Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:03:16 (3482849): wrapper (7.7.26015): starting
03:03:16 (3482849): wrapper: running run_atlas (--nthreads 4)
[2025-05-28 03:03:16] Arguments: --nthreads 4
[2025-05-28 03:03:16] Threads: 4
[2025-05-28 03:03:16] Checking for CVMFS
[2025-05-28 03:03:16] No cvmfs_config command found, will try listing directly
[2025-05-28 03:03:16] CVMFS is ok
[2025-05-28 03:03:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 03:03:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 03:03:16] Further information can be found at the LHC@home message board.
[2025-05-28 03:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 03:03:16] Checking for apptainer binary...
[2025-05-28 03:03:16] which: no apptainer in ((null))
[2025-05-28 03:03:16] apptainer is not installed, using version from CVMFS
[2025-05-28 03:03:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 03:03:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-05-28 03:03:16] apptainer works
[2025-05-28 03:03:16] Set ATHENA_PROC_NUMBER=4
[2025-05-28 03:03:16] Set ATHENA_CORE_NUMBER=4
[2025-05-28 03:03:16] Starting ATLAS job with PandaID=6666054663
[2025-05-28 03:03:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 07:18:15]  *** The last 200 lines of the pilot log: ***
[2025-05-28 07:18:15] 2025-05-28 05:17:58,605 | INFO     | -- intersect: -16784705237.023502
[2025-05-28 07:18:15] 2025-05-28 05:17:58,605 | INFO     | intersect: -16784705237.023502
[2025-05-28 07:18:15] 2025-05-28 05:17:58,605 | INFO     | chi2: 1.6342091422644653
[2025-05-28 07:18:15] 2025-05-28 05:17:58,606 | INFO     | current chi2=1.6342091422644653 (change=-0.040641122426803206 %)
[2025-05-28 07:18:15] 2025-05-28 05:17:58,606 | INFO     | right removable region: 244
[2025-05-28 07:18:15] 2025-05-28 05:17:58,606 | INFO     | sum of square deviations: 4560048290.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,608 | INFO     | sum of deviations: 4373297948.999999
[2025-05-28 07:18:15] 2025-05-28 05:17:58,608 | INFO     | mean x: 1748401983.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,608 | INFO     | mean y: 2327501.2612244897
[2025-05-28 07:18:15] 2025-05-28 05:17:58,608 | INFO     | -- intersect: -1674471146.4744623
[2025-05-28 07:18:15] 2025-05-28 05:17:58,608 | INFO     | intersect: -1674471146.4744623
[2025-05-28 07:18:15] 2025-05-28 05:17:58,608 | INFO     | chi2: 0.020941803749677124
[2025-05-28 07:18:15] 2025-05-28 05:17:58,609 | INFO     | current chi2=0.020941803749677124 (change=98.71801508191618 %)
[2025-05-28 07:18:15] 2025-05-28 05:17:58,609 | INFO     | sum of square deviations: 4286517580.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,610 | INFO     | sum of deviations: 7058618446.5
[2025-05-28 07:18:15] 2025-05-28 05:17:58,611 | INFO     | mean x: 1748402135.5
[2025-05-28 07:18:15] 2025-05-28 05:17:58,611 | INFO     | mean y: 2325988.6125
[2025-05-28 07:18:15] 2025-05-28 05:17:58,611 | INFO     | -- intersect: -2876771865.3476114
[2025-05-28 07:18:15] 2025-05-28 05:17:58,611 | INFO     | intersect: -2876771865.3476114
[2025-05-28 07:18:15] 2025-05-28 05:17:58,611 | INFO     | chi2: 0.01002947716516577
[2025-05-28 07:18:15] 2025-05-28 05:17:58,611 | INFO     | current chi2=0.01002947716516577 (change=52.1078638447254 %)
[2025-05-28 07:18:15] 2025-05-28 05:17:58,612 | INFO     | sum of square deviations: 4024149870.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,613 | INFO     | sum of deviations: 8149246444.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,613 | INFO     | mean x: 1748402288.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,613 | INFO     | mean y: 2325374.30212766
[2025-05-28 07:18:15] 2025-05-28 05:17:58,613 | INFO     | -- intersect: -3538338266.0819874
[2025-05-28 07:18:15] 2025-05-28 05:17:58,614 | INFO     | intersect: -3538338266.0819874
[2025-05-28 07:18:15] 2025-05-28 05:17:58,614 | INFO     | chi2: 0.0004417846547174699
[2025-05-28 07:18:15] 2025-05-28 05:17:58,614 | INFO     | current chi2=0.0004417846547174699 (change=95.59513773806805 %)
[2025-05-28 07:18:15] 2025-05-28 05:17:58,614 | INFO     | sum of square deviations: 3772712597.5
[2025-05-28 07:18:15] 2025-05-28 05:17:58,616 | INFO     | sum of deviations: 7119335711.500023
[2025-05-28 07:18:15] 2025-05-28 05:17:58,616 | INFO     | mean x: 1748402440.5
[2025-05-28 07:18:15] 2025-05-28 05:17:58,616 | INFO     | mean y: 2325996.5956521737
[2025-05-28 07:18:15] 2025-05-28 05:17:58,616 | INFO     | -- intersect: -3297014626.6402116
[2025-05-28 07:18:15] 2025-05-28 05:17:58,616 | INFO     | intersect: -3297014626.6402116
[2025-05-28 07:18:15] 2025-05-28 05:17:58,616 | INFO     | chi2: 0.00014698950782076839
[2025-05-28 07:18:15] 2025-05-28 05:17:58,617 | INFO     | current chi2=0.00014698950782076839 (change=66.72824502816398 %)
[2025-05-28 07:18:15] 2025-05-28 05:17:58,617 | INFO     | sum of square deviations: 3531973200.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,618 | INFO     | sum of deviations: 6532132174.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,618 | INFO     | mean x: 1748402593.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,618 | INFO     | mean y: 2326368.288888889
[2025-05-28 07:18:15] 2025-05-28 05:17:58,619 | INFO     | -- intersect: -3231219353.6436353
[2025-05-28 07:18:15] 2025-05-28 05:17:58,619 | INFO     | intersect: -3231219353.6436353
[2025-05-28 07:18:15] 2025-05-28 05:17:58,619 | INFO     | chi2: 0.0001309556368416939
[2025-05-28 07:18:15] 2025-05-28 05:17:58,619 | INFO     | current chi2=0.0001309556368416939 (change=10.90817379878936 %)
[2025-05-28 07:18:15] 2025-05-28 05:17:58,619 | INFO     | left removable region: 50
[2025-05-28 07:18:15] 2025-05-28 05:17:58,619 | INFO     | sum of square deviations: 2263977332.5
[2025-05-28 07:18:15] 2025-05-28 05:17:58,621 | INFO     | sum of deviations: 3855804815.0
[2025-05-28 07:18:15] 2025-05-28 05:17:58,621 | INFO     | mean x: 1748403172.5
[2025-05-28 07:18:15] 2025-05-28 05:17:58,621 | INFO     | mean y: 2327772.9175257734
[2025-05-28 07:18:15] 2025-05-28 05:17:58,621 | INFO     | -- intersect: -2975396992.3929396
[2025-05-28 07:18:15] 2025-05-28 05:17:58,621 | INFO     | intersect: -2975396992.3929396
[2025-05-28 07:18:15] 2025-05-28 05:17:58,621 | INFO     | chi2: 8.794300486806985e-05
[2025-05-28 07:18:15] 2025-05-28 05:17:58,621 | INFO     | -- intersect: -2975396992.3929396
[2025-05-28 07:18:15] 2025-05-28 05:17:58,621 | INFO     | current memory leak: 1.70 B/s (using 194 data points, chi2=0.00)
[2025-05-28 07:18:15] 2025-05-28 05:17:58,622 | INFO     | ..............................
[2025-05-28 07:18:15] 2025-05-28 05:17:58,622 | INFO     | . Timing measurements:
[2025-05-28 07:18:15] 2025-05-28 05:17:58,622 | INFO     | . get job = 0 s
[2025-05-28 07:18:15] 2025-05-28 05:17:58,622 | INFO     | . initial setup = 1 s
[2025-05-28 07:18:15] 2025-05-28 05:17:58,622 | INFO     | . payload setup = 7 s
[2025-05-28 07:18:15] 2025-05-28 05:17:58,622 | INFO     | . stage-in = 0 s
[2025-05-28 07:18:15] 2025-05-28 05:17:58,623 | INFO     | . payload execution = 15235 s
[2025-05-28 07:18:15] 2025-05-28 05:17:58,623 | INFO     | . stage-out = 1 s
[2025-05-28 07:18:15] 2025-05-28 05:17:58,623 | INFO     | . log creation = 0 s
[2025-05-28 07:18:15] 2025-05-28 05:17:58,623 | INFO     | ..............................
[2025-05-28 07:18:15] 2025-05-28 05:17:59,158 | INFO     | 
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | job summary report
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | --------------------------------------------------
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | PanDA job id: 6666054663
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | task id: 44871837
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | errors: (none)
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | pilot state: finished 
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | transexitcode: 0
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | exeerrorcode: 0
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | exeerrordiag: 
[2025-05-28 07:18:15] 2025-05-28 05:17:59,159 | INFO     | exitcode: 0
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | exitmsg: OK
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | cpuconsumptiontime: 57691 s
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | nevents: 400
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | neventsw: 0
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | pid: 3495569
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | pgrp: 3495569
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | corecount: 4
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | event service: False
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | sizes: {0: 2405244, 5: 2405450, 11: 2405506, 15247: 2436143, 15249: 2445106, 15252: 2445162, 15257: 2445460}
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | --------------------------------------------------
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | 
[2025-05-28 07:18:15] 2025-05-28 05:17:59,160 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-05-28 07:18:15] 2025-05-28 05:17:59,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,180 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 07:18:15] 2025-05-28 05:17:59,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,180 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 07:18:15] 2025-05-28 05:17:59,180 | INFO     | job 6666054663 has completed (purged errors)
[2025-05-28 07:18:15] 2025-05-28 05:17:59,180 | INFO     | overall cleanup function is called
[2025-05-28 07:18:15] 2025-05-28 05:18:00,188 | INFO     | --- collectZombieJob: --- 10, [3495569]
[2025-05-28 07:18:15] 2025-05-28 05:18:00,188 | INFO     | zombie collector waiting for pid 3495569
[2025-05-28 07:18:15] 2025-05-28 05:18:00,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 07:18:15] 2025-05-28 05:18:00,188 | INFO     | collected zombie processes
[2025-05-28 07:18:15] 2025-05-28 05:18:00,188 | INFO     | will attempt to kill all subprocesses of pid=3495569
[2025-05-28 07:18:15] 2025-05-28 05:18:00,500 | INFO     | process IDs to be killed: [3495569] (in reverse order)
[2025-05-28 07:18:15] 2025-05-28 05:18:00,616 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 07:18:15] 2025-05-28 05:18:00,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 07:18:15] 2025-05-28 05:18:00,626 | INFO     | did not find any defunct processes belonging to 3495569
[2025-05-28 07:18:15] 2025-05-28 05:18:00,634 | INFO     | did not find any defunct processes belonging to 3495569
[2025-05-28 07:18:15] 2025-05-28 05:18:00,634 | INFO     | ready for new job
[2025-05-28 07:18:15] 2025-05-28 05:18:00,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 07:18:15] 2025-05-28 05:18:00,637 | INFO     | **************************************
[2025-05-28 07:18:15] 2025-05-28 05:18:00,637 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 07:18:15] 2025-05-28 05:18:00,637 | INFO     | **************************************
[2025-05-28 07:18:15] 2025-05-28 05:18:00,637 | INFO     | 
[2025-05-28 07:18:15] 2025-05-28 05:18:00,640 | INFO     | architecture information:
[2025-05-28 07:18:15] 2025-05-28 05:18:00,641 | INFO     | executing command: cat /etc/os-release
[2025-05-28 07:18:15] 2025-05-28 05:18:00,653 | INFO     | cat /etc/os-release:
[2025-05-28 07:18:15] NAME="CentOS Linux"
[2025-05-28 07:18:15] VERSION="7 (Core)"
[2025-05-28 07:18:15] ID="centos"
[2025-05-28 07:18:15] ID_LIKE="rhel fedora"
[2025-05-28 07:18:15] VERSION_ID="7"
[2025-05-28 07:18:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 07:18:15] ANSI_COLOR="0;31"
[2025-05-28 07:18:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 07:18:15] HOME_URL="https://www.centos.org/"
[2025-05-28 07:18:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 07:18:15] 
[2025-05-28 07:18:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 07:18:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 07:18:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 07:18:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 07:18:15] 
[2025-05-28 07:18:15] 2025-05-28 05:18:00,654 | INFO     | **************************************
[2025-05-28 07:18:15] 2025-05-28 05:18:01,123 | INFO     | PID=3486506 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-28 07:18:15] 2025-05-28 05:18:01,124 | INFO     | .. there are 16 such processes running
[2025-05-28 07:18:15] 2025-05-28 05:18:01,156 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-05-28 07:18:15] 2025-05-28 05:18:01,170 | INFO     | sufficient remaining disk space (673612562432 B)
[2025-05-28 07:18:15] 2025-05-28 05:18:01,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 07:18:15] 2025-05-28 05:18:01,170 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 07:18:15] 2025-05-28 05:18:01,170 | INFO     | update_server=False
[2025-05-28 07:18:15] 2025-05-28 05:18:01,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 07:18:15] 2025-05-28 05:18:01,171 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 07:18:15] 2025-05-28 05:18:01,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 07:18:15] 2025-05-28 05:18:01,171 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 07:18:15] 2025-05-28 05:18:01,171 | INFO     | aborting loop
[2025-05-28 07:18:15] 2025-05-28 05:18:01,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 07:18:15] 2025-05-28 05:18:01,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 07:18:15] 2025-05-28 05:18:01,216 | INFO     | all data control threads have been joined
[2025-05-28 07:18:15] 2025-05-28 05:18:01,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 07:18:15] 2025-05-28 05:18:01,228 | INFO     | all job control threads have been joined
[2025-05-28 07:18:15] 2025-05-28 05:18:02,181 | INFO     | [job] retrieve thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:02,181 | INFO     | [job] job monitor thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:02,221 | INFO     | [data] control thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:02,233 | INFO     | [job] control thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:02,467 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:02,554 | INFO     | all payload control threads have been joined
[2025-05-28 07:18:15] 2025-05-28 05:18:02,611 | INFO     | [payload] failed_post thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:02,950 | INFO     | [job] validate thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:03,001 | INFO     | [payload] validate_post thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:03,096 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:03,206 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:03,230 | INFO     | [data] copytool_out thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:03,234 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:03,284 | INFO     | [data] copytool_in thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:03,559 | INFO     | [payload] control thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:03,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 07:18:15] 2025-05-28 05:18:03,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 07:18:15] 2025-05-28 05:18:04,733 | INFO     | [job] queue monitor thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:07,930 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 07:18:15] 2025-05-28 05:18:10,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22442886735680)>', '<ExcThread(monitor, started 22442640623360)>']
[2025-05-28 07:18:15] 2025-05-28 05:18:10,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 07:18:15] 2025-05-28 05:18:10,217 | INFO     | [monitor] control thread has ended
[2025-05-28 07:18:15] 2025-05-28 05:18:15,027 | INFO     | all workflow threads have been joined
[2025-05-28 07:18:15] 2025-05-28 05:18:15,027 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 07:18:15] 2025-05-28 05:18:15,027 | INFO     | traces error code: 0
[2025-05-28 07:18:15] 2025-05-28 05:18:15,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 07:18:15] 2025-05-28 05:18:15,154 [wrapper] ==== pilot stdout END ====
[2025-05-28 07:18:15] 2025-05-28 05:18:15,157 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 07:18:15] 2025-05-28 05:18:15,159 [wrapper] pilotpid: 3486506
[2025-05-28 07:18:15] 2025-05-28 05:18:15,161 [wrapper] Pilot exit status: 0
[2025-05-28 07:18:15] 2025-05-28 05:18:15,170 [wrapper] pandaids: 6666054663
[2025-05-28 07:18:15] 2025-05-28 05:18:15,223 [wrapper] cleanup supervisor_pilot 4125787 3486507
[2025-05-28 07:18:15] 2025-05-28 05:18:15,226 [wrapper] Test setup, not cleaning
[2025-05-28 07:18:15] 2025-05-28 05:18:15,228 [wrapper] apfmon messages muted
[2025-05-28 07:18:15] 2025-05-28 05:18:15,230 [wrapper] ==== wrapper stdout END ====
[2025-05-28 07:18:15] 2025-05-28 05:18:15,232 [wrapper] ==== wrapper stderr END ====
[2025-05-28 07:18:15]  *** Error codes and diagnostics ***
[2025-05-28 07:18:15]     "exeErrorCode": 0,
[2025-05-28 07:18:15]     "exeErrorDiag": "",
[2025-05-28 07:18:15]     "pilotErrorCode": 0,
[2025-05-28 07:18:15]     "pilotErrorDiag": "",
[2025-05-28 07:18:15]  *** Listing of results directory ***
[2025-05-28 07:18:15] total 417396
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc    495897 May 26 18:14 pilot3.tar.gz
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc      5111 May 26 18:58 queuedata.json
[2025-05-28 07:18:15] -rwx------ 1 boinc boinc     37140 May 26 18:58 runpilot2-wrapper.sh
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc       100 May 28 03:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 07:18:15] -rwxr-xr-x 1 boinc boinc      7986 May 28 03:03 run_atlas
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc       105 May 28 03:03 job.xml
[2025-05-28 07:18:15] -rw-r--r-- 2 boinc boinc 224163314 May 28 03:03 EVNT.44871834._002153.pool.root.1
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc      6635 May 28 03:03 init_data.xml
[2025-05-28 07:18:15] -rw-r--r-- 2 boinc boinc     15093 May 28 03:03 start_atlas.sh
[2025-05-28 07:18:15] drwxrwx--x 2 boinc boinc      4096 May 28 03:03 shared
[2025-05-28 07:18:15] -rw-r--r-- 2 boinc boinc    508880 May 28 03:03 input.tar.gz
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc         0 May 28 03:03 boinc_lockfile
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc      2558 May 28 03:03 pandaJob.out
[2025-05-28 07:18:15] -rw------- 1 boinc boinc    991169 May 28 03:03 agis_schedconf.cvmfs.json
[2025-05-28 07:18:15] drwx------ 4 boinc boinc      4096 May 28 03:03 pilot3
[2025-05-28 07:18:15] -rw------- 1 boinc boinc 195882753 May 28 07:17 HITS.44871837._054188.pool.root.1
[2025-05-28 07:18:15] -rw------- 1 boinc boinc        95 May 28 07:17 pilot_heartbeat.json
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc       530 May 28 07:17 boinc_task_state.xml
[2025-05-28 07:18:15] -rw------- 1 boinc boinc      1033 May 28 07:17 memory_monitor_summary.json
[2025-05-28 07:18:15] -rw------- 1 boinc boinc   1603667 May 28 07:17 agis_ddmendpoints.agis.ALL.json
[2025-05-28 07:18:15] -rw------- 1 boinc boinc    352591 May 28 07:17 log.44871837._054188.job.log.tgz.1
[2025-05-28 07:18:15] -rw------- 1 boinc boinc      7721 May 28 07:17 heartbeat.json
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc      8192 May 28 07:18 boinc_mmap_file
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc        28 May 28 07:18 wrapper_checkpoint.txt
[2025-05-28 07:18:15] -rw------- 1 boinc boinc      4882 May 28 07:18 pilotlog.txt
[2025-05-28 07:18:15] -rw------- 1 boinc boinc   1410801 May 28 07:18 log.44871837._054188.job.log.1
[2025-05-28 07:18:15] -rw------- 1 boinc boinc       357 May 28 07:18 output.list
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc       620 May 28 07:18 runtime_log
[2025-05-28 07:18:15] -rw------- 1 boinc boinc   1781760 May 28 07:18 result.tar.gz
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc      9026 May 28 07:18 runtime_log.err
[2025-05-28 07:18:15] -rw------- 1 boinc boinc       665 May 28 07:18 eIPODmdKqd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbUQKDm7l60Ro.diag
[2025-05-28 07:18:15] -rw-r--r-- 1 boinc boinc     20730 May 28 07:18 stderr.txt
[2025-05-28 07:18:15] HITS file was successfully produced:
[2025-05-28 07:18:15] -rw------- 1 boinc boinc 195882753 May 28 07:17 shared/HITS.pool.root.1
[2025-05-28 07:18:15]  *** Contents of shared directory: ***
[2025-05-28 07:18:15] total 412468
[2025-05-28 07:18:15] -rw-r--r-- 2 boinc boinc 224163314 May 28 03:03 ATLAS.root_0
[2025-05-28 07:18:15] -rw-r--r-- 2 boinc boinc     15093 May 28 03:03 start_atlas.sh
[2025-05-28 07:18:15] -rw-r--r-- 2 boinc boinc    508880 May 28 03:03 input.tar.gz
[2025-05-28 07:18:15] -rw------- 1 boinc boinc 195882753 May 28 07:17 HITS.pool.root.1
[2025-05-28 07:18:15] -rw------- 1 boinc boinc   1781760 May 28 07:18 result.tar.gz
07:18:16 (3482849): run_atlas exited; CPU time 58208.536182
07:18:16 (3482849): called boinc_finish(0)

</stderr_txt>
]]>

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