Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:15 (641925): wrapper (7.7.26015): starting
11:46:15 (641925): wrapper: running run_atlas (--nthreads 4)
[2025-05-28 11:46:15] Arguments: --nthreads 4
[2025-05-28 11:46:15] Threads: 4
[2025-05-28 11:46:15] Checking for CVMFS
[2025-05-28 11:46:15] No cvmfs_config command found, will try listing directly
[2025-05-28 11:46:15] CVMFS is ok
[2025-05-28 11:46:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 11:46:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 11:46:15] Further information can be found at the LHC@home message board.
[2025-05-28 11:46:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 11:46:15] Checking for apptainer binary...
[2025-05-28 11:46:15] which: no apptainer in ((null))
[2025-05-28 11:46:15] apptainer is not installed, using version from CVMFS
[2025-05-28 11:46:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 11:46:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-05-28 11:46:15] apptainer works
[2025-05-28 11:46:15] Set ATHENA_PROC_NUMBER=4
[2025-05-28 11:46:15] Set ATHENA_CORE_NUMBER=4
[2025-05-28 11:46:15] Starting ATLAS job with PandaID=6666762800
[2025-05-28 11:46:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 15:51:17]  *** The last 200 lines of the pilot log: ***
[2025-05-28 15:51:17] 2025-05-28 13:51:04,246 | INFO     | intersect: 3575194279.9103885
[2025-05-28 15:51:17] 2025-05-28 13:51:04,247 | INFO     | chi2: 0.03913927891228218
[2025-05-28 15:51:17] 2025-05-28 13:51:04,247 | INFO     | current chi2=0.03913927891228218 (change=97.37139645410477 %)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,247 | INFO     | sum of square deviations: 3772726201.495652
[2025-05-28 15:51:17] 2025-05-28 13:51:04,249 | INFO     | sum of deviations: -3536563253.5478253
[2025-05-28 15:51:17] 2025-05-28 13:51:04,249 | INFO     | mean x: 1748433209.5043478
[2025-05-28 15:51:17] 2025-05-28 13:51:04,249 | INFO     | mean y: 2331081.047826087
[2025-05-28 15:51:17] 2025-05-28 13:51:04,249 | INFO     | -- intersect: 1641316872.692184
[2025-05-28 15:51:17] 2025-05-28 13:51:04,250 | INFO     | intersect: 1641316872.692184
[2025-05-28 15:51:17] 2025-05-28 13:51:04,250 | INFO     | chi2: 0.0237234663776002
[2025-05-28 15:51:17] 2025-05-28 13:51:04,250 | INFO     | current chi2=0.0237234663776002 (change=39.38706323443376 %)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,250 | INFO     | sum of square deviations: 3531986498.9955525
[2025-05-28 15:51:17] 2025-05-28 13:51:04,252 | INFO     | sum of deviations: -111258735.09777689
[2025-05-28 15:51:17] 2025-05-28 13:51:04,252 | INFO     | mean x: 1748433362.0044444
[2025-05-28 15:51:17] 2025-05-28 13:51:04,252 | INFO     | mean y: 2328910.097777778
[2025-05-28 15:51:17] 2025-05-28 13:51:04,252 | INFO     | -- intersect: 57405135.42159741
[2025-05-28 15:51:17] 2025-05-28 13:51:04,253 | INFO     | intersect: 57405135.42159741
[2025-05-28 15:51:17] 2025-05-28 13:51:04,253 | INFO     | chi2: 0.015464926568574119
[2025-05-28 15:51:17] 2025-05-28 13:51:04,253 | INFO     | current chi2=0.015464926568574119 (change=34.811690996488736 %)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,253 | INFO     | sum of square deviations: 3301712108.995469
[2025-05-28 15:51:17] 2025-05-28 13:51:04,255 | INFO     | sum of deviations: 3621904942.927273
[2025-05-28 15:51:17] 2025-05-28 13:51:04,255 | INFO     | mean x: 1748433514.5045455
[2025-05-28 15:51:17] 2025-05-28 13:51:04,255 | INFO     | mean y: 2326436.0727272728
[2025-05-28 15:51:17] 2025-05-28 13:51:04,255 | INFO     | -- intersect: -1915666344.4942012
[2025-05-28 15:51:17] 2025-05-28 13:51:04,255 | INFO     | intersect: -1915666344.4942012
[2025-05-28 15:51:17] 2025-05-28 13:51:04,256 | INFO     | chi2: 0.003555178357021793
[2025-05-28 15:51:17] 2025-05-28 13:51:04,256 | INFO     | current chi2=0.003555178357021793 (change=77.01134666719867 %)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,256 | INFO     | sum of square deviations: 3081670468.9953523
[2025-05-28 15:51:17] 2025-05-28 13:51:04,258 | INFO     | sum of deviations: 4055041465.2976737
[2025-05-28 15:51:17] 2025-05-28 13:51:04,258 | INFO     | mean x: 1748433667.004651
[2025-05-28 15:51:17] 2025-05-28 13:51:04,258 | INFO     | mean y: 2326147.7023255816
[2025-05-28 15:51:17] 2025-05-28 13:51:04,258 | INFO     | -- intersect: -2298364692.0089397
[2025-05-28 15:51:17] 2025-05-28 13:51:04,258 | INFO     | intersect: -2298364692.0089397
[2025-05-28 15:51:17] 2025-05-28 13:51:04,259 | INFO     | chi2: 0.0002734974496619673
[2025-05-28 15:51:17] 2025-05-28 13:51:04,259 | INFO     | current chi2=0.0002734974496619673 (change=92.30706810751742 %)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,259 | INFO     | sum of square deviations: 2871629016.495233
[2025-05-28 15:51:17] 2025-05-28 13:51:04,260 | INFO     | sum of deviations: 3734288989.3809514
[2025-05-28 15:51:17] 2025-05-28 13:51:04,261 | INFO     | mean x: 1748433819.504762
[2025-05-28 15:51:17] 2025-05-28 13:51:04,261 | INFO     | mean y: 2326380.119047619
[2025-05-28 15:51:17] 2025-05-28 13:51:04,261 | INFO     | -- intersect: -2271350729.0524645
[2025-05-28 15:51:17] 2025-05-28 13:51:04,261 | INFO     | intersect: -2271350729.0524645
[2025-05-28 15:51:17] 2025-05-28 13:51:04,261 | INFO     | chi2: 0.00026355337734014955
[2025-05-28 15:51:17] 2025-05-28 13:51:04,261 | INFO     | current chi2=0.00026355337734014955 (change=3.6358921569865705 %)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,261 | INFO     | left removable region: 60
[2025-05-28 15:51:17] 2025-05-28 13:51:04,262 | INFO     | sum of square deviations: 1633472487.5
[2025-05-28 15:51:17] 2025-05-28 13:51:04,263 | INFO     | sum of deviations: 2076290702.5
[2025-05-28 15:51:17] 2025-05-28 13:51:04,263 | INFO     | mean x: 1748434551.5
[2025-05-28 15:51:17] 2025-05-28 13:51:04,263 | INFO     | mean y: 2327140.5
[2025-05-28 15:51:17] 2025-05-28 13:51:04,263 | INFO     | -- intersect: -2220090703.0752244
[2025-05-28 15:51:17] 2025-05-28 13:51:04,263 | INFO     | intersect: -2220090703.0752244
[2025-05-28 15:51:17] 2025-05-28 13:51:04,264 | INFO     | chi2: 0.00024094801841026645
[2025-05-28 15:51:17] 2025-05-28 13:51:04,264 | INFO     | -- intersect: -2220090703.0752244
[2025-05-28 15:51:17] 2025-05-28 13:51:04,264 | INFO     | current memory leak: 1.27 B/s (using 174 data points, chi2=0.00)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,265 | INFO     | ..............................
[2025-05-28 15:51:17] 2025-05-28 13:51:04,265 | INFO     | . Timing measurements:
[2025-05-28 15:51:17] 2025-05-28 13:51:04,265 | INFO     | . get job = 0 s
[2025-05-28 15:51:17] 2025-05-28 13:51:04,265 | INFO     | . initial setup = 1 s
[2025-05-28 15:51:17] 2025-05-28 13:51:04,265 | INFO     | . payload setup = 7 s
[2025-05-28 15:51:17] 2025-05-28 13:51:04,265 | INFO     | . stage-in = 0 s
[2025-05-28 15:51:17] 2025-05-28 13:51:04,265 | INFO     | . payload execution = 14641 s
[2025-05-28 15:51:17] 2025-05-28 13:51:04,265 | INFO     | . stage-out = 1 s
[2025-05-28 15:51:17] 2025-05-28 13:51:04,266 | INFO     | . log creation = 0 s
[2025-05-28 15:51:17] 2025-05-28 13:51:04,266 | INFO     | ..............................
[2025-05-28 15:51:17] 2025-05-28 13:51:04,379 | INFO     | 
[2025-05-28 15:51:17] 2025-05-28 13:51:04,380 | INFO     | job summary report
[2025-05-28 15:51:17] 2025-05-28 13:51:04,380 | INFO     | --------------------------------------------------
[2025-05-28 15:51:17] 2025-05-28 13:51:04,380 | INFO     | PanDA job id: 6666762800
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | task id: 44871837
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | errors: (none)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | pilot state: finished 
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | transexitcode: 0
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | exeerrorcode: 0
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | exeerrordiag: 
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | exitcode: 0
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | exitmsg: OK
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | cpuconsumptiontime: 56238 s
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | nevents: 400
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | neventsw: 0
[2025-05-28 15:51:17] 2025-05-28 13:51:04,381 | INFO     | pid: 652543
[2025-05-28 15:51:17] 2025-05-28 13:51:04,382 | INFO     | pgrp: 652543
[2025-05-28 15:51:17] 2025-05-28 13:51:04,382 | INFO     | corecount: 4
[2025-05-28 15:51:17] 2025-05-28 13:51:04,382 | INFO     | event service: False
[2025-05-28 15:51:17] 2025-05-28 13:51:04,382 | INFO     | sizes: {0: 2405245, 1: 2405245, 5: 2405479, 11: 2405535, 14652: 2436003, 14654: 2444966, 14655: 2445150, 14663: 2445320}
[2025-05-28 15:51:17] 2025-05-28 13:51:04,382 | INFO     | --------------------------------------------------
[2025-05-28 15:51:17] 2025-05-28 13:51:04,382 | INFO     | 
[2025-05-28 15:51:17] 2025-05-28 13:51:04,382 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-05-28 15:51:17] 2025-05-28 13:51:04,403 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,406 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 15:51:17] 2025-05-28 13:51:04,406 | INFO     | job 6666762800 has completed (purged errors)
[2025-05-28 15:51:17] 2025-05-28 13:51:04,406 | INFO     | overall cleanup function is called
[2025-05-28 15:51:17] 2025-05-28 13:51:05,414 | INFO     | --- collectZombieJob: --- 10, [652543]
[2025-05-28 15:51:17] 2025-05-28 13:51:05,414 | INFO     | zombie collector waiting for pid 652543
[2025-05-28 15:51:17] 2025-05-28 13:51:05,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 15:51:17] 2025-05-28 13:51:05,414 | INFO     | collected zombie processes
[2025-05-28 15:51:17] 2025-05-28 13:51:05,414 | INFO     | will attempt to kill all subprocesses of pid=652543
[2025-05-28 15:51:17] 2025-05-28 13:51:05,735 | INFO     | process IDs to be killed: [652543] (in reverse order)
[2025-05-28 15:51:17] 2025-05-28 13:51:05,846 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 15:51:17] 2025-05-28 13:51:05,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 15:51:17] 2025-05-28 13:51:05,855 | INFO     | did not find any defunct processes belonging to 652543
[2025-05-28 15:51:17] 2025-05-28 13:51:05,864 | INFO     | did not find any defunct processes belonging to 652543
[2025-05-28 15:51:17] 2025-05-28 13:51:05,864 | INFO     | ready for new job
[2025-05-28 15:51:17] 2025-05-28 13:51:05,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 15:51:17] 2025-05-28 13:51:05,866 | INFO     | **************************************
[2025-05-28 15:51:17] 2025-05-28 13:51:05,866 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 15:51:17] 2025-05-28 13:51:05,866 | INFO     | **************************************
[2025-05-28 15:51:17] 2025-05-28 13:51:05,867 | INFO     | 
[2025-05-28 15:51:17] 2025-05-28 13:51:05,870 | INFO     | architecture information:
[2025-05-28 15:51:17] 2025-05-28 13:51:05,870 | INFO     | executing command: cat /etc/os-release
[2025-05-28 15:51:17] 2025-05-28 13:51:05,891 | INFO     | cat /etc/os-release:
[2025-05-28 15:51:17] NAME="CentOS Linux"
[2025-05-28 15:51:17] VERSION="7 (Core)"
[2025-05-28 15:51:17] ID="centos"
[2025-05-28 15:51:17] ID_LIKE="rhel fedora"
[2025-05-28 15:51:17] VERSION_ID="7"
[2025-05-28 15:51:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 15:51:17] ANSI_COLOR="0;31"
[2025-05-28 15:51:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 15:51:17] HOME_URL="https://www.centos.org/"
[2025-05-28 15:51:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 15:51:17] 
[2025-05-28 15:51:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 15:51:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 15:51:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 15:51:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 15:51:17] 
[2025-05-28 15:51:17] 2025-05-28 13:51:05,892 | INFO     | **************************************
[2025-05-28 15:51:17] 2025-05-28 13:51:06,316 | INFO     | PID=645617 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-28 15:51:17] 2025-05-28 13:51:06,316 | INFO     | .. there are 16 such processes running
[2025-05-28 15:51:17] 2025-05-28 13:51:06,394 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-05-28 15:51:17] 2025-05-28 13:51:06,414 | INFO     | sufficient remaining disk space (672871219200 B)
[2025-05-28 15:51:17] 2025-05-28 13:51:06,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 15:51:17] 2025-05-28 13:51:06,414 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 15:51:17] 2025-05-28 13:51:06,415 | INFO     | update_server=False
[2025-05-28 15:51:17] 2025-05-28 13:51:06,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 15:51:17] 2025-05-28 13:51:06,415 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 15:51:17] 2025-05-28 13:51:06,415 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 15:51:17] 2025-05-28 13:51:06,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 15:51:17] 2025-05-28 13:51:06,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 15:51:17] 2025-05-28 13:51:06,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 15:51:17] 2025-05-28 13:51:06,780 | INFO     | all data control threads have been joined
[2025-05-28 15:51:17] 2025-05-28 13:51:06,837 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 15:51:17] 2025-05-28 13:51:06,837 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 15:51:17] 2025-05-28 13:51:06,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 15:51:17] 2025-05-28 13:51:06,837 | INFO     | will abort loop
[2025-05-28 15:51:17] 2025-05-28 13:51:07,420 | INFO     | [job] retrieve thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:07,649 | INFO     | all payload control threads have been joined
[2025-05-28 15:51:17] 2025-05-28 13:51:07,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 15:51:17] 2025-05-28 13:51:07,770 | INFO     | all job control threads have been joined
[2025-05-28 15:51:17] 2025-05-28 13:51:07,785 | INFO     | [data] control thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:07,820 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:07,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:07,842 | INFO     | [job] job monitor thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:07,848 | INFO     | [job] validate thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:07,874 | INFO     | [payload] validate_post thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:08,102 | INFO     | [payload] failed_post thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:08,122 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:08,223 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:08,456 | INFO     | [data] copytool_in thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:08,642 | INFO     | [data] copytool_out thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:08,654 | INFO     | [payload] control thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:08,775 | INFO     | [job] control thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:09,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 15:51:17] 2025-05-28 13:51:10,395 | INFO     | [job] queue monitor thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:11,710 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 15:51:17] 2025-05-28 13:51:11,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22528727271232)>', '<ExcThread(monitor, started 22528479147776)>']
[2025-05-28 15:51:17] 2025-05-28 13:51:12,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 15:51:17] 2025-05-28 13:51:12,447 | INFO     | [monitor] control thread has ended
[2025-05-28 15:51:17] 2025-05-28 13:51:16,895 | INFO     | all workflow threads have been joined
[2025-05-28 15:51:17] 2025-05-28 13:51:16,895 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 15:51:17] 2025-05-28 13:51:16,896 | INFO     | traces error code: 0
[2025-05-28 15:51:17] 2025-05-28 13:51:16,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 15:51:17] 2025-05-28 13:51:17,025 [wrapper] ==== pilot stdout END ====
[2025-05-28 15:51:17] 2025-05-28 13:51:17,027 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 15:51:17] 2025-05-28 13:51:17,029 [wrapper] pilotpid: 645617
[2025-05-28 15:51:17] 2025-05-28 13:51:17,032 [wrapper] Pilot exit status: 0
[2025-05-28 15:51:17] 2025-05-28 13:51:17,042 [wrapper] pandaids: 6666762800
[2025-05-28 15:51:17] 2025-05-28 13:51:17,096 [wrapper] cleanup supervisor_pilot 1287105 645618
[2025-05-28 15:51:17] 2025-05-28 13:51:17,099 [wrapper] Test setup, not cleaning
[2025-05-28 15:51:17] 2025-05-28 13:51:17,102 [wrapper] apfmon messages muted
[2025-05-28 15:51:17] 2025-05-28 13:51:17,104 [wrapper] ==== wrapper stdout END ====
[2025-05-28 15:51:17] 2025-05-28 13:51:17,106 [wrapper] ==== wrapper stderr END ====
[2025-05-28 15:51:17]  *** Error codes and diagnostics ***
[2025-05-28 15:51:17]     "exeErrorCode": 0,
[2025-05-28 15:51:17]     "exeErrorDiag": "",
[2025-05-28 15:51:17]     "pilotErrorCode": 0,
[2025-05-28 15:51:17]     "pilotErrorDiag": "",
[2025-05-28 15:51:17]  *** Listing of results directory ***
[2025-05-28 15:51:17] total 409840
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc      5111 May 27 06:09 queuedata.json
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc    495897 May 27 06:09 pilot3.tar.gz
[2025-05-28 15:51:17] -rwx------ 1 boinc boinc     37140 May 27 06:10 runpilot2-wrapper.sh
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc       100 May 28 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 15:51:17] -rwxr-xr-x 1 boinc boinc      7986 May 28 11:46 run_atlas
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc       105 May 28 11:46 job.xml
[2025-05-28 15:51:17] -rw-r--r-- 2 boinc boinc 221940816 May 28 11:46 EVNT.44871834._002440.pool.root.1
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc      6635 May 28 11:46 init_data.xml
[2025-05-28 15:51:17] -rw-r--r-- 2 boinc boinc     15093 May 28 11:46 start_atlas.sh
[2025-05-28 15:51:17] drwxrwx--x 2 boinc boinc      4096 May 28 11:46 shared
[2025-05-28 15:51:17] -rw-r--r-- 2 boinc boinc    508877 May 28 11:46 input.tar.gz
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc         0 May 28 11:46 boinc_lockfile
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc      2559 May 28 11:46 pandaJob.out
[2025-05-28 15:51:17] -rw------- 1 boinc boinc    991351 May 28 11:46 agis_schedconf.cvmfs.json
[2025-05-28 15:51:17] drwx------ 4 boinc boinc      4096 May 28 11:46 pilot3
[2025-05-28 15:51:17] -rw------- 1 boinc boinc 190464645 May 28 15:50 HITS.44871837._061856.pool.root.1
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc       530 May 28 15:50 boinc_task_state.xml
[2025-05-28 15:51:17] -rw------- 1 boinc boinc        95 May 28 15:50 pilot_heartbeat.json
[2025-05-28 15:51:17] -rw------- 1 boinc boinc      1033 May 28 15:50 memory_monitor_summary.json
[2025-05-28 15:51:17] -rw------- 1 boinc boinc   1603667 May 28 15:50 agis_ddmendpoints.agis.ALL.json
[2025-05-28 15:51:17] -rw------- 1 boinc boinc    345389 May 28 15:50 log.44871837._061856.job.log.tgz.1
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc      8192 May 28 15:50 boinc_mmap_file
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc        28 May 28 15:50 wrapper_checkpoint.txt
[2025-05-28 15:51:17] -rw------- 1 boinc boinc      7725 May 28 15:51 heartbeat.json
[2025-05-28 15:51:17] -rw------- 1 boinc boinc      5067 May 28 15:51 pilotlog.txt
[2025-05-28 15:51:17] -rw------- 1 boinc boinc   1365560 May 28 15:51 log.44871837._061856.job.log.1
[2025-05-28 15:51:17] -rw------- 1 boinc boinc       357 May 28 15:51 output.list
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc       620 May 28 15:51 runtime_log
[2025-05-28 15:51:17] -rw------- 1 boinc boinc   1730560 May 28 15:51 result.tar.gz
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc      9026 May 28 15:51 runtime_log.err
[2025-05-28 15:51:17] -rw------- 1 boinc boinc       666 May 28 15:51 KJtNDmOp0d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5VYKDmdKP1In.diag
[2025-05-28 15:51:17] -rw-r--r-- 1 boinc boinc     20842 May 28 15:51 stderr.txt
[2025-05-28 15:51:17] HITS file was successfully produced:
[2025-05-28 15:51:17] -rw------- 1 boinc boinc 190464645 May 28 15:50 shared/HITS.pool.root.1
[2025-05-28 15:51:17]  *** Contents of shared directory: ***
[2025-05-28 15:51:17] total 404960
[2025-05-28 15:51:17] -rw-r--r-- 2 boinc boinc 221940816 May 28 11:46 ATLAS.root_0
[2025-05-28 15:51:17] -rw-r--r-- 2 boinc boinc     15093 May 28 11:46 start_atlas.sh
[2025-05-28 15:51:17] -rw-r--r-- 2 boinc boinc    508877 May 28 11:46 input.tar.gz
[2025-05-28 15:51:17] -rw------- 1 boinc boinc 190464645 May 28 15:50 HITS.pool.root.1
[2025-05-28 15:51:17] -rw------- 1 boinc boinc   1730560 May 28 15:51 result.tar.gz
15:51:18 (641925): run_atlas exited; CPU time 56707.324207
15:51:18 (641925): called boinc_finish(0)

</stderr_txt>
]]>

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