Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:07:29 (17490): wrapper (7.7.26015): starting
00:07:29 (17490): wrapper: running run_atlas (--nthreads 8)
[2025-05-28 00:07:29] Arguments: --nthreads 8
[2025-05-28 00:07:29] Threads: 8
[2025-05-28 00:07:29] Checking for CVMFS
[2025-05-28 00:07:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 00:07:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 00:07:30] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 00:07:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 00:07:31] 2.11.2.0 11048 22317 96852 146494 0 59 20680100 25165825 3847 130560 0 12085595 99.721 14197226 5262 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-28 00:07:31] CVMFS is ok
[2025-05-28 00:07:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 00:07:31] Checking for apptainer binary...
[2025-05-28 00:07:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 00:07:31] Running /usr/bin/apptainer --version
[2025-05-28 00:07:31] apptainer version 1.3.2-1.el7
[2025-05-28 00:07:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 00:07:42] cg-vwn330.simple-grid.lan
[2025-05-28 00:07:42] apptainer works
[2025-05-28 00:07:42] Set ATHENA_PROC_NUMBER=8
[2025-05-28 00:07:42] Set ATHENA_CORE_NUMBER=8
[2025-05-28 00:07:42] Starting ATLAS job with PandaID=6666745630
[2025-05-28 00:07:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 05:42:02]  *** The last 200 lines of the pilot log: ***
[2025-05-28 05:42:02] 2025-05-28 03:17:51,784 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 05:42:02] 2025-05-28 03:17:51,785 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 05:42:02] 2025-05-28 03:17:51,785 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 05:42:02] 2025-05-28 03:17:51,791 | INFO     | fitting pss+swap vs Time
[2025-05-28 05:42:02] 2025-05-28 03:17:51,792 | INFO     | sum of square deviations: 7720081493.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,808 | INFO     | monitor loop #1324: job 0:6666745630 is in state 'finished'
[2025-05-28 05:42:02] 2025-05-28 03:17:51,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 05:42:02] 2025-05-28 03:17:51,818 | INFO     | sum of deviations: 43085074700.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,818 | INFO     | mean x: 1748393230.5
[2025-05-28 05:42:02] 2025-05-28 03:17:51,818 | INFO     | mean y: 2476714.301369863
[2025-05-28 05:42:02] 2025-05-28 03:17:51,818 | INFO     | -- intersect: -9755147348.264572
[2025-05-28 05:42:02] 2025-05-28 03:17:51,818 | INFO     | intersect: -9755147348.264572
[2025-05-28 05:42:02] 2025-05-28 03:17:51,819 | INFO     | chi2: 6.645870332461744
[2025-05-28 05:42:02] 2025-05-28 03:17:51,819 | INFO     | sum of square deviations: 7330250928.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,822 | INFO     | sum of deviations: 61840002207.999985
[2025-05-28 05:42:02] 2025-05-28 03:17:51,823 | INFO     | mean x: 1748393078.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,823 | INFO     | mean y: 2483945.895470383
[2025-05-28 05:42:02] 2025-05-28 03:17:51,823 | INFO     | -- intersect: -14747438378.178604
[2025-05-28 05:42:02] 2025-05-28 03:17:51,823 | INFO     | intersect: -14747438378.178604
[2025-05-28 05:42:02] 2025-05-28 03:17:51,824 | INFO     | chi2: 5.91935935047582
[2025-05-28 05:42:02] 2025-05-28 03:17:51,824 | INFO     | current chi2=5.91935935047582 (change=10.931765828130622 %)
[2025-05-28 05:42:02] 2025-05-28 03:17:51,824 | INFO     | right removable region: 286
[2025-05-28 05:42:02] 2025-05-28 03:17:51,824 | INFO     | sum of square deviations: 7330250928.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,827 | INFO     | sum of deviations: -57769629588.000015
[2025-05-28 05:42:02] 2025-05-28 03:17:51,828 | INFO     | mean x: 1748393383.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,828 | INFO     | mean y: 2516137.512195122
[2025-05-28 05:42:02] 2025-05-28 03:17:51,828 | INFO     | -- intersect: 13781585790.394922
[2025-05-28 05:42:02] 2025-05-28 03:17:51,828 | INFO     | intersect: 13781585790.394922
[2025-05-28 05:42:02] 2025-05-28 03:17:51,829 | INFO     | chi2: 2.050470213100347
[2025-05-28 05:42:02] 2025-05-28 03:17:51,829 | INFO     | current chi2=2.050470213100347 (change=69.14670147738471 %)
[2025-05-28 05:42:02] 2025-05-28 03:17:51,829 | INFO     | sum of square deviations: 6953769450.5
[2025-05-28 05:42:02] 2025-05-28 03:17:51,841 | INFO     | sum of deviations: -96167567713.5
[2025-05-28 05:42:02] 2025-05-28 03:17:51,841 | INFO     | mean x: 1748393535.5
[2025-05-28 05:42:02] 2025-05-28 03:17:51,842 | INFO     | mean y: 2531588.9468085105
[2025-05-28 05:42:02] 2025-05-28 03:17:51,842 | INFO     | -- intersect: 24182043853.75912
[2025-05-28 05:42:02] 2025-05-28 03:17:51,842 | INFO     | intersect: 24182043853.75912
[2025-05-28 05:42:02] 2025-05-28 03:17:51,842 | INFO     | chi2: 1.0652719070570649
[2025-05-28 05:42:02] 2025-05-28 03:17:51,842 | INFO     | current chi2=1.0652719070570649 (change=48.047433205754544 %)
[2025-05-28 05:42:02] 2025-05-28 03:17:51,843 | INFO     | sum of square deviations: 6590404498.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,846 | INFO     | sum of deviations: -93792823653.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,846 | INFO     | mean x: 1748393688.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,846 | INFO     | mean y: 2530569.2924187724
[2025-05-28 05:42:02] 2025-05-28 03:17:51,846 | INFO     | -- intersect: 24885188516.06452
[2025-05-28 05:42:02] 2025-05-28 03:17:51,846 | INFO     | intersect: 24885188516.06452
[2025-05-28 05:42:02] 2025-05-28 03:17:51,847 | INFO     | chi2: 1.049246975626688
[2025-05-28 05:42:02] 2025-05-28 03:17:51,847 | INFO     | current chi2=1.049246975626688 (change=1.5043043305861286 %)
[2025-05-28 05:42:02] 2025-05-28 03:17:51,847 | INFO     | left removable region: 30
[2025-05-28 05:42:02] 2025-05-28 03:17:51,848 | INFO     | sum of square deviations: 5202255680.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,850 | INFO     | sum of deviations: -46839604326.0
[2025-05-28 05:42:02] 2025-05-28 03:17:51,850 | INFO     | mean x: 1748393962.5
[2025-05-28 05:42:02] 2025-05-28 03:17:51,851 | INFO     | mean y: 2526724.296875
[2025-05-28 05:42:02] 2025-05-28 03:17:51,851 | INFO     | -- intersect: 15744559882.011122
[2025-05-28 05:42:02] 2025-05-28 03:17:51,851 | INFO     | intersect: 15744559882.011122
[2025-05-28 05:42:02] 2025-05-28 03:17:51,851 | INFO     | chi2: 0.21678540693100226
[2025-05-28 05:42:02] 2025-05-28 03:17:51,852 | INFO     | -- intersect: 15744559882.011122
[2025-05-28 05:42:02] 2025-05-28 03:17:51,852 | INFO     | current memory leak: -9.00 B/s (using 256 data points, chi2=0.22)
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | ..............................
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | . Timing measurements:
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | . get job = 0 s
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | . initial setup = 10 s
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | . payload setup = 144 s
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | . stage-in = 0 s
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | . payload execution = 17958 s
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | . stage-out = 3 s
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | . log creation = 1 s
[2025-05-28 05:42:02] 2025-05-28 03:17:51,853 | INFO     | ..............................
[2025-05-28 05:42:02] 2025-05-28 03:17:52,093 | INFO     | 
[2025-05-28 05:42:02] 2025-05-28 03:17:52,093 | INFO     | job summary report
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | --------------------------------------------------
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | PanDA job id: 6666745630
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | task id: 44871837
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | errors: (none)
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | pilot state: finished 
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | transexitcode: 0
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | exeerrorcode: 0
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | exeerrordiag: 
[2025-05-28 05:42:02] 2025-05-28 03:17:52,094 | INFO     | exitcode: 0
[2025-05-28 05:42:02] 2025-05-28 03:17:52,095 | INFO     | exitmsg: OK
[2025-05-28 05:42:02] 2025-05-28 03:17:52,095 | INFO     | cpuconsumptiontime: 68162 s
[2025-05-28 05:42:02] 2025-05-28 03:17:52,095 | INFO     | nevents: 400
[2025-05-28 05:42:02] 2025-05-28 03:17:52,095 | INFO     | neventsw: 0
[2025-05-28 05:42:02] 2025-05-28 03:17:52,095 | INFO     | pid: 31201
[2025-05-28 05:42:02] 2025-05-28 03:17:52,095 | INFO     | pgrp: 31201
[2025-05-28 05:42:02] 2025-05-28 03:17:52,095 | INFO     | corecount: 8
[2025-05-28 05:42:02] 2025-05-28 03:17:52,095 | INFO     | event service: False
[2025-05-28 05:42:02] 2025-05-28 03:17:52,095 | INFO     | sizes: {0: 2404400, 1: 2405256, 12: 2405256, 23: 2405284, 34: 2405312, 44: 2405340, 55: 2405496, 66: 2405524, 77: 2405552, 87: 2405608, 92: 2405842, 98: 2406150, 1
[2025-05-28 05:42:02] 2025-05-28 03:17:52,096 | INFO     | --------------------------------------------------
[2025-05-28 05:42:02] 2025-05-28 03:17:52,096 | INFO     | 
[2025-05-28 05:42:02] 2025-05-28 03:17:52,096 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-28 05:42:02] 2025-05-28 03:17:52,402 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,402 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 05:42:02] 2025-05-28 03:17:52,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,404 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 05:42:02] 2025-05-28 03:17:52,404 | INFO     | job 6666745630 has completed (purged errors)
[2025-05-28 05:42:02] 2025-05-28 03:17:52,404 | INFO     | overall cleanup function is called
[2025-05-28 05:42:02] 2025-05-28 03:17:53,415 | INFO     | --- collectZombieJob: --- 10, [31201]
[2025-05-28 05:42:02] 2025-05-28 03:17:53,415 | INFO     | zombie collector waiting for pid 31201
[2025-05-28 05:42:02] 2025-05-28 03:17:53,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 05:42:02] 2025-05-28 03:17:53,416 | INFO     | collected zombie processes
[2025-05-28 05:42:02] 2025-05-28 03:17:53,416 | INFO     | will attempt to kill all subprocesses of pid=31201
[2025-05-28 05:42:02] 2025-05-28 03:17:53,521 | INFO     | process IDs to be killed: [31201] (in reverse order)
[2025-05-28 05:42:02] 2025-05-28 03:17:54,456 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 05:42:02] 2025-05-28 03:17:54,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 05:42:02] 2025-05-28 03:17:54,460 | INFO     | did not find any defunct processes belonging to 31201
[2025-05-28 05:42:02] 2025-05-28 03:17:54,462 | INFO     | did not find any defunct processes belonging to 31201
[2025-05-28 05:42:02] 2025-05-28 03:17:54,463 | INFO     | ready for new job
[2025-05-28 05:42:02] 2025-05-28 03:17:54,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 05:42:02] 2025-05-28 03:17:54,465 | INFO     | **************************************
[2025-05-28 05:42:02] 2025-05-28 03:17:54,465 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 05:42:02] 2025-05-28 03:17:54,465 | INFO     | **************************************
[2025-05-28 05:42:02] 2025-05-28 03:17:54,465 | INFO     | 
[2025-05-28 05:42:02] 2025-05-28 03:17:54,466 | INFO     | pilot is running in a VM
[2025-05-28 05:42:02] 2025-05-28 03:17:54,466 | INFO     | architecture information:
[2025-05-28 05:42:02] 2025-05-28 03:17:54,479 | INFO     | executing command: cat /etc/os-release
[2025-05-28 05:42:02] 2025-05-28 03:17:54,704 | INFO     | cat /etc/os-release:
[2025-05-28 05:42:02] NAME="CentOS Linux"
[2025-05-28 05:42:02] VERSION="7 (Core)"
[2025-05-28 05:42:02] ID="centos"
[2025-05-28 05:42:02] ID_LIKE="rhel fedora"
[2025-05-28 05:42:02] VERSION_ID="7"
[2025-05-28 05:42:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 05:42:02] ANSI_COLOR="0;31"
[2025-05-28 05:42:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 05:42:02] HOME_URL="https://www.centos.org/"
[2025-05-28 05:42:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 05:42:02] 
[2025-05-28 05:42:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 05:42:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 05:42:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 05:42:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 05:42:02] 
[2025-05-28 05:42:02] 2025-05-28 03:17:54,704 | INFO     | **************************************
[2025-05-28 05:42:02] 2025-05-28 03:17:55,207 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-28 05:42:02] 2025-05-28 03:17:55,443 | INFO     | sufficient remaining disk space (495144927232 B)
[2025-05-28 05:42:02] 2025-05-28 03:17:55,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 05:42:02] 2025-05-28 03:17:55,443 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 05:42:02] 2025-05-28 03:17:55,444 | INFO     | update_server=False
[2025-05-28 05:42:02] 2025-05-28 03:17:55,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 05:42:02] 2025-05-28 03:17:55,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 05:42:02] 2025-05-28 03:17:55,444 | INFO     | aborting loop
[2025-05-28 05:42:02] 2025-05-28 03:17:55,758 | INFO     | all payload control threads have been joined
[2025-05-28 05:42:02] 2025-05-28 03:17:55,761 | INFO     | all data control threads have been joined
[2025-05-28 05:42:02] 2025-05-28 03:17:56,037 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 05:42:02] 2025-05-28 03:17:56,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 05:42:02] 2025-05-28 03:17:56,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 05:42:02] 2025-05-28 03:17:56,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 05:42:02] 2025-05-28 03:17:56,449 | INFO     | [job] retrieve thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:56,450 | INFO     | [job] job monitor thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:56,764 | INFO     | [payload] control thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:56,767 | INFO     | [data] control thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:56,825 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:56,827 | INFO     | [job] validate thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:56,838 | INFO     | [payload] validate_post thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:57,028 | INFO     | all job control threads have been joined
[2025-05-28 05:42:02] 2025-05-28 03:17:57,048 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:57,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 05:42:02] 2025-05-28 03:17:57,608 | INFO     | [data] copytool_in thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:57,639 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:58,013 | INFO     | [payload] failed_post thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:58,034 | INFO     | [job] control thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:58,070 | INFO     | [data] copytool_out thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:58,107 | INFO     | [job] queue monitor thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:17:58,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 05:42:02] 2025-05-28 03:18:02,274 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:18:06,017 | INFO     | job.realtimelogging is not enabled
[2025-05-28 05:42:02] 2025-05-28 03:18:07,023 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 05:42:02] 2025-05-28 03:18:07,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690418243392)>', '<ExcThread(monitor, started 139689835091712)>']
[2025-05-28 05:42:02] 2025-05-28 03:18:08,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 05:42:02] 2025-05-28 03:18:08,108 | INFO     | [monitor] control thread has ended
[2025-05-28 05:42:02] 2025-05-28 03:18:12,390 | INFO     | all workflow threads have been joined
[2025-05-28 05:42:02] 2025-05-28 03:18:12,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 05:42:02] 2025-05-28 03:18:12,391 | INFO     | traces error code: 0
[2025-05-28 05:42:02] 2025-05-28 03:18:12,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 05:42:02] 2025-05-28 03:18:12,661 [wrapper] ==== pilot stdout END ====
[2025-05-28 05:42:02] 2025-05-28 03:18:12,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 05:42:02] 2025-05-28 03:18:12,739 [wrapper] pilotpid: 22572
[2025-05-28 05:42:02] 2025-05-28 03:18:12,843 [wrapper] Pilot exit status: 0
[2025-05-28 05:42:02] 2025-05-28 03:18:12,949 [wrapper] pandaids: 6666745630
[2025-05-28 05:42:02] 2025-05-28 03:18:13,986 [wrapper] cleanup supervisor_pilot 19439 22573
[2025-05-28 05:42:02] 2025-05-28 03:18:14,060 [wrapper] Test setup, not cleaning
[2025-05-28 05:42:02] 2025-05-28 03:18:14,198 [wrapper] apfmon messages muted
[2025-05-28 05:42:02] 2025-05-28 03:18:14,306 [wrapper] ==== wrapper stdout END ====
[2025-05-28 05:42:02] 2025-05-28 03:18:14,434 [wrapper] ==== wrapper stderr END ====
[2025-05-28 05:42:02]  *** Error codes and diagnostics ***
[2025-05-28 05:42:02]     "exeErrorCode": 0,
[2025-05-28 05:42:02]     "exeErrorDiag": "",
[2025-05-28 05:42:02]     "pilotErrorCode": 0,
[2025-05-28 05:42:02]     "pilotErrorDiag": "",
[2025-05-28 05:42:02]  *** Listing of results directory ***
[2025-05-28 05:42:02] total 415864
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc    495897 May 27 05:05 pilot3.tar.gz
[2025-05-28 05:42:02] -rwx------. 1 boinc boinc     37140 May 27 05:23 runpilot2-wrapper.sh
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc      5111 May 27 05:23 queuedata.json
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc       100 May 28 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 05:42:02] -rwxr-xr-x. 1 boinc boinc      7986 May 28 00:07 run_atlas
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc       105 May 28 00:07 job.xml
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc      6370 May 28 00:07 init_data.xml
[2025-05-28 05:42:02] -rw-r--r--. 2 boinc boinc 224299110 May 28 00:07 EVNT.44871834._002428.pool.root.1
[2025-05-28 05:42:02] -rw-r--r--. 2 boinc boinc     15093 May 28 00:07 start_atlas.sh
[2025-05-28 05:42:02] drwxrwx--x. 2 boinc boinc        68 May 28 00:07 shared
[2025-05-28 05:42:02] -rw-r--r--. 2 boinc boinc    508874 May 28 00:07 input.tar.gz
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc         0 May 28 00:07 boinc_lockfile
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc      2556 May 28 00:07 pandaJob.out
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc    991111 May 28 00:10 agis_schedconf.cvmfs.json
[2025-05-28 05:42:02] drwx------. 4 boinc boinc      4096 May 28 00:11 pilot3
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc 193802098 May 28 05:14 HITS.44871837._061517.pool.root.1
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc       531 May 28 05:14 boinc_task_state.xml
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc      1013 May 28 05:15 memory_monitor_summary.json
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc   1603667 May 28 05:16 agis_ddmendpoints.agis.ALL.json
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc    404151 May 28 05:16 log.44871837._061517.job.log.tgz.1
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc        95 May 28 05:17 pilot_heartbeat.json
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc      7685 May 28 05:17 heartbeat.json
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc      4488 May 28 05:18 pilotlog.txt
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc   1557582 May 28 05:18 log.44871837._061517.job.log.1
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc       357 May 28 05:18 output.list
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc       620 May 28 05:18 runtime_log
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc   1976320 May 28 05:18 result.tar.gz
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc      8659 May 28 05:18 runtime_log.err
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc       657 May 28 05:18 l3XLDmh5zd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgFRKDmYCMV3n.diag
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc      8192 May 28 05:42 boinc_mmap_file
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc        28 May 28 05:42 wrapper_checkpoint.txt
[2025-05-28 05:42:02] -rw-r--r--. 1 boinc boinc     20499 May 28 05:42 stderr.txt
[2025-05-28 05:42:02] HITS file was successfully produced:
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc 193802098 May 28 05:14 shared/HITS.pool.root.1
[2025-05-28 05:42:02]  *** Contents of shared directory: ***
[2025-05-28 05:42:02] total 410752
[2025-05-28 05:42:02] -rw-r--r--. 2 boinc boinc 224299110 May 28 00:07 ATLAS.root_0
[2025-05-28 05:42:02] -rw-r--r--. 2 boinc boinc     15093 May 28 00:07 start_atlas.sh
[2025-05-28 05:42:02] -rw-r--r--. 2 boinc boinc    508874 May 28 00:07 input.tar.gz
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc 193802098 May 28 05:14 HITS.pool.root.1
[2025-05-28 05:42:02] -rw-------. 1 boinc boinc   1976320 May 28 05:18 result.tar.gz
05:42:04 (17490): run_atlas exited; CPU time 68419.122307
05:42:04 (17490): called boinc_finish(0)

</stderr_txt>
]]>

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