Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
14:02:21 (1251859): wrapper (7.7.26015): starting
14:02:21 (1251859): wrapper: running run_atlas (--nthreads 4)
[2025-05-28 14:02:21] Arguments: --nthreads 4
[2025-05-28 14:02:21] Threads: 4
[2025-05-28 14:02:21] Checking for CVMFS
[2025-05-28 14:02:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 14:02:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 14:02:21] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 14:02:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 14:02:21] 2.12.7.0 14849 12342 46448 146515 1 56 27428464 33554432 0 130560 0 4480951 99.988 1524393 1671 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2025-05-28 14:02:21] CVMFS is ok
[2025-05-28 14:02:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 14:02:21] Checking for apptainer binary...
[2025-05-28 14:02:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 14:02:21] Running /usr/bin/apptainer --version
[2025-05-28 14:02:21] apptainer version 1.4.0
[2025-05-28 14:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 14:02:21] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2025-05-28 14:02:21] apptainer works
[2025-05-28 14:02:21] Set ATHENA_PROC_NUMBER=4
[2025-05-28 14:02:21] Set ATHENA_CORE_NUMBER=4
[2025-05-28 14:02:21] Starting ATLAS job with PandaID=6666522445
[2025-05-28 14:02:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 15:19:54]  *** The last 200 lines of the pilot log: ***
[2025-05-28 15:19:54]  filesize=246011
[2025-05-28 15:19:54]  filetype=log
[2025-05-28 15:19:54]  guid=c25e82ce-cc64-4626-8266-fff7f6cc3efa
[2025-05-28 15:19:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-28 15:19:54]  is_altstaged=None
[2025-05-28 15:19:54]  is_tar=False
[2025-05-28 15:19:54]  lfn=log.44871837._059313.job.log.tgz.1
[2025-05-28 15:19:54]  mtime=0
[2025-05-28 15:19:54]  protocol_id=None
[2025-05-28 15:19:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-28 15:19:54]  replicas=None
[2025-05-28 15:19:54]  scope=mc23_13p6TeV
[2025-05-28 15:19:54]  status=None
[2025-05-28 15:19:54]  status_code=0
[2025-05-28 15:19:54]  storage_token=
[2025-05-28 15:19:54]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6666522445/log.44871837._059313.job.log.tgz.1
[2025-05-28 15:19:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/1b/log.44871837._059313.job.log.tgz.1
[2025-05-28 15:19:54]  workdir=None
[2025-05-28 15:19:54] ]
[2025-05-28 15:19:54] 2025-05-28 12:19:38,219 | INFO     | transferring file log.44871837._059313.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6666522445/log.44871837._059313.job.log.tgz.1 to /home/ek/BOINC/slots/
[2025-05-28 15:19:54] 2025-05-28 12:19:38,219 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6666522445/log.44871837._059313.job.log.tgz.1 /home/ek/BOINC/slots/1/log.44871837._059313.job
[2025-05-28 15:19:54] 2025-05-28 12:19:38,227 | INFO     | adding to output.list: log.44871837._059313.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/1b/log.44871837._059313.job.log.tg
[2025-05-28 15:19:54] 2025-05-28 12:19:38,227 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-28 15:19:54] 2025-05-28 12:19:38,227 | INFO     | summary of transferred files:
[2025-05-28 15:19:54] 2025-05-28 12:19:38,227 | INFO     |  -- lfn=log.44871837._059313.job.log.tgz.1, status_code=0, status=transferred
[2025-05-28 15:19:54] 2025-05-28 12:19:38,228 | INFO     | stage-out finished correctly
[2025-05-28 15:19:54] 2025-05-28 12:19:38,256 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-28 15:19:54] 2025-05-28 12:19:38,960 | INFO     | job 6666522445 has state=finished
[2025-05-28 15:19:54] 2025-05-28 12:19:38,960 | INFO     | preparing for final server update for job 6666522445 in state='finished'
[2025-05-28 15:19:54] 2025-05-28 12:19:39,812 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-28 15:19:54] 2025-05-28 12:19:39,812 | INFO     | this job has now completed (state=finished)
[2025-05-28 15:19:54] 2025-05-28 12:19:39,812 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-28 15:19:54] 2025-05-28 12:19:39,812 | INFO     | log transfer has been attempted: DONE
[2025-05-28 15:19:54] 2025-05-28 12:19:39,812 | INFO     | job 6666522445 has finished - writing final server update
[2025-05-28 15:19:54] 2025-05-28 12:19:39,812 | INFO     | total number of processed events: 400 (read)
[2025-05-28 15:19:54] 2025-05-28 12:19:39,813 | INFO     | executing command: lscpu
[2025-05-28 15:19:54] 2025-05-28 12:19:39,827 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-28 15:19:54] 2025-05-28 12:19:40,002 | INFO     | monitor loop #354: job 0:6666522445 is in state 'finished'
[2025-05-28 15:19:54] 2025-05-28 12:19:40,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 15:19:54] 2025-05-28 12:19:41,551 | INFO     | PID=1255582 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-28 15:19:54] 2025-05-28 12:19:41,590 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-28 15:19:54] 2025-05-28 12:19:41,590 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6666522445/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 15:19:54] 2025-05-28 12:19:41,591 | INFO     | extracted standard info from prmon json
[2025-05-28 15:19:54] 2025-05-28 12:19:41,591 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 15:19:54] 2025-05-28 12:19:41,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 15:19:54] 2025-05-28 12:19:41,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 15:19:54] 2025-05-28 12:19:41,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | fitting pss+swap vs Time
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | sum of square deviations: 101843770.0
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | sum of deviations: -14101686529.0
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | mean x: 1748432544.0
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | mean y: 2531993.15942029
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | -- intersect: 242097337130.3809
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | intersect: 242097337130.3809
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | chi2: 0.13221605942013306
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | -- intersect: 242097337130.3809
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | current memory leak: -138.46 B/s (using 69 data points, chi2=0.13)
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | ..............................
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | . Timing measurements:
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | . get job = 0 s
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | . initial setup = 1 s
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | . payload setup = 3 s
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | . stage-in = 0 s
[2025-05-28 15:19:54] 2025-05-28 12:19:41,592 | INFO     | . payload execution = 4611 s
[2025-05-28 15:19:54] 2025-05-28 12:19:41,593 | INFO     | . stage-out = 0 s
[2025-05-28 15:19:54] 2025-05-28 12:19:41,593 | INFO     | . log creation = 0 s
[2025-05-28 15:19:54] 2025-05-28 12:19:41,593 | INFO     | ..............................
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | 
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | job summary report
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | --------------------------------------------------
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | PanDA job id: 6666522445
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | task id: 44871837
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | errors: (none)
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | pilot state: finished 
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | transexitcode: 0
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | exeerrorcode: 0
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | exeerrordiag: 
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | exitcode: 0
[2025-05-28 15:19:54] 2025-05-28 12:19:41,623 | INFO     | exitmsg: OK
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | cpuconsumptiontime: 17571 s
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | nevents: 400
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | neventsw: 0
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | pid: 1262319
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | pgrp: 1262319
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | corecount: 4
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | event service: False
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | sizes: {0: 2405234, 2: 2405440, 11: 2405468, 4618: 2440622, 4622: 2440736}
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | --------------------------------------------------
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | 
[2025-05-28 15:19:54] 2025-05-28 12:19:41,624 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2025-05-28 15:19:54] 2025-05-28 12:19:41,632 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | job 6666522445 has completed (purged errors)
[2025-05-28 15:19:54] 2025-05-28 12:19:41,633 | INFO     | overall cleanup function is called
[2025-05-28 15:19:54] 2025-05-28 12:19:42,639 | INFO     | --- collectZombieJob: --- 10, [1262319]
[2025-05-28 15:19:54] 2025-05-28 12:19:42,640 | INFO     | zombie collector waiting for pid 1262319
[2025-05-28 15:19:54] 2025-05-28 12:19:42,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 15:19:54] 2025-05-28 12:19:42,640 | INFO     | collected zombie processes
[2025-05-28 15:19:54] 2025-05-28 12:19:42,640 | INFO     | will attempt to kill all subprocesses of pid=1262319
[2025-05-28 15:19:54] 2025-05-28 12:19:42,743 | INFO     | process IDs to be killed: [1262319] (in reverse order)
[2025-05-28 15:19:54] 2025-05-28 12:19:42,771 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 15:19:54] 2025-05-28 12:19:42,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 15:19:54] 2025-05-28 12:19:42,773 | INFO     | did not find any defunct processes belonging to 1262319
[2025-05-28 15:19:54] 2025-05-28 12:19:42,775 | INFO     | did not find any defunct processes belonging to 1262319
[2025-05-28 15:19:54] 2025-05-28 12:19:42,775 | INFO     | ready for new job
[2025-05-28 15:19:54] 2025-05-28 12:19:42,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 15:19:54] 2025-05-28 12:19:42,776 | INFO     | **************************************
[2025-05-28 15:19:54] 2025-05-28 12:19:42,776 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 15:19:54] 2025-05-28 12:19:42,776 | INFO     | **************************************
[2025-05-28 15:19:54] 2025-05-28 12:19:42,776 | INFO     | 
[2025-05-28 15:19:54] 2025-05-28 12:19:42,777 | INFO     | architecture information:
[2025-05-28 15:19:54] 2025-05-28 12:19:42,777 | INFO     | executing command: cat /etc/os-release
[2025-05-28 15:19:54] 2025-05-28 12:19:42,782 | INFO     | cat /etc/os-release:
[2025-05-28 15:19:54] NAME="CentOS Linux"
[2025-05-28 15:19:54] VERSION="7 (Core)"
[2025-05-28 15:19:54] ID="centos"
[2025-05-28 15:19:54] ID_LIKE="rhel fedora"
[2025-05-28 15:19:54] VERSION_ID="7"
[2025-05-28 15:19:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 15:19:54] ANSI_COLOR="0;31"
[2025-05-28 15:19:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 15:19:54] HOME_URL="https://www.centos.org/"
[2025-05-28 15:19:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 15:19:54] 
[2025-05-28 15:19:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 15:19:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 15:19:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 15:19:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 15:19:54] 
[2025-05-28 15:19:54] 2025-05-28 12:19:42,783 | INFO     | **************************************
[2025-05-28 15:19:54] 2025-05-28 12:19:43,285 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2025-05-28 15:19:54] 2025-05-28 12:19:43,292 | INFO     | sufficient remaining disk space (133747965952 B)
[2025-05-28 15:19:54] 2025-05-28 12:19:43,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 15:19:54] 2025-05-28 12:19:43,292 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 15:19:54] 2025-05-28 12:19:43,292 | INFO     | update_server=False
[2025-05-28 15:19:54] 2025-05-28 12:19:43,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 15:19:54] 2025-05-28 12:19:43,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 15:19:54] 2025-05-28 12:19:43,506 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 15:19:54] 2025-05-28 12:19:43,506 | INFO     | aborting loop
[2025-05-28 15:19:54] 2025-05-28 12:19:43,557 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 15:19:54] 2025-05-28 12:19:43,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 15:19:54] 2025-05-28 12:19:43,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 15:19:54] 2025-05-28 12:19:43,634 | INFO     | all data control threads have been joined
[2025-05-28 15:19:54] 2025-05-28 12:19:43,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 15:19:54] 2025-05-28 12:19:44,001 | INFO     | all payload control threads have been joined
[2025-05-28 15:19:54] 2025-05-28 12:19:44,036 | INFO     | all job control threads have been joined
[2025-05-28 15:19:54] 2025-05-28 12:19:44,126 | INFO     | job.realtimelogging is not enabled
[2025-05-28 15:19:54] 2025-05-28 12:19:44,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 15:19:54] 2025-05-28 12:19:44,294 | INFO     | [job] retrieve thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:44,297 | INFO     | [job] queue monitor thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:44,511 | INFO     | [job] job monitor thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:44,639 | INFO     | [data] control thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:44,725 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:44,763 | INFO     | [job] validate thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:44,822 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:44,852 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:44,852 | INFO     | [payload] failed_post thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:45,006 | INFO     | [payload] control thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:45,041 | INFO     | [job] control thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:45,132 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:45,318 | INFO     | [data] copytool_in thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:45,388 | INFO     | [payload] validate_post thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:45,769 | INFO     | [data] copytool_out thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:48,292 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 15:19:54] 2025-05-28 12:19:48,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925062690624)>', '<ExcThread(monitor, started 139924573505280)>']
[2025-05-28 15:19:54] 2025-05-28 12:19:49,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 15:19:54] 2025-05-28 12:19:49,587 | INFO     | [monitor] control thread has ended
[2025-05-28 15:19:54] 2025-05-28 12:19:53,901 | INFO     | all workflow threads have been joined
[2025-05-28 15:19:54] 2025-05-28 12:19:53,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 15:19:54] 2025-05-28 12:19:53,901 | INFO     | traces error code: 0
[2025-05-28 15:19:54] 2025-05-28 12:19:53,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 15:19:54] 2025-05-28 12:19:53,945 [wrapper] ==== pilot stdout END ====
[2025-05-28 15:19:54] 2025-05-28 12:19:53,946 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 15:19:54] 2025-05-28 12:19:53,948 [wrapper] pilotpid: 1255582
[2025-05-28 15:19:54] 2025-05-28 12:19:53,949 [wrapper] Pilot exit status: 0
[2025-05-28 15:19:54] 2025-05-28 12:19:53,954 [wrapper] pandaids: 6666522445
[2025-05-28 15:19:54] 2025-05-28 12:19:53,976 [wrapper] cleanup supervisor_pilot 1321515 1255583
[2025-05-28 15:19:54] 2025-05-28 12:19:53,977 [wrapper] Test setup, not cleaning
[2025-05-28 15:19:54] 2025-05-28 12:19:53,979 [wrapper] apfmon messages muted
[2025-05-28 15:19:54] 2025-05-28 12:19:53,980 [wrapper] ==== wrapper stdout END ====
[2025-05-28 15:19:54] 2025-05-28 12:19:53,981 [wrapper] ==== wrapper stderr END ====
[2025-05-28 15:19:54]  *** Error codes and diagnostics ***
[2025-05-28 15:19:54]     "exeErrorCode": 0,
[2025-05-28 15:19:54]     "exeErrorDiag": "",
[2025-05-28 15:19:54]     "pilotErrorCode": 0,
[2025-05-28 15:19:54]     "pilotErrorDiag": "",
[2025-05-28 15:19:54]  *** Listing of results directory ***
[2025-05-28 15:19:54] total 416456
[2025-05-28 15:19:54] -rw-r--r-- 1 ek ek    495897 May 27 03:11 pilot3.tar.gz
[2025-05-28 15:19:54] -rw-r--r-- 1 ek ek      5111 May 27 03:28 queuedata.json
[2025-05-28 15:19:54] -rwx------ 1 ek ek     37140 May 27 03:29 runpilot2-wrapper.sh
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek       100 May 28 14:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 15:19:54] -rwxr-xr-x 1 ek ek      7986 May 28 14:02 run_atlas
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek       105 May 28 14:02 job.xml
[2025-05-28 15:19:54] -rw-r--r-- 2 ek ek 224219123 May 28 14:02 EVNT.44871834._002346.pool.root.1
[2025-05-28 15:19:54] -rw-r--r-- 2 ek ek    508878 May 28 14:02 input.tar.gz
[2025-05-28 15:19:54] -rw-r--r-- 2 ek ek     15093 May 28 14:02 start_atlas.sh
[2025-05-28 15:19:54] drwxrwx--x 2 ek ek      4096 May 28 14:02 shared
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek         0 May 28 14:02 boinc_setup_complete
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek      9842 May 28 14:02 init_data.xml
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek         0 May 28 14:02 boinc_lockfile
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek      2559 May 28 14:02 pandaJob.out
[2025-05-28 15:19:54] -rw------- 1 ek ek    990995 May 28 14:02 agis_schedconf.cvmfs.json
[2025-05-28 15:19:54] -rw------- 1 ek ek   1603667 May 28 14:02 agis_ddmendpoints.agis.ALL.json
[2025-05-28 15:19:54] drwx------ 4 ek ek      4096 May 28 14:02 pilot3
[2025-05-28 15:19:54] -rw------- 1 ek ek        95 May 28 15:19 pilot_heartbeat.json
[2025-05-28 15:19:54] -rw------- 1 ek ek 196990156 May 28 15:19 HITS.44871837._059313.pool.root.1
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek      8192 May 28 15:19 boinc_mmap_file
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek        27 May 28 15:19 wrapper_checkpoint.txt
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek       529 May 28 15:19 boinc_task_state.xml
[2025-05-28 15:19:54] -rw------- 1 ek ek      1035 May 28 15:19 memory_monitor_summary.json
[2025-05-28 15:19:54] -rw------- 1 ek ek    246011 May 28 15:19 log.44871837._059313.job.log.tgz.1
[2025-05-28 15:19:54] -rw------- 1 ek ek      7708 May 28 15:19 heartbeat.json
[2025-05-28 15:19:54] -rw------- 1 ek ek      4426 May 28 15:19 pilotlog.txt
[2025-05-28 15:19:54] -rw------- 1 ek ek    452576 May 28 15:19 log.44871837._059313.job.log.1
[2025-05-28 15:19:54] -rw------- 1 ek ek       357 May 28 15:19 output.list
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek       620 May 28 15:19 runtime_log
[2025-05-28 15:19:54] -rw------- 1 ek ek    716800 May 28 15:19 result.tar.gz
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek      8854 May 28 15:19 runtime_log.err
[2025-05-28 15:19:54] -rw------- 1 ek ek       666 May 28 15:19 m9UMDm5Mxd7n9Rq4apOajLDm4fhM0noT9bVof3QYDm44QKDmeBjWMm.diag
[2025-05-28 15:19:54] -rw-rw-r-- 1 ek ek     20984 May 28 15:19 stderr.txt
[2025-05-28 15:19:54] HITS file was successfully produced:
[2025-05-28 15:19:54] -rw------- 1 ek ek 196990156 May 28 15:19 shared/HITS.pool.root.1
[2025-05-28 15:19:54]  *** Contents of shared directory: ***
[2025-05-28 15:19:54] total 412564
[2025-05-28 15:19:54] -rw-r--r-- 2 ek ek 224219123 May 28 14:02 ATLAS.root_0
[2025-05-28 15:19:54] -rw-r--r-- 2 ek ek    508878 May 28 14:02 input.tar.gz
[2025-05-28 15:19:54] -rw-r--r-- 2 ek ek     15093 May 28 14:02 start_atlas.sh
[2025-05-28 15:19:54] -rw------- 1 ek ek 196990156 May 28 15:19 HITS.pool.root.1
[2025-05-28 15:19:54] -rw------- 1 ek ek    716800 May 28 15:19 result.tar.gz
15:19:55 (1251859): run_atlas exited; CPU time 17608.182955
15:19:55 (1251859): called boinc_finish(0)

</stderr_txt>
]]>

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