Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:27:15 (2718706): wrapper (7.7.26015): starting
06:27:15 (2718706): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 06:27:15] Arguments: --nthreads 8
[2025-05-27 06:27:15] Threads: 8
[2025-05-27 06:27:15] Checking for CVMFS
[2025-05-27 06:27:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 06:27:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 06:27:16] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 06:27:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 06:27:17] 2.12.6.0 1699072 11652 312292 146477 3 109 26279805 32935937 25733 16776704 0 57953203 99.566 61600314 28443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-27 06:27:17] CVMFS is ok
[2025-05-27 06:27:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 06:27:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 06:27:17] Further information can be found at the LHC@home message board.
[2025-05-27 06:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 06:27:17] Checking for apptainer binary...
[2025-05-27 06:27:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 06:27:17] Running /usr/bin/apptainer --version
[2025-05-27 06:27:17] apptainer version 1.4.1-1.el9
[2025-05-27 06:27:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 06:27:18] c6-2-11-3.aglt2.org
[2025-05-27 06:27:18] apptainer works
[2025-05-27 06:27:18] Set ATHENA_PROC_NUMBER=8
[2025-05-27 06:27:18] Set ATHENA_CORE_NUMBER=8
[2025-05-27 06:27:18] Starting ATLAS job with PandaID=6666594354
[2025-05-27 06:27:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 09:53:12]  *** The last 200 lines of the pilot log: ***
[2025-05-27 09:53:12] 2025-05-27 13:52:48,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 09:53:12] 2025-05-27 13:52:51,150 | INFO     | monitor loop #765: job 0:6666594354 is in state 'finished'
[2025-05-27 09:53:12] 2025-05-27 13:52:51,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 09:53:12] 2025-05-27 13:52:53,665 | INFO     | monitor loop #766: job 0:6666594354 is in state 'finished'
[2025-05-27 09:53:12] 2025-05-27 13:52:53,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-27 09:53:12] 2025-05-27 13:52:54,397 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-27 09:53:12] 2025-05-27 13:52:54,397 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6666594354/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 09:53:12] 2025-05-27 13:52:54,398 | INFO     | extracted standard info from prmon json
[2025-05-27 09:53:12] 2025-05-27 13:52:54,398 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 09:53:12] 2025-05-27 13:52:54,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 09:53:12] 2025-05-27 13:52:54,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 09:53:12] 2025-05-27 13:52:54,399 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 09:53:12] 2025-05-27 13:52:54,403 | INFO     | fitting pss+swap vs Time
[2025-05-27 09:53:12] 2025-05-27 13:52:54,404 | INFO     | sum of square deviations: 2443592180.1507707
[2025-05-27 09:53:12] 2025-05-27 13:52:54,405 | INFO     | sum of deviations: -9855526381.432156
[2025-05-27 09:53:12] 2025-05-27 13:52:54,405 | INFO     | mean x: 1748347892.0653267
[2025-05-27 09:53:12] 2025-05-27 13:52:54,405 | INFO     | mean y: 2174290.879396985
[2025-05-27 09:53:12] 2025-05-27 13:52:54,405 | INFO     | -- intersect: 7053632760.151457
[2025-05-27 09:53:12] 2025-05-27 13:52:54,405 | INFO     | intersect: 7053632760.151457
[2025-05-27 09:53:12] 2025-05-27 13:52:54,406 | INFO     | chi2: 3.736625139556598
[2025-05-27 09:53:12] 2025-05-27 13:52:54,410 | INFO     | sum of square deviations: 2263992777.628863
[2025-05-27 09:53:12] 2025-05-27 13:52:54,412 | INFO     | sum of deviations: 2286474545.1546426
[2025-05-27 09:53:12] 2025-05-27 13:52:54,412 | INFO     | mean x: 1748347739.5670104
[2025-05-27 09:53:12] 2025-05-27 13:52:54,412 | INFO     | mean y: 2184395.680412371
[2025-05-27 09:53:12] 2025-05-27 13:52:54,412 | INFO     | -- intersect: -1763524683.4737034
[2025-05-27 09:53:12] 2025-05-27 13:52:54,412 | INFO     | intersect: -1763524683.4737034
[2025-05-27 09:53:12] 2025-05-27 13:52:54,412 | INFO     | chi2: 2.988151866140742
[2025-05-27 09:53:12] 2025-05-27 13:52:54,412 | INFO     | current chi2=2.988151866140742 (change=20.030729480792193 %)
[2025-05-27 09:53:12] 2025-05-27 13:52:54,412 | INFO     | right removable region: 193
[2025-05-27 09:53:12] 2025-05-27 13:52:54,413 | INFO     | sum of square deviations: 2263984847.628863
[2025-05-27 09:53:12] 2025-05-27 13:52:54,414 | INFO     | sum of deviations: -49564732655.85569
[2025-05-27 09:53:12] 2025-05-27 13:52:54,424 | INFO     | mean x: 1748348044.5670104
[2025-05-27 09:53:12] 2025-05-27 13:52:54,424 | INFO     | mean y: 2207815.8350515463
[2025-05-27 09:53:12] 2025-05-27 13:52:54,424 | INFO     | -- intersect: 38278260550.51202
[2025-05-27 09:53:12] 2025-05-27 13:52:54,424 | INFO     | intersect: 38278260550.51202
[2025-05-27 09:53:12] 2025-05-27 13:52:54,425 | INFO     | chi2: 1.4063049229632871
[2025-05-27 09:53:12] 2025-05-27 13:52:54,425 | INFO     | current chi2=1.4063049229632871 (change=62.3643028015873 %)
[2025-05-27 09:53:12] 2025-05-27 13:52:54,425 | INFO     | sum of square deviations: 2093400940.1058202
[2025-05-27 09:53:12] 2025-05-27 13:52:54,426 | INFO     | sum of deviations: -55783563846.50266
[2025-05-27 09:53:12] 2025-05-27 13:52:54,426 | INFO     | mean x: 1748348197.068783
[2025-05-27 09:53:12] 2025-05-27 13:52:54,427 | INFO     | mean y: 2213274.4232804235
[2025-05-27 09:53:12] 2025-05-27 13:52:54,427 | INFO     | -- intersect: 46591039814.347466
[2025-05-27 09:53:12] 2025-05-27 13:52:54,427 | INFO     | intersect: 46591039814.347466
[2025-05-27 09:53:12] 2025-05-27 13:52:54,427 | INFO     | chi2: 1.2259598620891197
[2025-05-27 09:53:12] 2025-05-27 13:52:54,427 | INFO     | current chi2=1.2259598620891197 (change=12.824036802356806 %)
[2025-05-27 09:53:12] 2025-05-27 13:52:54,427 | INFO     | left removable region: 20
[2025-05-27 09:53:12] 2025-05-27 13:52:54,427 | INFO     | sum of square deviations: 1605470480.023122
[2025-05-27 09:53:12] 2025-05-27 13:52:54,447 | INFO     | sum of deviations: -26719083742.04047
[2025-05-27 09:53:12] 2025-05-27 13:52:54,447 | INFO     | mean x: 1748348319.0751445
[2025-05-27 09:53:12] 2025-05-27 13:52:54,485 | INFO     | mean y: 2208150.61849711
[2025-05-27 09:53:12] 2025-05-27 13:52:54,485 | INFO     | -- intersect: 29099140002.61474
[2025-05-27 09:53:12] 2025-05-27 13:52:54,486 | INFO     | intersect: 29099140002.61474
[2025-05-27 09:53:12] 2025-05-27 13:52:54,486 | INFO     | chi2: 0.35596632060712574
[2025-05-27 09:53:12] 2025-05-27 13:52:54,486 | INFO     | -- intersect: 29099140002.61474
[2025-05-27 09:53:12] 2025-05-27 13:52:54,486 | INFO     | current memory leak: -16.64 B/s (using 173 data points, chi2=0.36)
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | ..............................
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | . Timing measurements:
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | . get job = 0 s
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | . initial setup = 6 s
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | . payload setup = 49 s
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | . stage-in = 0 s
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | . payload execution = 12107 s
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | . stage-out = 5 s
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | . log creation = 0 s
[2025-05-27 09:53:12] 2025-05-27 13:52:54,487 | INFO     | ..............................
[2025-05-27 09:53:12] 2025-05-27 13:52:54,779 | INFO     | 
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | job summary report
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | --------------------------------------------------
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | PanDA job id: 6666594354
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | task id: 44871837
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | errors: (none)
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | pilot state: finished 
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | transexitcode: 0
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | exeerrorcode: 0
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | exeerrordiag: 
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | exitcode: 0
[2025-05-27 09:53:12] 2025-05-27 13:52:54,780 | INFO     | exitmsg: OK
[2025-05-27 09:53:12] 2025-05-27 13:52:54,781 | INFO     | cpuconsumptiontime: 53675 s
[2025-05-27 09:53:12] 2025-05-27 13:52:54,781 | INFO     | nevents: 400
[2025-05-27 09:53:12] 2025-05-27 13:52:54,781 | INFO     | neventsw: 0
[2025-05-27 09:53:12] 2025-05-27 13:52:54,781 | INFO     | pid: 2735960
[2025-05-27 09:53:12] 2025-05-27 13:52:54,781 | INFO     | pgrp: 2735960
[2025-05-27 09:53:12] 2025-05-27 13:52:54,781 | INFO     | corecount: 8
[2025-05-27 09:53:12] 2025-05-27 13:52:54,781 | INFO     | event service: False
[2025-05-27 09:53:12] 2025-05-27 13:52:54,785 | INFO     | sizes: {0: 2405061, 1: 2405089, 2: 2405260, 13: 2405288, 24: 2405344, 33: 2405578, 35: 2405762, 12161: 2434961, 12168: 2443902, 12171: 2443958, 12198: 2444128}
[2025-05-27 09:53:12] 2025-05-27 13:52:54,785 | INFO     | --------------------------------------------------
[2025-05-27 09:53:12] 2025-05-27 13:52:54,785 | INFO     | 
[2025-05-27 09:53:12] 2025-05-27 13:52:54,785 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-27 09:53:12] 2025-05-27 13:52:54,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | job 6666594354 has completed (purged errors)
[2025-05-27 09:53:12] 2025-05-27 13:52:54,877 | INFO     | overall cleanup function is called
[2025-05-27 09:53:12] 2025-05-27 13:52:55,111 | INFO     | PID=2724022 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-27 09:53:12] 2025-05-27 13:52:55,111 | INFO     | .. there are 30 such processes running
[2025-05-27 09:53:12] 2025-05-27 13:52:55,890 | INFO     | --- collectZombieJob: --- 10, [2735960]
[2025-05-27 09:53:12] 2025-05-27 13:52:55,890 | INFO     | zombie collector waiting for pid 2735960
[2025-05-27 09:53:12] 2025-05-27 13:52:55,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 09:53:12] 2025-05-27 13:52:55,891 | INFO     | collected zombie processes
[2025-05-27 09:53:12] 2025-05-27 13:52:55,891 | INFO     | will attempt to kill all subprocesses of pid=2735960
[2025-05-27 09:53:12] 2025-05-27 13:52:56,894 | INFO     | process IDs to be killed: [2735960] (in reverse order)
[2025-05-27 09:53:12] 2025-05-27 13:52:57,129 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 09:53:12] 2025-05-27 13:52:57,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 09:53:12] 2025-05-27 13:52:57,147 | INFO     | did not find any defunct processes belonging to 2735960
[2025-05-27 09:53:12] 2025-05-27 13:52:57,216 | INFO     | did not find any defunct processes belonging to 2735960
[2025-05-27 09:53:12] 2025-05-27 13:52:57,217 | INFO     | ready for new job
[2025-05-27 09:53:12] 2025-05-27 13:52:57,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 09:53:12] 2025-05-27 13:52:57,218 | INFO     | **************************************
[2025-05-27 09:53:12] 2025-05-27 13:52:57,219 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 09:53:12] 2025-05-27 13:52:57,219 | INFO     | **************************************
[2025-05-27 09:53:12] 2025-05-27 13:52:57,219 | INFO     | 
[2025-05-27 09:53:12] 2025-05-27 13:52:57,242 | INFO     | architecture information:
[2025-05-27 09:53:12] 2025-05-27 13:52:57,250 | INFO     | executing command: cat /etc/os-release
[2025-05-27 09:53:12] 2025-05-27 13:52:57,301 | INFO     | cat /etc/os-release:
[2025-05-27 09:53:12] NAME="CentOS Linux"
[2025-05-27 09:53:12] VERSION="7 (Core)"
[2025-05-27 09:53:12] ID="centos"
[2025-05-27 09:53:12] ID_LIKE="rhel fedora"
[2025-05-27 09:53:12] VERSION_ID="7"
[2025-05-27 09:53:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 09:53:12] ANSI_COLOR="0;31"
[2025-05-27 09:53:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 09:53:12] HOME_URL="https://www.centos.org/"
[2025-05-27 09:53:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 09:53:12] 
[2025-05-27 09:53:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 09:53:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 09:53:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 09:53:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 09:53:12] 
[2025-05-27 09:53:12] 2025-05-27 13:52:57,302 | INFO     | **************************************
[2025-05-27 09:53:12] 2025-05-27 13:52:57,805 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-27 09:53:12] 2025-05-27 13:52:57,906 | INFO     | sufficient remaining disk space (73830236160 B)
[2025-05-27 09:53:12] 2025-05-27 13:52:57,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 09:53:12] 2025-05-27 13:52:57,906 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 09:53:12] 2025-05-27 13:52:57,906 | INFO     | update_server=False
[2025-05-27 09:53:12] 2025-05-27 13:52:57,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 09:53:12] 2025-05-27 13:52:57,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 09:53:12] 2025-05-27 13:52:57,907 | INFO     | aborting loop
[2025-05-27 09:53:12] 2025-05-27 13:52:57,907 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 09:53:12] 2025-05-27 13:52:57,907 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 09:53:12] 2025-05-27 13:52:57,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 09:53:12] 2025-05-27 13:52:57,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 09:53:12] 2025-05-27 13:52:57,916 | INFO     | all payload control threads have been joined
[2025-05-27 09:53:12] 2025-05-27 13:52:57,916 | INFO     | all job control threads have been joined
[2025-05-27 09:53:12] 2025-05-27 13:52:58,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 09:53:12] 2025-05-27 13:52:58,286 | INFO     | all data control threads have been joined
[2025-05-27 09:53:12] 2025-05-27 13:52:58,912 | INFO     | [job] retrieve thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:58,913 | INFO     | [job] job monitor thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:58,922 | INFO     | [payload] control thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:58,923 | INFO     | [job] control thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:58,984 | INFO     | [payload] failed_post thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:59,201 | INFO     | [job] validate thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:59,202 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:59,294 | INFO     | [data] control thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:59,517 | INFO     | [payload] validate_post thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:59,723 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:59,728 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:59,770 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:59,777 | INFO     | [data] copytool_in thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:52:59,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 09:53:12] 2025-05-27 13:53:00,269 | INFO     | [data] copytool_out thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:53:00,830 | INFO     | [job] queue monitor thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:53:00,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 09:53:12] 2025-05-27 13:53:04,925 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 09:53:12] 2025-05-27 13:53:06,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850430646080)>', '<ExcThread(monitor, started 139849394792192)>']
[2025-05-27 09:53:12] 2025-05-27 13:53:06,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 09:53:12] 2025-05-27 13:53:06,966 | INFO     | [monitor] control thread has ended
[2025-05-27 09:53:12] 2025-05-27 13:53:11,150 | INFO     | all workflow threads have been joined
[2025-05-27 09:53:12] 2025-05-27 13:53:11,150 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 09:53:12] 2025-05-27 13:53:11,151 | INFO     | traces error code: 0
[2025-05-27 09:53:12] 2025-05-27 13:53:11,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 09:53:12] 2025-05-27 13:53:11,347 [wrapper] ==== pilot stdout END ====
[2025-05-27 09:53:12] 2025-05-27 13:53:11,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 09:53:12] 2025-05-27 13:53:11,368 [wrapper] pilotpid: 2724022
[2025-05-27 09:53:12] 2025-05-27 13:53:11,383 [wrapper] Pilot exit status: 0
[2025-05-27 09:53:12] 2025-05-27 13:53:11,517 [wrapper] pandaids: 6666594354
[2025-05-27 09:53:12] 2025-05-27 13:53:11,823 [wrapper] cleanup supervisor_pilot 3891315 2724023
[2025-05-27 09:53:12] 2025-05-27 13:53:11,847 [wrapper] Test setup, not cleaning
[2025-05-27 09:53:12] 2025-05-27 13:53:11,866 [wrapper] apfmon messages muted
[2025-05-27 09:53:12] 2025-05-27 13:53:11,875 [wrapper] ==== wrapper stdout END ====
[2025-05-27 09:53:12] 2025-05-27 13:53:11,905 [wrapper] ==== wrapper stderr END ====
[2025-05-27 09:53:12]  *** Error codes and diagnostics ***
[2025-05-27 09:53:12]     "exeErrorCode": 0,
[2025-05-27 09:53:12]     "exeErrorDiag": "",
[2025-05-27 09:53:12]     "pilotErrorCode": 0,
[2025-05-27 09:53:12]     "pilotErrorDiag": "",
[2025-05-27 09:53:12]  *** Listing of results directory ***
[2025-05-27 09:53:12] total 423100
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas    495897 May 26 21:12 pilot3.tar.gz
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas      5111 May 26 21:14 queuedata.json
[2025-05-27 09:53:12] -rwx------. 1 boincer umatlas     37140 May 26 21:15 runpilot2-wrapper.sh
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas       100 May 27 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 09:53:12] -rwxr-xr-x. 1 boincer umatlas      7986 May 27 06:27 run_atlas
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas       105 May 27 06:27 job.xml
[2025-05-27 09:53:12] -rw-r--r--. 2 boincer umatlas 221431567 May 27 06:27 EVNT.44871834._002363.pool.root.1
[2025-05-27 09:53:12] -rw-r--r--. 2 boincer umatlas     15093 May 27 06:27 start_atlas.sh
[2025-05-27 09:53:12] drwxrwx--x. 2 boincer umatlas      4096 May 27 06:27 shared
[2025-05-27 09:53:12] -rw-r--r--. 2 boincer umatlas    508874 May 27 06:27 input.tar.gz
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas         0 May 27 06:27 boinc_lockfile
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas      2558 May 27 06:27 pandaJob.out
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas    990747 May 27 06:28 agis_schedconf.cvmfs.json
[2025-05-27 09:53:12] drwx------. 4 boincer umatlas      4096 May 27 06:28 pilot3
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas      6853 May 27 09:47 init_data.xml
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas 205247300 May 27 09:51 HITS.44871837._059807.pool.root.1
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas       531 May 27 09:51 boinc_task_state.xml
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas      1046 May 27 09:52 memory_monitor_summary.json
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas   1603667 May 27 09:52 agis_ddmendpoints.agis.ALL.json
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas    362338 May 27 09:52 log.44871837._059807.job.log.tgz.1
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas        95 May 27 09:52 pilot_heartbeat.json
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas      7729 May 27 09:52 heartbeat.json
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas      8192 May 27 09:53 boinc_mmap_file
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas        28 May 27 09:53 wrapper_checkpoint.txt
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas      4476 May 27 09:53 pilotlog.txt
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas   1005139 May 27 09:53 log.44871837._059807.job.log.1
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas       357 May 27 09:53 output.list
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas       620 May 27 09:53 runtime_log
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas   1382400 May 27 09:53 result.tar.gz
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas      8665 May 27 09:53 runtime_log.err
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas       657 May 27 09:53 aCrNDm65xd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmf7QKDmKjgHHm.diag
[2025-05-27 09:53:12] -rw-r--r--. 1 boincer umatlas     21300 May 27 09:53 stderr.txt
[2025-05-27 09:53:12] HITS file was successfully produced:
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas 205247300 May 27 09:51 shared/HITS.pool.root.1
[2025-05-27 09:53:12]  *** Contents of shared directory: ***
[2025-05-27 09:53:12] total 418560
[2025-05-27 09:53:12] -rw-r--r--. 2 boincer umatlas 221431567 May 27 06:27 ATLAS.root_0
[2025-05-27 09:53:12] -rw-r--r--. 2 boincer umatlas     15093 May 27 06:27 start_atlas.sh
[2025-05-27 09:53:12] -rw-r--r--. 2 boincer umatlas    508874 May 27 06:27 input.tar.gz
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas 205247300 May 27 09:51 HITS.pool.root.1
[2025-05-27 09:53:12] -rw-------. 1 boincer umatlas   1382400 May 27 09:53 result.tar.gz
09:53:13 (2718706): run_atlas exited; CPU time 54160.232363
09:53:13 (2718706): called boinc_finish(0)

</stderr_txt>
]]>

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