Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-27 13:46:07 (14080): Detected: vboxwrapper 26206
2025-05-27 13:46:07 (14080): Detected: BOINC client v8.0.2
2025-05-27 13:46:08 (14080): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-27 13:46:08 (14080): Successfully copied 'init_data.xml' to the shared directory.
2025-05-27 13:46:08 (14080): Create VM. (boinc_1ccd9c96df3fc0b4, slot#3)
2025-05-27 13:46:09 (14080): Setting Memory Size for VM. (4800MB)
2025-05-27 13:46:09 (14080): Setting CPU Count for VM. (8)
2025-05-27 13:46:10 (14080): Setting Chipset Options for VM.
2025-05-27 13:46:10 (14080): Setting Graphics Controller Options for VM.
2025-05-27 13:46:10 (14080): Setting Boot Options for VM.
2025-05-27 13:46:10 (14080): Setting Network Configuration for NAT.
2025-05-27 13:46:11 (14080): Enabling VM Network Access.
2025-05-27 13:46:11 (14080): Disabling USB Support for VM.
2025-05-27 13:46:11 (14080): Disabling COM Port Support for VM.
2025-05-27 13:46:12 (14080): Disabling LPT Port Support for VM.
2025-05-27 13:46:12 (14080): Disabling Audio Support for VM.
2025-05-27 13:46:12 (14080): Disabling Clipboard Support for VM.
2025-05-27 13:46:12 (14080): Disabling Drag and Drop Support for VM.
2025-05-27 13:46:13 (14080): Adding storage controller(s) to VM.
2025-05-27 13:46:13 (14080): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-27 13:46:13 (14080): Adding VirtualBox Guest Additions to VM.
2025-05-27 13:46:14 (14080): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-27 13:46:14 (14080): forwarding host port 57594 to guest port 80
2025-05-27 13:46:14 (14080): Enabling remote desktop for VM.
2025-05-27 13:46:15 (14080): Required extension pack not installed, remote desktop not enabled.
2025-05-27 13:46:15 (14080): Enabling shared directory for VM.
2025-05-27 13:46:15 (14080): Starting VM using VBoxManage interface. (boinc_1ccd9c96df3fc0b4, slot#3)
2025-05-27 13:46:19 (14080): Successfully started VM. (PID = '22560')
2025-05-27 13:46:19 (14080): Reporting VM Process ID to BOINC.
2025-05-27 13:46:19 (14080): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-27 13:46:19 (14080): Guest Log: CPUID EDX: 0x178bfbff
2025-05-27 13:46:19 (14080): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-27 13:46:19 (14080): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-27 13:46:19 (14080): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-27 13:46:19 (14080): Detected: Web Application Enabled (http://localhost:57594)
2025-05-27 13:46:19 (14080): Preference change detected
2025-05-27 13:46:19 (14080): Setting CPU throttle for VM. (50%)
2025-05-27 13:46:20 (14080): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-27 13:46:22 (14080): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-27 13:46:22 (14080): Guest Log: BIOS: Booting from Hard Disk...
2025-05-27 13:46:25 (14080): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-27 13:46:25 (14080): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-27 13:46:25 (14080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-27 13:46:31 (14080): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-27 13:46:31 (14080): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-27 13:46:35 (14080): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-27 13:46:35 (14080): Guest Log: 00:00:00.000093 main     Log opened 2025-05-27T13:46:32.783465000Z
2025-05-27 13:46:35 (14080): Guest Log: 00:00:00.000148 main     OS Product: Linux
2025-05-27 13:46:35 (14080): Guest Log: 00:00:00.000170 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-27 13:46:35 (14080): Guest Log: 00:00:00.000182 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-27 13:46:35 (14080): Guest Log: 00:00:00.000193 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-27 13:46:35 (14080): Guest Log: 00:00:00.000194 main     Process ID: 1366
2025-05-27 13:46:35 (14080): Guest Log: 00:00:00.000194 main     Package type: LINUX_64BITS_GENERIC
2025-05-27 13:46:35 (14080): Guest Log: 00:00:00.000566 main     5.2.32 r132073 started. Verbose level = 0
2025-05-27 13:46:35 (14080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-27 13:46:35 (14080): Guest Log: [INFO] Mounting shared directory
2025-05-27 13:46:35 (14080): Guest Log: [INFO] Checking for init_data.xml
2025-05-27 13:46:45 (14080): Guest Log: 00:00:10.002023 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 787 823 549 000ns (GuestNow=1 748 324 804 960 909 000 ns GuestLast=1 748 353 592 784 458 000 ns fSetTimeLastLoop=true )
2025-05-27 13:46:57 (14080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-27 13:46:57 (14080): Guest Log: [INFO] Detected branch: prod
2025-05-27 13:46:58 (14080): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-27 13:46:58 (14080): Guest Log: Copying input files
2025-05-27 13:46:59 (14080): Guest Log: Copied input files into RunAtlas.
2025-05-27 13:46:59 (14080): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-27 13:46:59 (14080): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-27 13:46:59 (14080): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-27 13:46:59 (14080): Guest Log: Further information can be found at the LHC@home message board.
2025-05-27 13:47:11 (14080): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-27 13:47:11 (14080): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-27 13:47:11 (14080): Guest Log: 2.6.3.0 1648 0 32040 146469 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-27 13:47:11 (14080): Guest Log: copied the webapp to /var/www
2025-05-27 13:47:11 (14080): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-27 13:47:11 (14080): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-27 13:47:12 (14080): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-27 13:47:12 (14080): Guest Log:  *** Starting ATLAS job. (PandaID=6665732321 taskID=44871837) ***
2025-05-27 15:14:44 (14080): Guest Log:  *** Job finished ***
2025-05-27 15:14:44 (14080): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:33,469 | INFO     | [job] control thread has finished
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:33,501 | INFO     | [payload] run_realtimelog thread has finished
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:35,816 | INFO     | [data] queue_monitor thread has finished
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:37,983 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199235934016)>', '<ExcThread(monitor, started 140198058911488)>']
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:38,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:38,365 | INFO     | [monitor] control thread has ended
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:42,989 | INFO     | all workflow threads have been joined
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:42,989 | INFO     | end of generic workflow (traces error code: 0)
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:42,989 | INFO     | traces error code: 0
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:42,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,025 [wrapper] ==== pilot stdout END ====
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,028 [wrapper] ==== wrapper stdout RESUME ====
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,030 [wrapper] pilotpid: 6021
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,032 [wrapper] Pilot exit status: 0
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,831 [wrapper] pandaids: 6665732321
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,846 [wrapper] cleanup supervisor_pilot 31402 6022
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,849 [wrapper] Test setup, not cleaning
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,851 [wrapper] apfmon messages muted
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,854 [wrapper] ==== wrapper stdout END ====
2025-05-27 15:14:44 (14080): Guest Log: 2025-05-27 07:14:43,856 [wrapper] ==== wrapper stderr END ====
2025-05-27 15:14:44 (14080): Guest Log:  *** Error codes and diagnostics ***
2025-05-27 15:14:44 (14080): Guest Log:     "exeErrorCode": 0,
2025-05-27 15:14:44 (14080): Guest Log:     "exeErrorDiag": "",
2025-05-27 15:14:44 (14080): Guest Log:     "pilotErrorCode": 0,
2025-05-27 15:14:44 (14080): Guest Log:     "pilotErrorDiag": "",
2025-05-27 15:14:44 (14080): Guest Log:  *** Listing of results directory ***
2025-05-27 15:14:44 (14080): Guest Log: total 196928
2025-05-27 15:14:44 (14080): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 25 14:38 pilot3.tar.gz
2025-05-27 15:14:44 (14080): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 25 14:50 queuedata.json
2025-05-27 15:14:44 (14080): Guest Log: -rwx------. 1 atlas atlas     37140 May 25 14:50 runpilot2-wrapper.sh
2025-05-27 15:14:44 (14080): Guest Log: -rwxr-xr-x. 1 atlas atlas      9182 May 27 05:46 init_data.xml
2025-05-27 15:14:44 (14080): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 May 27 05:46 input.tar.gz
2025-05-27 15:14:44 (14080): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 27 05:46 start_atlas.sh
2025-05-27 15:14:44 (14080): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 27 05:46 EVNT.44871834._001446.pool.root.1 -> /data/./ATLAS.root_0
2025-05-27 15:14:44 (14080): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 27 05:47 pandaJob.out
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas    990410 May 27 05:50 agis_schedconf.cvmfs.json
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas   1603667 May 27 05:50 agis_ddmendpoints.agis.ALL.json
2025-05-27 15:14:44 (14080): Guest Log: drwx------. 4 atlas atlas      4096 May 27 05:51 pilot3
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas 196550864 May 27 07:13 HITS.44871837._036251.pool.root.1
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas      1017 May 27 07:14 memory_monitor_summary.json
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas    286377 May 27 07:14 log.44871837._036251.job.log.tgz.1
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas        95 May 27 07:14 pilot_heartbeat.json
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas      7691 May 27 07:14 heartbeat.json
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas      4536 May 27 07:14 pilotlog.txt
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas    377020 May 27 07:14 log.44871837._036251.job.log.1
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas       357 May 27 07:14 output.list
2025-05-27 15:14:44 (14080): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 27 07:14 runtime_log
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas    686080 May 27 07:14 result.tar.gz
2025-05-27 15:14:44 (14080): Guest Log: -rw-r--r--. 1 atlas atlas      8631 May 27 07:14 runtime_log.err
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas       660 May 27 07:14 fiAODm7qRd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxgOKDmWUDwcm.diag
2025-05-27 15:14:44 (14080): Guest Log: Looking for outputfile HITS.44871837._036251.pool.root.1
2025-05-27 15:14:44 (14080): Guest Log: HITS file was successfully produced
2025-05-27 15:14:44 (14080): Guest Log: -rw-------. 1 atlas atlas 196550864 May 27 07:13 /home/atlas/RunAtlas/HITS.44871837._036251.pool.root.1
2025-05-27 15:14:45 (14080): Guest Log: Successfully finished the ATLAS job!
2025-05-27 15:14:45 (14080): Guest Log: Copying the results back to the shared directory!
2025-05-27 15:14:45 (14080): Guest Log:  *** Contents of shared directory: ***
2025-05-27 15:14:45 (14080): Guest Log: total 414480
2025-05-27 15:14:45 (14080): Guest Log: -rwxrwxrwx. 1 root root 226641204 May 27 05:46 ATLAS.root_0
2025-05-27 15:14:45 (14080): Guest Log: -rwxrwxrwx. 1 root root 196550864 May 27 07:14 HITS.pool.root.1
2025-05-27 15:14:45 (14080): Guest Log: -rwxrwxrwx. 1 root root      9182 May 27 05:46 init_data.xml
2025-05-27 15:14:45 (14080): Guest Log: -rwxrwxrwx. 1 root root    508881 May 27 04:17 input.tar.gz
2025-05-27 15:14:45 (14080): Guest Log: -rwxrwxrwx. 1 root root    686080 May 27 07:14 result.tar.gz
2025-05-27 15:14:45 (14080): Guest Log: -rwxrwxrwx. 1 root root     15093 May 27 04:17 start_atlas.sh
2025-05-27 15:14:45 (14080): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-27 15:14:45 (14080): VM Completion File Detected.
2025-05-27 15:14:45 (14080): Powering off VM.
2025-05-27 15:14:46 (14080): Successfully stopped VM.
2025-05-27 15:14:46 (14080): Deregistering VM. (boinc_1ccd9c96df3fc0b4, slot#3)
2025-05-27 15:14:46 (14080): Removing network bandwidth throttle group from VM.
2025-05-27 15:14:46 (14080): Removing VM from VirtualBox.
15:14:51 (14080): called boinc_finish(0)

</stderr_txt>
]]>

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