Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:49:18 (1413): wrapper (7.7.26015): starting
19:49:18 (1413): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 19:49:18] Arguments: --nthreads 8
[2025-05-27 19:49:18] Threads: 8
[2025-05-27 19:49:18] Checking for CVMFS
[2025-05-27 19:49:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 19:49:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 19:49:19] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 19:49:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 19:49:20] 2.11.2.0 16148 22016 93464 146488 2 59 24019465 25165825 4172 130560 0 12653045 99.768 14250880 1719 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-27 19:49:20] CVMFS is ok
[2025-05-27 19:49:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 19:49:20] Checking for apptainer binary...
[2025-05-27 19:49:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 19:49:20] Running /usr/bin/apptainer --version
[2025-05-27 19:49:20] apptainer version 1.3.2-1.el7
[2025-05-27 19:49:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 19:49:30] cg-vwn372.simple-grid.lan
[2025-05-27 19:49:30] apptainer works
[2025-05-27 19:49:30] Set ATHENA_PROC_NUMBER=8
[2025-05-27 19:49:30] Set ATHENA_CORE_NUMBER=8
[2025-05-27 19:49:30] Starting ATLAS job with PandaID=6666595552
[2025-05-27 19:49:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 01:28:05]  *** The last 200 lines of the pilot log: ***
[2025-05-28 01:28:05] 2025-05-27 23:18:54,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 01:28:05] 2025-05-27 23:18:54,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 01:28:05] 2025-05-27 23:18:54,963 | INFO     | fitting pss+swap vs Time
[2025-05-28 01:28:05] 2025-05-27 23:18:54,964 | INFO     | sum of square deviations: 9417545878.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,967 | INFO     | sum of deviations: 187388194210.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,967 | INFO     | mean x: 1748378328.5
[2025-05-28 01:28:05] 2025-05-27 23:18:54,967 | INFO     | mean y: 2439163.237179487
[2025-05-28 01:28:05] 2025-05-27 23:18:54,968 | INFO     | -- intersect: -34786396698.86014
[2025-05-28 01:28:05] 2025-05-27 23:18:54,968 | INFO     | intersect: -34786396698.86014
[2025-05-28 01:28:05] 2025-05-27 23:18:54,968 | INFO     | chi2: 7.8911473341869645
[2025-05-28 01:28:05] 2025-05-27 23:18:54,969 | INFO     | sum of square deviations: 8971993338.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,972 | INFO     | sum of deviations: 205784419330.99994
[2025-05-28 01:28:05] 2025-05-27 23:18:54,972 | INFO     | mean x: 1748378176.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,972 | INFO     | mean y: 2445363.622149837
[2025-05-28 01:28:05] 2025-05-27 23:18:54,972 | INFO     | -- intersect: -40098898246.977936
[2025-05-28 01:28:05] 2025-05-27 23:18:54,972 | INFO     | intersect: -40098898246.977936
[2025-05-28 01:28:05] 2025-05-27 23:18:54,973 | INFO     | chi2: 7.105345204412212
[2025-05-28 01:28:05] 2025-05-27 23:18:54,973 | INFO     | current chi2=7.105345204412212 (change=9.958021267330885 %)
[2025-05-28 01:28:05] 2025-05-27 23:18:54,973 | INFO     | right removable region: 306
[2025-05-28 01:28:05] 2025-05-27 23:18:54,974 | INFO     | sum of square deviations: 8971993338.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,977 | INFO     | sum of deviations: 77965768960.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,977 | INFO     | mean x: 1748378481.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,978 | INFO     | mean y: 2476596.648208469
[2025-05-28 01:28:05] 2025-05-27 23:18:54,978 | INFO     | -- intersect: -15190766149.859251
[2025-05-28 01:28:05] 2025-05-27 23:18:54,978 | INFO     | intersect: -15190766149.859251
[2025-05-28 01:28:05] 2025-05-27 23:18:54,978 | INFO     | chi2: 3.0221058679329493
[2025-05-28 01:28:05] 2025-05-27 23:18:54,978 | INFO     | current chi2=3.0221058679329493 (change=61.70257961297689 %)
[2025-05-28 01:28:05] 2025-05-27 23:18:54,979 | INFO     | sum of square deviations: 8540720135.5
[2025-05-28 01:28:05] 2025-05-27 23:18:54,982 | INFO     | sum of deviations: 7674377761.499992
[2025-05-28 01:28:05] 2025-05-27 23:18:54,982 | INFO     | mean x: 1748378633.5
[2025-05-28 01:28:05] 2025-05-27 23:18:54,982 | INFO     | mean y: 2501389.930463576
[2025-05-28 01:28:05] 2025-05-27 23:18:54,982 | INFO     | -- intersect: -1568527503.5047188
[2025-05-28 01:28:05] 2025-05-27 23:18:54,983 | INFO     | intersect: -1568527503.5047188
[2025-05-28 01:28:05] 2025-05-27 23:18:54,983 | INFO     | chi2: 0.9993486362397397
[2025-05-28 01:28:05] 2025-05-27 23:18:54,983 | INFO     | current chi2=0.9993486362397397 (change=66.93204408079619 %)
[2025-05-28 01:28:05] 2025-05-27 23:18:54,984 | INFO     | sum of square deviations: 8123493708.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,987 | INFO     | sum of deviations: -5339268389.999998
[2025-05-28 01:28:05] 2025-05-27 23:18:54,987 | INFO     | mean x: 1748378786.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,987 | INFO     | mean y: 2506135.296296296
[2025-05-28 01:28:05] 2025-05-27 23:18:54,987 | INFO     | -- intersect: 1151650077.7164426
[2025-05-28 01:28:05] 2025-05-27 23:18:54,987 | INFO     | intersect: 1151650077.7164426
[2025-05-28 01:28:05] 2025-05-27 23:18:54,988 | INFO     | chi2: 0.9318141025570708
[2025-05-28 01:28:05] 2025-05-27 23:18:54,988 | INFO     | current chi2=0.9318141025570708 (change=6.757855190234899 %)
[2025-05-28 01:28:05] 2025-05-27 23:18:54,988 | INFO     | left removable region: 30
[2025-05-28 01:28:05] 2025-05-27 23:18:54,988 | INFO     | sum of square deviations: 6519285025.0
[2025-05-28 01:28:05] 2025-05-27 23:18:54,991 | INFO     | sum of deviations: 913408266.0000057
[2025-05-28 01:28:05] 2025-05-27 23:18:54,991 | INFO     | mean x: 1748379060.5
[2025-05-28 01:28:05] 2025-05-27 23:18:54,991 | INFO     | mean y: 2519402.7391304346
[2025-05-28 01:28:05] 2025-05-27 23:18:54,991 | INFO     | -- intersect: -242443638.42841294
[2025-05-28 01:28:05] 2025-05-27 23:18:54,991 | INFO     | intersect: -242443638.42841294
[2025-05-28 01:28:05] 2025-05-27 23:18:54,992 | INFO     | chi2: 0.007588509104663673
[2025-05-28 01:28:05] 2025-05-27 23:18:54,992 | INFO     | -- intersect: -242443638.42841294
[2025-05-28 01:28:05] 2025-05-27 23:18:54,992 | INFO     | current memory leak: 0.14 B/s (using 276 data points, chi2=0.01)
[2025-05-28 01:28:05] 2025-05-27 23:18:54,993 | INFO     | ..............................
[2025-05-28 01:28:05] 2025-05-27 23:18:54,993 | INFO     | . Timing measurements:
[2025-05-28 01:28:05] 2025-05-27 23:18:54,993 | INFO     | . get job = 0 s
[2025-05-28 01:28:05] 2025-05-27 23:18:54,994 | INFO     | . initial setup = 4 s
[2025-05-28 01:28:05] 2025-05-27 23:18:54,994 | INFO     | . payload setup = 157 s
[2025-05-28 01:28:05] 2025-05-27 23:18:54,994 | INFO     | . stage-in = 0 s
[2025-05-28 01:28:05] 2025-05-27 23:18:54,994 | INFO     | . payload execution = 19149 s
[2025-05-28 01:28:05] 2025-05-27 23:18:54,994 | INFO     | . stage-out = 1 s
[2025-05-28 01:28:05] 2025-05-27 23:18:54,994 | INFO     | . log creation = 0 s
[2025-05-28 01:28:05] 2025-05-27 23:18:54,994 | INFO     | ..............................
[2025-05-28 01:28:05] 2025-05-27 23:18:55,125 | INFO     | 
[2025-05-28 01:28:05] 2025-05-27 23:18:55,125 | INFO     | job summary report
[2025-05-28 01:28:05] 2025-05-27 23:18:55,125 | INFO     | --------------------------------------------------
[2025-05-28 01:28:05] 2025-05-27 23:18:55,125 | INFO     | PanDA job id: 6666595552
[2025-05-28 01:28:05] 2025-05-27 23:18:55,125 | INFO     | task id: 44871837
[2025-05-28 01:28:05] 2025-05-27 23:18:55,125 | INFO     | errors: (none)
[2025-05-28 01:28:05] 2025-05-27 23:18:55,125 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 01:28:05] 2025-05-27 23:18:55,125 | INFO     | pilot state: finished 
[2025-05-28 01:28:05] 2025-05-27 23:18:55,142 | INFO     | transexitcode: 0
[2025-05-28 01:28:05] 2025-05-27 23:18:55,142 | INFO     | exeerrorcode: 0
[2025-05-28 01:28:05] 2025-05-27 23:18:55,142 | INFO     | exeerrordiag: 
[2025-05-28 01:28:05] 2025-05-27 23:18:55,142 | INFO     | exitcode: 0
[2025-05-28 01:28:05] 2025-05-27 23:18:55,142 | INFO     | exitmsg: OK
[2025-05-28 01:28:05] 2025-05-27 23:18:55,142 | INFO     | cpuconsumptiontime: 71578 s
[2025-05-28 01:28:05] 2025-05-27 23:18:55,142 | INFO     | nevents: 400
[2025-05-28 01:28:05] 2025-05-27 23:18:55,143 | INFO     | neventsw: 0
[2025-05-28 01:28:05] 2025-05-27 23:18:55,143 | INFO     | pid: 19603
[2025-05-28 01:28:05] 2025-05-27 23:18:55,143 | INFO     | pgrp: 19603
[2025-05-28 01:28:05] 2025-05-27 23:18:55,143 | INFO     | corecount: 8
[2025-05-28 01:28:05] 2025-05-27 23:18:55,143 | INFO     | event service: False
[2025-05-28 01:28:05] 2025-05-27 23:18:55,143 | INFO     | sizes: {0: 2405064, 1: 2405263, 12: 2405263, 23: 2405291, 33: 2405319, 44: 2405375, 55: 2405531, 66: 2405559, 76: 2405587, 87: 2405643, 88: 2405877, 98: 2406185, 1
[2025-05-28 01:28:05] 2025-05-27 23:18:55,143 | INFO     | --------------------------------------------------
[2025-05-28 01:28:05] 2025-05-27 23:18:55,143 | INFO     | 
[2025-05-28 01:28:05] 2025-05-27 23:18:55,143 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-05-28 01:28:05] 2025-05-27 23:18:55,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,387 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 01:28:05] 2025-05-27 23:18:55,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,389 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 01:28:05] 2025-05-27 23:18:55,389 | INFO     | job 6666595552 has completed (purged errors)
[2025-05-28 01:28:05] 2025-05-27 23:18:55,389 | INFO     | overall cleanup function is called
[2025-05-28 01:28:05] 2025-05-27 23:18:56,398 | INFO     | --- collectZombieJob: --- 10, [19603]
[2025-05-28 01:28:05] 2025-05-27 23:18:56,398 | INFO     | zombie collector waiting for pid 19603
[2025-05-28 01:28:05] 2025-05-27 23:18:56,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 01:28:05] 2025-05-27 23:18:56,398 | INFO     | collected zombie processes
[2025-05-28 01:28:05] 2025-05-27 23:18:56,398 | INFO     | will attempt to kill all subprocesses of pid=19603
[2025-05-28 01:28:05] 2025-05-27 23:18:56,501 | INFO     | process IDs to be killed: [19603] (in reverse order)
[2025-05-28 01:28:05] 2025-05-27 23:18:57,125 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 01:28:05] 2025-05-27 23:18:57,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 01:28:05] 2025-05-27 23:18:57,128 | INFO     | did not find any defunct processes belonging to 19603
[2025-05-28 01:28:05] 2025-05-27 23:18:57,132 | INFO     | did not find any defunct processes belonging to 19603
[2025-05-28 01:28:05] 2025-05-27 23:18:57,133 | INFO     | ready for new job
[2025-05-28 01:28:05] 2025-05-27 23:18:57,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 01:28:05] 2025-05-27 23:18:57,135 | INFO     | **************************************
[2025-05-28 01:28:05] 2025-05-27 23:18:57,135 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 01:28:05] 2025-05-27 23:18:57,135 | INFO     | **************************************
[2025-05-28 01:28:05] 2025-05-27 23:18:57,135 | INFO     | 
[2025-05-28 01:28:05] 2025-05-27 23:18:57,136 | INFO     | pilot is running in a VM
[2025-05-28 01:28:05] 2025-05-27 23:18:57,136 | INFO     | architecture information:
[2025-05-28 01:28:05] 2025-05-27 23:18:57,146 | INFO     | executing command: cat /etc/os-release
[2025-05-28 01:28:05] 2025-05-27 23:18:57,273 | INFO     | cat /etc/os-release:
[2025-05-28 01:28:05] NAME="CentOS Linux"
[2025-05-28 01:28:05] VERSION="7 (Core)"
[2025-05-28 01:28:05] ID="centos"
[2025-05-28 01:28:05] ID_LIKE="rhel fedora"
[2025-05-28 01:28:05] VERSION_ID="7"
[2025-05-28 01:28:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 01:28:05] ANSI_COLOR="0;31"
[2025-05-28 01:28:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 01:28:05] HOME_URL="https://www.centos.org/"
[2025-05-28 01:28:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 01:28:05] 
[2025-05-28 01:28:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 01:28:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 01:28:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 01:28:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 01:28:05] 
[2025-05-28 01:28:05] 2025-05-27 23:18:57,273 | INFO     | **************************************
[2025-05-28 01:28:05] 2025-05-27 23:18:57,777 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-05-28 01:28:05] 2025-05-27 23:18:57,815 | INFO     | sufficient remaining disk space (494077476864 B)
[2025-05-28 01:28:05] 2025-05-27 23:18:57,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 01:28:05] 2025-05-27 23:18:57,816 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 01:28:05] 2025-05-27 23:18:57,816 | INFO     | update_server=False
[2025-05-28 01:28:05] 2025-05-27 23:18:57,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 01:28:05] 2025-05-27 23:18:57,817 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 01:28:05] 2025-05-27 23:18:57,817 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 01:28:05] 2025-05-27 23:18:57,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 01:28:05] 2025-05-27 23:18:57,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 01:28:05] 2025-05-27 23:18:58,171 | INFO     | all data control threads have been joined
[2025-05-28 01:28:05] 2025-05-27 23:18:58,201 | INFO     | all payload control threads have been joined
[2025-05-28 01:28:05] 2025-05-27 23:18:58,235 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 01:28:05] 2025-05-27 23:18:58,235 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 01:28:05] 2025-05-27 23:18:58,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 01:28:05] 2025-05-27 23:18:58,235 | INFO     | will abort loop
[2025-05-28 01:28:05] 2025-05-27 23:18:58,403 | INFO     | all job control threads have been joined
[2025-05-28 01:28:05] 2025-05-27 23:18:58,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 01:28:05] 2025-05-27 23:18:58,822 | INFO     | [job] retrieve thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,025 | INFO     | [job] validate thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,141 | INFO     | [data] copytool_in thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,177 | INFO     | [data] control thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,207 | INFO     | [payload] control thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,228 | INFO     | [payload] failed_post thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,241 | INFO     | [job] job monitor thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,409 | INFO     | [job] control thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,478 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,487 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,819 | INFO     | [payload] validate_post thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:18:59,879 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:19:00,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 01:28:05] 2025-05-27 23:19:00,635 | INFO     | [data] copytool_out thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:19:00,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 01:28:05] 2025-05-27 23:19:01,145 | INFO     | [job] queue monitor thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:19:04,899 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:19:08,412 | INFO     | job.realtimelogging is not enabled
[2025-05-28 01:28:05] 2025-05-27 23:19:09,418 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 01:28:05] 2025-05-27 23:19:09,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717011490624)>', '<ExcThread(monitor, started 140716349060864)>']
[2025-05-28 01:28:05] 2025-05-27 23:19:09,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 01:28:05] 2025-05-27 23:19:09,888 | INFO     | [monitor] control thread has ended
[2025-05-28 01:28:05] 2025-05-27 23:19:14,541 | INFO     | all workflow threads have been joined
[2025-05-28 01:28:05] 2025-05-27 23:19:14,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 01:28:05] 2025-05-27 23:19:14,541 | INFO     | traces error code: 0
[2025-05-28 01:28:05] 2025-05-27 23:19:14,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 01:28:05] 2025-05-27 23:19:14,866 [wrapper] ==== pilot stdout END ====
[2025-05-28 01:28:05] 2025-05-27 23:19:14,961 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 01:28:05] 2025-05-27 23:19:15,083 [wrapper] pilotpid: 12960
[2025-05-28 01:28:05] 2025-05-27 23:19:15,183 [wrapper] Pilot exit status: 0
[2025-05-28 01:28:05] 2025-05-27 23:19:15,608 [wrapper] pandaids: 6666595552
[2025-05-28 01:28:05] 2025-05-27 23:19:16,356 [wrapper] cleanup supervisor_pilot 22804 12961
[2025-05-28 01:28:05] 2025-05-27 23:19:16,411 [wrapper] Test setup, not cleaning
[2025-05-28 01:28:05] 2025-05-27 23:19:16,476 [wrapper] apfmon messages muted
[2025-05-28 01:28:05] 2025-05-27 23:19:16,548 [wrapper] ==== wrapper stdout END ====
[2025-05-28 01:28:05] 2025-05-27 23:19:16,627 [wrapper] ==== wrapper stderr END ====
[2025-05-28 01:28:05]  *** Error codes and diagnostics ***
[2025-05-28 01:28:05]     "exeErrorCode": 0,
[2025-05-28 01:28:05]     "exeErrorDiag": "",
[2025-05-28 01:28:05]     "pilotErrorCode": 0,
[2025-05-28 01:28:05]     "pilotErrorDiag": "",
[2025-05-28 01:28:05]  *** Listing of results directory ***
[2025-05-28 01:28:05] total 424548
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc    495897 May 27 03:12 pilot3.tar.gz
[2025-05-28 01:28:05] -rwx------. 1 boinc boinc     37140 May 27 03:54 runpilot2-wrapper.sh
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc      5111 May 27 03:54 queuedata.json
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc       100 May 27 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 01:28:05] -rwxr-xr-x. 1 boinc boinc      7986 May 27 19:49 run_atlas
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc       105 May 27 19:49 job.xml
[2025-05-28 01:28:05] -rw-r--r--. 2 boinc boinc 224113920 May 27 19:49 EVNT.44871834._002386.pool.root.1
[2025-05-28 01:28:05] -rw-r--r--. 2 boinc boinc     15093 May 27 19:49 start_atlas.sh
[2025-05-28 01:28:05] drwxrwx--x. 2 boinc boinc        68 May 27 19:49 shared
[2025-05-28 01:28:05] -rw-r--r--. 2 boinc boinc    508874 May 27 19:49 input.tar.gz
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc      6372 May 27 19:49 init_data.xml
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc         0 May 27 19:49 boinc_lockfile
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc      2559 May 27 19:49 pandaJob.out
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc    991119 May 27 19:52 agis_schedconf.cvmfs.json
[2025-05-28 01:28:05] drwx------. 4 boinc boinc      4096 May 27 19:52 pilot3
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc 202599867 May 28 01:15 HITS.44871837._060390.pool.root.1
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc       531 May 28 01:16 boinc_task_state.xml
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc      1015 May 28 01:17 memory_monitor_summary.json
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc   1603667 May 28 01:17 agis_ddmendpoints.agis.ALL.json
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc    428309 May 28 01:17 log.44871837._060390.job.log.tgz.1
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc        95 May 28 01:18 pilot_heartbeat.json
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc      7690 May 28 01:18 heartbeat.json
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc      4798 May 28 01:19 pilotlog.txt
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc   1668050 May 28 01:19 log.44871837._060390.job.log.1
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc       357 May 28 01:19 output.list
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc       620 May 28 01:19 runtime_log
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc   2119680 May 28 01:19 result.tar.gz
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc      8673 May 28 01:19 runtime_log.err
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc       657 May 28 01:19 p72KDmahyd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmg9QKDmRVKfVo.diag
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc      8192 May 28 01:28 boinc_mmap_file
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc        28 May 28 01:28 wrapper_checkpoint.txt
[2025-05-28 01:28:05] -rw-r--r--. 1 boinc boinc     20539 May 28 01:28 stderr.txt
[2025-05-28 01:28:05] HITS file was successfully produced:
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc 202599867 May 28 01:15 shared/HITS.pool.root.1
[2025-05-28 01:28:05]  *** Contents of shared directory: ***
[2025-05-28 01:28:05] total 419304
[2025-05-28 01:28:05] -rw-r--r--. 2 boinc boinc 224113920 May 27 19:49 ATLAS.root_0
[2025-05-28 01:28:05] -rw-r--r--. 2 boinc boinc     15093 May 27 19:49 start_atlas.sh
[2025-05-28 01:28:05] -rw-r--r--. 2 boinc boinc    508874 May 27 19:49 input.tar.gz
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc 202599867 May 28 01:15 HITS.pool.root.1
[2025-05-28 01:28:05] -rw-------. 1 boinc boinc   2119680 May 28 01:19 result.tar.gz
01:28:07 (1413): run_atlas exited; CPU time 71846.415844
01:28:07 (1413): called boinc_finish(0)

</stderr_txt>
]]>

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