Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:59:44 (2597451): wrapper (7.7.26015): starting
05:59:44 (2597451): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 05:59:44] Arguments: --nthreads 8
[2025-05-27 05:59:44] Threads: 8
[2025-05-27 05:59:44] Checking for CVMFS
[2025-05-27 05:59:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 05:59:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 05:59:45] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 05:59:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 05:59:46] 2.12.6.0 1699072 11624 329184 146475 3 604 26212677 32935937 25733 16776704 0 57868146 99.565 61597652 28444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-27 05:59:46] CVMFS is ok
[2025-05-27 05:59:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 05:59:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 05:59:46] Further information can be found at the LHC@home message board.
[2025-05-27 05:59:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 05:59:46] Checking for apptainer binary...
[2025-05-27 05:59:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 05:59:46] Running /usr/bin/apptainer --version
[2025-05-27 05:59:46] apptainer version 1.4.1-1.el9
[2025-05-27 05:59:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 05:59:47] c6-2-11-3.aglt2.org
[2025-05-27 05:59:47] apptainer works
[2025-05-27 05:59:47] Set ATHENA_PROC_NUMBER=8
[2025-05-27 05:59:47] Set ATHENA_CORE_NUMBER=8
[2025-05-27 05:59:47] Starting ATLAS job with PandaID=6666745289
[2025-05-27 05:59:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 10:54:16]  *** The last 200 lines of the pilot log: ***
[2025-05-27 10:54:16] 2025-05-27 14:53:39,421 | INFO     | -- intersect: -30231897671.92537
[2025-05-27 10:54:16] 2025-05-27 14:53:39,421 | INFO     | intersect: -30231897671.92537
[2025-05-27 10:54:16] 2025-05-27 14:53:39,425 | INFO     | chi2: 4.910846371639492
[2025-05-27 10:54:16] 2025-05-27 14:53:39,426 | INFO     | sum of square deviations: 6880055744.612093
[2025-05-27 10:54:16] 2025-05-27 14:53:39,428 | INFO     | sum of deviations: 142519478749.5409
[2025-05-27 10:54:16] 2025-05-27 14:53:39,428 | INFO     | mean x: 1748348727.2099645
[2025-05-27 10:54:16] 2025-05-27 14:53:39,428 | INFO     | mean y: 2074033.0925266903
[2025-05-27 10:54:16] 2025-05-27 14:53:39,428 | INFO     | -- intersect: -36214747243.32232
[2025-05-27 10:54:16] 2025-05-27 14:53:39,428 | INFO     | intersect: -36214747243.32232
[2025-05-27 10:54:16] 2025-05-27 14:53:39,429 | INFO     | chi2: 4.225536134343717
[2025-05-27 10:54:16] 2025-05-27 14:53:39,433 | INFO     | current chi2=4.225536134343717 (change=13.955033113100274 %)
[2025-05-27 10:54:16] 2025-05-27 14:53:39,433 | INFO     | right removable region: 280
[2025-05-27 10:54:16] 2025-05-27 14:53:39,434 | INFO     | sum of square deviations: 6880019754.612095
[2025-05-27 10:54:16] 2025-05-27 14:53:39,436 | INFO     | sum of deviations: 64709476297.84345
[2025-05-27 10:54:16] 2025-05-27 14:53:39,436 | INFO     | mean x: 1748349032.2099645
[2025-05-27 10:54:16] 2025-05-27 14:53:39,436 | INFO     | mean y: 2091862.3416370107
[2025-05-27 10:54:16] 2025-05-27 14:53:39,436 | INFO     | -- intersect: -16441865320.23871
[2025-05-27 10:54:16] 2025-05-27 14:53:39,436 | INFO     | intersect: -16441865320.23871
[2025-05-27 10:54:16] 2025-05-27 14:53:39,437 | INFO     | chi2: 2.398783826952254
[2025-05-27 10:54:16] 2025-05-27 14:53:39,437 | INFO     | current chi2=2.398783826952254 (change=51.1533522855569 %)
[2025-05-27 10:54:16] 2025-05-27 14:53:39,441 | INFO     | sum of square deviations: 6519232204.387695
[2025-05-27 10:54:16] 2025-05-27 14:53:39,443 | INFO     | sum of deviations: 25606201878.532623
[2025-05-27 10:54:16] 2025-05-27 14:53:39,444 | INFO     | mean x: 1748349184.713768
[2025-05-27 10:54:16] 2025-05-27 14:53:39,444 | INFO     | mean y: 2108372.7282608696
[2025-05-27 10:54:16] 2025-05-27 14:53:39,444 | INFO     | -- intersect: -6865047263.761827
[2025-05-27 10:54:16] 2025-05-27 14:53:39,444 | INFO     | intersect: -6865047263.761827
[2025-05-27 10:54:16] 2025-05-27 14:53:39,444 | INFO     | chi2: 1.4381107384744563
[2025-05-27 10:54:16] 2025-05-27 14:53:39,444 | INFO     | current chi2=1.4381107384744563 (change=40.04833939948518 %)
[2025-05-27 10:54:16] 2025-05-27 14:53:39,445 | INFO     | sum of square deviations: 6171282104.154986
[2025-05-27 10:54:16] 2025-05-27 14:53:39,451 | INFO     | sum of deviations: -2462869915.372698
[2025-05-27 10:54:16] 2025-05-27 14:53:39,451 | INFO     | mean x: 1748349337.2177122
[2025-05-27 10:54:16] 2025-05-27 14:53:39,451 | INFO     | mean y: 2120652.78597786
[2025-05-27 10:54:16] 2025-05-27 14:53:39,451 | INFO     | -- intersect: 699861723.6886019
[2025-05-27 10:54:16] 2025-05-27 14:53:39,451 | INFO     | intersect: 699861723.6886019
[2025-05-27 10:54:16] 2025-05-27 14:53:39,452 | INFO     | chi2: 0.9190788609567977
[2025-05-27 10:54:16] 2025-05-27 14:53:39,452 | INFO     | current chi2=0.9190788609567977 (change=36.09123161601909 %)
[2025-05-27 10:54:16] 2025-05-27 14:53:39,452 | INFO     | sum of square deviations: 5835936891.413512
[2025-05-27 10:54:16] 2025-05-27 14:53:39,458 | INFO     | sum of deviations: -15111946530.360905
[2025-05-27 10:54:16] 2025-05-27 14:53:39,459 | INFO     | mean x: 1748349489.7218046
[2025-05-27 10:54:16] 2025-05-27 14:53:39,459 | INFO     | mean y: 2126394.251879699
[2025-05-27 10:54:16] 2025-05-27 14:53:39,459 | INFO     | -- intersect: 4529413871.2520485
[2025-05-27 10:54:16] 2025-05-27 14:53:39,459 | INFO     | intersect: 4529413871.2520485
[2025-05-27 10:54:16] 2025-05-27 14:53:39,459 | INFO     | chi2: 0.7945774670102638
[2025-05-27 10:54:16] 2025-05-27 14:53:39,459 | INFO     | current chi2=0.7945774670102638 (change=13.546323306459579 %)
[2025-05-27 10:54:16] 2025-05-27 14:53:39,459 | INFO     | left removable region: 40
[2025-05-27 10:54:16] 2025-05-27 14:53:39,460 | INFO     | sum of square deviations: 4286393203.983345
[2025-05-27 10:54:16] 2025-05-27 14:53:39,465 | INFO     | sum of deviations: 7109054262.291669
[2025-05-27 10:54:16] 2025-05-27 14:53:39,465 | INFO     | mean x: 1748349916.7416666
[2025-05-27 10:54:16] 2025-05-27 14:53:39,465 | INFO     | mean y: 2132939.0208333335
[2025-05-27 10:54:16] 2025-05-27 14:53:39,466 | INFO     | -- intersect: -2897534412.0843463
[2025-05-27 10:54:16] 2025-05-27 14:53:39,466 | INFO     | intersect: -2897534412.0843463
[2025-05-27 10:54:16] 2025-05-27 14:53:39,466 | INFO     | chi2: 0.08673394734860519
[2025-05-27 10:54:16] 2025-05-27 14:53:39,466 | INFO     | -- intersect: -2897534412.0843463
[2025-05-27 10:54:16] 2025-05-27 14:53:39,466 | INFO     | current memory leak: 1.66 B/s (using 240 data points, chi2=0.09)
[2025-05-27 10:54:16] 2025-05-27 14:53:39,467 | INFO     | ..............................
[2025-05-27 10:54:16] 2025-05-27 14:53:39,467 | INFO     | . Timing measurements:
[2025-05-27 10:54:16] 2025-05-27 14:53:39,467 | INFO     | . get job = 0 s
[2025-05-27 10:54:16] 2025-05-27 14:53:39,467 | INFO     | . initial setup = 7 s
[2025-05-27 10:54:16] 2025-05-27 14:53:39,467 | INFO     | . payload setup = 45 s
[2025-05-27 10:54:16] 2025-05-27 14:53:39,467 | INFO     | . stage-in = 0 s
[2025-05-27 10:54:16] 2025-05-27 14:53:39,467 | INFO     | . payload execution = 17416 s
[2025-05-27 10:54:16] 2025-05-27 14:53:39,467 | INFO     | . stage-out = 6 s
[2025-05-27 10:54:16] 2025-05-27 14:53:39,468 | INFO     | . log creation = 0 s
[2025-05-27 10:54:16] 2025-05-27 14:53:39,468 | INFO     | ..............................
[2025-05-27 10:54:16] 2025-05-27 14:53:39,774 | INFO     | 
[2025-05-27 10:54:16] 2025-05-27 14:53:39,774 | INFO     | job summary report
[2025-05-27 10:54:16] 2025-05-27 14:53:39,774 | INFO     | --------------------------------------------------
[2025-05-27 10:54:16] 2025-05-27 14:53:39,774 | INFO     | PanDA job id: 6666745289
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | task id: 44871837
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | errors: (none)
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | pilot state: finished 
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | transexitcode: 0
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | exeerrorcode: 0
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | exeerrordiag: 
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | exitcode: 0
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | exitmsg: OK
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | cpuconsumptiontime: 54659 s
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | nevents: 400
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | neventsw: 0
[2025-05-27 10:54:16] 2025-05-27 14:53:39,775 | INFO     | pid: 2617092
[2025-05-27 10:54:16] 2025-05-27 14:53:39,776 | INFO     | pgrp: 2617092
[2025-05-27 10:54:16] 2025-05-27 14:53:39,776 | INFO     | corecount: 8
[2025-05-27 10:54:16] 2025-05-27 14:53:39,776 | INFO     | event service: False
[2025-05-27 10:54:16] 2025-05-27 14:53:39,776 | INFO     | sizes: {0: 2404956, 1: 2405040, 2: 2405040, 3: 2405267, 14: 2405267, 25: 2405295, 33: 2405657, 36: 2405713, 17465: 2437462, 17466: 2437461, 17472: 2446458, 17474: 
[2025-05-27 10:54:16] 2025-05-27 14:53:39,776 | INFO     | --------------------------------------------------
[2025-05-27 10:54:16] 2025-05-27 14:53:39,776 | INFO     | 
[2025-05-27 10:54:16] 2025-05-27 14:53:39,776 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-27 10:54:16] 2025-05-27 14:53:39,933 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,934 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 10:54:16] 2025-05-27 14:53:39,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 10:54:16] 2025-05-27 14:53:39,935 | INFO     | job 6666745289 has completed (purged errors)
[2025-05-27 10:54:16] 2025-05-27 14:53:39,935 | INFO     | overall cleanup function is called
[2025-05-27 10:54:16] 2025-05-27 14:53:40,947 | INFO     | --- collectZombieJob: --- 10, [2617092]
[2025-05-27 10:54:16] 2025-05-27 14:53:40,947 | INFO     | zombie collector waiting for pid 2617092
[2025-05-27 10:54:16] 2025-05-27 14:53:40,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 10:54:16] 2025-05-27 14:53:40,947 | INFO     | collected zombie processes
[2025-05-27 10:54:16] 2025-05-27 14:53:40,947 | INFO     | will attempt to kill all subprocesses of pid=2617092
[2025-05-27 10:54:16] 2025-05-27 14:53:41,077 | INFO     | PID=2602677 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-27 10:54:16] 2025-05-27 14:53:41,088 | INFO     | .. there are 29 such processes running
[2025-05-27 10:54:16] 2025-05-27 14:53:41,887 | INFO     | process IDs to be killed: [2617092] (in reverse order)
[2025-05-27 10:54:16] 2025-05-27 14:53:42,188 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 10:54:16] 2025-05-27 14:53:42,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 10:54:16] 2025-05-27 14:53:42,230 | INFO     | did not find any defunct processes belonging to 2617092
[2025-05-27 10:54:16] 2025-05-27 14:53:42,263 | INFO     | did not find any defunct processes belonging to 2617092
[2025-05-27 10:54:16] 2025-05-27 14:53:42,264 | INFO     | ready for new job
[2025-05-27 10:54:16] 2025-05-27 14:53:42,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 10:54:16] 2025-05-27 14:53:42,270 | INFO     | **************************************
[2025-05-27 10:54:16] 2025-05-27 14:53:42,270 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 10:54:16] 2025-05-27 14:53:42,270 | INFO     | **************************************
[2025-05-27 10:54:16] 2025-05-27 14:53:42,271 | INFO     | 
[2025-05-27 10:54:16] 2025-05-27 14:53:42,293 | INFO     | architecture information:
[2025-05-27 10:54:16] 2025-05-27 14:53:42,297 | INFO     | executing command: cat /etc/os-release
[2025-05-27 10:54:16] 2025-05-27 14:53:42,362 | INFO     | cat /etc/os-release:
[2025-05-27 10:54:16] NAME="CentOS Linux"
[2025-05-27 10:54:16] VERSION="7 (Core)"
[2025-05-27 10:54:16] ID="centos"
[2025-05-27 10:54:16] ID_LIKE="rhel fedora"
[2025-05-27 10:54:16] VERSION_ID="7"
[2025-05-27 10:54:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 10:54:16] ANSI_COLOR="0;31"
[2025-05-27 10:54:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 10:54:16] HOME_URL="https://www.centos.org/"
[2025-05-27 10:54:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 10:54:16] 
[2025-05-27 10:54:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 10:54:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 10:54:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 10:54:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 10:54:16] 
[2025-05-27 10:54:16] 2025-05-27 14:53:42,363 | INFO     | **************************************
[2025-05-27 10:54:16] 2025-05-27 14:53:42,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-27 10:54:16] 2025-05-27 14:53:42,965 | INFO     | sufficient remaining disk space (74011639808 B)
[2025-05-27 10:54:16] 2025-05-27 14:53:42,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 10:54:16] 2025-05-27 14:53:42,966 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 10:54:16] 2025-05-27 14:53:42,966 | INFO     | update_server=False
[2025-05-27 10:54:16] 2025-05-27 14:53:42,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 10:54:16] 2025-05-27 14:53:42,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 10:54:16] 2025-05-27 14:53:42,967 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 10:54:16] 2025-05-27 14:53:43,055 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-27 10:54:16] 2025-05-27 14:53:43,056 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-27 10:54:16] 2025-05-27 14:53:43,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 10:54:16] 2025-05-27 14:53:43,056 | INFO     | will abort loop
[2025-05-27 10:54:16] 2025-05-27 14:53:43,096 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 10:54:16] 2025-05-27 14:53:43,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 10:54:16] 2025-05-27 14:53:43,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 10:54:16] 2025-05-27 14:53:43,658 | INFO     | all job control threads have been joined
[2025-05-27 10:54:16] 2025-05-27 14:53:43,704 | INFO     | all payload control threads have been joined
[2025-05-27 10:54:16] 2025-05-27 14:53:43,926 | INFO     | all data control threads have been joined
[2025-05-27 10:54:16] 2025-05-27 14:53:43,972 | INFO     | [job] retrieve thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:43,974 | INFO     | [data] copytool_in thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:43,975 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,061 | INFO     | [job] job monitor thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,269 | INFO     | [payload] failed_post thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,278 | INFO     | [payload] validate_post thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,365 | INFO     | [job] validate thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,459 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,460 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,664 | INFO     | [job] control thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,710 | INFO     | [payload] control thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 10:54:16] 2025-05-27 14:53:44,932 | INFO     | [data] control thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:44,976 | INFO     | [data] copytool_out thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:45,812 | INFO     | [job] queue monitor thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:46,985 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 10:54:16] 2025-05-27 14:53:48,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621045675840)>', '<ExcThread(monitor, started 140620140095232)>']
[2025-05-27 10:54:16] 2025-05-27 14:53:49,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 10:54:16] 2025-05-27 14:53:49,143 | INFO     | [monitor] control thread has ended
[2025-05-27 10:54:16] 2025-05-27 14:53:54,013 | INFO     | all workflow threads have been joined
[2025-05-27 10:54:16] 2025-05-27 14:53:54,013 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 10:54:16] 2025-05-27 14:53:54,014 | INFO     | traces error code: 0
[2025-05-27 10:54:16] 2025-05-27 14:53:54,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 10:54:16] 2025-05-27 14:53:54,629 [wrapper] ==== pilot stdout END ====
[2025-05-27 10:54:16] 2025-05-27 14:53:54,664 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 10:54:16] 2025-05-27 14:53:54,709 [wrapper] pilotpid: 2602677
[2025-05-27 10:54:16] 2025-05-27 14:53:54,754 [wrapper] Pilot exit status: 0
[2025-05-27 10:54:16] 2025-05-27 14:53:54,888 [wrapper] pandaids: 6666745289
[2025-05-27 10:54:16] 2025-05-27 14:53:55,525 [wrapper] cleanup supervisor_pilot   59239 2602678
[2025-05-27 10:54:16] 2025-05-27 14:53:55,529 [wrapper] Test setup, not cleaning
[2025-05-27 10:54:16] 2025-05-27 14:53:55,531 [wrapper] apfmon messages muted
[2025-05-27 10:54:16] 2025-05-27 14:53:55,534 [wrapper] ==== wrapper stdout END ====
[2025-05-27 10:54:16] 2025-05-27 14:53:55,535 [wrapper] ==== wrapper stderr END ====
[2025-05-27 10:54:16]  *** Error codes and diagnostics ***
[2025-05-27 10:54:16]     "exeErrorCode": 0,
[2025-05-27 10:54:16]     "exeErrorDiag": "",
[2025-05-27 10:54:16]     "pilotErrorCode": 0,
[2025-05-27 10:54:16]     "pilotErrorDiag": "",
[2025-05-27 10:54:16]  *** Listing of results directory ***
[2025-05-27 10:54:16] total 421456
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas    495897 May 26 23:05 pilot3.tar.gz
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas      5111 May 26 23:14 queuedata.json
[2025-05-27 10:54:16] -rwx------. 1 boincer umatlas     37140 May 26 23:16 runpilot2-wrapper.sh
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas       100 May 27 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 10:54:16] -rwxr-xr-x. 1 boincer umatlas      7986 May 27 05:59 run_atlas
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas       105 May 27 05:59 job.xml
[2025-05-27 10:54:16] -rw-r--r--. 2 boincer umatlas 224016182 May 27 05:59 EVNT.44871834._002423.pool.root.1
[2025-05-27 10:54:16] -rw-r--r--. 2 boincer umatlas     15093 May 27 05:59 start_atlas.sh
[2025-05-27 10:54:16] drwxrwx--x. 2 boincer umatlas      4096 May 27 05:59 shared
[2025-05-27 10:54:16] -rw-r--r--. 2 boincer umatlas    508875 May 27 05:59 input.tar.gz
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas         0 May 27 05:59 boinc_lockfile
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas      2558 May 27 05:59 pandaJob.out
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas    990785 May 27 06:00 agis_schedconf.cvmfs.json
[2025-05-27 10:54:16] drwx------. 4 boincer umatlas      4096 May 27 06:00 pilot3
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas      6853 May 27 10:48 init_data.xml
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas 199977562 May 27 10:51 HITS.44871837._061408.pool.root.1
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas       531 May 27 10:52 boinc_task_state.xml
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas      1044 May 27 10:52 memory_monitor_summary.json
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas   1603667 May 27 10:53 agis_ddmendpoints.agis.ALL.json
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas    427967 May 27 10:53 log.44871837._061408.job.log.tgz.1
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas      7731 May 27 10:53 heartbeat.json
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas        95 May 27 10:53 pilot_heartbeat.json
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas      4539 May 27 10:53 pilotlog.txt
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas   1442046 May 27 10:53 log.44871837._061408.job.log.1
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas       357 May 27 10:53 output.list
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas       620 May 27 10:53 runtime_log
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas   1884160 May 27 10:53 result.tar.gz
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas      8665 May 27 10:53 runtime_log.err
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas       657 May 27 10:53 4dzKDmgyzd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqQYKDmxioHum.diag
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas        28 May 27 10:54 wrapper_checkpoint.txt
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas      8192 May 27 10:54 boinc_mmap_file
[2025-05-27 10:54:16] -rw-r--r--. 1 boincer umatlas     21028 May 27 10:54 stderr.txt
[2025-05-27 10:54:16] HITS file was successfully produced:
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas 199977562 May 27 10:51 shared/HITS.pool.root.1
[2025-05-27 10:54:16]  *** Contents of shared directory: ***
[2025-05-27 10:54:16] total 416424
[2025-05-27 10:54:16] -rw-r--r--. 2 boincer umatlas 224016182 May 27 05:59 ATLAS.root_0
[2025-05-27 10:54:16] -rw-r--r--. 2 boincer umatlas     15093 May 27 05:59 start_atlas.sh
[2025-05-27 10:54:16] -rw-r--r--. 2 boincer umatlas    508875 May 27 05:59 input.tar.gz
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas 199977562 May 27 10:51 HITS.pool.root.1
[2025-05-27 10:54:16] -rw-------. 1 boincer umatlas   1884160 May 27 10:53 result.tar.gz
10:54:17 (2597451): run_atlas exited; CPU time 55468.250094
10:54:17 (2597451): called boinc_finish(0)

</stderr_txt>
]]>

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