Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:50:56 (1261871): wrapper (7.7.26015): starting
16:50:56 (1261871): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 16:50:56] Arguments: --nthreads 4
[2025-06-06 16:50:56] Threads: 4
[2025-06-06 16:50:56] Checking for CVMFS
[2025-06-06 16:50:56] No cvmfs_config command found, will try listing directly
[2025-06-06 16:50:56] CVMFS is ok
[2025-06-06 16:50:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 16:50:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 16:50:56] Further information can be found at the LHC@home message board.
[2025-06-06 16:50:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 16:50:56] Checking for apptainer binary...
[2025-06-06 16:50:56] which: no apptainer in ((null))
[2025-06-06 16:50:56] apptainer is not installed, using version from CVMFS
[2025-06-06 16:50:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 16:50:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-06 16:50:56] apptainer works
[2025-06-06 16:50:56] Set ATHENA_PROC_NUMBER=4
[2025-06-06 16:50:56] Set ATHENA_CORE_NUMBER=4
[2025-06-06 16:50:56] Starting ATLAS job with PandaID=6666594239
[2025-06-06 16:50:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 18:44:09]  *** The last 200 lines of the pilot log: ***
[2025-06-06 18:44:09] 2025-06-06 16:43:51,085 | INFO     | log transfer has been attempted: DONE
[2025-06-06 18:44:09] 2025-06-06 16:43:51,085 | INFO     | job 6666594239 has finished - writing final server update
[2025-06-06 18:44:09] 2025-06-06 16:43:51,085 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1259703/.job.ad'
[2025-06-06 18:44:09] 2025-06-06 16:43:51,085 | INFO     | total number of processed events: 400 (read)
[2025-06-06 18:44:09] 2025-06-06 16:43:51,087 | INFO     | executing command: lscpu
[2025-06-06 18:44:09] 2025-06-06 16:43:51,123 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 18:44:09] 2025-06-06 16:43:52,922 | INFO     | monitor loop #515: job 0:6666594239 is in state 'finished'
[2025-06-06 18:44:09] 2025-06-06 16:43:52,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 18:44:09] 2025-06-06 16:43:55,332 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 18:44:09] 2025-06-06 16:43:55,333 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6666594239/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 18:44:09] 2025-06-06 16:43:55,333 | INFO     | extracted standard info from prmon json
[2025-06-06 18:44:09] 2025-06-06 16:43:55,334 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 18:44:09] 2025-06-06 16:43:55,334 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 18:44:09] 2025-06-06 16:43:55,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 18:44:09] 2025-06-06 16:43:55,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 18:44:09] 2025-06-06 16:43:55,335 | INFO     | fitting pss+swap vs Time
[2025-06-06 18:44:09] 2025-06-06 16:43:55,335 | INFO     | sum of square deviations: 424045160.0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | sum of deviations: -8483092184.999999
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | mean x: 1749224840.0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | mean y: 2395129.5225225226
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | -- intersect: 34995921691.67424
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | intersect: 34995921691.67424
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | chi2: 1.3545067095804053
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | sum of square deviations: 369281342.5
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | sum of deviations: -7892887752.499999
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | mean x: 1749224687.5
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | mean y: 2396774.1226415094
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | -- intersect: 37389701583.163704
[2025-06-06 18:44:09] 2025-06-06 16:43:55,336 | INFO     | intersect: 37389701583.163704
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | chi2: 1.3505536342252404
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | current chi2=1.3505536342252404 (change=0.29184612576702856 %)
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | right removable region: 105
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | sum of square deviations: 369281342.5
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | sum of deviations: -16746574975.999996
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | mean x: 1749224992.5
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | mean y: 2417092.2075471696
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | -- intersect: 79328188842.4938
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | intersect: 79328188842.4938
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | chi2: 0.21373548460829284
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | current chi2=0.21373548460829284 (change=84.22041890995851 %)
[2025-06-06 18:44:09] 2025-06-06 16:43:55,337 | INFO     | sum of square deviations: 319447850.0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | sum of deviations: -11548285027.999998
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | mean x: 1749225145.0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | mean y: 2401158.4851485146
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | -- intersect: 63238233087.24793
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | intersect: 63238233087.24793
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | chi2: 0.18437984264726492
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | current chi2=0.18437984264726492 (change=13.734566356553845 %)
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | left removable region: 20
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | sum of square deviations: 190403570.0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | sum of deviations: -643504676.9999995
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | mean x: 1749225267.0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | mean y: 2362515.1764705884
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | -- intersect: 5914198309.227354
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | intersect: 5914198309.227354
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | chi2: 0.029024069149879685
[2025-06-06 18:44:09] 2025-06-06 16:43:55,338 | INFO     | -- intersect: 5914198309.227354
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | current memory leak: -3.38 B/s (using 85 data points, chi2=0.03)
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | ..............................
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | . Timing measurements:
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | . get job = 0 s
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | . initial setup = 1 s
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | . payload setup = 4 s
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | . stage-in = 0 s
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | . payload execution = 6741 s
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | . stage-out = 0 s
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | . log creation = 0 s
[2025-06-06 18:44:09] 2025-06-06 16:43:55,339 | INFO     | ..............................
[2025-06-06 18:44:09] 2025-06-06 16:43:55,383 | INFO     | 
[2025-06-06 18:44:09] 2025-06-06 16:43:55,383 | INFO     | job summary report
[2025-06-06 18:44:09] 2025-06-06 16:43:55,383 | INFO     | --------------------------------------------------
[2025-06-06 18:44:09] 2025-06-06 16:43:55,383 | INFO     | PanDA job id: 6666594239
[2025-06-06 18:44:09] 2025-06-06 16:43:55,383 | INFO     | task id: 44871837
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | errors: (none)
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | pilot state: finished 
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | transexitcode: 0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | exeerrorcode: 0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | exeerrordiag: 
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | exitcode: 0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | exitmsg: OK
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | cpuconsumptiontime: 26157 s
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | nevents: 400
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | neventsw: 0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | pid: 1272903
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | pgrp: 1272903
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | corecount: 4
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | event service: False
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | sizes: {0: 2397402, 3: 2397608, 11: 2397636, 6749: 2424805, 6750: 2433768, 6752: 2433824, 6758: 2434122}
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | --------------------------------------------------
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | 
[2025-06-06 18:44:09] 2025-06-06 16:43:55,384 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-06 18:44:09] 2025-06-06 16:43:55,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | job 6666594239 has completed (purged errors)
[2025-06-06 18:44:09] 2025-06-06 16:43:55,398 | INFO     | overall cleanup function is called
[2025-06-06 18:44:09] 2025-06-06 16:43:56,405 | INFO     | --- collectZombieJob: --- 10, [1272903]
[2025-06-06 18:44:09] 2025-06-06 16:43:56,405 | INFO     | zombie collector waiting for pid 1272903
[2025-06-06 18:44:09] 2025-06-06 16:43:56,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 18:44:09] 2025-06-06 16:43:56,405 | INFO     | collected zombie processes
[2025-06-06 18:44:09] 2025-06-06 16:43:56,405 | INFO     | will attempt to kill all subprocesses of pid=1272903
[2025-06-06 18:44:09] 2025-06-06 16:43:56,521 | INFO     | process IDs to be killed: [1272903] (in reverse order)
[2025-06-06 18:44:09] 2025-06-06 16:43:56,570 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 18:44:09] 2025-06-06 16:43:56,570 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 18:44:09] 2025-06-06 16:43:56,575 | INFO     | did not find any defunct processes belonging to 1272903
[2025-06-06 18:44:09] 2025-06-06 16:43:56,578 | INFO     | did not find any defunct processes belonging to 1272903
[2025-06-06 18:44:09] 2025-06-06 16:43:56,579 | INFO     | ready for new job
[2025-06-06 18:44:09] 2025-06-06 16:43:56,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 18:44:09] 2025-06-06 16:43:56,580 | INFO     | **************************************
[2025-06-06 18:44:09] 2025-06-06 16:43:56,580 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 18:44:09] 2025-06-06 16:43:56,580 | INFO     | **************************************
[2025-06-06 18:44:09] 2025-06-06 16:43:56,580 | INFO     | 
[2025-06-06 18:44:09] 2025-06-06 16:43:56,582 | INFO     | architecture information:
[2025-06-06 18:44:09] 2025-06-06 16:43:56,582 | INFO     | executing command: cat /etc/os-release
[2025-06-06 18:44:09] 2025-06-06 16:43:56,591 | INFO     | cat /etc/os-release:
[2025-06-06 18:44:09] NAME="CentOS Linux"
[2025-06-06 18:44:09] VERSION="7 (Core)"
[2025-06-06 18:44:09] ID="centos"
[2025-06-06 18:44:09] ID_LIKE="rhel fedora"
[2025-06-06 18:44:09] VERSION_ID="7"
[2025-06-06 18:44:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 18:44:09] ANSI_COLOR="0;31"
[2025-06-06 18:44:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 18:44:09] HOME_URL="https://www.centos.org/"
[2025-06-06 18:44:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 18:44:09] 
[2025-06-06 18:44:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 18:44:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 18:44:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 18:44:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 18:44:09] 
[2025-06-06 18:44:09] 2025-06-06 16:43:56,591 | INFO     | **************************************
[2025-06-06 18:44:09] 2025-06-06 16:43:57,094 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-06 18:44:09] 2025-06-06 16:43:57,103 | INFO     | sufficient remaining disk space (717902315520 B)
[2025-06-06 18:44:09] 2025-06-06 16:43:57,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 18:44:09] 2025-06-06 16:43:57,104 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 18:44:09] 2025-06-06 16:43:57,104 | INFO     | update_server=False
[2025-06-06 18:44:09] 2025-06-06 16:43:57,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 18:44:09] 2025-06-06 16:43:57,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:44:09] 2025-06-06 16:43:57,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:44:09] 2025-06-06 16:43:57,104 | INFO     | aborting loop
[2025-06-06 18:44:09] 2025-06-06 16:43:57,284 | INFO     | all data control threads have been joined
[2025-06-06 18:44:09] 2025-06-06 16:43:57,295 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 18:44:09] 2025-06-06 16:43:57,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 18:44:09] 2025-06-06 16:43:57,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 18:44:09] 2025-06-06 16:43:58,042 | INFO     | all payload control threads have been joined
[2025-06-06 18:44:09] 2025-06-06 16:43:58,109 | INFO     | [job] retrieve thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:58,110 | INFO     | [job] queue monitor thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:58,110 | INFO     | [job] job monitor thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:58,188 | INFO     | all job control threads have been joined
[2025-06-06 18:44:09] 2025-06-06 16:43:58,289 | INFO     | [data] control thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:58,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 18:44:09] 2025-06-06 16:43:58,743 | INFO     | [payload] validate_post thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:58,952 | INFO     | [data] copytool_in thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:59,006 | INFO     | [job] validate thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:59,026 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:59,047 | INFO     | [payload] control thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:59,170 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:59,187 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:59,191 | INFO     | [job] control thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:59,466 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:43:59,620 | INFO     | [payload] failed_post thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:44:00,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 18:44:09] 2025-06-06 16:44:00,446 | INFO     | [data] copytool_out thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:44:04,119 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 18:44:09] 2025-06-06 16:44:04,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22630137415488)>', '<ExcThread(monitor, started 22629899536128)>']
[2025-06-06 18:44:09] 2025-06-06 16:44:05,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 18:44:09] 2025-06-06 16:44:05,336 | INFO     | [monitor] control thread has ended
[2025-06-06 18:44:09] 2025-06-06 16:44:09,664 | INFO     | all workflow threads have been joined
[2025-06-06 18:44:09] 2025-06-06 16:44:09,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 18:44:09] 2025-06-06 16:44:09,665 | INFO     | traces error code: 0
[2025-06-06 18:44:09] 2025-06-06 16:44:09,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 18:44:09] 2025-06-06 16:44:09,740 [wrapper] ==== pilot stdout END ====
[2025-06-06 18:44:09] 2025-06-06 16:44:09,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 18:44:09] 2025-06-06 16:44:09,744 [wrapper] pilotpid: 1265937
[2025-06-06 18:44:09] 2025-06-06 16:44:09,746 [wrapper] Pilot exit status: 0
[2025-06-06 18:44:09] 2025-06-06 16:44:09,753 [wrapper] pandaids: 6666594239
[2025-06-06 18:44:09] 2025-06-06 16:44:09,784 [wrapper] cleanup supervisor_pilot 1379138 1265938
[2025-06-06 18:44:09] 2025-06-06 16:44:09,786 [wrapper] Test setup, not cleaning
[2025-06-06 18:44:09] 2025-06-06 16:44:09,788 [wrapper] apfmon messages muted
[2025-06-06 18:44:09] 2025-06-06 16:44:09,789 [wrapper] ==== wrapper stdout END ====
[2025-06-06 18:44:09] 2025-06-06 16:44:09,791 [wrapper] ==== wrapper stderr END ====
[2025-06-06 18:44:09]  *** Error codes and diagnostics ***
[2025-06-06 18:44:09]     "exeErrorCode": 0,
[2025-06-06 18:44:09]     "exeErrorDiag": "",
[2025-06-06 18:44:09]     "pilotErrorCode": 0,
[2025-06-06 18:44:09]     "pilotErrorDiag": "",
[2025-06-06 18:44:09]  *** Listing of results directory ***
[2025-06-06 18:44:09] total 781440
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc    495897 May 27 02:11 pilot3.tar.gz
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc      5111 May 27 02:56 queuedata.json
[2025-06-06 18:44:09] -rwx------ 1 boinc boinc     37140 May 27 02:57 runpilot2-wrapper.sh
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc       100 Jun  2 10:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 18:44:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  2 10:37 run_atlas
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc       105 Jun  2 10:37 job.xml
[2025-06-06 18:44:09] -rw------- 2 boinc boinc 175374336 Jun  2 10:45 copy_xcy4ko
[2025-06-06 18:44:09] -rw------- 2 boinc boinc 133890048 Jun  3 04:25 copy_lHJOjQ
[2025-06-06 18:44:09] -rw------- 2 boinc boinc  62128128 Jun  5 10:32 copy_mTGhNR
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc      6635 Jun  6 16:50 init_data.xml
[2025-06-06 18:44:09] -rw-r--r-- 2 boinc boinc 226356479 Jun  6 16:50 EVNT.44871834._002358.pool.root.1
[2025-06-06 18:44:09] drwxrwx--x 2 boinc boinc      4096 Jun  6 16:50 shared
[2025-06-06 18:44:09] -rw-r--r-- 2 boinc boinc    508877 Jun  6 16:50 input.tar.gz
[2025-06-06 18:44:09] -rw-r--r-- 2 boinc boinc     15093 Jun  6 16:50 start_atlas.sh
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc         0 Jun  6 16:50 boinc_lockfile
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc      2558 Jun  6 16:50 pandaJob.out
[2025-06-06 18:44:09] -rw------- 1 boinc boinc    985728 Jun  6 16:51 agis_schedconf.cvmfs.json
[2025-06-06 18:44:09] -rw------- 1 boinc boinc   1598969 Jun  6 16:51 agis_ddmendpoints.agis.ALL.json
[2025-06-06 18:44:09] drwx------ 4 boinc boinc      4096 Jun  6 16:51 pilot3
[2025-06-06 18:44:09] -rw------- 1 boinc boinc        95 Jun  6 18:43 pilot_heartbeat.json
[2025-06-06 18:44:09] -rw------- 1 boinc boinc 196737290 Jun  6 18:43 HITS.44871837._059692.pool.root.1
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc      8192 Jun  6 18:43 boinc_mmap_file
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc        27 Jun  6 18:43 wrapper_checkpoint.txt
[2025-06-06 18:44:09] -rw------- 1 boinc boinc      1045 Jun  6 18:43 memory_monitor_summary.json
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc       530 Jun  6 18:43 boinc_task_state.xml
[2025-06-06 18:44:09] -rw------- 1 boinc boinc    265195 Jun  6 18:43 log.44871837._059692.job.log.tgz.1
[2025-06-06 18:44:09] -rw------- 1 boinc boinc      7724 Jun  6 18:43 heartbeat.json
[2025-06-06 18:44:09] -rw------- 1 boinc boinc      4363 Jun  6 18:44 pilotlog.txt
[2025-06-06 18:44:09] -rw------- 1 boinc boinc    665482 Jun  6 18:44 log.44871837._059692.job.log.1
[2025-06-06 18:44:09] -rw------- 1 boinc boinc       357 Jun  6 18:44 output.list
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc       620 Jun  6 18:44 runtime_log
[2025-06-06 18:44:09] -rw------- 1 boinc boinc    952320 Jun  6 18:44 result.tar.gz
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc      9025 Jun  6 18:44 runtime_log.err
[2025-06-06 18:44:09] -rw------- 1 boinc boinc       660 Jun  6 18:44 YIFODmAoxd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX7XKDmFOtvDo.diag
[2025-06-06 18:44:09] -rw-r--r-- 1 boinc boinc     20912 Jun  6 18:44 stderr.txt
[2025-06-06 18:44:09] HITS file was successfully produced:
[2025-06-06 18:44:09] -rw------- 1 boinc boinc 196737290 Jun  6 18:43 shared/HITS.pool.root.1
[2025-06-06 18:44:09]  *** Contents of shared directory: ***
[2025-06-06 18:44:09] total 777336
[2025-06-06 18:44:09] -rw------- 2 boinc boinc 175374336 Jun  2 10:45 copy_xcy4ko
[2025-06-06 18:44:09] -rw------- 2 boinc boinc 133890048 Jun  3 04:25 copy_lHJOjQ
[2025-06-06 18:44:09] -rw------- 2 boinc boinc  62128128 Jun  5 10:32 copy_mTGhNR
[2025-06-06 18:44:09] -rw-r--r-- 2 boinc boinc 226356479 Jun  6 16:50 ATLAS.root_0
[2025-06-06 18:44:09] -rw-r--r-- 2 boinc boinc    508877 Jun  6 16:50 input.tar.gz
[2025-06-06 18:44:09] -rw-r--r-- 2 boinc boinc     15093 Jun  6 16:50 start_atlas.sh
[2025-06-06 18:44:09] -rw------- 1 boinc boinc 196737290 Jun  6 18:43 HITS.pool.root.1
[2025-06-06 18:44:09] -rw------- 1 boinc boinc    952320 Jun  6 18:44 result.tar.gz
18:44:11 (1261871): run_atlas exited; CPU time 26263.367922
18:44:11 (1261871): called boinc_finish(0)

</stderr_txt>
]]>

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