Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:56:19 (1123614): wrapper (7.7.26015): starting
01:56:19 (1123614): wrapper: running run_atlas (--nthreads 8)
[2025-05-27 01:56:19] Arguments: --nthreads 8
[2025-05-27 01:56:19] Threads: 8
[2025-05-27 01:56:19] Checking for CVMFS
[2025-05-27 01:56:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-27 01:56:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-27 01:56:20] Running cvmfs_config stat atlas.cern.ch
[2025-05-27 01:56:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-27 01:56:21] 2.12.6.0 1699072 11381 352488 146469 2 1041 20805976 32935936 25943 16776704 0 56852189 99.569 60373145 28566 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-27 01:56:21] CVMFS is ok
[2025-05-27 01:56:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-27 01:56:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-27 01:56:21] Further information can be found at the LHC@home message board.
[2025-05-27 01:56:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-27 01:56:21] Checking for apptainer binary...
[2025-05-27 01:56:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-27 01:56:21] Running /usr/bin/apptainer --version
[2025-05-27 01:56:21] apptainer version 1.4.1-1.el9
[2025-05-27 01:56:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-27 01:56:22] c6-2-11-3.aglt2.org
[2025-05-27 01:56:22] apptainer works
[2025-05-27 01:56:22] Set ATHENA_PROC_NUMBER=8
[2025-05-27 01:56:22] Set ATHENA_CORE_NUMBER=8
[2025-05-27 01:56:22] Starting ATLAS job with PandaID=6666453745
[2025-05-27 01:56:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-27 07:11:54]  *** The last 200 lines of the pilot log: ***
[2025-05-27 07:11:54] 2025-05-27 11:11:40,043 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6666453745/memory_monitor_summary.json (trf name=prmon)
[2025-05-27 07:11:54] 2025-05-27 11:11:40,045 | INFO     | extracted standard info from prmon json
[2025-05-27 07:11:54] 2025-05-27 11:11:40,045 | INFO     | extracted standard memory fields from prmon json
[2025-05-27 07:11:54] 2025-05-27 11:11:40,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-27 07:11:54] 2025-05-27 11:11:40,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-27 07:11:54] 2025-05-27 11:11:40,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-27 07:11:54] 2025-05-27 11:11:40,074 | INFO     | fitting pss+swap vs Time
[2025-05-27 07:11:54] 2025-05-27 11:11:40,075 | INFO     | sum of square deviations: 8971930561.042305
[2025-05-27 07:11:54] 2025-05-27 11:11:40,100 | INFO     | sum of deviations: 102603985508.66122
[2025-05-27 07:11:54] 2025-05-27 11:11:40,100 | INFO     | mean x: 1748334924.188925
[2025-05-27 07:11:54] 2025-05-27 11:11:40,101 | INFO     | mean y: 2091275.4885993486
[2025-05-27 07:11:54] 2025-05-27 11:11:40,101 | INFO     | -- intersect: -19992059370.82746
[2025-05-27 07:11:54] 2025-05-27 11:11:40,101 | INFO     | intersect: -19992059370.82746
[2025-05-27 07:11:54] 2025-05-27 11:11:40,101 | INFO     | chi2: 3.883523076343078
[2025-05-27 07:11:54] 2025-05-27 11:11:40,102 | INFO     | sum of square deviations: 8540675048.360937
[2025-05-27 07:11:54] 2025-05-27 11:11:40,108 | INFO     | sum of deviations: 125556386749.75827
[2025-05-27 07:11:54] 2025-05-27 11:11:40,108 | INFO     | mean x: 1748334771.692053
[2025-05-27 07:11:54] 2025-05-27 11:11:40,109 | INFO     | mean y: 2099320.857615894
[2025-05-27 07:11:54] 2025-05-27 11:11:40,109 | INFO     | -- intersect: -25700154367.478806
[2025-05-27 07:11:54] 2025-05-27 11:11:40,109 | INFO     | intersect: -25700154367.478806
[2025-05-27 07:11:54] 2025-05-27 11:11:40,109 | INFO     | chi2: 3.1266783105685705
[2025-05-27 07:11:54] 2025-05-27 11:11:40,109 | INFO     | current chi2=3.1266783105685705 (change=19.488612553506204 %)
[2025-05-27 07:11:54] 2025-05-27 11:11:40,109 | INFO     | right removable region: 301
[2025-05-27 07:11:54] 2025-05-27 11:11:40,110 | INFO     | sum of square deviations: 8540639668.360943
[2025-05-27 07:11:54] 2025-05-27 11:11:40,116 | INFO     | sum of deviations: 40994993173.00998
[2025-05-27 07:11:54] 2025-05-27 11:11:40,116 | INFO     | mean x: 1748335076.692053
[2025-05-27 07:11:54] 2025-05-27 11:11:40,117 | INFO     | mean y: 2112996.1291390727
[2025-05-27 07:11:54] 2025-05-27 11:11:40,117 | INFO     | -- intersect: -8389879561.365041
[2025-05-27 07:11:54] 2025-05-27 11:11:40,117 | INFO     | intersect: -8389879561.365041
[2025-05-27 07:11:54] 2025-05-27 11:11:40,117 | INFO     | chi2: 1.6454645162168462
[2025-05-27 07:11:54] 2025-05-27 11:11:40,117 | INFO     | current chi2=1.6454645162168462 (change=57.62959344208921 %)
[2025-05-27 07:11:54] 2025-05-27 11:11:40,118 | INFO     | sum of square deviations: 8123395550.673418
[2025-05-27 07:11:54] 2025-05-27 11:11:40,124 | INFO     | sum of deviations: 5905165891.107746
[2025-05-27 07:11:54] 2025-05-27 11:11:40,124 | INFO     | mean x: 1748335229.1952863
[2025-05-27 07:11:54] 2025-05-27 11:11:40,124 | INFO     | mean y: 2125825.791245791
[2025-05-27 07:11:54] 2025-05-27 11:11:40,125 | INFO     | -- intersect: -1268797090.280493
[2025-05-27 07:11:54] 2025-05-27 11:11:40,125 | INFO     | intersect: -1268797090.280493
[2025-05-27 07:11:54] 2025-05-27 11:11:40,125 | INFO     | chi2: 1.002479764530949
[2025-05-27 07:11:54] 2025-05-27 11:11:40,125 | INFO     | current chi2=1.002479764530949 (change=39.07618458793687 %)
[2025-05-27 07:11:54] 2025-05-27 11:11:40,126 | INFO     | sum of square deviations: 7719965645.479425
[2025-05-27 07:11:54] 2025-05-27 11:11:40,132 | INFO     | sum of deviations: -6570387264.08218
[2025-05-27 07:11:54] 2025-05-27 11:11:40,132 | INFO     | mean x: 1748335381.69863
[2025-05-27 07:11:54] 2025-05-27 11:11:40,132 | INFO     | mean y: 2130536.294520548
[2025-05-27 07:11:54] 2025-05-27 11:11:40,132 | INFO     | -- intersect: 1490121681.9524693
[2025-05-27 07:11:54] 2025-05-27 11:11:40,132 | INFO     | intersect: 1490121681.9524693
[2025-05-27 07:11:54] 2025-05-27 11:11:40,133 | INFO     | chi2: 0.9192989158513569
[2025-05-27 07:11:54] 2025-05-27 11:11:40,133 | INFO     | current chi2=0.9192989158513569 (change=8.297508999447139 %)
[2025-05-27 07:11:54] 2025-05-27 11:11:40,133 | INFO     | left removable region: 30
[2025-05-27 07:11:54] 2025-05-27 11:11:40,133 | INFO     | sum of square deviations: 6171257443.837655
[2025-05-27 07:11:54] 2025-05-27 11:11:40,139 | INFO     | sum of deviations: 3602945983.169744
[2025-05-27 07:11:54] 2025-05-27 11:11:40,140 | INFO     | mean x: 1748335656.2029521
[2025-05-27 07:11:54] 2025-05-27 11:11:40,140 | INFO     | mean y: 2145154.2878228785
[2025-05-27 07:11:54] 2025-05-27 11:11:40,140 | INFO     | -- intersect: -1018580198.2153249
[2025-05-27 07:11:54] 2025-05-27 11:11:40,140 | INFO     | intersect: -1018580198.2153249
[2025-05-27 07:11:54] 2025-05-27 11:11:40,140 | INFO     | chi2: 0.09031455303090405
[2025-05-27 07:11:54] 2025-05-27 11:11:40,141 | INFO     | -- intersect: -1018580198.2153249
[2025-05-27 07:11:54] 2025-05-27 11:11:40,141 | INFO     | current memory leak: 0.58 B/s (using 271 data points, chi2=0.09)
[2025-05-27 07:11:54] 2025-05-27 11:11:40,141 | INFO     | ..............................
[2025-05-27 07:11:54] 2025-05-27 11:11:40,142 | INFO     | . Timing measurements:
[2025-05-27 07:11:54] 2025-05-27 11:11:40,142 | INFO     | . get job = 0 s
[2025-05-27 07:11:54] 2025-05-27 11:11:40,142 | INFO     | . initial setup = 5 s
[2025-05-27 07:11:54] 2025-05-27 11:11:40,142 | INFO     | . payload setup = 46 s
[2025-05-27 07:11:54] 2025-05-27 11:11:40,142 | INFO     | . stage-in = 0 s
[2025-05-27 07:11:54] 2025-05-27 11:11:40,142 | INFO     | . payload execution = 18699 s
[2025-05-27 07:11:54] 2025-05-27 11:11:40,142 | INFO     | . stage-out = 4 s
[2025-05-27 07:11:54] 2025-05-27 11:11:40,142 | INFO     | . log creation = 0 s
[2025-05-27 07:11:54] 2025-05-27 11:11:40,142 | INFO     | ..............................
[2025-05-27 07:11:54] 2025-05-27 11:11:40,673 | INFO     | 
[2025-05-27 07:11:54] 2025-05-27 11:11:40,673 | INFO     | job summary report
[2025-05-27 07:11:54] 2025-05-27 11:11:40,673 | INFO     | --------------------------------------------------
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | PanDA job id: 6666453745
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | task id: 44871837
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | errors: (none)
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | pilot state: finished 
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | transexitcode: 0
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | exeerrorcode: 0
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | exeerrordiag: 
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | exitcode: 0
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | exitmsg: OK
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | cpuconsumptiontime: 52193 s
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | nevents: 400
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | neventsw: 0
[2025-05-27 07:11:54] 2025-05-27 11:11:40,674 | INFO     | pid: 1147638
[2025-05-27 07:11:54] 2025-05-27 11:11:40,675 | INFO     | pgrp: 1147638
[2025-05-27 07:11:54] 2025-05-27 11:11:40,675 | INFO     | corecount: 8
[2025-05-27 07:11:54] 2025-05-27 11:11:40,675 | INFO     | event service: False
[2025-05-27 07:11:54] 2025-05-27 11:11:40,675 | INFO     | sizes: {0: 2405001, 1: 2405085, 2: 2405284, 3: 2405284, 14: 2405312, 25: 2405340, 31: 2405702, 36: 2405730, 18749: 2437727, 18754: 2446668, 18756: 2446724, 18785: 
[2025-05-27 07:11:54] 2025-05-27 11:11:40,675 | INFO     | --------------------------------------------------
[2025-05-27 07:11:54] 2025-05-27 11:11:40,675 | INFO     | 
[2025-05-27 07:11:54] 2025-05-27 11:11:40,675 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-27 07:11:54] 2025-05-27 11:11:40,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | job 6666453745 has completed (purged errors)
[2025-05-27 07:11:54] 2025-05-27 11:11:40,742 | INFO     | overall cleanup function is called
[2025-05-27 07:11:54] 2025-05-27 11:11:41,754 | INFO     | --- collectZombieJob: --- 10, [1147638]
[2025-05-27 07:11:54] 2025-05-27 11:11:41,754 | INFO     | zombie collector waiting for pid 1147638
[2025-05-27 07:11:54] 2025-05-27 11:11:41,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-27 07:11:54] 2025-05-27 11:11:41,755 | INFO     | collected zombie processes
[2025-05-27 07:11:54] 2025-05-27 11:11:41,755 | INFO     | will attempt to kill all subprocesses of pid=1147638
[2025-05-27 07:11:54] 2025-05-27 11:11:42,910 | INFO     | process IDs to be killed: [1147638] (in reverse order)
[2025-05-27 07:11:54] 2025-05-27 11:11:43,242 | WARNING  | found no corresponding commands to process id(s)
[2025-05-27 07:11:54] 2025-05-27 11:11:43,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-27 07:11:54] 2025-05-27 11:11:43,419 | INFO     | did not find any defunct processes belonging to 1147638
[2025-05-27 07:11:54] 2025-05-27 11:11:43,543 | INFO     | did not find any defunct processes belonging to 1147638
[2025-05-27 07:11:54] 2025-05-27 11:11:43,544 | INFO     | ready for new job
[2025-05-27 07:11:54] 2025-05-27 11:11:43,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-27 07:11:54] 2025-05-27 11:11:43,546 | INFO     | **************************************
[2025-05-27 07:11:54] 2025-05-27 11:11:43,546 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-27 07:11:54] 2025-05-27 11:11:43,546 | INFO     | **************************************
[2025-05-27 07:11:54] 2025-05-27 11:11:43,546 | INFO     | 
[2025-05-27 07:11:54] 2025-05-27 11:11:43,569 | INFO     | architecture information:
[2025-05-27 07:11:54] 2025-05-27 11:11:43,573 | INFO     | executing command: cat /etc/os-release
[2025-05-27 07:11:54] 2025-05-27 11:11:43,622 | INFO     | cat /etc/os-release:
[2025-05-27 07:11:54] NAME="CentOS Linux"
[2025-05-27 07:11:54] VERSION="7 (Core)"
[2025-05-27 07:11:54] ID="centos"
[2025-05-27 07:11:54] ID_LIKE="rhel fedora"
[2025-05-27 07:11:54] VERSION_ID="7"
[2025-05-27 07:11:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-27 07:11:54] ANSI_COLOR="0;31"
[2025-05-27 07:11:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-27 07:11:54] HOME_URL="https://www.centos.org/"
[2025-05-27 07:11:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-27 07:11:54] 
[2025-05-27 07:11:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-27 07:11:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-27 07:11:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-27 07:11:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-27 07:11:54] 
[2025-05-27 07:11:54] 2025-05-27 11:11:43,622 | INFO     | **************************************
[2025-05-27 07:11:54] 2025-05-27 11:11:44,125 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-27 07:11:54] 2025-05-27 11:11:44,250 | INFO     | sufficient remaining disk space (73967599616 B)
[2025-05-27 07:11:54] 2025-05-27 11:11:44,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-27 07:11:54] 2025-05-27 11:11:44,250 | INFO     | current server update state: UPDATING_FINAL
[2025-05-27 07:11:54] 2025-05-27 11:11:44,250 | INFO     | update_server=False
[2025-05-27 07:11:54] 2025-05-27 11:11:44,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-27 07:11:54] 2025-05-27 11:11:44,251 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-27 07:11:54] 2025-05-27 11:11:44,251 | INFO     | found 0 job(s) in 20 queues
[2025-05-27 07:11:54] 2025-05-27 11:11:44,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-27 07:11:54] 2025-05-27 11:11:44,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-27 07:11:54] 2025-05-27 11:11:44,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-27 07:11:54] 2025-05-27 11:11:44,251 | INFO     | aborting loop
[2025-05-27 07:11:54] 2025-05-27 11:11:44,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-27 07:11:54] 2025-05-27 11:11:44,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-27 07:11:54] 2025-05-27 11:11:44,662 | INFO     | all job control threads have been joined
[2025-05-27 07:11:54] 2025-05-27 11:11:44,952 | INFO     | all payload control threads have been joined
[2025-05-27 07:11:54] 2025-05-27 11:11:45,152 | INFO     | all data control threads have been joined
[2025-05-27 07:11:54] 2025-05-27 11:11:45,256 | INFO     | [job] retrieve thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:45,257 | INFO     | [job] job monitor thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:45,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-27 07:11:54] 2025-05-27 11:11:45,401 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:45,473 | INFO     | [job] validate thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:45,565 | INFO     | [job] create_data_payload thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:45,590 | INFO     | [payload] execute_payloads thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:45,601 | INFO     | [data] copytool_in thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:45,668 | INFO     | [job] control thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:45,766 | INFO     | [payload] validate_post thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:45,958 | INFO     | [payload] control thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:46,158 | INFO     | [data] control thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:46,331 | INFO     | [payload] failed_post thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:46,358 | INFO     | [job] queue monitor thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:46,436 | INFO     | [payload] validate_pre thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:46,534 | INFO     | [data] copytool_out thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:48,262 | INFO     | [data] queue_monitor thread has finished
[2025-05-27 07:11:54] 2025-05-27 11:11:48,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336577337152)>', '<ExcThread(monitor, started 140336101844736)>']
[2025-05-27 07:11:54] 2025-05-27 11:11:49,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-27 07:11:54] 2025-05-27 11:11:49,280 | INFO     | [monitor] control thread has ended
[2025-05-27 07:11:54] 2025-05-27 11:11:53,598 | INFO     | all workflow threads have been joined
[2025-05-27 07:11:54] 2025-05-27 11:11:53,598 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-27 07:11:54] 2025-05-27 11:11:53,599 | INFO     | traces error code: 0
[2025-05-27 07:11:54] 2025-05-27 11:11:53,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-27 07:11:54] 2025-05-27 11:11:53,979 [wrapper] ==== pilot stdout END ====
[2025-05-27 07:11:54] 2025-05-27 11:11:53,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-27 07:11:54] 2025-05-27 11:11:54,009 [wrapper] pilotpid: 1132805
[2025-05-27 07:11:54] 2025-05-27 11:11:54,025 [wrapper] Pilot exit status: 0
[2025-05-27 07:11:54] 2025-05-27 11:11:54,123 [wrapper] pandaids: 6666453745
[2025-05-27 07:11:54] 2025-05-27 11:11:54,431 [wrapper] cleanup supervisor_pilot 2890665 1132806
[2025-05-27 07:11:54] 2025-05-27 11:11:54,450 [wrapper] Test setup, not cleaning
[2025-05-27 07:11:54] 2025-05-27 11:11:54,459 [wrapper] apfmon messages muted
[2025-05-27 07:11:54] 2025-05-27 11:11:54,481 [wrapper] ==== wrapper stdout END ====
[2025-05-27 07:11:54] 2025-05-27 11:11:54,514 [wrapper] ==== wrapper stderr END ====
[2025-05-27 07:11:54]  *** Error codes and diagnostics ***
[2025-05-27 07:11:54]     "exeErrorCode": 0,
[2025-05-27 07:11:54]     "exeErrorDiag": "",
[2025-05-27 07:11:54]     "pilotErrorCode": 0,
[2025-05-27 07:11:54]     "pilotErrorDiag": "",
[2025-05-27 07:11:54]  *** Listing of results directory ***
[2025-05-27 07:11:54] total 409368
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas    495897 May 26 19:13 pilot3.tar.gz
[2025-05-27 07:11:54] -rwx------. 1 boincer umatlas     37140 May 26 19:47 runpilot2-wrapper.sh
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas      5111 May 26 19:47 queuedata.json
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas       100 May 27 01:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-27 07:11:54] -rwxr-xr-x. 1 boincer umatlas      7986 May 27 01:56 run_atlas
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas       105 May 27 01:56 job.xml
[2025-05-27 07:11:54] -rw-r--r--. 2 boincer umatlas 223066798 May 27 01:56 EVNT.44871834._002328.pool.root.1
[2025-05-27 07:11:54] -rw-r--r--. 2 boincer umatlas     15093 May 27 01:56 start_atlas.sh
[2025-05-27 07:11:54] drwxrwx--x. 2 boincer umatlas      4096 May 27 01:56 shared
[2025-05-27 07:11:54] -rw-r--r--. 2 boincer umatlas    508873 May 27 01:56 input.tar.gz
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas         0 May 27 01:56 boinc_lockfile
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas      2556 May 27 01:56 pandaJob.out
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas    990410 May 27 01:57 agis_schedconf.cvmfs.json
[2025-05-27 07:11:54] drwx------. 4 boincer umatlas      4096 May 27 01:57 pilot3
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas      6853 May 27 07:09 init_data.xml
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas 188435071 May 27 07:09 HITS.44871837._058808.pool.root.1
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas       531 May 27 07:10 boinc_task_state.xml
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas      1047 May 27 07:10 memory_monitor_summary.json
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas   1603667 May 27 07:11 agis_ddmendpoints.agis.ALL.json
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas    418894 May 27 07:11 log.44871837._058808.job.log.tgz.1
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas        95 May 27 07:11 pilot_heartbeat.json
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas        28 May 27 07:11 wrapper_checkpoint.txt
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas      8192 May 27 07:11 boinc_mmap_file
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas      7725 May 27 07:11 heartbeat.json
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas      4476 May 27 07:11 pilotlog.txt
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas   1505783 May 27 07:11 log.44871837._058808.job.log.1
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas       357 May 27 07:11 output.list
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas       620 May 27 07:11 runtime_log
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas   1945600 May 27 07:11 result.tar.gz
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas      8665 May 27 07:11 runtime_log.err
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas       656 May 27 07:11 aikNDmJiwd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoyXKDmMrQeUo.diag
[2025-05-27 07:11:54] -rw-r--r--. 1 boincer umatlas     20992 May 27 07:11 stderr.txt
[2025-05-27 07:11:54] HITS file was successfully produced:
[2025-05-27 07:11:54] -rw-------. 1 boincer umatlas 188435071 May 27 07:09 shared/HITS.pool.root.1
[2025-05-27 07:11:54]  *** Contents of shared directory: ***
[2025-05-27 07:11:55] total 404284
[2025-05-27 07:11:55] -rw-r--r--. 2 boincer umatlas 223066798 May 27 01:56 ATLAS.root_0
[2025-05-27 07:11:55] -rw-r--r--. 2 boincer umatlas     15093 May 27 01:56 start_atlas.sh
[2025-05-27 07:11:55] -rw-r--r--. 2 boincer umatlas    508873 May 27 01:56 input.tar.gz
[2025-05-27 07:11:55] -rw-------. 1 boincer umatlas 188435071 May 27 07:09 HITS.pool.root.1
[2025-05-27 07:11:55] -rw-------. 1 boincer umatlas   1945600 May 27 07:11 result.tar.gz
07:11:56 (1123614): run_atlas exited; CPU time 53077.685821
07:11:56 (1123614): called boinc_finish(0)

</stderr_txt>
]]>

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