Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:39:29 (503885): wrapper (7.7.26015): starting
01:39:29 (503885): wrapper: running run_atlas (--nthreads 12)
[2025-05-27 01:39:29] Arguments: --nthreads 12
[2025-05-27 01:39:29] Threads: 12
[2025-05-27 01:39:29] Checking for CVMFS
[2025-05-27 01:39:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 01:39:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 01:39:29] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 01:39:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 01:39:30] 2.11.5.0 361037 12150 240316 146473 3 526 42298968 45568001 10107 130560 0 129636073 99.799 80255571 24902 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-27 01:39:30] CVMFS is ok
[2025-05-27 01:39:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 01:39:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 01:39:30] Further information can be found at the LHC@home message board.
[2025-05-27 01:39:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 01:39:30] Checking for apptainer binary...
[2025-05-27 01:39:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 01:39:30] Running /usr/bin/apptainer --version
[2025-05-27 01:39:30] apptainer version 1.4.0-1.el9
[2025-05-27 01:39:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 01:39:30] wns0026.triumf.lcg
[2025-05-27 01:39:30] apptainer works
[2025-05-27 01:39:30] Set ATHENA_PROC_NUMBER=12
[2025-05-27 01:39:30] Set ATHENA_CORE_NUMBER=12
[2025-05-27 01:39:30] Starting ATLAS job with PandaID=6666763935
[2025-05-27 01:39:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 01:42:29]  *** The last 200 lines of the pilot log: ***
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | found no stored workdir sizes
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | WARNING  | wrong length of table data, x=[1748335199.0], y=[1554.0] (must be same and length>=4)
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | ..............................
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . Timing measurements:
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . get job = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . initial setup = 2 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . payload setup = 3 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . stage-in = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . payload execution = 15 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . stage-out = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . log creation = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | ..............................
[2025-05-27 01:42:29] 2025-05-27 08:42:15,465 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 01:42:29] 2025-05-27 08:42:15,465 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666763935/pilotlog.txt
[2025-05-27 01:42:29] 2025-05-27 08:42:15,474 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-27 01:42:29] - Log from pilotlog.txt -
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | INFO     | extracted standard info from prmon json
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | found no stored workdir sizes
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | WARNING  | wrong length of table data, x=[1748335199.0], y=[1554.0] (must be same and length>=4)
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | ..............................
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . Timing measurements:
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . get job = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . initial setup = 2 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . payload setup = 3 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . stage-in = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . payload execution = 15 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . stage-out = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . log creation = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | ..............................
[2025-05-27 01:42:29] 2025-05-27 08:42:15,465 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 01:42:29] 2025-05-27 08:42:15,465 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666763935/pilotlog.txt
[2025-05-27 01:42:29] 2025-05-27 08:42:15,474 | WARNING  | 
[2025-05-27 01:42:29] [begin log extracts]
[2025-05-27 01:42:29] - Log from pilotlog.txt -
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | INFO     | extracted standard info from prmon json
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | WARNING  | found no stored workdir sizes
[2025-05-27 01:42:29] 2025-05-27 08:42:15,463 | INFO     | will not add max space = 0 B to job metrics
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | WARNING  | wrong length of table data, x=[1748335199.0], y=[1554.0] (must be same and length>=4)
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | ..............................
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . Timing measurements:
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . get job = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . initial setup = 2 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . payload setup = 3 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . stage-in = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . payload execution = 15 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . stage-out = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | . log creation = 0 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,464 | INFO     | ..............................
[2025-05-27 01:42:29] 2025-05-27 08:42:15,465 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-27 01:42:29] 2025-05-27 08:42:15,465 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6666763935/pilotlog.txt
[2025-05-27 01:42:29] [end log extracts]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,474 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-27 01:42:29] 2025-05-27 08:42:15,475 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-27 01:42:29] 2025-05-27 08:42:15,532 | INFO     | 
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | job summary report
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | --------------------------------------------------
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | PanDA job id: 6666763935
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | task id: 44871837
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-27 01:40:07,317 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | pilot state: failed 
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | transexitcode: 65
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | exeerrorcode: 65
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | exitcode: 65
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | cpuconsumptiontime: 15 s
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | nevents: 0
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | neventsw: 0
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | pid: 513755
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | pgrp: 513755
[2025-05-27 01:42:29] 2025-05-27 08:42:15,533 | INFO     | corecount: 12
[2025-05-27 01:42:29] 2025-05-27 08:42:15,534 | INFO     | event service: False
[2025-05-27 01:42:29] 2025-05-27 08:42:15,534 | INFO     | sizes: {0: 2405116, 1: 2405258, 3: 2405464, 11: 2405492, 22: 2428654, 23: 2432889, 24: 2433045, 143: 2433187}
[2025-05-27 01:42:29] 2025-05-27 08:42:15,534 | INFO     | --------------------------------------------------
[2025-05-27 01:42:29] 2025-05-27 08:42:15,534 | INFO     | 
[2025-05-27 01:42:29] 2025-05-27 08:42:15,534 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-27 01:42:29] 2025-05-27 08:42:15,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 01:42:29] 2025-05-27 08:42:15,549 | INFO     | job 6666763935 has completed (purged errors)
[2025-05-27 01:42:29] 2025-05-27 08:42:15,549 | INFO     | overall cleanup function is called
[2025-05-27 01:42:29] 2025-05-27 08:42:16,555 | INFO     | --- collectZombieJob: --- 10, [513755]
[2025-05-27 01:42:29] 2025-05-27 08:42:16,555 | INFO     | zombie collector waiting for pid 513755
[2025-05-27 01:42:29] 2025-05-27 08:42:16,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 01:42:29] 2025-05-27 08:42:16,555 | INFO     | collected zombie processes
[2025-05-27 01:42:29] 2025-05-27 08:42:16,555 | INFO     | will attempt to kill all subprocesses of pid=513755
[2025-05-27 01:42:29] 2025-05-27 08:42:16,691 | INFO     | process IDs to be killed: [513755] (in reverse order)
[2025-05-27 01:42:29] 2025-05-27 08:42:16,744 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 01:42:29] 2025-05-27 08:42:16,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 01:42:29] 2025-05-27 08:42:16,750 | INFO     | did not find any defunct processes belonging to 513755
[2025-05-27 01:42:29] 2025-05-27 08:42:16,754 | INFO     | did not find any defunct processes belonging to 513755
[2025-05-27 01:42:29] 2025-05-27 08:42:16,754 | INFO     | ready for new job
[2025-05-27 01:42:29] 2025-05-27 08:42:16,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 01:42:29] 2025-05-27 08:42:16,756 | INFO     | **************************************
[2025-05-27 01:42:29] 2025-05-27 08:42:16,756 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 01:42:29] 2025-05-27 08:42:16,756 | INFO     | **************************************
[2025-05-27 01:42:29] 2025-05-27 08:42:16,756 | INFO     | 
[2025-05-27 01:42:29] 2025-05-27 08:42:16,758 | INFO     | architecture information:
[2025-05-27 01:42:29] 2025-05-27 08:42:16,758 | INFO     | executing command: cat /etc/os-release
[2025-05-27 01:42:29] 2025-05-27 08:42:16,768 | INFO     | cat /etc/os-release:
[2025-05-27 01:42:29] NAME="CentOS Linux"
[2025-05-27 01:42:29] VERSION="7 (Core)"
[2025-05-27 01:42:29] ID="centos"
[2025-05-27 01:42:29] ID_LIKE="rhel fedora"
[2025-05-27 01:42:29] VERSION_ID="7"
[2025-05-27 01:42:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 01:42:29] ANSI_COLOR="0;31"
[2025-05-27 01:42:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 01:42:29] HOME_URL="https://www.centos.org/"
[2025-05-27 01:42:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 01:42:29] 
[2025-05-27 01:42:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 01:42:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 01:42:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 01:42:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 01:42:29] 
[2025-05-27 01:42:29] 2025-05-27 08:42:16,769 | INFO     | **************************************
[2025-05-27 01:42:29] 2025-05-27 08:42:17,271 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-27 01:42:29] 2025-05-27 08:42:17,282 | INFO     | sufficient remaining disk space (1965685735424 B)
[2025-05-27 01:42:29] 2025-05-27 08:42:17,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 01:42:29] 2025-05-27 08:42:17,282 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 01:42:29] 2025-05-27 08:42:17,283 | INFO     | update_server=False
[2025-05-27 01:42:29] 2025-05-27 08:42:17,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 01:42:29] 2025-05-27 08:42:17,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 01:42:29] 2025-05-27 08:42:17,380 | INFO     | all payload control threads have been joined
[2025-05-27 01:42:29] 2025-05-27 08:42:17,596 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-27 01:42:29] 2025-05-27 08:42:17,597 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-27 01:42:29] 2025-05-27 08:42:17,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 01:42:29] 2025-05-27 08:42:17,597 | INFO     | will abort loop
[2025-05-27 01:42:29] 2025-05-27 08:42:17,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 01:42:29] 2025-05-27 08:42:17,837 | INFO     | all data control threads have been joined
[2025-05-27 01:42:29] 2025-05-27 08:42:18,207 | INFO     | all job control threads have been joined
[2025-05-27 01:42:29] 2025-05-27 08:42:18,233 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 01:42:29] 2025-05-27 08:42:18,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 01:42:29] 2025-05-27 08:42:18,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 01:42:29] 2025-05-27 08:42:18,288 | INFO     | [job] retrieve thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,288 | INFO     | [job] queue monitor thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,385 | INFO     | [payload] control thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,602 | INFO     | [job] job monitor thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,602 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,657 | INFO     | [job] validate thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,674 | INFO     | [data] copytool_in thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,843 | INFO     | [data] control thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,852 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,862 | INFO     | [payload] failed_post thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:18,919 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:19,064 | INFO     | [payload] validate_post thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:19,212 | INFO     | [job] control thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:19,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 01:42:29] 2025-05-27 08:42:19,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:19,842 | INFO     | [data] copytool_out thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:23,409 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 01:42:29] 2025-05-27 08:42:24,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140545853212480)>', '<ExcThread(monitor, started 140545464715008)>']
[2025-05-27 01:42:29] 2025-05-27 08:42:25,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 01:42:29] 2025-05-27 08:42:25,268 | INFO     | [monitor] control thread has ended
[2025-05-27 01:42:29] 2025-05-27 08:42:29,562 | INFO     | all workflow threads have been joined
[2025-05-27 01:42:29] 2025-05-27 08:42:29,562 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 01:42:29] 2025-05-27 08:42:29,562 | INFO     | traces error code: 0
[2025-05-27 01:42:29] 2025-05-27 08:42:29,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 01:42:29] 2025-05-27 08:42:29,702 [wrapper] ==== pilot stdout END ====
[2025-05-27 01:42:29] 2025-05-27 08:42:29,704 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 01:42:29] 2025-05-27 08:42:29,706 [wrapper] pilotpid: 507455
[2025-05-27 01:42:29] 2025-05-27 08:42:29,708 [wrapper] Pilot exit status: 0
[2025-05-27 01:42:29] 2025-05-27 08:42:29,716 [wrapper] pandaids: 6666763935
[2025-05-27 01:42:29] 2025-05-27 08:42:29,750 [wrapper] cleanup supervisor_pilot  507461 507456
[2025-05-27 01:42:29] 2025-05-27 08:42:29,752 [wrapper] Test setup, not cleaning
[2025-05-27 01:42:29] 2025-05-27 08:42:29,754 [wrapper] apfmon messages muted
[2025-05-27 01:42:29] 2025-05-27 08:42:29,756 [wrapper] ==== wrapper stdout END ====
[2025-05-27 01:42:29] 2025-05-27 08:42:29,757 [wrapper] ==== wrapper stderr END ====
[2025-05-27 01:42:29]  *** Error codes and diagnostics ***
[2025-05-27 01:42:29]     "exeErrorCode": 65,
[2025-05-27 01:42:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 01:42:29]     "pilotErrorCode": 1305,
[2025-05-27 01:42:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-27 01:42:29]  *** Listing of results directory ***
[2025-05-27 01:42:29] total 221540
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc      5111 May 26 22:18 queuedata.json
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc    495897 May 26 22:18 pilot3.tar.gz
[2025-05-27 01:42:29] -rwx------. 1 boinc boinc     37140 May 26 22:20 runpilot2-wrapper.sh
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc       100 May 27 01:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 01:42:29] -rwxr-xr-x. 1 boinc boinc      7986 May 27 01:39 run_atlas
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc       105 May 27 01:39 job.xml
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc      6601 May 27 01:39 init_data.xml
[2025-05-27 01:42:29] -rw-r--r--. 2 boinc boinc 222828985 May 27 01:39 EVNT.44871834._002473.pool.root.1
[2025-05-27 01:42:29] -rw-r--r--. 2 boinc boinc     15093 May 27 01:39 start_atlas.sh
[2025-05-27 01:42:29] drwxrwx--x. 2 boinc boinc      4096 May 27 01:39 shared
[2025-05-27 01:42:29] -rw-r--r--. 2 boinc boinc    508880 May 27 01:39 input.tar.gz
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc         0 May 27 01:39 boinc_lockfile
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc      2558 May 27 01:39 pandaJob.out
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc    990419 May 27 01:39 agis_schedconf.cvmfs.json
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc   1603667 May 27 01:39 agis_ddmendpoints.agis.ALL.json
[2025-05-27 01:42:29] drwx------. 4 boinc boinc      4096 May 27 01:39 pilot3
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc       521 May 27 01:40 boinc_task_state.xml
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc       946 May 27 01:40 memory_monitor_summary.json
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc     20686 May 27 01:40 log.44871837._062672.job.log.tgz.1
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc        95 May 27 01:41 pilot_heartbeat.json
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc      8328 May 27 01:42 heartbeat.json
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc      8192 May 27 01:42 boinc_mmap_file
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc      4538 May 27 01:42 pilotlog.txt
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc        22 May 27 01:42 wrapper_checkpoint.txt
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc     72912 May 27 01:42 log.44871837._062672.job.log.1
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc       188 May 27 01:42 output.list
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc       620 May 27 01:42 runtime_log
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc    112640 May 27 01:42 result.tar.gz
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc      8484 May 27 01:42 runtime_log.err
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc       645 May 27 01:42 Lb4LDmvu1d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8dYKDml3Qpom.diag
[2025-05-27 01:42:29] -rw-r--r--. 1 boinc boinc     21460 May 27 01:42 stderr.txt
[2025-05-27 01:42:29] No HITS result produced
[2025-05-27 01:42:29]  *** Contents of shared directory: ***
[2025-05-27 01:42:29] total 218240
[2025-05-27 01:42:29] -rw-r--r--. 2 boinc boinc 222828985 May 27 01:39 ATLAS.root_0
[2025-05-27 01:42:29] -rw-r--r--. 2 boinc boinc     15093 May 27 01:39 start_atlas.sh
[2025-05-27 01:42:29] -rw-r--r--. 2 boinc boinc    508880 May 27 01:39 input.tar.gz
[2025-05-27 01:42:29] -rw-------. 1 boinc boinc    112640 May 27 01:42 result.tar.gz
01:42:31 (503885): run_atlas exited; CPU time 18.299305
01:42:31 (503885): called boinc_finish(0)

</stderr_txt>
]]>

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