:36] 2025-06-03 15:04:52,511 | INFO     | job summary report
[2025-06-03 17:06:36] 2025-06-03 15:04:52,511 | INFO     | --------------------------------------------------
[2025-06-03 17:06:36] 2025-06-03 15:04:52,511 | INFO     | PanDA job id: 6666763556
[2025-06-03 17:06:36] 2025-06-03 15:04:52,511 | INFO     | task id: 44871837
[2025-06-03 17:06:36] 2025-06-03 15:04:52,511 | INFO     | errors: (none)
[2025-06-03 17:06:36] 2025-06-03 15:04:52,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:06:36] 2025-06-03 15:04:52,511 | INFO     | pilot state: finished 
[2025-06-03 17:06:36] 2025-06-03 15:04:52,511 | INFO     | transexitcode: 0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | exeerrorcode: 0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | exeerrordiag: 
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | exitcode: 0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | exitmsg: OK
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | cpuconsumptiontime: 52678 s
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | nevents: 400
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | neventsw: 0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | pid: 1087080
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | pgrp: 1087080
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | corecount: 4
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | event service: False
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | sizes: {0: 2405244, 4: 2405450, 11: 2405478, 13774: 2435588, 13775: 2435587, 13776: 2444606, 13778: 2444790, 13785: 2444960}
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | --------------------------------------------------
[2025-06-03 17:06:36] 2025-06-03 15:04:52,512 | INFO     | 
[2025-06-03 17:06:36] 2025-06-03 15:04:52,513 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-03 17:06:36] 2025-06-03 15:04:52,537 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,537 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,537 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,537 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,539 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:06:36] 2025-06-03 15:04:52,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,539 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:06:36] 2025-06-03 15:04:52,539 | INFO     | job 6666763556 has completed (purged errors)
[2025-06-03 17:06:36] 2025-06-03 15:04:52,539 | INFO     | overall cleanup function is called
[2025-06-03 17:06:36] 2025-06-03 15:04:52,721 | INFO     | 13803s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 17:06:36] 2025-06-03 15:04:53,547 | INFO     | --- collectZombieJob: --- 10, [1087080]
[2025-06-03 17:06:36] 2025-06-03 15:04:53,548 | INFO     | zombie collector waiting for pid 1087080
[2025-06-03 17:06:36] 2025-06-03 15:04:53,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:06:36] 2025-06-03 15:04:53,548 | INFO     | collected zombie processes
[2025-06-03 17:06:36] 2025-06-03 15:04:53,548 | INFO     | will attempt to kill all subprocesses of pid=1087080
[2025-06-03 17:06:36] 2025-06-03 15:04:53,936 | INFO     | process IDs to be killed: [1087080] (in reverse order)
[2025-06-03 17:06:36] 2025-06-03 15:04:54,059 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:06:36] 2025-06-03 15:04:54,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:06:36] 2025-06-03 15:04:54,072 | INFO     | did not find any defunct processes belonging to 1087080
[2025-06-03 17:06:36] 2025-06-03 15:04:54,085 | INFO     | did not find any defunct processes belonging to 1087080
[2025-06-03 17:06:36] 2025-06-03 15:04:54,085 | INFO     | ready for new job
[2025-06-03 17:06:36] 2025-06-03 15:04:54,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:06:36] 2025-06-03 15:04:54,088 | INFO     | **************************************
[2025-06-03 17:06:36] 2025-06-03 15:04:54,088 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:06:36] 2025-06-03 15:04:54,088 | INFO     | **************************************
[2025-06-03 17:06:36] 2025-06-03 15:04:54,088 | INFO     | 
[2025-06-03 17:06:36] 2025-06-03 15:04:54,092 | INFO     | architecture information:
[2025-06-03 17:06:36] 2025-06-03 15:04:54,093 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:06:36] 2025-06-03 15:04:54,111 | INFO     | cat /etc/os-release:
[2025-06-03 17:06:36] NAME="CentOS Linux"
[2025-06-03 17:06:36] VERSION="7 (Core)"
[2025-06-03 17:06:36] ID="centos"
[2025-06-03 17:06:36] ID_LIKE="rhel fedora"
[2025-06-03 17:06:36] VERSION_ID="7"
[2025-06-03 17:06:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:06:36] ANSI_COLOR="0;31"
[2025-06-03 17:06:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:06:36] HOME_URL="https://www.centos.org/"
[2025-06-03 17:06:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:06:36] 
[2025-06-03 17:06:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:06:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:06:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:06:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:06:36] 
[2025-06-03 17:06:36] 2025-06-03 15:04:54,111 | INFO     | **************************************
[2025-06-03 17:06:36] 2025-06-03 15:04:54,614 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-03 17:06:36] 2025-06-03 15:04:54,636 | INFO     | sufficient remaining disk space (649289793536 B)
[2025-06-03 17:06:36] 2025-06-03 15:04:54,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:06:36] 2025-06-03 15:04:54,636 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:06:36] 2025-06-03 15:04:54,636 | INFO     | update_server=False
[2025-06-03 17:06:36] 2025-06-03 15:04:54,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:06:36] 2025-06-03 15:04:54,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:06:36] 2025-06-03 15:04:54,637 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:06:36] 2025-06-03 15:04:54,638 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:06:36] 2025-06-03 15:04:54,638 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:06:36] 2025-06-03 15:04:54,638 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:06:36] 2025-06-03 15:04:54,782 | INFO     | all data control threads have been joined
[2025-06-03 17:06:36] 2025-06-03 15:04:54,812 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 17:06:36] 2025-06-03 15:04:54,812 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 17:06:36] 2025-06-03 15:04:54,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:06:36] 2025-06-03 15:04:54,813 | INFO     | will abort loop
[2025-06-03 17:06:36] 2025-06-03 15:04:55,287 | INFO     | all job control threads have been joined
[2025-06-03 17:06:36] 2025-06-03 15:04:55,642 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:55,778 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:55,788 | INFO     | [data] control thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:55,818 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:55,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:55,934 | INFO     | all payload control threads have been joined
[2025-06-03 17:06:36] 2025-06-03 15:04:56,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:06:36] 2025-06-03 15:04:56,163 | INFO     | [job] validate thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:56,293 | INFO     | [job] control thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:56,387 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:56,642 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:56,687 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:56,817 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:56,881 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:56,939 | INFO     | [payload] control thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:57,044 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:04:57,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:06:36] 2025-06-03 15:04:58,526 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:05:00,048 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:06:36] 2025-06-03 15:05:01,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23298797360960)>', '<ExcThread(monitor, started 23298555471616)>']
[2025-06-03 17:06:36] 2025-06-03 15:05:01,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:06:36] 2025-06-03 15:05:01,673 | INFO     | [monitor] control thread has ended
[2025-06-03 17:06:36] 2025-06-03 15:05:06,132 | INFO     | all workflow threads have been joined
[2025-06-03 17:06:36] 2025-06-03 15:05:06,133 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:06:36] 2025-06-03 15:05:06,133 | INFO     | traces error code: 0
[2025-06-03 17:06:36] 2025-06-03 15:05:06,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:06:36] 2025-06-03 15:05:06,335 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:06:36] 2025-06-03 15:05:06,338 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:06:36] 2025-06-03 15:05:06,342 [wrapper] pilotpid: 1079736
[2025-06-03 17:06:36] 2025-06-03 15:05:06,345 [wrapper] Pilot exit status: 0
[2025-06-03 17:06:36] 2025-06-03 15:05:06,358 [wrapper] pandaids: 6666763556
[2025-06-03 17:06:36] 2025-06-03 15:05:06,446 [wrapper] cleanup supervisor_pilot 1496637 1079737
[2025-06-03 17:06:36] 2025-06-03 15:05:06,449 [wrapper] Test setup, not cleaning
[2025-06-03 17:06:36] 2025-06-03 15:05:06,453 [wrapper] apfmon messages muted
[2025-06-03 17:06:36] 2025-06-03 15:05:06,456 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:06:36] 2025-06-03 15:05:06,459 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:06:36]  *** Error codes and diagnostics ***
[2025-06-03 17:06:36]     "exeErrorCode": 0,
[2025-06-03 17:06:36]     "exeErrorDiag": "",
[2025-06-03 17:06:36]     "pilotErrorCode": 0,
[2025-06-03 17:06:36]     "pilotErrorDiag": "",
[2025-06-03 17:06:36]  *** Listing of results directory ***
[2025-06-03 17:06:36] total 415836
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc    495897 May 27 06:09 pilot3.tar.gz
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc      5111 May 27 06:45 queuedata.json
[2025-06-03 17:06:36] -rwx------ 1 boinc boinc     37140 May 27 06:47 runpilot2-wrapper.sh
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc       100 Jun  3 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:06:36] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 12:25 run_atlas
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc       105 Jun  3 12:25 job.xml
[2025-06-03 17:06:36] -rw-r--r-- 2 boinc boinc 224495734 Jun  3 13:14 EVNT.44871834._002461.pool.root.1
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc      6633 Jun  3 13:14 init_data.xml
[2025-06-03 17:06:36] -rw-r--r-- 2 boinc boinc     15093 Jun  3 13:14 start_atlas.sh
[2025-06-03 17:06:36] drwxrwx--x 2 boinc boinc      4096 Jun  3 13:14 shared
[2025-06-03 17:06:36] -rw-r--r-- 2 boinc boinc    508880 Jun  3 13:14 input.tar.gz
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc         0 Jun  3 13:14 boinc_lockfile
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc      2558 Jun  3 13:14 pandaJob.out
[2025-06-03 17:06:36] -rw------- 1 boinc boinc    985490 Jun  3 13:14 agis_schedconf.cvmfs.json
[2025-06-03 17:06:36] drwx------ 4 boinc boinc      4096 Jun  3 13:14 pilot3
[2025-06-03 17:06:36] -rw------- 1 boinc boinc        95 Jun  3 17:04 pilot_heartbeat.json
[2025-06-03 17:06:36] -rw------- 1 boinc boinc 194258139 Jun  3 17:04 HITS.44871837._062375.pool.root.1
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc       529 Jun  3 17:04 boinc_task_state.xml
[2025-06-03 17:06:36] -rw------- 1 boinc boinc      1038 Jun  3 17:04 memory_monitor_summary.json
[2025-06-03 17:06:36] -rw------- 1 boinc boinc   1603667 Jun  3 17:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:06:36] -rw------- 1 boinc boinc    328112 Jun  3 17:04 log.44871837._062375.job.log.tgz.1
[2025-06-03 17:06:36] -rw------- 1 boinc boinc      7733 Jun  3 17:04 heartbeat.json
[2025-06-03 17:06:36] -rw------- 1 boinc boinc      4672 Jun  3 17:05 pilotlog.txt
[2025-06-03 17:06:36] -rw------- 1 boinc boinc   1283456 Jun  3 17:05 log.44871837._062375.job.log.1
[2025-06-03 17:06:36] -rw------- 1 boinc boinc       357 Jun  3 17:05 output.list
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc       620 Jun  3 17:05 runtime_log
[2025-06-03 17:06:36] -rw------- 1 boinc boinc   1628160 Jun  3 17:05 result.tar.gz
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc      9026 Jun  3 17:05 runtime_log.err
[2025-06-03 17:06:36] -rw------- 1 boinc boinc       665 Jun  3 17:05 p52NDmdO1d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2aYKDmqecFQm.diag
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc        27 Jun  3 17:06 wrapper_checkpoint.txt
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc      8192 Jun  3 17:06 boinc_mmap_file
[2025-06-03 17:06:36] -rw-r--r-- 1 boinc boinc     20674 Jun  3 17:06 stderr.txt
[2025-06-03 17:06:36] HITS file was successfully produced:
[2025-06-03 17:06:36] -rw------- 1 boinc boinc 194258139 Jun  3 17:04 shared/HITS.pool.root.1
[2025-06-03 17:06:36]  *** Contents of shared directory: ***
[2025-06-03 17:06:36] total 411060
[2025-06-03 17:06:36] -rw-r--r-- 2 boinc boinc 224495734 Jun  3 13:14 ATLAS.root_0
[2025-06-03 17:06:36] -rw-r--r-- 2 boinc boinc     15093 Jun  3 13:14 start_atlas.sh
[2025-06-03 17:06:36] -rw-r--r-- 2 boinc boinc    508880 Jun  3 13:14 input.tar.gz
[2025-06-03 17:06:36] -rw------- 1 boinc boinc 194258139 Jun  3 17:04 HITS.pool.root.1
[2025-06-03 17:06:36] -rw------- 1 boinc boinc   1628160 Jun  3 17:05 result.tar.gz
17:06:38 (1076043): run_atlas exited; CPU time 53292.882193
17:06:38 (1076043): called boinc_finish(0)

</stderr_txt>
]]>

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