Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
06:20:05 (822357): wrapper (7.7.26015): starting
06:20:05 (822357): wrapper: running run_atlas (--nthreads 4)
[2025-05-28 06:20:05] Arguments: --nthreads 4
[2025-05-28 06:20:05] Threads: 4
[2025-05-28 06:20:05] Checking for CVMFS
[2025-05-28 06:20:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 06:20:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 06:20:05] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 06:20:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 06:20:05] 2.12.7.0 14849 11880 45344 146504 2 55 26934015 33554433 0 130560 0 4079594 99.987 1442433 1625 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2025-05-28 06:20:05] CVMFS is ok
[2025-05-28 06:20:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 06:20:05] Checking for apptainer binary...
[2025-05-28 06:20:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 06:20:05] Running /usr/bin/apptainer --version
[2025-05-28 06:20:05] apptainer version 1.4.0
[2025-05-28 06:20:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 06:20:05] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2025-05-28 06:20:05] apptainer works
[2025-05-28 06:20:05] Set ATHENA_PROC_NUMBER=4
[2025-05-28 06:20:05] Set ATHENA_CORE_NUMBER=4
[2025-05-28 06:20:05] Starting ATLAS job with PandaID=6666579701
[2025-05-28 06:20:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 07:40:29]  *** The last 200 lines of the pilot log: ***
[2025-05-28 07:40:29]  filetype=log
[2025-05-28 07:40:29]  guid=5eab9af9-9837-4da6-9385-0bb8fb9deb20
[2025-05-28 07:40:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-28 07:40:29]  is_altstaged=None
[2025-05-28 07:40:29]  is_tar=False
[2025-05-28 07:40:29]  lfn=log.44871837._059476.job.log.tgz.1
[2025-05-28 07:40:29]  mtime=0
[2025-05-28 07:40:29]  protocol_id=None
[2025-05-28 07:40:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-28 07:40:29]  replicas=None
[2025-05-28 07:40:29]  scope=mc23_13p6TeV
[2025-05-28 07:40:29]  status=None
[2025-05-28 07:40:29]  status_code=0
[2025-05-28 07:40:29]  storage_token=
[2025-05-28 07:40:29]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6666579701/log.44871837._059476.job.log.tgz.1
[2025-05-28 07:40:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/41/log.44871837._059476.job.log.tgz.1
[2025-05-28 07:40:29]  workdir=None
[2025-05-28 07:40:29] ]
[2025-05-28 07:40:29] 2025-05-28 04:40:09,585 | INFO     | transferring file log.44871837._059476.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6666579701/log.44871837._059476.job.log.tgz.1 to /home/ek/BOINC/slots/
[2025-05-28 07:40:29] 2025-05-28 04:40:09,585 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6666579701/log.44871837._059476.job.log.tgz.1 /home/ek/BOINC/slots/1/log.44871837._059476.job
[2025-05-28 07:40:29] 2025-05-28 04:40:09,595 | INFO     | adding to output.list: log.44871837._059476.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/41/log.44871837._059476.job.log.tg
[2025-05-28 07:40:29] 2025-05-28 04:40:09,595 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-28 07:40:29] 2025-05-28 04:40:09,595 | INFO     | summary of transferred files:
[2025-05-28 07:40:29] 2025-05-28 04:40:09,595 | INFO     |  -- lfn=log.44871837._059476.job.log.tgz.1, status_code=0, status=transferred
[2025-05-28 07:40:29] 2025-05-28 04:40:09,595 | INFO     | stage-out finished correctly
[2025-05-28 07:40:29] 2025-05-28 04:40:12,789 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-28 07:40:29] 2025-05-28 04:40:13,041 | WARNING  | process 832804 can no longer be monitored (due to stat problems) - aborting
[2025-05-28 07:40:29] 2025-05-28 04:40:13,041 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6666579701/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 07:40:29] 2025-05-28 04:40:13,148 | INFO     | number of running child processes to parent process 832804: 1
[2025-05-28 07:40:29] 2025-05-28 04:40:13,148 | INFO     | maximum number of monitored processes: 6
[2025-05-28 07:40:29] 2025-05-28 04:40:15,143 | INFO     | job 6666579701 has state=finished
[2025-05-28 07:40:29] 2025-05-28 04:40:15,143 | INFO     | preparing for final server update for job 6666579701 in state='finished'
[2025-05-28 07:40:29] 2025-05-28 04:40:15,143 | INFO     | this job has now completed (state=finished)
[2025-05-28 07:40:29] 2025-05-28 04:40:15,143 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-28 07:40:29] 2025-05-28 04:40:15,144 | INFO     | log transfer has been attempted: DONE
[2025-05-28 07:40:29] 2025-05-28 04:40:15,144 | INFO     | job 6666579701 has finished - writing final server update
[2025-05-28 07:40:29] 2025-05-28 04:40:15,144 | INFO     | total number of processed events: 400 (read)
[2025-05-28 07:40:29] 2025-05-28 04:40:15,145 | INFO     | executing command: lscpu
[2025-05-28 07:40:29] 2025-05-28 04:40:15,161 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-28 07:40:29] 2025-05-28 04:40:15,651 | INFO     | monitor loop #366: job 0:6666579701 is in state 'finished'
[2025-05-28 07:40:29] 2025-05-28 04:40:15,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 07:40:29] 2025-05-28 04:40:17,330 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-28 07:40:29] 2025-05-28 04:40:17,330 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6666579701/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 07:40:29] 2025-05-28 04:40:17,330 | INFO     | extracted standard info from prmon json
[2025-05-28 07:40:29] 2025-05-28 04:40:17,330 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 07:40:29] 2025-05-28 04:40:17,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 07:40:29] 2025-05-28 04:40:17,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 07:40:29] 2025-05-28 04:40:17,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | fitting pss+swap vs Time
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | sum of square deviations: 115723169.8750001
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | sum of deviations: -12690843897.750002
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | mean x: 1748404900.5416667
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | mean y: 2664359.5833333335
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | -- intersect: 191742431657.7213
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | intersect: 191742431657.7213
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | chi2: 0.15640040798525373
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | -- intersect: 191742431657.7213
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | current memory leak: -109.67 B/s (using 72 data points, chi2=0.16)
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | ..............................
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | . Timing measurements:
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | . get job = 0 s
[2025-05-28 07:40:29] 2025-05-28 04:40:17,332 | INFO     | . initial setup = 1 s
[2025-05-28 07:40:29] 2025-05-28 04:40:17,333 | INFO     | . payload setup = 3 s
[2025-05-28 07:40:29] 2025-05-28 04:40:17,333 | INFO     | . stage-in = 0 s
[2025-05-28 07:40:29] 2025-05-28 04:40:17,333 | INFO     | . payload execution = 4777 s
[2025-05-28 07:40:29] 2025-05-28 04:40:17,333 | INFO     | . stage-out = 0 s
[2025-05-28 07:40:29] 2025-05-28 04:40:17,333 | INFO     | . log creation = 0 s
[2025-05-28 07:40:29] 2025-05-28 04:40:17,333 | INFO     | ..............................
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | 
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | job summary report
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | --------------------------------------------------
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | PanDA job id: 6666579701
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | task id: 44871837
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | errors: (none)
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | pilot state: finished 
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | transexitcode: 0
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | exeerrorcode: 0
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | exeerrordiag: 
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | exitcode: 0
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | exitmsg: OK
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | cpuconsumptiontime: 18184 s
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | nevents: 400
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | neventsw: 0
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | pid: 832804
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | pgrp: 832804
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | corecount: 4
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | event service: False
[2025-05-28 07:40:29] 2025-05-28 04:40:17,468 | INFO     | sizes: {0: 2405233, 2: 2405439, 11: 2405467, 4784: 2431727, 4786: 2440668, 4789: 2440724, 4793: 2441022}
[2025-05-28 07:40:29] 2025-05-28 04:40:17,469 | INFO     | --------------------------------------------------
[2025-05-28 07:40:29] 2025-05-28 04:40:17,469 | INFO     | 
[2025-05-28 07:40:29] 2025-05-28 04:40:17,469 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | job 6666579701 has completed (purged errors)
[2025-05-28 07:40:29] 2025-05-28 04:40:17,480 | INFO     | overall cleanup function is called
[2025-05-28 07:40:29] 2025-05-28 04:40:18,487 | INFO     | --- collectZombieJob: --- 10, [832804]
[2025-05-28 07:40:29] 2025-05-28 04:40:18,487 | INFO     | zombie collector waiting for pid 832804
[2025-05-28 07:40:29] 2025-05-28 04:40:18,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 07:40:29] 2025-05-28 04:40:18,487 | INFO     | collected zombie processes
[2025-05-28 07:40:29] 2025-05-28 04:40:18,487 | INFO     | will attempt to kill all subprocesses of pid=832804
[2025-05-28 07:40:29] 2025-05-28 04:40:18,593 | INFO     | process IDs to be killed: [832804] (in reverse order)
[2025-05-28 07:40:29] 2025-05-28 04:40:18,628 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 07:40:29] 2025-05-28 04:40:18,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 07:40:29] 2025-05-28 04:40:18,631 | INFO     | did not find any defunct processes belonging to 832804
[2025-05-28 07:40:29] 2025-05-28 04:40:18,633 | INFO     | did not find any defunct processes belonging to 832804
[2025-05-28 07:40:29] 2025-05-28 04:40:18,633 | INFO     | ready for new job
[2025-05-28 07:40:29] 2025-05-28 04:40:18,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 07:40:29] 2025-05-28 04:40:18,634 | INFO     | **************************************
[2025-05-28 07:40:29] 2025-05-28 04:40:18,634 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 07:40:29] 2025-05-28 04:40:18,634 | INFO     | **************************************
[2025-05-28 07:40:29] 2025-05-28 04:40:18,634 | INFO     | 
[2025-05-28 07:40:29] 2025-05-28 04:40:18,635 | INFO     | architecture information:
[2025-05-28 07:40:29] 2025-05-28 04:40:18,635 | INFO     | executing command: cat /etc/os-release
[2025-05-28 07:40:29] 2025-05-28 04:40:18,642 | INFO     | cat /etc/os-release:
[2025-05-28 07:40:29] NAME="CentOS Linux"
[2025-05-28 07:40:29] VERSION="7 (Core)"
[2025-05-28 07:40:29] ID="centos"
[2025-05-28 07:40:29] ID_LIKE="rhel fedora"
[2025-05-28 07:40:29] VERSION_ID="7"
[2025-05-28 07:40:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 07:40:29] ANSI_COLOR="0;31"
[2025-05-28 07:40:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 07:40:29] HOME_URL="https://www.centos.org/"
[2025-05-28 07:40:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 07:40:29] 
[2025-05-28 07:40:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 07:40:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 07:40:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 07:40:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 07:40:29] 
[2025-05-28 07:40:29] 2025-05-28 04:40:18,643 | INFO     | **************************************
[2025-05-28 07:40:29] 2025-05-28 04:40:19,145 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2025-05-28 07:40:29] 2025-05-28 04:40:19,154 | INFO     | sufficient remaining disk space (135071268864 B)
[2025-05-28 07:40:29] 2025-05-28 04:40:19,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 07:40:29] 2025-05-28 04:40:19,154 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 07:40:29] 2025-05-28 04:40:19,154 | INFO     | update_server=False
[2025-05-28 07:40:29] 2025-05-28 04:40:19,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 07:40:29] 2025-05-28 04:40:19,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 07:40:29] 2025-05-28 04:40:19,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 07:40:29] 2025-05-28 04:40:19,159 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 07:40:29] 2025-05-28 04:40:19,159 | INFO     | aborting loop
[2025-05-28 07:40:29] 2025-05-28 04:40:19,520 | INFO     | all payload control threads have been joined
[2025-05-28 07:40:29] 2025-05-28 04:40:19,566 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 07:40:29] 2025-05-28 04:40:19,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 07:40:29] 2025-05-28 04:40:19,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 07:40:29] 2025-05-28 04:40:19,776 | INFO     | all data control threads have been joined
[2025-05-28 07:40:29] 2025-05-28 04:40:20,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 07:40:29] 2025-05-28 04:40:20,160 | INFO     | [job] job monitor thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:20,160 | INFO     | [job] retrieve thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:20,160 | INFO     | [job] queue monitor thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:20,185 | INFO     | [payload] validate_post thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:20,256 | INFO     | all job control threads have been joined
[2025-05-28 07:40:29] 2025-05-28 04:40:20,316 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:20,339 | INFO     | [payload] failed_post thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:20,523 | INFO     | [payload] control thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:20,725 | INFO     | [data] copytool_in thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:20,781 | INFO     | [data] control thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:20,944 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:21,261 | INFO     | [job] control thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:21,481 | INFO     | [job] validate thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:21,569 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:21,638 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:22,143 | INFO     | [data] copytool_out thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:23,160 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 07:40:29] 2025-05-28 04:40:23,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165934929728)>', '<ExcThread(monitor, started 140165284607744)>']
[2025-05-28 07:40:29] 2025-05-28 04:40:24,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 07:40:29] 2025-05-28 04:40:24,590 | INFO     | [monitor] control thread has ended
[2025-05-28 07:40:29] 2025-05-28 04:40:28,955 | INFO     | all workflow threads have been joined
[2025-05-28 07:40:29] 2025-05-28 04:40:28,955 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 07:40:29] 2025-05-28 04:40:28,955 | INFO     | traces error code: 0
[2025-05-28 07:40:29] 2025-05-28 04:40:28,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 07:40:29] 2025-05-28 04:40:29,009 [wrapper] ==== pilot stdout END ====
[2025-05-28 07:40:29] 2025-05-28 04:40:29,011 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 07:40:29] 2025-05-28 04:40:29,013 [wrapper] pilotpid: 826085
[2025-05-28 07:40:29] 2025-05-28 04:40:29,015 [wrapper] Pilot exit status: 0
[2025-05-28 07:40:29] 2025-05-28 04:40:29,021 [wrapper] pandaids: 6666579701
[2025-05-28 07:40:29] 2025-05-28 04:40:29,044 [wrapper] cleanup supervisor_pilot  889985 826086
[2025-05-28 07:40:29] 2025-05-28 04:40:29,045 [wrapper] Test setup, not cleaning
[2025-05-28 07:40:29] 2025-05-28 04:40:29,047 [wrapper] apfmon messages muted
[2025-05-28 07:40:29] 2025-05-28 04:40:29,048 [wrapper] ==== wrapper stdout END ====
[2025-05-28 07:40:29] 2025-05-28 04:40:29,049 [wrapper] ==== wrapper stderr END ====
[2025-05-28 07:40:29]  *** Error codes and diagnostics ***
[2025-05-28 07:40:29]     "exeErrorCode": 0,
[2025-05-28 07:40:29]     "exeErrorDiag": "",
[2025-05-28 07:40:29]     "pilotErrorCode": 0,
[2025-05-28 07:40:29]     "pilotErrorDiag": "",
[2025-05-28 07:40:29]  *** Listing of results directory ***
[2025-05-28 07:40:29] total 429008
[2025-05-28 07:40:29] -rw-r--r-- 1 ek ek    495897 May 27 03:11 pilot3.tar.gz
[2025-05-28 07:40:29] -rw-r--r-- 1 ek ek      5111 May 27 03:34 queuedata.json
[2025-05-28 07:40:29] -rwx------ 1 ek ek     37140 May 27 03:35 runpilot2-wrapper.sh
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek       100 May 28 06:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 07:40:29] -rwxr-xr-x 1 ek ek      7986 May 28 06:20 run_atlas
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek       105 May 28 06:20 job.xml
[2025-05-28 07:40:29] -rw-r--r-- 2 ek ek 227369534 May 28 06:20 EVNT.44871834._002350.pool.root.1
[2025-05-28 07:40:29] -rw-r--r-- 2 ek ek    508876 May 28 06:20 input.tar.gz
[2025-05-28 07:40:29] -rw-r--r-- 2 ek ek     15093 May 28 06:20 start_atlas.sh
[2025-05-28 07:40:29] drwxrwx--x 2 ek ek      4096 May 28 06:20 shared
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek         0 May 28 06:20 boinc_setup_complete
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek      9842 May 28 06:20 init_data.xml
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek         0 May 28 06:20 boinc_lockfile
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek      2558 May 28 06:20 pandaJob.out
[2025-05-28 07:40:29] -rw------- 1 ek ek    991169 May 28 06:20 agis_schedconf.cvmfs.json
[2025-05-28 07:40:29] -rw------- 1 ek ek   1603667 May 28 06:20 agis_ddmendpoints.agis.ALL.json
[2025-05-28 07:40:29] drwx------ 4 ek ek      4096 May 28 06:20 pilot3
[2025-05-28 07:40:29] -rw------- 1 ek ek        95 May 28 07:39 pilot_heartbeat.json
[2025-05-28 07:40:29] -rw------- 1 ek ek 206692038 May 28 07:39 HITS.44871837._059476.pool.root.1
[2025-05-28 07:40:29] -rw------- 1 ek ek      1034 May 28 07:40 memory_monitor_summary.json
[2025-05-28 07:40:29] -rw------- 1 ek ek    235201 May 28 07:40 log.44871837._059476.job.log.tgz.1
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek      8192 May 28 07:40 boinc_mmap_file
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek        27 May 28 07:40 wrapper_checkpoint.txt
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek       529 May 28 07:40 boinc_task_state.xml
[2025-05-28 07:40:29] -rw------- 1 ek ek      7702 May 28 07:40 heartbeat.json
[2025-05-28 07:40:29] -rw------- 1 ek ek      4354 May 28 07:40 pilotlog.txt
[2025-05-28 07:40:29] -rw------- 1 ek ek    464966 May 28 07:40 log.44871837._059476.job.log.1
[2025-05-28 07:40:29] -rw------- 1 ek ek       357 May 28 07:40 output.list
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek       620 May 28 07:40 runtime_log
[2025-05-28 07:40:29] -rw------- 1 ek ek    716800 May 28 07:40 result.tar.gz
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek      8854 May 28 07:40 runtime_log.err
[2025-05-28 07:40:29] -rw------- 1 ek ek       666 May 28 07:40 Eu3KDm1Sxd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm84XKDmCjKGen.diag
[2025-05-28 07:40:29] -rw-rw-r-- 1 ek ek     21062 May 28 07:40 stderr.txt
[2025-05-28 07:40:29] HITS file was successfully produced:
[2025-05-28 07:40:29] -rw------- 1 ek ek 206692038 May 28 07:39 shared/HITS.pool.root.1
[2025-05-28 07:40:29]  *** Contents of shared directory: ***
[2025-05-28 07:40:29] total 425116
[2025-05-28 07:40:29] -rw-r--r-- 2 ek ek 227369534 May 28 06:20 ATLAS.root_0
[2025-05-28 07:40:29] -rw-r--r-- 2 ek ek    508876 May 28 06:20 input.tar.gz
[2025-05-28 07:40:29] -rw-r--r-- 2 ek ek     15093 May 28 06:20 start_atlas.sh
[2025-05-28 07:40:29] -rw------- 1 ek ek 206692038 May 28 07:39 HITS.pool.root.1
[2025-05-28 07:40:29] -rw------- 1 ek ek    716800 May 28 07:40 result.tar.gz
07:40:30 (822357): run_atlas exited; CPU time 18223.432535
07:40:30 (822357): called boinc_finish(0)

</stderr_txt>
]]>

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