Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:52:08 (2135765): wrapper (7.7.26015): starting
00:52:08 (2135765): wrapper: running run_atlas (--nthreads 2)
[2025-05-28 00:52:09] Arguments: --nthreads 2
[2025-05-28 00:52:09] Threads: 2
[2025-05-28 00:52:09] Checking for CVMFS
[2025-05-28 00:52:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 00:52:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 00:52:09] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 00:52:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 00:52:09] 2.9.2.0 1067246 5412 60520 146497 3 56 28685070 36864001 0 130560 0 2832780 99.987 1256587 6643 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-28 00:52:09] CVMFS is ok
[2025-05-28 00:52:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 00:52:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 00:52:09] Further information can be found at the LHC@home message board.
[2025-05-28 00:52:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 00:52:09] Checking for apptainer binary...
[2025-05-28 00:52:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 00:52:09] Running /usr/bin/apptainer --version
[2025-05-28 00:52:09] apptainer version 1.3.6-6.1
[2025-05-28 00:52:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 00:52:09] thA354a
[2025-05-28 00:52:09] apptainer works
[2025-05-28 00:52:09] Set ATHENA_PROC_NUMBER=2
[2025-05-28 00:52:09] Set ATHENA_CORE_NUMBER=2
[2025-05-28 00:52:09] Starting ATLAS job with PandaID=6666344465
[2025-05-28 00:52:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:12:41 (2662): wrapper (7.7.26015): starting
01:12:41 (2662): wrapper: running run_atlas (--nthreads 2)
[2025-05-28 01:12:41] Arguments: --nthreads 2
[2025-05-28 01:12:41] Threads: 2
[2025-05-28 01:12:41] This job has been restarted, cleaning up previous attempt
[2025-05-28 01:12:41] Checking for CVMFS
[2025-05-28 01:12:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 01:12:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 01:12:45] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 01:12:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 01:12:45] 2.9.2.0 2863 0 28696 146497 3 1 28686134 36864001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-28 01:12:45] CVMFS is ok
[2025-05-28 01:12:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 01:12:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 01:12:45] Further information can be found at the LHC@home message board.
[2025-05-28 01:12:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 01:12:45] Checking for apptainer binary...
[2025-05-28 01:12:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 01:12:45] Running /usr/bin/apptainer --version
[2025-05-28 01:12:45] apptainer version 1.3.6-6.1
[2025-05-28 01:12:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 01:12:46] thA354a
[2025-05-28 01:12:46] apptainer works
[2025-05-28 01:12:46] Set ATHENA_PROC_NUMBER=2
[2025-05-28 01:12:46] Set ATHENA_CORE_NUMBER=2
[2025-05-28 01:12:46] Starting ATLAS job with PandaID=6666344465
[2025-05-28 01:12:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 03:58:32]  *** The last 200 lines of the pilot log: ***
[2025-05-28 03:58:32] 2025-05-28 01:57:52,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 03:58:32] 2025-05-28 01:57:55,083 | INFO     | monitor loop #763: job 0:6666344465 is in state 'finished'
[2025-05-28 03:58:32] 2025-05-28 01:57:55,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 03:58:32] 2025-05-28 01:57:57,587 | INFO     | monitor loop #764: job 0:6666344465 is in state 'finished'
[2025-05-28 03:58:32] 2025-05-28 01:57:57,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 03:58:32] 2025-05-28 01:57:58,052 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-28 03:58:32] 2025-05-28 01:57:58,052 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6666344465/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 03:58:32] 2025-05-28 01:57:58,052 | INFO     | extracted standard info from prmon json
[2025-05-28 03:58:32] 2025-05-28 01:57:58,052 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 03:58:32] 2025-05-28 01:57:58,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 03:58:32] 2025-05-28 01:57:58,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 03:58:32] 2025-05-28 01:57:58,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 03:58:32] 2025-05-28 01:57:58,053 | INFO     | fitting pss+swap vs Time
[2025-05-28 03:58:32] 2025-05-28 01:57:58,053 | INFO     | sum of square deviations: 1318277740.5
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | sum of deviations: 4606666777.500001
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | mean x: 1748392529.5
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | mean y: 2326064.4135802467
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | -- intersect: -6107358967.984826
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | intersect: -6107358967.984826
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | chi2: 1.499465951820468
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | sum of square deviations: 1199940638.0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | sum of deviations: 4796747322.000006
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | mean x: 1748392377.0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,054 | INFO     | mean y: 2326309.299363057
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | -- intersect: -6986849810.411298
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | intersect: -6986849810.411298
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | chi2: 1.5007436590316452
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | current chi2=1.5007436590316452 (change=-0.08521081853348604 %)
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | right removable region: 156
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | sum of square deviations: 1199940638.0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | sum of deviations: -17933346507.0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | mean x: 1748392682.0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | mean y: 2354684.687898089
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | -- intersect: 26132423792.83078
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | intersect: 26132423792.83078
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | chi2: 0.035736182142233695
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | current chi2=0.035736182142233695 (change=97.61673933983981 %)
[2025-05-28 03:58:32] 2025-05-28 01:57:58,055 | INFO     | sum of square deviations: 1088905998.0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | sum of deviations: -16936926116.5
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | mean x: 1748392834.5
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | mean y: 2353313.1907894737
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | -- intersect: 27196987482.65425
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | intersect: 27196987482.65425
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | chi2: 0.034947728754800074
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | current chi2=0.034947728754800074 (change=2.2063167920274624 %)
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | left removable region: 20
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | sum of square deviations: 779958810.0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | sum of deviations: -13862800433.499998
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | mean x: 1748392956.5
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | mean y: 2351270.595588235
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | -- intersect: 31077867470.35047
[2025-05-28 03:58:32] 2025-05-28 01:57:58,056 | INFO     | intersect: 31077867470.35047
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | chi2: 0.03224515177971771
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | -- intersect: 31077867470.35047
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | current memory leak: -17.77 B/s (using 136 data points, chi2=0.03)
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | ..............................
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | . Timing measurements:
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | . get job = 0 s
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | . initial setup = 1 s
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | . payload setup = 12 s
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | . stage-in = 0 s
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | . payload execution = 9847 s
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | . stage-out = 0 s
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | . log creation = 0 s
[2025-05-28 03:58:32] 2025-05-28 01:57:58,057 | INFO     | ..............................
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | 
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | job summary report
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | --------------------------------------------------
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | PanDA job id: 6666344465
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | task id: 44871837
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | errors: (none)
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | pilot state: finished 
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | transexitcode: 0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | exeerrorcode: 0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | exeerrordiag: 
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | exitcode: 0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | exitmsg: OK
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | cpuconsumptiontime: 19212 s
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | nevents: 400
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | neventsw: 0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | pid: 13307
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | pgrp: 13307
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | corecount: 2
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | event service: False
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | sizes: {0: 2405237, 7: 2405443, 10: 2405471, 9863: 2433891, 9864: 2442894, 9874: 2443008}
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | --------------------------------------------------
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | 
[2025-05-28 03:58:32] 2025-05-28 01:57:58,087 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | job 6666344465 has completed (purged errors)
[2025-05-28 03:58:32] 2025-05-28 01:57:58,098 | INFO     | overall cleanup function is called
[2025-05-28 03:58:32] 2025-05-28 01:57:59,104 | INFO     | --- collectZombieJob: --- 10, [13307]
[2025-05-28 03:58:32] 2025-05-28 01:57:59,105 | INFO     | zombie collector waiting for pid 13307
[2025-05-28 03:58:32] 2025-05-28 01:57:59,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 03:58:32] 2025-05-28 01:57:59,105 | INFO     | collected zombie processes
[2025-05-28 03:58:32] 2025-05-28 01:57:59,105 | INFO     | will attempt to kill all subprocesses of pid=13307
[2025-05-28 03:58:32] 2025-05-28 01:57:59,139 | INFO     | process IDs to be killed: [13307] (in reverse order)
[2025-05-28 03:58:32] 2025-05-28 01:57:59,160 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 03:58:32] 2025-05-28 01:57:59,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 03:58:32] 2025-05-28 01:57:59,161 | INFO     | did not find any defunct processes belonging to 13307
[2025-05-28 03:58:32] 2025-05-28 01:57:59,161 | INFO     | did not find any defunct processes belonging to 13307
[2025-05-28 03:58:32] 2025-05-28 01:57:59,161 | INFO     | ready for new job
[2025-05-28 03:58:32] 2025-05-28 01:57:59,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 03:58:32] 2025-05-28 01:57:59,162 | INFO     | **************************************
[2025-05-28 03:58:32] 2025-05-28 01:57:59,162 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 03:58:32] 2025-05-28 01:57:59,162 | INFO     | **************************************
[2025-05-28 03:58:32] 2025-05-28 01:57:59,162 | INFO     | 
[2025-05-28 03:58:32] 2025-05-28 01:57:59,162 | INFO     | architecture information:
[2025-05-28 03:58:32] 2025-05-28 01:57:59,162 | INFO     | executing command: cat /etc/os-release
[2025-05-28 03:58:32] 2025-05-28 01:57:59,170 | INFO     | cat /etc/os-release:
[2025-05-28 03:58:32] NAME="CentOS Linux"
[2025-05-28 03:58:32] VERSION="7 (Core)"
[2025-05-28 03:58:32] ID="centos"
[2025-05-28 03:58:32] ID_LIKE="rhel fedora"
[2025-05-28 03:58:32] VERSION_ID="7"
[2025-05-28 03:58:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 03:58:32] ANSI_COLOR="0;31"
[2025-05-28 03:58:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 03:58:32] HOME_URL="https://www.centos.org/"
[2025-05-28 03:58:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 03:58:32] 
[2025-05-28 03:58:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 03:58:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 03:58:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 03:58:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 03:58:32] 
[2025-05-28 03:58:32] 2025-05-28 01:57:59,170 | INFO     | **************************************
[2025-05-28 03:58:32] 2025-05-28 01:57:59,673 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-28 03:58:32] 2025-05-28 01:57:59,706 | INFO     | sufficient remaining disk space (195531112448 B)
[2025-05-28 03:58:32] 2025-05-28 01:57:59,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 03:58:32] 2025-05-28 01:57:59,707 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 03:58:32] 2025-05-28 01:57:59,707 | INFO     | update_server=False
[2025-05-28 03:58:32] 2025-05-28 01:57:59,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 03:58:32] 2025-05-28 01:57:59,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 03:58:32] 2025-05-28 01:57:59,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 03:58:32] 2025-05-28 01:57:59,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 03:58:32] 2025-05-28 01:58:00,091 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 03:58:32] 2025-05-28 01:58:00,092 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 03:58:32] 2025-05-28 01:58:00,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 03:58:32] 2025-05-28 01:58:00,092 | INFO     | will abort loop
[2025-05-28 03:58:32] 2025-05-28 01:58:00,359 | INFO     | all data control threads have been joined
[2025-05-28 03:58:32] 2025-05-28 01:58:00,415 | INFO     | all payload control threads have been joined
[2025-05-28 03:58:32] 2025-05-28 01:58:00,598 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 03:58:32] 2025-05-28 01:58:00,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 03:58:32] 2025-05-28 01:58:00,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 03:58:32] 2025-05-28 01:58:00,713 | INFO     | [job] retrieve thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:00,714 | INFO     | [job] queue monitor thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:00,757 | INFO     | [payload] validate_post thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,024 | INFO     | all job control threads have been joined
[2025-05-28 03:58:32] 2025-05-28 01:58:01,098 | INFO     | [job] job monitor thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,105 | INFO     | [payload] failed_post thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,324 | INFO     | [job] validate thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,365 | INFO     | [data] control thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,421 | INFO     | [payload] control thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,427 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,445 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,548 | INFO     | [data] copytool_in thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,714 | INFO     | [data] copytool_out thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:01,824 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:02,025 | INFO     | [job] control thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:02,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:03,716 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 03:58:32] 2025-05-28 01:58:04,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540396799808)>', '<ExcThread(monitor, started 140539248768768)>']
[2025-05-28 03:58:32] 2025-05-28 01:58:04,928 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-05-28 03:58:32] 2025-05-28 01:58:05,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 03:58:32] 2025-05-28 01:58:05,626 | INFO     | [monitor] control thread has ended
[2025-05-28 03:58:32] 2025-05-28 01:58:09,729 | INFO     | all workflow threads have been joined
[2025-05-28 03:58:32] 2025-05-28 01:58:09,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 03:58:32] 2025-05-28 01:58:09,729 | INFO     | traces error code: 0
[2025-05-28 03:58:32] 2025-05-28 01:58:09,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 03:58:32] 2025-05-28 01:58:09,770 [wrapper] ==== pilot stdout END ====
[2025-05-28 03:58:32] 2025-05-28 01:58:09,773 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 03:58:32] 2025-05-28 01:58:09,775 [wrapper] pilotpid: 6843
[2025-05-28 03:58:32] 2025-05-28 01:58:09,777 [wrapper] Pilot exit status: 0
[2025-05-28 03:58:32] 2025-05-28 01:58:09,901 [wrapper] pandaids: 6666344465 6666344465
[2025-05-28 03:58:32] 2025-05-28 01:58:09,957 [wrapper] cleanup supervisor_pilot   35299 6844
[2025-05-28 03:58:32] 2025-05-28 01:58:09,964 [wrapper] Test setup, not cleaning
[2025-05-28 03:58:32] 2025-05-28 01:58:09,972 [wrapper] apfmon messages muted
[2025-05-28 03:58:32] 2025-05-28 01:58:09,979 [wrapper] ==== wrapper stdout END ====
[2025-05-28 03:58:32] 2025-05-28 01:58:09,986 [wrapper] ==== wrapper stderr END ====
[2025-05-28 03:58:32]  *** Error codes and diagnostics ***
[2025-05-28 03:58:32]     "exeErrorCode": 0,
[2025-05-28 03:58:32]     "exeErrorDiag": "",
[2025-05-28 03:58:32]     "pilotErrorCode": 0,
[2025-05-28 03:58:32]     "pilotErrorDiag": "",
[2025-05-28 03:58:32]  *** Listing of results directory ***
[2025-05-28 03:58:32] total 640184
[2025-05-28 03:58:32] drwx------ 4 boinc boinc      4096 Apr  3 10:00 pilot3
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc    495897 May 26 23:09 pilot3.tar.gz
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc      5111 May 26 23:54 queuedata.json
[2025-05-28 03:58:32] -rwx------ 1 boinc boinc     37140 May 26 23:54 runpilot2-wrapper.sh
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc       100 May 28 00:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 03:58:32] -rwxr-xr-x 1 boinc boinc      7986 May 28 00:52 run_atlas
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc       105 May 28 00:52 job.xml
[2025-05-28 03:58:32] -rw-r--r-- 3 boinc boinc 224236178 May 28 00:52 EVNT.44871834._002279.pool.root.1
[2025-05-28 03:58:32] -rw-r--r-- 3 boinc boinc 224236178 May 28 00:52 ATLAS.root_0
[2025-05-28 03:58:32] drwxrwx--x 2 boinc boinc      4096 May 28 00:52 shared
[2025-05-28 03:58:32] -rw-r--r-- 2 boinc boinc    508880 May 28 00:52 input.tar.gz
[2025-05-28 03:58:32] -rw-r--r-- 2 boinc boinc     15093 May 28 00:52 start_atlas.sh
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc         0 May 28 00:52 boinc_lockfile
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc      2559 May 28 01:12 pandaJob.out
[2025-05-28 03:58:32] -rw------- 1 boinc boinc    991177 May 28 01:13 agis_schedconf.cvmfs.json
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc      6696 May 28 01:53 init_data.xml
[2025-05-28 03:58:32] -rw------- 1 boinc boinc 200873303 May 28 03:57 HITS.44871837._057539.pool.root.1
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc       531 May 28 03:57 boinc_task_state.xml
[2025-05-28 03:58:32] -rw------- 1 boinc boinc      1028 May 28 03:57 memory_monitor_summary.json
[2025-05-28 03:58:32] -rw------- 1 boinc boinc   1603667 May 28 03:57 agis_ddmendpoints.agis.ALL.json
[2025-05-28 03:58:32] -rw------- 1 boinc boinc    263171 May 28 03:57 log.44871837._057539.job.log.tgz.1
[2025-05-28 03:58:32] -rw------- 1 boinc boinc        97 May 28 03:57 pilot_heartbeat.json
[2025-05-28 03:58:32] -rw------- 1 boinc boinc      7686 May 28 03:57 heartbeat.json
[2025-05-28 03:58:32] -rw------- 1 boinc boinc      4543 May 28 03:58 pilotlog.txt
[2025-05-28 03:58:32] -rw------- 1 boinc boinc    913537 May 28 03:58 log.44871837._057539.job.log.1
[2025-05-28 03:58:32] -rw------- 1 boinc boinc       357 May 28 03:58 output.list
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc       620 May 28 03:58 runtime_log
[2025-05-28 03:58:32] -rw------- 1 boinc boinc   1198080 May 28 03:58 result.tar.gz
[2025-05-28 03:58:32] -rw------- 1 boinc boinc       790 May 28 03:58 uo0LDmdxud7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFtQKDm3YLaSn.diag
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc      8823 May 28 03:58 runtime_log.err
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc        28 May 28 03:58 wrapper_checkpoint.txt
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc      8192 May 28 03:58 boinc_mmap_file
[2025-05-28 03:58:32] -rw-r--r-- 1 boinc boinc     23105 May 28 03:58 stderr.txt
[2025-05-28 03:58:32] HITS file was successfully produced:
[2025-05-28 03:58:32] -rw------- 1 boinc boinc 200873303 May 28 03:57 shared/HITS.pool.root.1
[2025-05-28 03:58:32]  *** Contents of shared directory: ***
[2025-05-28 03:58:32] total 416844
[2025-05-28 03:58:32] -rw-r--r-- 3 boinc boinc 224236178 May 28 00:52 ATLAS.root_0
[2025-05-28 03:58:32] -rw-r--r-- 2 boinc boinc    508880 May 28 00:52 input.tar.gz
[2025-05-28 03:58:32] -rw-r--r-- 2 boinc boinc     15093 May 28 00:52 start_atlas.sh
[2025-05-28 03:58:32] -rw------- 1 boinc boinc 200873303 May 28 03:57 HITS.pool.root.1
[2025-05-28 03:58:32] -rw------- 1 boinc boinc   1198080 May 28 03:58 result.tar.gz
03:58:34 (2662): run_atlas exited; CPU time 19251.291261
03:58:34 (2662): called boinc_finish(0)

</stderr_txt>
]]>

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